Citrus Sinensis ID: 033065

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
Protein Sequence
MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLINRFLGFPDD
Secondary Structure (PSIPRED)
cccccccccccccccccEEEEEEEcHHHHHHHHHHccEEEEcccHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHcccEEEEccccHHHHHHccccccccccccccHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccEccccccccccEEEEEEEEccccHHHHHHHccEEEEcccHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHHHcccEEEEcHHHHHHHHHHccHHHccccccccHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mgqgtylpaesigedgllavDCFTFSSSIADHLSSASLVIShagsgsifetlrlgkPLIVVVNEDLMDNHQSELAEELADRkhlycahpqslHQVIVGMdlksllpyqpgdatpVAKLINRFLGFPDD
Flexible Loop (DISEMBL)
mgqgtylpAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLINRFLGFPDD
Low Complexity Region (SEG)
MGQGTYLPAESIGEDGLLAVDCFTFsssiadhlssaslVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLINRFLGFPDD
Disordered region (IsUnstruct)
***********IGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLINRFLGF***
Disordered Region (DISOPRED)
*GQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSL*********PVAKLINRFLGFPD*
Disordered Region (DISEMBL)
MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLINRFLGFPDD
Disordered Region (DISPRO)
****TYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLINRFLGFPD*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLINRFLGFPDD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	128	2.2.26 [Sep-21-2011]
Q5I0K7	165	UDP-N-acetylglucosamine t	yes	no	0.960	0.745	0.392	1e-18
Q9D8C3	1166	UDP-N-acetylglucosamine t	no	no	0.664	0.072	0.477	4e-15
Q9NP73	1137	UDP-N-acetylglucosamine t	no	no	0.664	0.074	0.465	4e-15
Q6C3P1	196	UDP-N-acetylglucosamine t	yes	no	0.578	0.377	0.472	1e-14
O14190	162	UDP-N-acetylglucosamine t	yes	no	0.804	0.635	0.407	7e-14
Q5ABE5	293	UDP-N-acetylglucosamine t	N/A	no	0.539	0.235	0.464	5e-13
Q6BST1	212	UDP-N-acetylglucosamine t	yes	no	0.562	0.339	0.469	2e-12
P53178	202	UDP-N-acetylglucosamine t	yes	no	0.585	0.371	0.460	4e-12
Q6CXY0	197	UDP-N-acetylglucosamine t	yes	no	0.539	0.350	0.485	8e-12
Q4WQN1	197	UDP-N-acetylglucosamine t	yes	no	0.484	0.314	0.548	1e-11

>sp|Q5I0K7|ALG13_RAT UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Rattus norvegicus GN=Alg13 PE=1 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 2/125 (1%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
           +G+GT +P     E     +D + +  S+ + L  A LVISHAG+GS  E+L  GKPL+V
Sbjct: 41  IGRGTVVPEPFSTEP--FTLDVYRYKESLKEDLQQADLVISHAGAGSCLESLEKGKPLVV 98

Query: 61  VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
           VVNE LM+NHQ ELA++L    HL+      L  ++  MDL +L  Y PG     +  ++
Sbjct: 99  VVNEKLMNNHQFELAKQLHKEGHLFYCTCSMLPGLLQSMDLSTLKCYPPGQPEKFSAFLD 158

Query: 121 RFLGF 125
           + +G 
Sbjct: 159 KVVGL 163

May be involved in protein N-glycosylation, second step of the dolichol-linked oligosaccharide pathway.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4EC: 1

>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus musculus GN=Alg13 PE=2 SV=2

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
           +G+GT +P     E     +D + +  S+ + L  A LVISHAG+GS  E+L  GKPL+V
Sbjct: 41  VGRGTVVPKPFRTES--FTLDVYRYKDSLKEDLQQADLVISHAGAGSCLESLEKGKPLVV 98

Query: 61  VVNEDLMDNHQSELAEELADRKHL-YCA 87
           VVNE LM+NHQ ELA++L    HL YC 
Sbjct: 99  VVNEKLMNNHQFELAKQLHKEGHLFYCT 126

Isoform 2 may be involved in protein N-glycosylation, second step of the dolichol-linked oligosaccharide pathway (By. similarity).

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo sapiens GN=ALG13 PE=1 SV=2

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
           +G+GT +P     E     +D + +  S+ + +  A LVISHAG+GS  ETL  GKPL+V
Sbjct: 41  IGRGTVVPEPFSTES--FTLDVYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVV 98

Query: 61  VVNEDLMDNHQSELAEELADRKHL-YCA 87
           V+NE LM+NHQ ELA++L    HL YC 
Sbjct: 99  VINEKLMNNHQLELAKQLHKEGHLFYCT 126

Isoform 2 may be involved in protein N-glycosylation, second step of the dolichol-linked oligosaccharide pathway.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q6C3P1|ALG13_YARLI UDP-N-acetylglucosamine transferase subunit ALG13 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ALG13 PE=3 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 54/74 (72%)

Query: 14  EDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSE 73
           ++G++++  F ++  +A  +S A LVISHAG+GS+ + LR+GK  +VVVN  LMDNHQ E
Sbjct: 81  KEGVMSITGFEYTDDLAGEMSRAHLVISHAGTGSVLDALRIGKHPVVVVNSKLMDNHQIE 140

Query: 74  LAEELADRKHLYCA 87
           +AEEL  ++HL  +
Sbjct: 141 IAEELFRKRHLLVS 154

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|O14190|ALG13_SCHPO UDP-N-acetylglucosamine transferase subunit alg13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg13 PE=3 SV=1

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 61/103 (59%)

Query: 18  LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEE 77
           L +  F ++  I  ++  AS+VISHAG+GSI +TLR GK L+VV NE LMDNHQ ELA +
Sbjct: 56  LTILGFDYAPEIESYIHDASIVISHAGAGSILQTLRSGKRLLVVPNESLMDNHQVELATK 115

Query: 78  LADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
           LA   +L      +L + +  +  K L P+   D +   K++ 
Sbjct: 116 LASMNYLVTCSTSNLVEGLEELYPKILTPFPKSDCSTFQKVMQ 158

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q5ABE5|ALG13_CANAL UDP-N-acetylglucosamine transferase subunit ALG13 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ALG13 PE=3 SV=1

 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 50/71 (70%), Gaps = 2/71 (2%)

Query: 18  LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEE 77
           + +  F++SS+I  ++ +  L+ISHAG+GSI + L L KPLIV+VN+ LMDNHQ E+A++
Sbjct: 169 IEILAFSYSSNINKYIENVDLIISHAGTGSIIDCLHLNKPLIVIVNDKLMDNHQLEIAQQ 228

Query: 78  LADRKHLYCAH 88
               K  YC +
Sbjct: 229 FT--KLNYCIY 237

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q6BST1|ALG13_DEBHA UDP-N-acetylglucosamine transferase subunit ALG13 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ALG13 PE=3 SV=2

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 9/81 (11%)

Query: 23  FTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRK 82
           F FS+ I   +S + +VISHAG+GSI +TLRL KPLIVV N+ LM+ HQ E+A+EL    
Sbjct: 103 FPFSNDIGSFISESDVVISHAGTGSIIDTLRLEKPLIVVTNDKLMNKHQEEVADELV--- 159

Query: 83  HLYCAHPQSLHQVIVGMDLKS 103
            L C    ++       D+KS
Sbjct: 160 KLGCCRKMTIE------DMKS 174

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|P53178|ALG13_YEAST UDP-N-acetylglucosamine transferase subunit ALG13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALG13 PE=1 SV=1

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 1/76 (1%)

Query: 15  DGLLAVDCFTFSSSIADHLSSAS-LVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSE 73
           +G L V  F FS+ +   +   S LVISHAG+GSI ++LRL KPLIV VN+ LMDNHQ +
Sbjct: 89  NGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQ 148

Query: 74  LAEELADRKHLYCAHP 89
           +A++  +  +++   P
Sbjct: 149 IADKFVELGYVWSCAP 164

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q6CXY0|ALG13_KLULA UDP-N-acetylglucosamine transferase subunit ALG13 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ALG13 PE=3 SV=1

 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 23  FTFSSSIADHLSS-ASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR 81
           F FS  I   +++   LVISHAG+GSI ++LR+GK LIVVVN+ LMDNHQ  +A++   +
Sbjct: 92  FEFSHDIEKLIANNIDLVISHAGTGSILDSLRVGKKLIVVVNDTLMDNHQQLIADKFEQQ 151

Query: 82  KHLYCAHPQS 91
           K L+  H  +
Sbjct: 152 KLLWSVHANT 161

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q4WQN1|ALG13_ASPFU UDP-N-acetylglucosamine transferase subunit alg13 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=alg13 PE=3 SV=2

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 43/62 (69%)

Query: 35  SASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQ 94
           S  LVISHAGSG+I E LR+G PLIVV N  L DNHQ ELA +L  + ++  +H Q+L Q
Sbjct: 97  SGGLVISHAGSGTILEVLRMGIPLIVVPNPSLQDNHQEELARQLQKQGYVVASHYQNLCQ 156

Query: 95  VI 96
            +
Sbjct: 157 AL 158

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	128
351725986	175	uncharacterized protein LOC100527305 [Gl	1.0	0.731	0.843	3e-56
224131498	179	predicted protein [Populus trichocarpa]	1.0	0.715	0.828	2e-55
255542566	178	UDP-N-acetylglucosamine transferase subu	1.0	0.719	0.820	2e-55
147779009	169	hypothetical protein VITISV_015184 [Viti	1.0	0.757	0.812	4e-55
359496479	178	PREDICTED: UDP-N-acetylglucosamine trans	1.0	0.719	0.804	2e-54
359487723	178	PREDICTED: LOW QUALITY PROTEIN: UDP-N-ac	1.0	0.719	0.804	4e-54
351721001	177	uncharacterized protein LOC100526989 [Gl	0.992	0.717	0.835	7e-54
388490484	177	unknown [Lotus japonicus]	0.992	0.717	0.820	5e-53
388499422	177	unknown [Lotus japonicus]	0.992	0.717	0.812	1e-52
449435693	177	PREDICTED: UDP-N-acetylglucosamine trans	0.992	0.717	0.796	1e-52

>gi|351725986|ref|NP_001237879.1| uncharacterized protein LOC100527305 [Glycine max] gi|255632049|gb|ACU16377.1| unknown [Glycine max]

 Score =  222 bits (566), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 108/128 (84%), Positives = 115/128 (89%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
           MG+G+YLP +S G+D  LAVD FTFSSSIADHL SASLVISHAGSGSIFETLRLGKPL+V
Sbjct: 48  MGRGSYLPTKSEGDDCSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRLGKPLVV 107

Query: 61  VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
           VVN+DLMDNHQSELAEELADRKHLYCA PQ+LHQ I  MDL SLLPY PGDATPVAK IN
Sbjct: 108 VVNQDLMDNHQSELAEELADRKHLYCASPQTLHQTIADMDLSSLLPYSPGDATPVAKHIN 167

Query: 121 RFLGFPDD 128
           RFLGFPDD
Sbjct: 168 RFLGFPDD 175

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131498|ref|XP_002328554.1| predicted protein [Populus trichocarpa] gi|222838269|gb|EEE76634.1| predicted protein [Populus trichocarpa]

 Score =  220 bits (560), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 106/128 (82%), Positives = 116/128 (90%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
           MG+G+Y PA+S G+DG LAVD FTFS SIADHL SASLVISHAGSGSIFETL+LGKPLIV
Sbjct: 52  MGRGSYTPAKSEGKDGSLAVDYFTFSPSIADHLRSASLVISHAGSGSIFETLQLGKPLIV 111

Query: 61  VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
           VVNEDLMDNHQSELAEELA+RKHLYCAHPQ+LHQ I  M+++SLLPY PGDA  VAKLIN
Sbjct: 112 VVNEDLMDNHQSELAEELAERKHLYCAHPQTLHQTISDMNIESLLPYPPGDAAAVAKLIN 171

Query: 121 RFLGFPDD 128
           RFLGFPDD
Sbjct: 172 RFLGFPDD 179

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542566|ref|XP_002512346.1| UDP-N-acetylglucosamine transferase subunit alg13, putative [Ricinus communis] gi|223548307|gb|EEF49798.1| UDP-N-acetylglucosamine transferase subunit alg13, putative [Ricinus communis]

 Score =  219 bits (559), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 105/128 (82%), Positives = 114/128 (89%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
           MG+G+Y P ++ GEDG LAVD FTFSSSIADHL SASLVISHAGSGSIFETLRL KPLIV
Sbjct: 51  MGRGSYTPTKTEGEDGSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRLQKPLIV 110

Query: 61  VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
           VVNEDLMDNHQSELAEELA+RK+LYCA PQ+LH +I  MDL+SLLPY  GDATPV KLIN
Sbjct: 111 VVNEDLMDNHQSELAEELAERKYLYCARPQTLHHIIADMDLESLLPYSAGDATPVVKLIN 170

Query: 121 RFLGFPDD 128
           RFLGFPDD
Sbjct: 171 RFLGFPDD 178

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147779009|emb|CAN71397.1| hypothetical protein VITISV_015184 [Vitis vinifera]

 Score =  218 bits (556), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 104/128 (81%), Positives = 115/128 (89%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
           MG+G+Y+P +S GEDG L VD FTFSSSIAD+L SASLVISHAGSGSIFETLRL KPLIV
Sbjct: 42  MGRGSYIPTKSTGEDGSLVVDFFTFSSSIADNLRSASLVISHAGSGSIFETLRLRKPLIV 101

Query: 61  VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
           VVNEDLMDNHQSELAEELA+RKHL+CA PQ+L+Q I  M+L+SLLPY PGDA PVAKLIN
Sbjct: 102 VVNEDLMDNHQSELAEELAERKHLFCARPQTLYQTIATMNLESLLPYHPGDAAPVAKLIN 161

Query: 121 RFLGFPDD 128
           RFLGFPDD
Sbjct: 162 RFLGFPDD 169

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496479|ref|XP_002265906.2| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Vitis vinifera] gi|296080958|emb|CBI18624.3| unnamed protein product [Vitis vinifera]

 Score =  216 bits (550), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 103/128 (80%), Positives = 113/128 (88%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
           MG+G+Y P +S GEDG L VD F FSSSIAD+L SASLVISHAGSGSIFETLRL KPLIV
Sbjct: 51  MGRGSYFPKKSTGEDGSLVVDYFIFSSSIADNLRSASLVISHAGSGSIFETLRLRKPLIV 110

Query: 61  VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
           VVNEDLMDNHQSELAEELA+RKHL+CAHPQ+L Q +  M+L+SLLPY PGDA PVAKLIN
Sbjct: 111 VVNEDLMDNHQSELAEELAERKHLFCAHPQTLFQTVASMNLESLLPYHPGDAAPVAKLIN 170

Query: 121 RFLGFPDD 128
           RFLGFPDD
Sbjct: 171 RFLGFPDD 178

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487723|ref|XP_003633637.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Vitis vinifera]

 Score =  215 bits (548), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 103/128 (80%), Positives = 114/128 (89%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
           MG+G+Y+P +S GEDG L VD FTFSSSIAD+L SASLVISHAGSGSIFETLRL KPLIV
Sbjct: 51  MGRGSYIPTKSTGEDGSLVVDFFTFSSSIADNLRSASLVISHAGSGSIFETLRLRKPLIV 110

Query: 61  VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
           VVNEDLMDNHQSELAEELA+RKHL+CA PQ+L+Q I  M+L+SLLPY PGDA  VAKLIN
Sbjct: 111 VVNEDLMDNHQSELAEELAERKHLFCARPQTLYQTIATMNLESLLPYTPGDAAAVAKLIN 170

Query: 121 RFLGFPDD 128
           RFLGFPDD
Sbjct: 171 RFLGFPDD 178

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721001|ref|NP_001236939.1| uncharacterized protein LOC100526989 [Glycine max] gi|255631316|gb|ACU16025.1| unknown [Glycine max]

 Score =  214 bits (546), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 107/128 (83%), Positives = 112/128 (87%), Gaps = 1/128 (0%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
           MG+G+YLP +S G DG LAVD FTFSSSIADHL SASLVISHAGSGSIFETL+LGKPLIV
Sbjct: 51  MGRGSYLPTKSEG-DGSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLQLGKPLIV 109

Query: 61  VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
           VVNEDLMDNHQSELAEELADRKHLYCA PQ+LHQ I  MDL SL PY PGDATPVAK IN
Sbjct: 110 VVNEDLMDNHQSELAEELADRKHLYCASPQTLHQTIANMDLSSLFPYSPGDATPVAKHIN 169

Query: 121 RFLGFPDD 128
             LGFPDD
Sbjct: 170 NLLGFPDD 177

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388490484|gb|AFK33308.1| unknown [Lotus japonicus]

 Score =  212 bits (539), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 105/128 (82%), Positives = 113/128 (88%), Gaps = 1/128 (0%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
           MG+G+Y+P +S G DG LAVD FTFSSSIADHL SASLVISHAGSGSIFETLRLGKPL+V
Sbjct: 51  MGRGSYVPTKSEG-DGSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRLGKPLLV 109

Query: 61  VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
           VVNEDLMDNHQSEL EELA+RKHLYCA PQ++ Q I  MDL SLLPY PGDATPVAK IN
Sbjct: 110 VVNEDLMDNHQSELVEELANRKHLYCASPQTILQTIADMDLNSLLPYSPGDATPVAKHIN 169

Query: 121 RFLGFPDD 128
           RFLGFPDD
Sbjct: 170 RFLGFPDD 177

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499422|gb|AFK37777.1| unknown [Lotus japonicus]

 Score =  211 bits (536), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 104/128 (81%), Positives = 114/128 (89%), Gaps = 1/128 (0%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
           MG+G+Y+P +S G DG LAVD FTFSSSIADHL SASLVISHAGSGSIFE+LRLGKPL+V
Sbjct: 51  MGRGSYVPNKSEG-DGSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFESLRLGKPLLV 109

Query: 61  VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
           VVNEDLMDNHQSELAEELA+RKHLYCA PQ++ Q I  MDL SLLPY PGDATPVAK IN
Sbjct: 110 VVNEDLMDNHQSELAEELANRKHLYCASPQTILQTIADMDLNSLLPYSPGDATPVAKHIN 169

Query: 121 RFLGFPDD 128
           RFLGFP+D
Sbjct: 170 RFLGFPED 177

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435693|ref|XP_004135629.1| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Cucumis sativus] gi|449526666|ref|XP_004170334.1| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Cucumis sativus]

 Score =  211 bits (536), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 102/128 (79%), Positives = 114/128 (89%), Gaps = 1/128 (0%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
           MG+GTY P +S GEDGL+ VD F+FSSSIADHL SASLVISHAGSGSIFETLRLGKPLIV
Sbjct: 51  MGRGTYNPTKSHGEDGLV-VDYFSFSSSIADHLKSASLVISHAGSGSIFETLRLGKPLIV 109

Query: 61  VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
           VVNEDLMDNHQ ELAEELA+RKHLYCA PQ+LHQ I  ++L+S++PY PGDA PVA LIN
Sbjct: 110 VVNEDLMDNHQIELAEELAERKHLYCARPQTLHQTIESLNLESIIPYTPGDAKPVAALIN 169

Query: 121 RFLGFPDD 128
           RFLGFP+D
Sbjct: 170 RFLGFPED 177

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	128
TAIR|locus:2129071	176	AT4G16710 [Arabidopsis thalian	1.0	0.727	0.632	3.7e-39
UNIPROTKB|F1NRT1	165	Gga.11386 "Uncharacterized pro	0.953	0.739	0.412	1.7e-18
ZFIN|ZDB-GENE-040718-161	164	zgc:92907 "zgc:92907" [Danio r	0.937	0.731	0.412	8.6e-17
RGD|1359416	165	Alg13 "asparagine-linked glyco	0.953	0.739	0.362	9.8e-16
UNIPROTKB|E2RPL3	165	LOC100856287 "Uncharacterized	0.953	0.739	0.354	4.2e-15
UNIPROTKB|K7GM15	165	K7GM15 "Uncharacterized protei	0.953	0.739	0.338	2.3e-14
UNIPROTKB|F1MU60	165	F1MU60 "Uncharacterized protei	0.953	0.739	0.346	4.9e-14
UNIPROTKB|D6RE84	222	ALG13 "UDP-N-acetylglucosamine	0.656	0.378	0.436	4.4e-13
POMBASE|SPAC56E4.02c	162	alg13 "N-acetylglucosaminyldip	0.632	0.5	0.456	2.4e-12
UNIPROTKB|Q9NP73	1137	ALG13 "UDP-N-acetylglucosamine	0.656	0.073	0.436	1.2e-11

TAIR|locus:2129071 AT4G16710 [Arabidopsis thaliana (taxid:3702)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 81/128 (63%), Positives = 92/128 (71%)

Query:     1 MGQGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIV 60
             MG+G + P +  G DG L VD FTF             VISHAGSGSIFETL+LGKPLIV
Sbjct:    49 MGRGIFFPTKCDGADGSLVVDYFTFSSSIADYIRSASLVISHAGSGSIFETLKLGKPLIV 108

Query:    61 VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
             VVNEDLMDNHQ ELAE L +RKHLY   P SLHQ +  M+L SL+ Y PGD TPVA++I+
Sbjct:   109 VVNEDLMDNHQCELAEALEERKHLYYTRPHSLHQTLTKMELGSLVQYTPGDGTPVARIID 168

Query:   121 RFLGFPDD 128
             RFLGFPDD
Sbjct:   169 RFLGFPDD 176

GO:0005886 "plasma membrane" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

UNIPROTKB|F1NRT1 Gga.11386 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 52/126 (41%), Positives = 68/126 (53%)

Query:     1 MGQGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIV 60
             +G+G   PA   G       D F F             VISHAG+GS  ETL  GKPL+V
Sbjct:    42 IGRGALQPAPQYGP--AFVRDVFRFKESLAEDLRRADLVISHAGAGSCLETLEEGKPLLV 99

Query:    61 VVNEDLMDNHQSELAEELADRKH-LYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLI 119
             V+NE LMDNHQ ELA +L    H LYC +  +L + +  MDL +L P+ PG     A  +
Sbjct:   100 VINEKLMDNHQLELARQLHKDGHVLYC-NCSTLVETLQSMDLSTLKPFPPGQPEKFALFL 158

Query:   120 NRFLGF 125
             ++ +GF
Sbjct:   159 DKVVGF 164

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

ZFIN|ZDB-GENE-040718-161 zgc:92907 "zgc:92907" [Danio rerio (taxid:7955)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 52/126 (41%), Positives = 70/126 (55%)

Query:     1 MGQGTYLP-AESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLI 59
             +G+G+ +P  ES    GL  +  F F             VISHAG+GS  E L   KPL+
Sbjct:    41 VGRGSVVPDPESC--PGL-KLQVFRFKDSIAEDMRHSDLVISHAGAGSCLEALGANKPLL 97

Query:    60 VVVNEDLMDNHQSELAEELADRKHL-YCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKL 118
             VVVN+ LMDNHQ ELA +L    HL YC    +L Q +  MDL +L P+ PG+    AK 
Sbjct:    98 VVVNDKLMDNHQLELARQLQTDSHLIYCTC-STLPQTLREMDLTTLRPFAPGEPQNFAKF 156

Query:   119 INRFLG 124
             +++ +G
Sbjct:   157 LDKAIG 162

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

RGD|1359416 Alg13 "asparagine-linked glycosylation 13" [Rattus norvegicus (taxid:10116)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 45/124 (36%), Positives = 66/124 (53%)

Query:     1 MGQGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIV 60
             +G+GT +P     E     +D + +             VISHAG+GS  E+L  GKPL+V
Sbjct:    41 IGRGTVVPEPFSTEP--FTLDVYRYKESLKEDLQQADLVISHAGAGSCLESLEKGKPLVV 98

Query:    61 VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
             VVNE LM+NHQ ELA++L    HL+      L  ++  MDL +L  Y PG     +  ++
Sbjct:    99 VVNEKLMNNHQFELAKQLHKEGHLFYCTCSMLPGLLQSMDLSTLKCYPPGQPEKFSAFLD 158

Query:   121 RFLG 124
             + +G
Sbjct:   159 KVVG 162

GO:0004577 "N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

UNIPROTKB|E2RPL3 LOC100856287 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 44/124 (35%), Positives = 68/124 (54%)

Query:     1 MGQGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIV 60
             +G+G  +P E +  +   A+D + +             VISHAG+GS  ETL   KPL+V
Sbjct:    41 IGRGKVVP-EPLSTESF-ALDVYRYKDSLEEDLQKADLVISHAGAGSCLETLEKRKPLVV 98

Query:    61 VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
             VVNE LM+NHQ ELA++L    HL+     +L  ++  MDL +L  + PG     +  ++
Sbjct:    99 VVNEKLMNNHQLELAKQLHKDGHLFYCTCSTLPGLLQSMDLSTLKCFPPGQPEKFSAFLD 158

Query:   121 RFLG 124
             + +G
Sbjct:   159 KVVG 162

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

UNIPROTKB|K7GM15 K7GM15 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 42/124 (33%), Positives = 66/124 (53%)

Query:     1 MGQGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIV 60
             +G+G  +P E    +    +D + +             VISHAG+GS  ETL   KPL+V
Sbjct:    41 IGRGKVVP-EPFSTESF-TLDVYRYKDSLKEDLQKADLVISHAGAGSCLETLEKRKPLVV 98

Query:    61 VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
             V+NE LM+NHQ ELA++L    HL+     +L  ++  MDL +L  + PG     +  ++
Sbjct:    99 VINEKLMNNHQLELAKQLHKDGHLFYCTCSTLPGLLQSMDLSTLKCFPPGQPEKFSAFLD 158

Query:   121 RFLG 124
             + +G
Sbjct:   159 KVVG 162

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

UNIPROTKB|F1MU60 F1MU60 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 43/124 (34%), Positives = 65/124 (52%)

Query:     1 MGQGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIV 60
             +G+G  +P E    +    +D + +             VISHAG+GS  ETL   KPLIV
Sbjct:    41 IGRGKVVP-EPFSTESF-TLDVYRYKDSLKEDLQKADLVISHAGAGSCLETLEKRKPLIV 98

Query:    61 VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
             V+NE LM+NHQ ELA++L    HL+      L  ++  MDL +L  + PG     +  ++
Sbjct:    99 VINERLMNNHQLELAKQLHKDGHLFYCTCSMLPGLLQSMDLSTLNCFPPGQPEKFSAFLD 158

Query:   121 RFLG 124
             + +G
Sbjct:   159 KVVG 162

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

UNIPROTKB|D6RE84 ALG13 "UDP-N-acetylglucosamine transferase subunit ALG13 homolog" [Homo sapiens (taxid:9606)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 38/87 (43%), Positives = 51/87 (58%)

Query:     1 MGQGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIV 60
             +G+GT +P E    +    +D + +             VISHAG+GS  ETL  GKPL+V
Sbjct:    41 IGRGTVVP-EPFSTESF-TLDVYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVV 98

Query:    61 VVNEDLMDNHQSELAEELADRKHL-YC 86
             V+NE LM+NHQ ELA++L    HL YC
Sbjct:    99 VINEKLMNNHQLELAKQLHKEGHLFYC 125

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

POMBASE|SPAC56E4.02c alg13 "N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase Alg13 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 37/81 (45%), Positives = 50/81 (61%)

Query:    39 VISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVG 98
             VISHAG+GSI +TLR GK L+VV NE LMDNHQ ELA +LA   +L      +L + +  
Sbjct:    77 VISHAGAGSILQTLRSGKRLLVVPNESLMDNHQVELATKLASMNYLVTCSTSNLVEGLEE 136

Query:    99 MDLKSLLPYQPGDATPVAKLI 119
             +  K L P+   D +   K++
Sbjct:   137 LYPKILTPFPKSDCSTFQKVM 157

GO:0004577 "N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity" evidence=ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=ISO

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

UNIPROTKB|Q9NP73 ALG13 "UDP-N-acetylglucosamine transferase subunit ALG13 homolog" [Homo sapiens (taxid:9606)]

 Score = 172 (65.6 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 38/87 (43%), Positives = 51/87 (58%)

Query:     1 MGQGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIV 60
             +G+GT +P E    +    +D + +             VISHAG+GS  ETL  GKPL+V
Sbjct:    41 IGRGTVVP-EPFSTESF-TLDVYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVV 98

Query:    61 VVNEDLMDNHQSELAEELADRKHL-YC 86
             V+NE LM+NHQ ELA++L    HL YC
Sbjct:    99 VINEKLMNNHQLELAKQLHKEGHLFYC 125

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0004577 "N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=TAS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.766
4th Layer	2.4.1.141	0.824

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_scaffold_70000216	hypothetical protein (179 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.01460030	transferase, transferring glycosyl groups (EC-2.4.1.142) (481 aa)						•	•		0.924
	gw1.XVI.1421.1	hypothetical protein (391 aa)					•	•	•		0.913
	estExt_fgenesh4_pg.C_LG_I2082	hypothetical protein (233 aa)					•	•	•		0.418

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	128
pfam04101	167	pfam04101, Glyco_tran_28_C, Glycosyltransferase fa	1e-24
COG5017	161	COG5017, COG5017, Uncharacterized conserved protei	2e-17
COG0707	357	COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acety	3e-09
cd03785	350	cd03785, GT1_MurG, MurG is an N-acetylglucosaminyl	1e-06
PRK00726	357	PRK00726, murG, undecaprenyldiphospho-muramoylpent	5e-05
COG1819	406	COG1819, COG1819, Glycosyl transferases, related t	2e-04
TIGR00661	321	TIGR00661, MJ1255, conserved hypothetical protein	7e-04
pfam13528	317	pfam13528, Glyco_trans_1_3, Glycosyl transferase f	7e-04
cd03784	401	cd03784, GT1_Gtf_like, This family includes the Gt	0.002
PRK12446	352	PRK12446, PRK12446, undecaprenyldiphospho-muramoyl	0.003
TIGR01133	348	TIGR01133, murG, undecaprenyldiphospho-muramoylpen	0.004

>gnl|CDD|217893 pfam04101, Glyco_tran_28_C, Glycosyltransferase family 28 C-terminal domain

 Score = 92.0 bits (229), Expect = 1e-24
 Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
            G+  Y P         + V+ F F  ++A+++ +A LVIS AG+G+I E L LGKP I+
Sbjct: 38  TGKSDYEPVNCKYSKFGINVEVFPFIDNMAEYIKAADLVISRAGAGTIAELLALGKPAIL 97

Query: 61  VVNE----DLMDNHQSELAEELADRKHLY-CAHPQSLHQVIVGMDLKSLLPYQPGDATPV 115
           V       +  DN+  EL +  A    L     P+ L + ++ + LK L  Y+   A   
Sbjct: 98  VPRPKAAGEHQDNNALELVKAGAALVLLQKELTPEKLVEALLKLLLKPLRLYEMNKAAKG 157

Query: 116 AKL 118
           ++L
Sbjct: 158 SRL 160

The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site. Length = 167

>gnl|CDD|227350 COG5017, COG5017, Uncharacterized conserved protein [Function unknown]

 Score = 73.0 bits (179), Expect = 2e-17
 Identities = 37/95 (38%), Positives = 46/95 (48%), Gaps = 10/95 (10%)

Query: 2   GQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVV 61
           G G   P         L V  F     I   +  A +VISHAG GSI   LRL KPLIVV
Sbjct: 38  GNGDIKPVAG------LRVYGFDKEEKIQSLIHDARIVISHAGEGSILLLLRLDKPLIVV 91

Query: 62  VNE----DLMDNHQSELAEELADRKHLYCAHPQSL 92
                  +L+D+HQ ELA +LA+  ++    P  L
Sbjct: 92  PRSSQYQELVDDHQVELALKLAEINYVVACSPTEL 126

Length = 161

>gnl|CDD|223779 COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

 Score = 53.1 bits (128), Expect = 3e-09
 Identities = 25/67 (37%), Positives = 32/67 (47%)

Query: 16  GLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELA 75
            L  V    F   +A  L++A LVIS AG+ +I E L LG P I+V      D HQ   A
Sbjct: 233 ELGVVRVLPFIDDMAALLAAADLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNA 292

Query: 76  EELADRK 82
           + L    
Sbjct: 293 KFLEKAG 299

Length = 357

>gnl|CDD|99961 cd03785, GT1_MurG, MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

 Score = 45.5 bits (109), Expect = 1e-06
 Identities = 23/80 (28%), Positives = 38/80 (47%)

Query: 2   GQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVV 61
           G+G     +   E+  +  + F F   +A   ++A LVIS AG+ ++ E   LG P I++
Sbjct: 219 GKGDLEEVKKAYEELGVNYEVFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILI 278

Query: 62  VNEDLMDNHQSELAEELADR 81
                 D+HQ+  A  L   
Sbjct: 279 PLPYAADDHQTANARALVKA 298

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 350

>gnl|CDD|234825 PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

 Score = 40.9 bits (97), Expect = 5e-05
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 8/71 (11%)

Query: 15  DGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVV----VNEDLMDNH 70
              +  +   F   +A   ++A LVI  AG+ ++ E    G P I+V          D+H
Sbjct: 232 AAGINAEVVPFIDDMAAAYAAADLVICRAGASTVAELAAAGLPAILVPLPHAA----DDH 287

Query: 71  QSELAEELADR 81
           Q+  A  L D 
Sbjct: 288 QTANARALVDA 298

Length = 357

>gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 33  LSSASLVISHAGSGSIFETLRLGKPLIVV-VNEDLMDN 69
           L  A  VI H G+G+  E L  G PL+V+    D   N
Sbjct: 298 LPRADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPLN 335

Length = 406

>gnl|CDD|233077 TIGR00661, MJ1255, conserved hypothetical protein

 Score = 37.5 bits (87), Expect = 7e-04
 Identities = 16/30 (53%), Positives = 20/30 (66%)

Query: 32  HLSSASLVISHAGSGSIFETLRLGKPLIVV 61
            + +A LVI+H G   I E L LGKPLIV+
Sbjct: 244 LIKNAELVITHGGFSLISEALSLGKPLIVI 273

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases [Hypothetical proteins, Conserved]. Length = 321

>gnl|CDD|222200 pfam13528, Glyco_trans_1_3, Glycosyl transferase family 1

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 31  DHLSSASLVISHAGSGSIFETLRLGKPLIVVVNED 65
             L+  S VI +AG   + E L LGKPL++V  + 
Sbjct: 245 RDLAECSAVICNAGFELLSEALYLGKPLLLVPLDG 279

Length = 317

>gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 33  LSSASLVISHAGSGSIFETLRLGKPLIVV 61
           L   + V+ H G+G+    LR G P +VV
Sbjct: 302 LPRCAAVVHHGGAGTTAAALRAGVPQLVV 330

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401

>gnl|CDD|171505 PRK12446, PRK12446, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

 Score = 36.0 bits (83), Expect = 0.003
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 31  DHLSSASLVISHAGSGSIFETLRLGKPLIVV 61
           D L+    VIS AGS +IFE L L KP++++
Sbjct: 248 DILAITDFVISRAGSNAIFEFLTLQKPMLLI 278

Length = 352

>gnl|CDD|233284 TIGR01133, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

 Score = 35.3 bits (82), Expect = 0.004
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 7/67 (10%)

Query: 18  LAVDCFT--FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLM--DNHQSE 73
           L ++        ++A   ++A LVIS AG+ ++ E    G P I++         + Q  
Sbjct: 231 LGIEAIVTFIDENMAAAYAAADLVISRAGASTVAELAAAGVPAILI---PYPYAADDQYY 287

Query: 74  LAEELAD 80
            A+ L D
Sbjct: 288 NAKFLED 294

RM 8449890 RT The final step of peptidoglycan subunit assembly in Escherichia coli occurs in the cytoplasm. RA Bupp K, van Heijenoort J. RL J Bacteriol 1993 Mar;175(6):1841-3 [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. Length = 348

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	128
KOG3349	170	consensus Predicted glycosyltransferase [General f	99.91
PF04101	167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	99.88
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	99.86
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	99.75
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	99.71
COG5017	161	Uncharacterized conserved protein [Function unknow	99.69
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	99.65
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	99.63
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	99.62
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	99.59
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	99.57
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.57
COG4671	400	Predicted glycosyl transferase [General function p	99.55
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	99.53
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	99.52
PLN02605	382	monogalactosyldiacylglycerol synthase	99.48
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.41
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	99.41
TIGR03492	396	conserved hypothetical protein. This protein famil	99.39
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	99.36
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	99.3
PLN03004	451	UDP-glycosyltransferase	99.29
PLN02670	472	transferase, transferring glycosyl groups	99.29
PLN02210	456	UDP-glucosyl transferase	99.29
PLN02554	481	UDP-glycosyltransferase family protein	99.27
PLN02562	448	UDP-glycosyltransferase	99.27
PLN02448	459	UDP-glycosyltransferase family protein	99.26
PLN03007	482	UDP-glucosyltransferase family protein	99.26
PLN02992	481	coniferyl-alcohol glucosyltransferase	99.26
PLN02207	468	UDP-glycosyltransferase	99.26
PLN02173	449	UDP-glucosyl transferase family protein	99.25
PLN02152	455	indole-3-acetate beta-glucosyltransferase	99.23
PLN02208	442	glycosyltransferase family protein	99.23
PLN02555	480	limonoid glucosyltransferase	99.22
PLN02764	453	glycosyltransferase family protein	99.2
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	99.19
PLN00414	446	glycosyltransferase family protein	99.19
PLN00164	480	glucosyltransferase; Provisional	99.17
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.15
PLN02167	475	UDP-glycosyltransferase family protein	99.15
KOG1192	496	consensus UDP-glucuronosyl and UDP-glucosyl transf	99.11
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.09
PLN02534	491	UDP-glycosyltransferase	98.99
PLN03015	470	UDP-glucosyl transferase	98.98
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	98.94
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	98.92
PRK14089	347	ipid-A-disaccharide synthase; Provisional	98.53
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	98.47
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	98.16
cd03808	359	GT1_cap1E_like This family is most closely related	98.08
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	98.07
cd03814	364	GT1_like_2 This family is most closely related to	98.0
cd03801	374	GT1_YqgM_like This family is most closely related	97.98
cd03823	359	GT1_ExpE7_like This family is most closely related	97.98
cd03820	348	GT1_amsD_like This family is most closely related	97.94
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	97.93
cd03807	365	GT1_WbnK_like This family is most closely related	97.9
cd04951	360	GT1_WbdM_like This family is most closely related	97.84
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	97.83
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	97.79
cd03819	355	GT1_WavL_like This family is most closely related	97.74
cd03821	375	GT1_Bme6_like This family is most closely related	97.73
cd03795	357	GT1_like_4 This family is most closely related to	97.72
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	97.69
cd03798	377	GT1_wlbH_like This family is most closely related	97.68
cd04962	371	GT1_like_5 This family is most closely related to	97.65
cd03794	394	GT1_wbuB_like This family is most closely related	97.62
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	97.62
cd03812	358	GT1_CapH_like This family is most closely related	97.62
cd03817	374	GT1_UGDG_like This family is most closely related	97.6
cd03825	365	GT1_wcfI_like This family is most closely related	97.57
cd03822	366	GT1_ecORF704_like This family is most closely rela	97.56
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	97.56
cd03811	353	GT1_WabH_like This family is most closely related	97.55
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	97.52
cd03800	398	GT1_Sucrose_synthase This family is most closely r	97.49
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	97.49
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	97.47
PLN02275	371	transferase, transferring glycosyl groups	97.47
cd04949	372	GT1_gtfA_like This family is most closely related	97.32
cd03804	351	GT1_wbaZ_like This family is most closely related	97.29
cd03816	415	GT1_ALG1_like This family is most closely related	97.23
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	97.16
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	97.13
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	97.13
cd03818	396	GT1_ExpC_like This family is most closely related	97.12
cd03796	398	GT1_PIG-A_like This family is most closely related	96.94
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	96.91
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	96.9
cd03805	392	GT1_ALG2_like This family is most closely related	96.79
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	96.77
cd03809	365	GT1_mtfB_like This family is most closely related	96.76
PHA01633	335	putative glycosyl transferase group 1	96.75
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	96.75
cd03802	335	GT1_AviGT4_like This family is most closely relate	96.74
cd04946	407	GT1_AmsK_like This family is most closely related	96.61
cd04950	373	GT1_like_1 Glycosyltransferases catalyze the trans	96.58
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	96.55
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	96.44
PRK10307	412	putative glycosyl transferase; Provisional	96.39
cd03813	475	GT1_like_3 This family is most closely related to	96.36
cd04955	363	GT1_like_6 This family is most closely related to	96.26
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	96.25
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	96.16
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	96.15
PRK15490	578	Vi polysaccharide biosynthesis protein TviE; Provi	96.15
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	96.09
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	96.07
PRK15179	694	Vi polysaccharide biosynthesis protein TviE; Provi	95.97
PF04464	369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	95.92
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	95.85
PLN02846	462	digalactosyldiacylglycerol synthase	95.81
PF05159	269	Capsule_synth: Capsule polysaccharide biosynthesis	95.59
PLN02501	794	digalactosyldiacylglycerol synthase	95.46
cd03806	419	GT1_ALG11_like This family is most closely related	95.42
COG3660	329	Predicted nucleoside-diphosphate-sugar epimerase [	95.03
COG4370	412	Uncharacterized protein conserved in bacteria [Fun	94.84
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	94.38
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	94.32
PHA01630	331	putative group 1 glycosyl transferase	94.07
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	94.03
TIGR00730	178	conserved hypothetical protein, DprA/Smf-related,	93.87
PRK14098	489	glycogen synthase; Provisional	93.76
TIGR00421	181	ubiX_pad polyprenyl P-hydroxybenzoate and phenylac	93.11
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	93.08
PRK00654	466	glgA glycogen synthase; Provisional	92.87
PRK10125	405	putative glycosyl transferase; Provisional	92.71
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	92.68
TIGR03713	519	acc_sec_asp1 accessory Sec system protein Asp1. Th	92.67
PF03641	133	Lysine_decarbox: Possible lysine decarboxylase; In	92.19
PLN02939	977	transferase, transferring glycosyl groups	91.57
PF11071	141	DUF2872: Protein of unknown function (DUF2872); In	91.54
COG1817	346	Uncharacterized protein conserved in archaea [Func	91.47
PF13844	468	Glyco_transf_41: Glycosyl transferase family 41; P	91.44
PLN02949	463	transferase, transferring glycosyl groups	91.17
TIGR02400	456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	90.95
PRK14099	485	glycogen synthase; Provisional	90.93
TIGR03646	144	YtoQ_fam YtoQ family protein. Members of this fami	90.2
TIGR02470	784	sucr_synth sucrose synthase. This model represents	90.07
PF05014	113	Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransfer	88.76
PRK09932	381	glycerate kinase II; Provisional	88.34
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	88.27
COG0438	381	RfaG Glycosyltransferase [Cell envelope biogenesis	87.78
TIGR00725	159	conserved hypothetical protein, DprA/Smf-related,	87.51
PLN02316	1036	synthase/transferase	87.36
cd03788	460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	87.11
PLN00142	815	sucrose synthase	86.94
PRK10017	426	colanic acid biosynthesis protein; Provisional	86.82
PF04230	286	PS_pyruv_trans: Polysaccharide pyruvyl transferase	86.21
TIGR02919	438	accessory Sec system glycosyltransferase GtfB. Mem	86.06
PF06506	176	PrpR_N: Propionate catabolism activator; InterPro:	85.89
PRK03372	306	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	84.96
TIGR00732	220	dprA DNA protecting protein DprA. Disruption of th	84.92
PRK05920	204	aromatic acid decarboxylase; Validated	83.96
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	83.81
PLN02929	301	NADH kinase	83.78
PRK04885	265	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	83.15
PRK10342	381	glycerate kinase I; Provisional	82.41
PF13524	92	Glyco_trans_1_2: Glycosyl transferases group 1	82.31
TIGR02699	174	archaeo_AfpA archaeoflavoprotein AfpA. The prototy	81.91
cd03793	590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	81.6
PRK06029	185	3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Prov	80.97
PRK02155	291	ppnK NAD(+)/NADH kinase family protein; Provisiona	80.07

>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]

Probab=99.91  E-value=3.2e-24  Score=150.81  Aligned_cols=125  Identities=46%  Similarity=0.755  Sum_probs=111.7

Q ss_pred             CCcc-ccCCCcccCC--CCcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHH
Q 033065            1 MGQG-TYLPAESIGE--DGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEE   77 (128)
Q Consensus         1 ~g~~-~~~p~~~~~~--~~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~   77 (128)
                      ||+| .+.|.+...-  ..+..+..|+|.++|.+.|+.||+||+|||+||++|.+..|||.|+|++...|||||.+.|++
T Consensus        43 ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~AdlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~q  122 (170)
T KOG3349|consen   43 IGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRSADLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQ  122 (170)
T ss_pred             ecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHHhhccEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHH
Confidence            5777 5555543100  346789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCEEEeChHHHHHHHHhcchhcCCCCCCCChHHHHHHHHHhcCC
Q 033065           78 LADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLINRFLGF  125 (128)
Q Consensus        78 l~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~i~~~i~~~~g~  125 (128)
                      +++.|+.+..++..|.+.+.++...++++|++...+.+++.|.+..|+
T Consensus       123 L~~egyL~~C~ps~L~~~L~~~~~~~Lkpf~~~~~~~~~~~l~~~~~~  170 (170)
T KOG3349|consen  123 LAEEGYLYYCTPSTLPAGLAKLDLESLKPFPPSDPENFSKFLDAVVGL  170 (170)
T ss_pred             HHhcCcEEEeeccchHHHHHhhcccccccCCCCCCchHHHHHHHHhcC
Confidence            999999999999999999999988899999999999999999998875

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.88  E-value=1.2e-23  Score=149.87  Aligned_cols=101  Identities=37%  Similarity=0.482  Sum_probs=78.0

Q ss_pred             CccccCCCcccCCCCcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC
Q 033065            2 GQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR   81 (128)
Q Consensus         2 g~~~~~p~~~~~~~~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~   81 (128)
                      |.+.+.+........+.++++++|+++|.++|+.||+||||||++|++|++++|+|+|++|++.+.++||..||..+++.
T Consensus        39 G~~~~~~~~~~~~~~~~~v~~~~~~~~m~~~m~~aDlvIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~  118 (167)
T PF04101_consen   39 GKNNYEELKIKVENFNPNVKVFGFVDNMAELMAAADLVISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK  118 (167)
T ss_dssp             TTCECHHHCCCHCCTTCCCEEECSSSSHHHHHHHHSEEEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC
T ss_pred             CCCcHHHHHHHHhccCCcEEEEechhhHHHHHHHcCEEEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc
Confidence            55544444332212347899999999999999999999999999999999999999999999977778999999999999


Q ss_pred             CCEEEe-----ChHHHHHHHHhcchh
Q 033065           82 KHLYCA-----HPQSLHQVIVGMDLK  102 (128)
Q Consensus        82 g~~~~~-----~~~~l~~~i~~l~~~  102 (128)
                      |+++.+     +++.|.+.|.++...
T Consensus       119 g~~~~~~~~~~~~~~L~~~i~~l~~~  144 (167)
T PF04101_consen  119 GAAIMLDESELNPEELAEAIEELLSD  144 (167)
T ss_dssp             CCCCCSECCC-SCCCHHHHHHCHCCC
T ss_pred             CCccccCcccCCHHHHHHHHHHHHcC
Confidence            998653     578899999988654

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=99.86  E-value=4.3e-21  Score=152.63  Aligned_cols=104  Identities=30%  Similarity=0.335  Sum_probs=91.2

Q ss_pred             EEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHHHHH
Q 033065           20 VDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQSLHQ   94 (128)
Q Consensus        20 ~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~l~~   94 (128)
                      +++.+|+++|.++|++||+||||+|++|++|++++|+|+|+||++...++||+.||+.|+++|++.++     +++.|.+
T Consensus       237 ~~v~~f~~dm~~~~~~ADLvIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~  316 (357)
T COG0707         237 VRVLPFIDDMAALLAAADLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAE  316 (357)
T ss_pred             EEEeeHHhhHHHHHHhccEEEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHH
Confidence            89999999999999999999999999999999999999999999988789999999999999999774     6788998


Q ss_pred             HHHhcch----------hcCCCCCCCChHHHHHHHHHhc
Q 033065           95 VIVGMDL----------KSLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        95 ~i~~l~~----------~~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      .|.++++          +..+...+++++.+++.+.+..
T Consensus       317 ~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~~~~~~~~  355 (357)
T COG0707         317 LILRLLSNPEKLKAMAENAKKLGKPDAAERIADLLLALA  355 (357)
T ss_pred             HHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence            8888864          2233446678888888887653

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=99.75  E-value=1.1e-17  Score=132.55  Aligned_cols=103  Identities=21%  Similarity=0.242  Sum_probs=84.5

Q ss_pred             cEEEEeCh-hhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCC-CCchHHHHHHHHHhCCCEEEe-----ChHH
Q 033065           19 AVDCFTFS-SSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDL-MDNHQSELAEELADRKHLYCA-----HPQS   91 (128)
Q Consensus        19 ~~~v~~f~-~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~-~~~~Q~~nA~~l~~~g~~~~~-----~~~~   91 (128)
                      ++++++|+ ++|+++|+.||++|||||++|++|++++|+|+|++|++.+ .++||..||+++++.|++..+     +++.
T Consensus       235 ~~~~~~f~~~~m~~~~~~adlvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~  314 (352)
T PRK12446        235 GYRQFEYVHGELPDILAITDFVISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNS  314 (352)
T ss_pred             CcEEecchhhhHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHH
Confidence            45778998 7899999999999999999999999999999999999754 357999999999999999764     6788


Q ss_pred             HHHHHHhcchh-------cCCCCCCCChHHHHHHHHH
Q 033065           92 LHQVIVGMDLK-------SLLPYQPGDATPVAKLINR  121 (128)
Q Consensus        92 l~~~i~~l~~~-------~~~~~~~~~~~~i~~~i~~  121 (128)
                      |.+.+.+++.+       ..+...+++++.|++.|.+
T Consensus       315 l~~~l~~ll~~~~~~~~~~~~~~~~~aa~~i~~~i~~  351 (352)
T PRK12446        315 LIKHVEELSHNNEKYKTALKKYNGKEAIQTIIDHISE  351 (352)
T ss_pred             HHHHHHHHHcCHHHHHHHHHHcCCCCHHHHHHHHHHh
Confidence            88888887531       1222345778888887754

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=99.71  E-value=6.9e-17  Score=124.52  Aligned_cols=81  Identities=27%  Similarity=0.354  Sum_probs=73.5

Q ss_pred             cccEEEEeCh-hhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChH
Q 033065           17 LLAVDCFTFS-SSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQ   90 (128)
Q Consensus        17 ~~~~~v~~f~-~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~   90 (128)
                      ..|+++++|. +++.++|+.||+||||+|++|++|++++|+|+|++|.+.+  .+|..||+++++.|++..+     +++
T Consensus       231 ~~ni~~~~~~~~~~~~~m~~ad~vIs~~G~~t~~Ea~~~g~P~l~ip~~~~--~EQ~~~a~~l~~~G~~~~~~~~~~~~~  308 (318)
T PF13528_consen  231 PGNIHVRPFSTPDFAELMAAADLVISKGGYTTISEALALGKPALVIPRPGQ--DEQEYNARKLEELGLGIVLSQEDLTPE  308 (318)
T ss_pred             CCCEEEeecChHHHHHHHHhCCEEEECCCHHHHHHHHHcCCCEEEEeCCCC--chHHHHHHHHHHCCCeEEcccccCCHH
Confidence            5689999998 8999999999999999999999999999999999999743  6899999999999999874     678


Q ss_pred             HHHHHHHhc
Q 033065           91 SLHQVIVGM   99 (128)
Q Consensus        91 ~l~~~i~~l   99 (128)
                      .|+++|+++
T Consensus       309 ~l~~~l~~~  317 (318)
T PF13528_consen  309 RLAEFLERL  317 (318)
T ss_pred             HHHHHHhcC
Confidence            888888765

>COG5017 Uncharacterized conserved protein [Function unknown]

Probab=99.69  E-value=3.6e-16  Score=108.74  Aligned_cols=102  Identities=36%  Similarity=0.522  Sum_probs=82.9

Q ss_pred             CCccccCCCcccCCCCcccEEEEeC--hhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCC----CCCchHHHH
Q 033065            1 MGQGTYLPAESIGEDGLLAVDCFTF--SSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNED----LMDNHQSEL   74 (128)
Q Consensus         1 ~g~~~~~p~~~~~~~~~~~~~v~~f--~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~----~~~~~Q~~n   74 (128)
                      ||+|++.|-+      +  .++++|  .+.|..++..|.+||+|||.||+..++..+||.|++|+..    ++|+||.+.
T Consensus        37 yGn~d~kpva------g--l~v~~F~~~~kiQsli~darIVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvel  108 (161)
T COG5017          37 YGNGDIKPVA------G--LRVYGFDKEEKIQSLIHDARIVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVEL  108 (161)
T ss_pred             ecCCCccccc------c--cEEEeechHHHHHHHhhcceEEEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHH
Confidence            6899998843      3  355555  4679999999999999999999999999999999999986    899999999


Q ss_pred             HHHHHhCCCEEEeCh-HH-HHHHHHhcchhcCCCCCCC
Q 033065           75 AEELADRKHLYCAHP-QS-LHQVIVGMDLKSLLPYQPG  110 (128)
Q Consensus        75 A~~l~~~g~~~~~~~-~~-l~~~i~~l~~~~~~~~~~~  110 (128)
                      |..|.+.++...++| +. |.+.++........+++..
T Consensus       109 a~klae~~~vv~~spte~~L~a~l~~s~~~v~~~~~~s  146 (161)
T COG5017         109 ALKLAEINYVVACSPTELVLQAGLQVSVADVLHPFPIS  146 (161)
T ss_pred             HHHHHhcCceEEEcCCchhhHHhHhhhhhhhcCCCccc
Confidence            999999999977653 44 5666665555555666543

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=99.65  E-value=7.4e-16  Score=124.43  Aligned_cols=103  Identities=20%  Similarity=0.207  Sum_probs=86.0

Q ss_pred             CcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChH
Q 033065           16 GLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQ   90 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~   90 (128)
                      ...|+.+..|+++ .+++.+||+||||||+||++|++++|+|+|++|..    .||..||.++++.|+|+.+     +++
T Consensus       282 ~p~n~~v~~~~p~-~~~l~~ad~vI~hGG~gtt~eaL~~gvP~vv~P~~----~DQ~~nA~rve~~G~G~~l~~~~l~~~  356 (406)
T COG1819         282 VPDNVIVADYVPQ-LELLPRADAVIHHGGAGTTSEALYAGVPLVVIPDG----ADQPLNAERVEELGAGIALPFEELTEE  356 (406)
T ss_pred             CCCceEEecCCCH-HHHhhhcCEEEecCCcchHHHHHHcCCCEEEecCC----cchhHHHHHHHHcCCceecCcccCCHH
Confidence            4458999999996 68999999999999999999999999999999996    7899999999999999763     789


Q ss_pred             HHHHHHHhcchh----------cCCCCCCCChHHHHHHHHHhc
Q 033065           91 SLHQVIVGMDLK----------SLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        91 ~l~~~i~~l~~~----------~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      .|+++|++++..          ........+.+++++.|.++.
T Consensus       357 ~l~~av~~vL~~~~~~~~~~~~~~~~~~~~g~~~~a~~le~~~  399 (406)
T COG1819         357 RLRAAVNEVLADDSYRRAAERLAEEFKEEDGPAKAADLLEEFA  399 (406)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHhhhcccHHHHHHHHHHHH
Confidence            999999999751          111223345777888887764

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=99.63  E-value=2.7e-15  Score=116.96  Aligned_cols=81  Identities=27%  Similarity=0.322  Sum_probs=70.1

Q ss_pred             cccEEEEeChh-hHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChHHHHHH
Q 033065           17 LLAVDCFTFSS-SIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQV   95 (128)
Q Consensus        17 ~~~~~v~~f~~-~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~~~~~l~~~   95 (128)
                      ..|+++++|.+ +|.++|.+||++|||+|++|++|++++|+|+|++|.+.  +.||..||+.+++.|+++.++..++ +.
T Consensus       228 ~~~v~~~~~~~~~~~~~l~~ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~~--~~eQ~~na~~l~~~g~~~~l~~~~~-~~  304 (321)
T TIGR00661       228 NENVEIRRITTDNFKELIKNAELVITHGGFSLISEALSLGKPLIVIPDLG--QFEQGNNAVKLEDLGCGIALEYKEL-RL  304 (321)
T ss_pred             CCCEEEEECChHHHHHHHHhCCEEEECCChHHHHHHHHcCCCEEEEcCCC--cccHHHHHHHHHHCCCEEEcChhhH-HH
Confidence            45889999995 89999999999999999999999999999999999973  3589999999999999988766665 44


Q ss_pred             HHhcc
Q 033065           96 IVGMD  100 (128)
Q Consensus        96 i~~l~  100 (128)
                      ++.++
T Consensus       305 ~~~~~  309 (321)
T TIGR00661       305 LEAIL  309 (321)
T ss_pred             HHHHH
Confidence            44443

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=99.62  E-value=1.2e-15  Score=121.16  Aligned_cols=80  Identities=21%  Similarity=0.166  Sum_probs=72.0

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~   91 (128)
                      ..|+.+.+|++ +.++|..||++|||||+||++|++++|+|+|++|..    .+|..||+++++.|+++.+     ++++
T Consensus       287 ~~~v~~~~~~p-~~~ll~~~d~~I~hgG~~t~~eal~~GvP~v~~P~~----~dQ~~~a~~~~~~G~g~~l~~~~~~~~~  361 (401)
T cd03784         287 PDNVRVVDFVP-HDWLLPRCAAVVHHGGAGTTAAALRAGVPQLVVPFF----GDQPFWAARVAELGAGPALDPRELTAER  361 (401)
T ss_pred             CCceEEeCCCC-HHHHhhhhheeeecCCchhHHHHHHcCCCEEeeCCC----CCcHHHHHHHHHCCCCCCCCcccCCHHH
Confidence            45899999997 589999999999999999999999999999999986    5799999999999998663     6788


Q ss_pred             HHHHHHhcch
Q 033065           92 LHQVIVGMDL  101 (128)
Q Consensus        92 l~~~i~~l~~  101 (128)
                      |.++++++++
T Consensus       362 l~~al~~~l~  371 (401)
T cd03784         362 LAAALRRLLD  371 (401)
T ss_pred             HHHHHHHHhC
Confidence            9999988764

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=99.59  E-value=2.6e-15  Score=124.23  Aligned_cols=81  Identities=12%  Similarity=-0.016  Sum_probs=72.7

Q ss_pred             CcccEEEEeChhhHHHHH--hhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----C
Q 033065           16 GLLAVDCFTFSSSIADHL--SSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----H   88 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~--~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~   88 (128)
                      ...|+.+.+|.|+ .++|  .+++++|||||.||++|++++|+|+|++|..    .||..||++++++|+|+.+     +
T Consensus       344 ~p~Nv~i~~w~Pq-~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~----~DQ~~Na~rv~~~G~G~~l~~~~~t  418 (507)
T PHA03392        344 LPANVLTQKWFPQ-RAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMM----GDQFYNTNKYVELGIGRALDTVTVS  418 (507)
T ss_pred             CCCceEEecCCCH-HHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCC----ccHHHHHHHHHHcCcEEEeccCCcC
Confidence            3468999999997 6888  6799999999999999999999999999997    6899999999999999764     7


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      .++|.++|++++.
T Consensus       419 ~~~l~~ai~~vl~  431 (507)
T PHA03392        419 AAQLVLAIVDVIE  431 (507)
T ss_pred             HHHHHHHHHHHhC
Confidence            7899999988864

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=99.57  E-value=1.2e-14  Score=115.65  Aligned_cols=102  Identities=22%  Similarity=0.241  Sum_probs=81.6

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~   91 (128)
                      ..++.+.+|+++ .++|+.||++|||||.+|++|++++|+|+|++|..    .+|..||+++++.|++..+     ++++
T Consensus       274 ~~~v~~~~~~p~-~~ll~~~~~~I~hgG~~t~~Eal~~G~P~v~~p~~----~dq~~~a~~l~~~g~g~~l~~~~~~~~~  348 (392)
T TIGR01426       274 PPNVEVRQWVPQ-LEILKKADAFITHGGMNSTMEALFNGVPMVAVPQG----ADQPMTARRIAELGLGRHLPPEEVTAEK  348 (392)
T ss_pred             CCCeEEeCCCCH-HHHHhhCCEEEECCCchHHHHHHHhCCCEEecCCc----ccHHHHHHHHHHCCCEEEeccccCCHHH
Confidence            357889999987 58999999999999999999999999999999986    6899999999999999664     5788


Q ss_pred             HHHHHHhcchhc----------CCCCCCCChHHHHHHHHHhc
Q 033065           92 LHQVIVGMDLKS----------LLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        92 l~~~i~~l~~~~----------~~~~~~~~~~~i~~~i~~~~  123 (128)
                      |.++|++++.+.          ......++++..++.|.+++
T Consensus       349 l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~~  390 (392)
T TIGR01426       349 LREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEGFL  390 (392)
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHhh
Confidence            999998875321          00112245667777776653

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=99.57  E-value=2.7e-14  Score=111.79  Aligned_cols=107  Identities=24%  Similarity=0.325  Sum_probs=88.4

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C--hHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---H--PQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~--~~~   91 (128)
                      +.++++.+|++++.++|+.||++|+++|.+|++|++++|+|+|++|.+....++|..+++.+.+.|.++++   +  ++.
T Consensus       234 ~~~v~~~g~~~~~~~~~~~~d~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~  313 (357)
T PRK00726        234 GINAEVVPFIDDMAAAYAAADLVICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEK  313 (357)
T ss_pred             CCcEEEeehHhhHHHHHHhCCEEEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHH
Confidence            34589999999999999999999999999999999999999999998655557899999999999999765   3  899


Q ss_pred             HHHHHHhcchh----------cCCCCCCCChHHHHHHHHHhc
Q 033065           92 LHQVIVGMDLK----------SLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        92 l~~~i~~l~~~----------~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      |.++|++++.+          ..+...+.+++.+++.+.+.+
T Consensus       314 l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (357)
T PRK00726        314 LAEKLLELLSDPERLEAMAEAARALGKPDAAERLADLIEELA  355 (357)
T ss_pred             HHHHHHHHHcCHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence            99999988531          222344567778888877653

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=99.55  E-value=4.7e-14  Score=111.28  Aligned_cols=106  Identities=22%  Similarity=0.307  Sum_probs=88.7

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~   91 (128)
                      .++++++.|..+|..+|..|+++||.||+||++|.+.+|||.++||+..... +|...|+++++.|+.-++     +++.
T Consensus       276 ~p~i~I~~f~~~~~~ll~gA~~vVSm~GYNTvCeILs~~k~aLivPr~~p~e-EQliRA~Rl~~LGL~dvL~pe~lt~~~  354 (400)
T COG4671         276 RPHISIFEFRNDFESLLAGARLVVSMGGYNTVCEILSFGKPALIVPRAAPRE-EQLIRAQRLEELGLVDVLLPENLTPQN  354 (400)
T ss_pred             CCCeEEEEhhhhHHHHHHhhheeeecccchhhhHHHhCCCceEEeccCCCcH-HHHHHHHHHHhcCcceeeCcccCChHH
Confidence            3789999999999999999999999999999999999999999999986644 899999999999999553     7888


Q ss_pred             HHHHHHhcchh---cCCCCCCCChHHHHHHHHHhc
Q 033065           92 LHQVIVGMDLK---SLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        92 l~~~i~~l~~~---~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      |+++|..++..   ......=++.+.++++|.+++
T Consensus       355 La~al~~~l~~P~~~~~~L~L~G~~~~a~~l~e~L  389 (400)
T COG4671         355 LADALKAALARPSPSKPHLDLEGLEHIARILAELL  389 (400)
T ss_pred             HHHHHHhcccCCCCCccccCchhhHhHHHHHHHHh
Confidence            99999888652   111111256888888887765

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=99.53  E-value=7.6e-14  Score=111.62  Aligned_cols=103  Identities=15%  Similarity=0.185  Sum_probs=86.0

Q ss_pred             ccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEE-eCCCCCCchHHHHHHHHHhCCCEEEe-ChHHHHHH
Q 033065           18 LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVV-VNEDLMDNHQSELAEELADRKHLYCA-HPQSLHQV   95 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~v-P~~~~~~~~Q~~nA~~l~~~g~~~~~-~~~~l~~~   95 (128)
                      .++++.+|+++|.++|+.||++|+++|..|++|++++|+|+|++ |.+    ++|..|+..+.+.|+++.. +++++.+.
T Consensus       256 ~~v~~~G~~~~~~~~~~~aDl~I~k~gg~tl~EA~a~G~PvI~~~~~p----gqe~~N~~~~~~~G~g~~~~~~~~l~~~  331 (391)
T PRK13608        256 ENVLILGYTKHMNEWMASSQLMITKPGGITISEGLARCIPMIFLNPAP----GQELENALYFEEKGFGKIADTPEEAIKI  331 (391)
T ss_pred             CCeEEEeccchHHHHHHhhhEEEeCCchHHHHHHHHhCCCEEECCCCC----CcchhHHHHHHhCCcEEEeCCHHHHHHH
Confidence            47899999999999999999999999999999999999999998 665    5678999999999999765 88899888


Q ss_pred             HHhcch----------hcCCCCCCCChHHHHHHHHHhcC
Q 033065           96 IVGMDL----------KSLLPYQPGDATPVAKLINRFLG  124 (128)
Q Consensus        96 i~~l~~----------~~~~~~~~~~~~~i~~~i~~~~g  124 (128)
                      |.++++          +..+...+.+.+.+++.+.+.++
T Consensus       332 i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~  370 (391)
T PRK13608        332 VASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIG  370 (391)
T ss_pred             HHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhh
Confidence            887753          12233445678888888877664

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=99.52  E-value=5.5e-14  Score=114.92  Aligned_cols=81  Identities=20%  Similarity=0.150  Sum_probs=65.6

Q ss_pred             CcccEEEEeChhhHHHHHh--hccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----C
Q 033065           16 GLLAVDCFTFSSSIADHLS--SASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----H   88 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~--~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~   88 (128)
                      .+.|+.+..|.|+ .++|+  +.+++|||||.+|+.|++++|+|+|.+|..    +||..||.++++.|.|+.+     +
T Consensus       321 l~~n~~~~~W~PQ-~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~----~DQ~~na~~~~~~G~g~~l~~~~~~  395 (500)
T PF00201_consen  321 LPKNVLIVKWLPQ-NDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLF----GDQPRNAARVEEKGVGVVLDKNDLT  395 (500)
T ss_dssp             HHTTEEEESS--H-HHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCS----TTHHHHHHHHHHTTSEEEEGGGC-S
T ss_pred             ccceEEEeccccc-hhhhhcccceeeeeccccchhhhhhhccCCccCCCCc----ccCCccceEEEEEeeEEEEEecCCc
Confidence            3468899999998 58885  667999999999999999999999999997    7899999999999999874     7


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      .++|.++|++++.
T Consensus       396 ~~~l~~ai~~vl~  408 (500)
T PF00201_consen  396 EEELRAAIREVLE  408 (500)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            8899999999864

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=99.48  E-value=3.4e-13  Score=107.30  Aligned_cols=103  Identities=16%  Similarity=0.254  Sum_probs=85.2

Q ss_pred             ccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-ChHHHHHHH
Q 033065           18 LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-HPQSLHQVI   96 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-~~~~l~~~i   96 (128)
                      .++++.+|+++|.++|+.||++|+.+|.+|++|++++|+|+|+.+..   .+++..|+..+.+.|.++.. +++.|.++|
T Consensus       265 ~~v~~~G~~~~~~~l~~aaDv~V~~~g~~ti~EAma~g~PvI~~~~~---pgqe~gn~~~i~~~g~g~~~~~~~~la~~i  341 (382)
T PLN02605        265 IPVKVRGFVTNMEEWMGACDCIITKAGPGTIAEALIRGLPIILNGYI---PGQEEGNVPYVVDNGFGAFSESPKEIARIV  341 (382)
T ss_pred             CCeEEEeccccHHHHHHhCCEEEECCCcchHHHHHHcCCCEEEecCC---CccchhhHHHHHhCCceeecCCHHHHHHHH
Confidence            46889999999999999999999999999999999999999999653   35667899999999998664 889999998


Q ss_pred             Hhcchh-----------cCCCCCCCChHHHHHHHHHhc
Q 033065           97 VGMDLK-----------SLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        97 ~~l~~~-----------~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      .+++.+           .++...+++++.+++.|.+.+
T Consensus       342 ~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~  379 (382)
T PLN02605        342 AEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELV  379 (382)
T ss_pred             HHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHh
Confidence            877532           122345577888888887764

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=99.41  E-value=2.1e-12  Score=100.19  Aligned_cols=85  Identities=26%  Similarity=0.350  Sum_probs=75.4

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~   91 (128)
                      +.++++.+|++++.++|+.||++|+++|.+|+.|++++|+|+|++|.+...+++|..+++.+.+.|.++.+     +++.
T Consensus       234 ~~~v~~~g~~~~~~~~l~~ad~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~  313 (350)
T cd03785         234 GVNYEVFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPER  313 (350)
T ss_pred             CCCeEEeehhhhHHHHHHhcCEEEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHH
Confidence            35799999999999999999999999999999999999999999998765568999999999999988653     5889


Q ss_pred             HHHHHHhcch
Q 033065           92 LHQVIVGMDL  101 (128)
Q Consensus        92 l~~~i~~l~~  101 (128)
                      |.++|.+++.
T Consensus       314 l~~~i~~ll~  323 (350)
T cd03785         314 LAAALLELLS  323 (350)
T ss_pred             HHHHHHHHhc
Confidence            9999987753

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=99.41  E-value=2.5e-12  Score=101.68  Aligned_cols=104  Identities=16%  Similarity=0.153  Sum_probs=85.8

Q ss_pred             ccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEE-eCCCCCCchHHHHHHHHHhCCCEEEe-ChHHHHHH
Q 033065           18 LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVV-VNEDLMDNHQSELAEELADRKHLYCA-HPQSLHQV   95 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~v-P~~~~~~~~Q~~nA~~l~~~g~~~~~-~~~~l~~~   95 (128)
                      .++++.+|++++.++|+.||++|+++|..|+.|++++|+|+|+. |.+    ++|..|+..+.+.|+++.. ++++|.++
T Consensus       256 ~~v~~~g~~~~~~~l~~~aD~~v~~~gg~t~~EA~a~g~PvI~~~~~~----g~~~~n~~~~~~~G~~~~~~~~~~l~~~  331 (380)
T PRK13609        256 DALKVFGYVENIDELFRVTSCMITKPGGITLSEAAALGVPVILYKPVP----GQEKENAMYFERKGAAVVIRDDEEVFAK  331 (380)
T ss_pred             CcEEEEechhhHHHHHHhccEEEeCCCchHHHHHHHhCCCEEECCCCC----CcchHHHHHHHhCCcEEEECCHHHHHHH
Confidence            47999999999999999999999999999999999999998885 554    5678899999999998764 88999999


Q ss_pred             HHhcchh----------cCCCCCCCChHHHHHHHHHhcCC
Q 033065           96 IVGMDLK----------SLLPYQPGDATPVAKLINRFLGF  125 (128)
Q Consensus        96 i~~l~~~----------~~~~~~~~~~~~i~~~i~~~~g~  125 (128)
                      |.+++.+          ..+...+.+.+++++.+.+.++.
T Consensus       332 i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~  371 (380)
T PRK13609        332 TEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAENHV  371 (380)
T ss_pred             HHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhh
Confidence            8887531          12233446788999999887753

>TIGR03492 conserved hypothetical protein

Probab=99.39  E-value=4.8e-12  Score=101.93  Aligned_cols=98  Identities=20%  Similarity=0.199  Sum_probs=77.2

Q ss_pred             cEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC----CCEEEe---ChHH
Q 033065           19 AVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR----KHLYCA---HPQS   91 (128)
Q Consensus        19 ~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~----g~~~~~---~~~~   91 (128)
                      ++++..|.++|.++|+.||+|||++|+.| .|++++|+|+|++|.+    +||. ||..+++.    |.++.+   +++.
T Consensus       280 ~~~v~~~~~~~~~~l~~ADlvI~rSGt~T-~E~a~lg~P~Ilip~~----~~q~-na~~~~~~~~l~g~~~~l~~~~~~~  353 (396)
T TIGR03492       280 TLEVLLGRGAFAEILHWADLGIAMAGTAT-EQAVGLGKPVIQLPGK----GPQF-TYGFAEAQSRLLGGSVFLASKNPEQ  353 (396)
T ss_pred             ceEEEechHhHHHHHHhCCEEEECcCHHH-HHHHHhCCCEEEEeCC----CCHH-HHHHHHhhHhhcCCEEecCCCCHHH
Confidence            36777888899999999999999999877 9999999999999985    6897 99888874    666553   5688


Q ss_pred             HHHHHHhcchh-----------cCCCCCCCChHHHHHHHHHh
Q 033065           92 LHQVIVGMDLK-----------SLLPYQPGDATPVAKLINRF  122 (128)
Q Consensus        92 l~~~i~~l~~~-----------~~~~~~~~~~~~i~~~i~~~  122 (128)
                      |.+.+.+++++           ..+...+++++.+++.|.+.
T Consensus       354 l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~~  395 (396)
T TIGR03492       354 AAQVVRQLLADPELLERCRRNGQERMGPPGASARIAESILKQ  395 (396)
T ss_pred             HHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHh
Confidence            88888777531           11223456788888888765

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=99.36  E-value=1.7e-12  Score=100.05  Aligned_cols=56  Identities=23%  Similarity=0.344  Sum_probs=51.7

Q ss_pred             ccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHH
Q 033065           18 LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEEL   78 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l   78 (128)
                      .++++++|+++|.++|++||++||++| +|++|++++|+|+|++|..    ++|..||+.|
T Consensus       224 ~~i~~~~~~~~m~~lm~~aDl~Is~~G-~T~~E~~a~g~P~i~i~~~----~nQ~~~a~~~  279 (279)
T TIGR03590       224 PNIILFIDVENMAELMNEADLAIGAAG-STSWERCCLGLPSLAICLA----ENQQSNSQQL  279 (279)
T ss_pred             CCEEEEeCHHHHHHHHHHCCEEEECCc-hHHHHHHHcCCCEEEEEec----ccHHHHhhhC
Confidence            479999999999999999999999999 8999999999999999986    4688999864

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=99.30  E-value=4.5e-12  Score=103.76  Aligned_cols=79  Identities=18%  Similarity=0.102  Sum_probs=68.6

Q ss_pred             ccEEEEeChhhHHHHHhhcc--EEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEEE----eChH
Q 033065           18 LAVDCFTFSSSIADHLSSAS--LVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR-KHLYC----AHPQ   90 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~ad--lvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~-g~~~~----~~~~   90 (128)
                      .+..+.+|.|+ .++++..+  ++|||||.||++|++++|+|+|.+|..    .||..||+++++. |+++.    .+.+
T Consensus       324 ~~g~v~~w~PQ-~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~----~DQ~~na~~~~~~~~~G~~~~~~~~~~  398 (451)
T PLN02410        324 GRGYIVKWAPQ-KEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFS----SDQKVNARYLECVWKIGIQVEGDLDRG  398 (451)
T ss_pred             CCeEEEccCCH-HHHhCCCccCeeeecCchhHHHHHHHcCCCEEecccc----ccCHHHHHHHHHHhCeeEEeCCcccHH
Confidence            35678899998 68998855  599999999999999999999999996    6899999999876 88855    3789


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      +++++|++++.
T Consensus       399 ~v~~av~~lm~  409 (451)
T PLN02410        399 AVERAVKRLMV  409 (451)
T ss_pred             HHHHHHHHHHc
Confidence            99999999874

>PLN03004 UDP-glycosyltransferase

Probab=99.29  E-value=8.6e-12  Score=102.16  Aligned_cols=79  Identities=14%  Similarity=0.135  Sum_probs=70.6

Q ss_pred             ccEEEEeChhhHHHHHhhccE--EEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe-------
Q 033065           18 LAVDCFTFSSSIADHLSSASL--VISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD-RKHLYCA-------   87 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adl--vIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~-~g~~~~~-------   87 (128)
                      .++.+.+|.|+ .++++.+++  +|||||.+|++|++++|+|+|.+|..    .+|..||+++++ .|+++.+       
T Consensus       334 ~g~~v~~W~PQ-~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~----~DQ~~na~~~~~~~g~g~~l~~~~~~~  408 (451)
T PLN03004        334 KGMVVKSWAPQ-VPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLY----AEQRFNRVMIVDEIKIAISMNESETGF  408 (451)
T ss_pred             CcEEEEeeCCH-HHHhCCCccceEeccCcchHHHHHHHcCCCEEecccc----ccchhhHHHHHHHhCceEEecCCcCCc
Confidence            57889999998 589999998  99999999999999999999999996    789999999986 5888543       


Q ss_pred             -ChHHHHHHHHhcch
Q 033065           88 -HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 -~~~~l~~~i~~l~~  101 (128)
                       +.++++++|++++.
T Consensus       409 ~~~e~l~~av~~vm~  423 (451)
T PLN03004        409 VSSTEVEKRVQEIIG  423 (451)
T ss_pred             cCHHHHHHHHHHHhc
Confidence             67899999999974

>PLN02670 transferase, transferring glycosyl groups

Probab=99.29  E-value=4.5e-12  Score=104.28  Aligned_cols=77  Identities=21%  Similarity=0.195  Sum_probs=67.9

Q ss_pred             EEEEeChhhHHHHHhhccE--EEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---------C
Q 033065           20 VDCFTFSSSIADHLSSASL--VISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---------H   88 (128)
Q Consensus        20 ~~v~~f~~~~~~~~~~adl--vIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---------~   88 (128)
                      +.+.+|.|+ .++++..++  +|||||.+|++|++++|+|+|.+|..    .+|..||+++++.|+++.+         +
T Consensus       341 ~vv~~W~PQ-~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~----~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~  415 (472)
T PLN02670        341 MIHVGWVPQ-VKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVL----NEQGLNTRLLHGKKLGLEVPRDERDGSFT  415 (472)
T ss_pred             eEEeCcCCH-HHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcch----hccHHHHHHHHHcCeeEEeeccccCCcCc
Confidence            677899998 588977665  99999999999999999999999986    7899999999999999653         5


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      .++++++|++++.
T Consensus       416 ~e~i~~av~~vm~  428 (472)
T PLN02670        416 SDSVAESVRLAMV  428 (472)
T ss_pred             HHHHHHHHHHHhc
Confidence            7889999999873

>PLN02210 UDP-glucosyl transferase

Probab=99.29  E-value=5.9e-12  Score=103.19  Aligned_cols=77  Identities=19%  Similarity=0.157  Sum_probs=67.9

Q ss_pred             EEEEeChhhHHHHHhhcc--EEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe---------
Q 033065           20 VDCFTFSSSIADHLSSAS--LVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD-RKHLYCA---------   87 (128)
Q Consensus        20 ~~v~~f~~~~~~~~~~ad--lvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~-~g~~~~~---------   87 (128)
                      ..+.+|.|+ .++++.++  ++|||||.||++|++++|+|+|.+|..    .||..||+++++ .|+|+.+         
T Consensus       326 g~v~~w~PQ-~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~----~DQ~~na~~~~~~~g~G~~l~~~~~~~~~  400 (456)
T PLN02210        326 GVVLEWSPQ-EKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSW----TDQPIDARLLVDVFGIGVRMRNDAVDGEL  400 (456)
T ss_pred             eEEEecCCH-HHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccc----cccHHHHHHHHHHhCeEEEEeccccCCcC
Confidence            357799998 58999998  999999999999999999999999996    789999999998 7888543         


Q ss_pred             ChHHHHHHHHhcch
Q 033065           88 HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ~~~~l~~~i~~l~~  101 (128)
                      +.++|++++++++.
T Consensus       401 ~~~~l~~av~~~m~  414 (456)
T PLN02210        401 KVEEVERCIEAVTE  414 (456)
T ss_pred             CHHHHHHHHHHHhc
Confidence            67889999998863

>PLN02554 UDP-glycosyltransferase family protein

Probab=99.27  E-value=7.1e-12  Score=103.22  Aligned_cols=78  Identities=17%  Similarity=0.129  Sum_probs=66.6

Q ss_pred             cEEEEeChhhHHHHH--hhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHH-HHhCCCEEE---------
Q 033065           19 AVDCFTFSSSIADHL--SSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEE-LADRKHLYC---------   86 (128)
Q Consensus        19 ~~~v~~f~~~~~~~~--~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~-l~~~g~~~~---------   86 (128)
                      +..+.+|.|+ .+++  .++.++|||||.||+.|++++|+|+|++|..    .||..||++ +++.|+++.         
T Consensus       343 ~g~v~~W~PQ-~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~----~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~  417 (481)
T PLN02554        343 IGKVIGWAPQ-VAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLY----AEQKFNAFEMVEELGLAVEIRKYWRGDL  417 (481)
T ss_pred             CceEEeeCCH-HHHhCCcccCcccccCccchHHHHHHcCCCEEecCcc----ccchhhHHHHHHHhCceEEeeccccccc
Confidence            5677899998 5888  7778899999999999999999999999996    789999954 677888743         


Q ss_pred             -------eChHHHHHHHHhcch
Q 033065           87 -------AHPQSLHQVIVGMDL  101 (128)
Q Consensus        87 -------~~~~~l~~~i~~l~~  101 (128)
                             ++.+++.++|++++.
T Consensus       418 ~~~~~~~~~~e~l~~av~~vm~  439 (481)
T PLN02554        418 LAGEMETVTAEEIERGIRCLME  439 (481)
T ss_pred             cccccCeEcHHHHHHHHHHHhc
Confidence                   367889999998874

>PLN02562 UDP-glycosyltransferase

Probab=99.27  E-value=1.5e-11  Score=100.66  Aligned_cols=79  Identities=13%  Similarity=0.083  Sum_probs=69.0

Q ss_pred             ccEEEEeChhhHHHHHhhcc--EEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEEEe---ChHH
Q 033065           18 LAVDCFTFSSSIADHLSSAS--LVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR-KHLYCA---HPQS   91 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~ad--lvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~-g~~~~~---~~~~   91 (128)
                      .|+.+.+|.|+ .++++.++  ++|||||.||++|++++|+|+|.+|..    .||..||+++++. |.++.+   +.++
T Consensus       328 ~~~~v~~w~PQ-~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~----~DQ~~na~~~~~~~g~g~~~~~~~~~~  402 (448)
T PLN02562        328 KQGKVVSWAPQ-LEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVA----GDQFVNCAYIVDVWKIGVRISGFGQKE  402 (448)
T ss_pred             cCEEEEecCCH-HHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcc----cchHHHHHHHHHHhCceeEeCCCCHHH
Confidence            46788899998 68998866  799999999999999999999999996    7899999999874 877653   7889


Q ss_pred             HHHHHHhcch
Q 033065           92 LHQVIVGMDL  101 (128)
Q Consensus        92 l~~~i~~l~~  101 (128)
                      +.++|++++.
T Consensus       403 l~~~v~~~l~  412 (448)
T PLN02562        403 VEEGLRKVME  412 (448)
T ss_pred             HHHHHHHHhC
Confidence            9999988863

>PLN02448 UDP-glycosyltransferase family protein

Probab=99.26  E-value=1.5e-11  Score=100.69  Aligned_cols=78  Identities=13%  Similarity=0.110  Sum_probs=67.3

Q ss_pred             cEEEEeChhhHHHHHhhccE--EEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEEE---------
Q 033065           19 AVDCFTFSSSIADHLSSASL--VISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR-KHLYC---------   86 (128)
Q Consensus        19 ~~~v~~f~~~~~~~~~~adl--vIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~-g~~~~---------   86 (128)
                      +..+.+|.|+ .++++.+++  +|||||.||++|++++|+|+|++|..    .+|..||+++++. |+++.         
T Consensus       324 ~~~v~~w~pQ-~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~~g~G~~~~~~~~~~~  398 (459)
T PLN02448        324 MGLVVPWCDQ-LKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLF----WDQPLNSKLIVEDWKIGWRVKREVGEET  398 (459)
T ss_pred             CEEEeccCCH-HHHhccCccceEEecCchhHHHHHHHcCCCEEecccc----ccchhhHHHHHHHhCceEEEecccccCC
Confidence            5678899998 689988876  99999999999999999999999986    7899999999984 55533         


Q ss_pred             -eChHHHHHHHHhcch
Q 033065           87 -AHPQSLHQVIVGMDL  101 (128)
Q Consensus        87 -~~~~~l~~~i~~l~~  101 (128)
                       .++++|++++++++.
T Consensus       399 ~~~~~~l~~av~~vl~  414 (459)
T PLN02448        399 LVGREEIAELVKRFMD  414 (459)
T ss_pred             cCcHHHHHHHHHHHhc
Confidence             267889999999874

>PLN03007 UDP-glucosyltransferase family protein

Probab=99.26  E-value=6.1e-12  Score=103.60  Aligned_cols=80  Identities=10%  Similarity=0.063  Sum_probs=68.3

Q ss_pred             cccEEEEeChhhHHHHHhhccE--EEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHH---hCCCEEE-----
Q 033065           17 LLAVDCFTFSSSIADHLSSASL--VISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELA---DRKHLYC-----   86 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adl--vIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~---~~g~~~~-----   86 (128)
                      +.++.+.+|.|+ .++++.+++  +|||||.+|++|++++|+|+|.+|..    .+|..||++++   +.|+++.     
T Consensus       344 ~~g~~v~~w~PQ-~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~----~DQ~~na~~~~~~~~~G~~~~~~~~~  418 (482)
T PLN03007        344 GKGLIIRGWAPQ-VLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVG----AEQFYNEKLVTQVLRTGVSVGAKKLV  418 (482)
T ss_pred             cCCEEEecCCCH-HHHhccCccceeeecCcchHHHHHHHcCCCeeeccch----hhhhhhHHHHHHhhcceeEecccccc
Confidence            347889999998 689999865  99999999999999999999999996    78999999876   4566641     


Q ss_pred             ------eChHHHHHHHHhcch
Q 033065           87 ------AHPQSLHQVIVGMDL  101 (128)
Q Consensus        87 ------~~~~~l~~~i~~l~~  101 (128)
                            ++.++|.++|++++.
T Consensus       419 ~~~~~~~~~~~l~~av~~~m~  439 (482)
T PLN03007        419 KVKGDFISREKVEKAVREVIV  439 (482)
T ss_pred             ccccCcccHHHHHHHHHHHhc
Confidence                  378889999998874

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=99.26  E-value=1.4e-11  Score=101.56  Aligned_cols=79  Identities=15%  Similarity=0.160  Sum_probs=69.1

Q ss_pred             ccEEEEeChhhHHHHHhhccE--EEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHH-hCCCEEEe-------
Q 033065           18 LAVDCFTFSSSIADHLSSASL--VISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELA-DRKHLYCA-------   87 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adl--vIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~-~~g~~~~~-------   87 (128)
                      -++.+.+|.|+ .++++.+.+  +|||||.+|++|++++|+|+|.+|..    .+|..||+++. +.|+++.+       
T Consensus       338 rg~vv~~W~PQ-~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~----~DQ~~na~~~~~~~g~gv~~~~~~~~~  412 (481)
T PLN02992        338 RGFVVPSWAPQ-AEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLF----AEQNMNAALLSDELGIAVRSDDPKEVI  412 (481)
T ss_pred             CCEEEeecCCH-HHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCcc----chhHHHHHHHHHHhCeeEEecCCCCcc
Confidence            36888999998 589999885  99999999999999999999999996    78999999995 88988653       


Q ss_pred             ChHHHHHHHHhcch
Q 033065           88 HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ~~~~l~~~i~~l~~  101 (128)
                      +.+++.++|++++.
T Consensus       413 ~~~~l~~av~~vm~  426 (481)
T PLN02992        413 SRSKIEALVRKVMV  426 (481)
T ss_pred             cHHHHHHHHHHHhc
Confidence            67888999988863

>PLN02207 UDP-glycosyltransferase

Probab=99.26  E-value=8.4e-12  Score=102.61  Aligned_cols=79  Identities=19%  Similarity=0.146  Sum_probs=68.2

Q ss_pred             ccEEEEeChhhHHHHHhhccE--EEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEE---------
Q 033065           18 LAVDCFTFSSSIADHLSSASL--VISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD-RKHLY---------   85 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adl--vIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~-~g~~~---------   85 (128)
                      .+..+.+|.|+ .++++...+  +|||||.+|++|++++|+|+|.+|..    .+|..||+++++ .|+++         
T Consensus       332 ~~g~i~~W~PQ-~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~----~DQ~~Na~~~~~~~gvGv~~~~~~~~~  406 (468)
T PLN02207        332 GRGMICGWSPQ-VEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMY----AEQQLNAFLMVKELKLAVELKLDYRVH  406 (468)
T ss_pred             CCeEEEEeCCH-HHHhcccccceeeecCccccHHHHHHcCCCEEecCcc----ccchhhHHHHHHHhCceEEEecccccc
Confidence            45677899998 588888665  99999999999999999999999996    789999999887 78886         


Q ss_pred             ---EeChHHHHHHHHhcch
Q 033065           86 ---CAHPQSLHQVIVGMDL  101 (128)
Q Consensus        86 ---~~~~~~l~~~i~~l~~  101 (128)
                         .++.++|.++|++++.
T Consensus       407 ~~~~v~~e~i~~av~~vm~  425 (468)
T PLN02207        407 SDEIVNANEIETAIRCVMN  425 (468)
T ss_pred             cCCcccHHHHHHHHHHHHh
Confidence               1377899999999874

>PLN02173 UDP-glucosyl transferase family protein

Probab=99.25  E-value=1.3e-11  Score=101.03  Aligned_cols=79  Identities=20%  Similarity=0.183  Sum_probs=68.7

Q ss_pred             ccEEEEeChhhHHHHHhhcc--EEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEEEe-------
Q 033065           18 LAVDCFTFSSSIADHLSSAS--LVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR-KHLYCA-------   87 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~ad--lvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~-g~~~~~-------   87 (128)
                      -++.+.+|.|+ .++++..+  ++|||||.+|++|++++|+|+|.+|..    .+|..||+++++. |+++.+       
T Consensus       317 ~~~~i~~W~PQ-~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~----~DQ~~Na~~v~~~~g~Gv~v~~~~~~~  391 (449)
T PLN02173        317 DKSLVLKWSPQ-LQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQW----TDQPMNAKYIQDVWKVGVRVKAEKESG  391 (449)
T ss_pred             CceEEeCCCCH-HHHhCCCccceEEecCccchHHHHHHcCCCEEecCch----hcchHHHHHHHHHhCceEEEeecccCC
Confidence            46788899998 57888877  999999999999999999999999986    7899999999975 666432       


Q ss_pred             --ChHHHHHHHHhcch
Q 033065           88 --HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 --~~~~l~~~i~~l~~  101 (128)
                        +.+++.+++++++.
T Consensus       392 ~~~~e~v~~av~~vm~  407 (449)
T PLN02173        392 IAKREEIEFSIKEVME  407 (449)
T ss_pred             cccHHHHHHHHHHHhc
Confidence              67889999999873

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=99.23  E-value=1.6e-11  Score=100.70  Aligned_cols=79  Identities=18%  Similarity=0.186  Sum_probs=68.4

Q ss_pred             ccEEEEeChhhHHHHHhhcc--EEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh---CCCEEE------
Q 033065           18 LAVDCFTFSSSIADHLSSAS--LVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD---RKHLYC------   86 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~ad--lvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~---~g~~~~------   86 (128)
                      .+..+.+|.|++ ++++..+  ++|||||.+|+.|++++|+|+|.+|..    .+|..||+++++   .|.++.      
T Consensus       327 ~~g~v~~W~PQ~-~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~----~DQ~~na~~~~~~~~~G~~~~~~~~~~  401 (455)
T PLN02152        327 EVGMIVSWCSQI-EVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMW----SDQPANAKLLEEIWKTGVRVRENSEGL  401 (455)
T ss_pred             CCeEEEeeCCHH-HHhCCcccceEEeeCCcccHHHHHHcCCCEEecccc----ccchHHHHHHHHHhCceEEeecCcCCc
Confidence            456788999984 7888888  699999999999999999999999996    789999999998   565553      


Q ss_pred             eChHHHHHHHHhcch
Q 033065           87 AHPQSLHQVIVGMDL  101 (128)
Q Consensus        87 ~~~~~l~~~i~~l~~  101 (128)
                      .+.++|+++|++++.
T Consensus       402 ~~~e~l~~av~~vm~  416 (455)
T PLN02152        402 VERGEIRRCLEAVME  416 (455)
T ss_pred             CcHHHHHHHHHHHHh
Confidence            378899999999874

>PLN02208 glycosyltransferase family protein

Probab=99.23  E-value=2.9e-11  Score=98.83  Aligned_cols=79  Identities=16%  Similarity=0.145  Sum_probs=68.2

Q ss_pred             ccEEEEeChhhHHHHHhhcc--EEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe-------
Q 033065           18 LAVDCFTFSSSIADHLSSAS--LVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD-RKHLYCA-------   87 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~ad--lvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~-~g~~~~~-------   87 (128)
                      .++.+.+|.|+ .++++..+  ++|||||.+|++|++++|+|+|.+|..    .||..||+++.+ .|.++.+       
T Consensus       311 ~g~~v~~W~PQ-~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~----~DQ~~na~~~~~~~g~gv~~~~~~~~~  385 (442)
T PLN02208        311 RGVVWGGWVQQ-PLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFL----SDQVLFTRLMTEEFEVSVEVSREKTGW  385 (442)
T ss_pred             CCcEeeccCCH-HHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcc----hhhHHHHHHHHHHhceeEEeccccCCc
Confidence            46788899999 57888776  699999999999999999999999996    789999998877 7888543       


Q ss_pred             -ChHHHHHHHHhcch
Q 033065           88 -HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 -~~~~l~~~i~~l~~  101 (128)
                       +.+++.++|++++.
T Consensus       386 ~~~~~l~~ai~~~m~  400 (442)
T PLN02208        386 FSKESLSNAIKSVMD  400 (442)
T ss_pred             CcHHHHHHHHHHHhc
Confidence             67889999988873

>PLN02555 limonoid glucosyltransferase

Probab=99.22  E-value=2.3e-11  Score=100.32  Aligned_cols=78  Identities=18%  Similarity=0.175  Sum_probs=68.4

Q ss_pred             ccEEEEeChhhHHHHH--hhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEEEe-------
Q 033065           18 LAVDCFTFSSSIADHL--SSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR-KHLYCA-------   87 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~--~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~-g~~~~~-------   87 (128)
                      .+..+.+|.|+ .+++  .++.++|||||.+|++|++++|+|+|.+|..    .+|..||+++++. |+++.+       
T Consensus       337 ~~g~v~~W~PQ-~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~----~DQ~~Na~~~~~~~gvGv~l~~~~~~~  411 (480)
T PLN02555        337 DKGKIVQWCPQ-EKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQW----GDQVTDAVYLVDVFKTGVRLCRGEAEN  411 (480)
T ss_pred             CceEEEecCCH-HHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCc----cccHHHHHHHHHHhCceEEccCCcccc
Confidence            36778899998 5788  7788999999999999999999999999996    7899999999987 888543       


Q ss_pred             ---ChHHHHHHHHhcc
Q 033065           88 ---HPQSLHQVIVGMD  100 (128)
Q Consensus        88 ---~~~~l~~~i~~l~  100 (128)
                         +.+++.++|++++
T Consensus       412 ~~v~~~~v~~~v~~vm  427 (480)
T PLN02555        412 KLITREEVAECLLEAT  427 (480)
T ss_pred             CcCcHHHHHHHHHHHh
Confidence               5788999998886

>PLN02764 glycosyltransferase family protein

Probab=99.20  E-value=5.5e-11  Score=97.48  Aligned_cols=79  Identities=23%  Similarity=0.154  Sum_probs=67.8

Q ss_pred             ccEEEEeChhhHHHHHhhc--cEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEE--------
Q 033065           18 LAVDCFTFSSSIADHLSSA--SLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD-RKHLYC--------   86 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~a--dlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~-~g~~~~--------   86 (128)
                      -.+.+.+|.|+ .++++..  .++|||||.||++|++++|+|+|.+|..    .+|..||+++++ .|+++.        
T Consensus       317 rG~v~~~W~PQ-~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~----~DQ~~na~~l~~~~g~gv~~~~~~~~~  391 (453)
T PLN02764        317 RGVVWGGWVQQ-PLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQL----GDQVLNTRLLSDELKVSVEVAREETGW  391 (453)
T ss_pred             CCcEEeCCCCH-HHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcc----cchHHHHHHHHHHhceEEEeccccCCc
Confidence            35677799998 5888875  5699999999999999999999999996    789999999965 687764        


Q ss_pred             eChHHHHHHHHhcch
Q 033065           87 AHPQSLHQVIVGMDL  101 (128)
Q Consensus        87 ~~~~~l~~~i~~l~~  101 (128)
                      ++.+++++++++++.
T Consensus       392 ~~~e~i~~av~~vm~  406 (453)
T PLN02764        392 FSKESLRDAINSVMK  406 (453)
T ss_pred             cCHHHHHHHHHHHhc
Confidence            377899999999874

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=99.19  E-value=4.1e-11  Score=98.75  Aligned_cols=77  Identities=21%  Similarity=0.196  Sum_probs=65.3

Q ss_pred             cEEEEeChhhHHHHHhh--ccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe--------
Q 033065           19 AVDCFTFSSSIADHLSS--ASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD-RKHLYCA--------   87 (128)
Q Consensus        19 ~~~v~~f~~~~~~~~~~--adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~-~g~~~~~--------   87 (128)
                      ++.+.+|.|+ .++++.  ++++|||||.||++|++++|+|+|++|..    .+|..||+++.+ .|+|+.+        
T Consensus       344 g~~v~~w~PQ-~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~----~DQ~~na~~v~~~~gvG~~~~~~~~~~~  418 (477)
T PLN02863        344 GLVIRGWAPQ-VAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMA----ADQFVNASLLVDELKVAVRVCEGADTVP  418 (477)
T ss_pred             CEEecCCCCH-HHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCcc----ccchhhHHHHHHhhceeEEeccCCCCCc
Confidence            5778899998 578876  78999999999999999999999999996    689999999875 5888543        


Q ss_pred             ChHHHHHHHHhcc
Q 033065           88 HPQSLHQVIVGMD  100 (128)
Q Consensus        88 ~~~~l~~~i~~l~  100 (128)
                      +.+++.+++.+++
T Consensus       419 ~~~~v~~~v~~~m  431 (477)
T PLN02863        419 DSDELARVFMESV  431 (477)
T ss_pred             CHHHHHHHHHHHh
Confidence            5677888887765

>PLN00414 glycosyltransferase family protein

Probab=99.19  E-value=8.5e-11  Score=96.18  Aligned_cols=78  Identities=15%  Similarity=0.150  Sum_probs=67.0

Q ss_pred             cEEEEeChhhHHHHHhhc--cEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHH-hCCCEEE--------e
Q 033065           19 AVDCFTFSSSIADHLSSA--SLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELA-DRKHLYC--------A   87 (128)
Q Consensus        19 ~~~v~~f~~~~~~~~~~a--dlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~-~~g~~~~--------~   87 (128)
                      ...+.+|.|+ .++++.+  +++|||||.||++|++++|+|+|.+|..    .||..||+++. +.|+++.        .
T Consensus       313 g~vv~~w~PQ-~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~----~dQ~~na~~~~~~~g~g~~~~~~~~~~~  387 (446)
T PLN00414        313 GIVWEGWVEQ-PLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQL----ADQVLITRLLTEELEVSVKVQREDSGWF  387 (446)
T ss_pred             CeEEeccCCH-HHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcc----cchHHHHHHHHHHhCeEEEeccccCCcc
Confidence            4566799998 5899777  6799999999999999999999999996    78999999996 5688854        3


Q ss_pred             ChHHHHHHHHhcch
Q 033065           88 HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ~~~~l~~~i~~l~~  101 (128)
                      +.+++++++++++.
T Consensus       388 ~~~~i~~~v~~~m~  401 (446)
T PLN00414        388 SKESLRDTVKSVMD  401 (446)
T ss_pred             CHHHHHHHHHHHhc
Confidence            67889999998874

>PLN00164 glucosyltransferase; Provisional

Probab=99.17  E-value=8.9e-11  Score=96.81  Aligned_cols=78  Identities=19%  Similarity=0.155  Sum_probs=67.0

Q ss_pred             cEEEEeChhhHHHHHhhcc--EEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe--------
Q 033065           19 AVDCFTFSSSIADHLSSAS--LVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD-RKHLYCA--------   87 (128)
Q Consensus        19 ~~~v~~f~~~~~~~~~~ad--lvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~-~g~~~~~--------   87 (128)
                      .+.+.+|.|+ .+++..++  ++|||||.||++|++++|+|+|.+|..    .||..||+++.+ .|+++.+        
T Consensus       340 g~~v~~w~PQ-~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~----~DQ~~Na~~~~~~~gvG~~~~~~~~~~~  414 (480)
T PLN00164        340 GLVWPTWAPQ-KEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLY----AEQHLNAFELVADMGVAVAMKVDRKRDN  414 (480)
T ss_pred             CeEEeecCCH-HHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCcc----ccchhHHHHHHHHhCeEEEeccccccCC
Confidence            4677799998 68888877  799999999999999999999999996    789999998865 6888643        


Q ss_pred             --ChHHHHHHHHhcch
Q 033065           88 --HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 --~~~~l~~~i~~l~~  101 (128)
                        +.+++.++|++++.
T Consensus       415 ~~~~e~l~~av~~vm~  430 (480)
T PLN00164        415 FVEAAELERAVRSLMG  430 (480)
T ss_pred             cCcHHHHHHHHHHHhc
Confidence              56889999988863

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=99.15  E-value=3.2e-10  Score=87.97  Aligned_cols=73  Identities=26%  Similarity=0.286  Sum_probs=63.5

Q ss_pred             hHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHHHHHHHHhcch
Q 033065           28 SIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQSLHQVIVGMDL  101 (128)
Q Consensus        28 ~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~l~~~i~~l~~  101 (128)
                      ++.++|+.||++|+++|.+|+.|++++|+|+|++|.+... .+|..+++.+.+.+.++.+     +++.|.+++.+++.
T Consensus       243 ~~~~~l~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~-~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~  320 (348)
T TIGR01133       243 NMAAAYAAADLVISRAGASTVAELAAAGVPAILIPYPYAA-DDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL  320 (348)
T ss_pred             CHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEeeCCCCc-cchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc
Confidence            7999999999999999988999999999999999876543 4688999999998888664     38899999988763

RL J Bacteriol 1993 Mar;175(6):1841-3

>PLN02167 UDP-glycosyltransferase family protein

Probab=99.15  E-value=9.1e-11  Score=96.57  Aligned_cols=76  Identities=14%  Similarity=0.122  Sum_probs=64.4

Q ss_pred             EEEeChhhHHHHHhh--ccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHH-HHhCCCEEE-----------
Q 033065           21 DCFTFSSSIADHLSS--ASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEE-LADRKHLYC-----------   86 (128)
Q Consensus        21 ~v~~f~~~~~~~~~~--adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~-l~~~g~~~~-----------   86 (128)
                      .+.+|.|+ .++++.  ++++|||||.||++|++++|+|+|.+|..    .+|..||++ +++.|+++.           
T Consensus       343 ~v~~w~PQ-~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~----~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~  417 (475)
T PLN02167        343 LVCGWAPQ-VEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMY----AEQQLNAFTMVKELGLAVELRLDYVSAYGE  417 (475)
T ss_pred             eeeccCCH-HHHhcCcccCeEEeeCCcccHHHHHHcCCCEEecccc----ccchhhHHHHHHHhCeeEEeecccccccCC
Confidence            57799998 688877  55899999999999999999999999996    789999986 567788853           


Q ss_pred             -eChHHHHHHHHhcch
Q 033065           87 -AHPQSLHQVIVGMDL  101 (128)
Q Consensus        87 -~~~~~l~~~i~~l~~  101 (128)
                       .+.+++.++|++++.
T Consensus       418 ~~~~~~l~~av~~~m~  433 (475)
T PLN02167        418 IVKADEIAGAVRSLMD  433 (475)
T ss_pred             cccHHHHHHHHHHHhc
Confidence             267788888888864

>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]

Probab=99.11  E-value=1.9e-10  Score=93.71  Aligned_cols=78  Identities=17%  Similarity=0.078  Sum_probs=62.8

Q ss_pred             ccEEEEeChhhHHHH--HhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChH
Q 033065           18 LAVDCFTFSSSIADH--LSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQ   90 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~--~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~   90 (128)
                      .++...+|.|+.+.+  -++-.++|||||.||++|++++|+|+|.+|..    .+|..||++++++|.+.+.     +..
T Consensus       335 ~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf----~DQ~~Na~~i~~~g~~~v~~~~~~~~~  410 (496)
T KOG1192|consen  335 GNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLF----GDQPLNARLLVRHGGGGVLDKRDLVSE  410 (496)
T ss_pred             CceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCcc----ccchhHHHHHHhCCCEEEEehhhcCcH
Confidence            368888999996544  44567999999999999999999999999997    7899999999999998764     222


Q ss_pred             HHHHHHHhc
Q 033065           91 SLHQVIVGM   99 (128)
Q Consensus        91 ~l~~~i~~l   99 (128)
                      .+.+++.++
T Consensus       411 ~~~~~~~~i  419 (496)
T KOG1192|consen  411 ELLEAIKEI  419 (496)
T ss_pred             HHHHHHHHH
Confidence            245555554

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=99.09  E-value=6.9e-11  Score=94.73  Aligned_cols=81  Identities=15%  Similarity=0.171  Sum_probs=68.0

Q ss_pred             EEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEE----eCCCCCCch-----HHHHHHHHHhCCCEEE-----
Q 033065           21 DCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVV----VNEDLMDNH-----QSELAEELADRKHLYC-----   86 (128)
Q Consensus        21 ~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~v----P~~~~~~~~-----Q~~nA~~l~~~g~~~~-----   86 (128)
                      ++..|..++.++|+.||++|+++|+.|+ |++++|+|+|++    |+++.+..+     |..|+..+.+++++..     
T Consensus       253 ~v~~~~~~~~~~l~aADl~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~  331 (385)
T TIGR00215       253 QLHLIDGDARKAMFAADAALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEE  331 (385)
T ss_pred             cEEEECchHHHHHHhCCEEeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCC
Confidence            4444555789999999999999999888 999999999999    887666666     8889999999998844     


Q ss_pred             eChHHHHHHHHhcchh
Q 033065           87 AHPQSLHQVIVGMDLK  102 (128)
Q Consensus        87 ~~~~~l~~~i~~l~~~  102 (128)
                      .+++.|.+.+.+++..
T Consensus       332 ~~~~~l~~~~~~ll~~  347 (385)
T TIGR00215       332 CTPHPLAIALLLLLEN  347 (385)
T ss_pred             CCHHHHHHHHHHHhcC
Confidence            3789999999888753

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>PLN02534 UDP-glycosyltransferase

Probab=98.99  E-value=1.3e-09  Score=90.30  Aligned_cols=80  Identities=13%  Similarity=0.055  Sum_probs=67.2

Q ss_pred             cccEEEEeChhhHHHHHhhccE--EEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEE--------
Q 033065           17 LLAVDCFTFSSSIADHLSSASL--VISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR-KHLY--------   85 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adl--vIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~-g~~~--------   85 (128)
                      +.++.+.+|.++ .++++.+++  +|||||.+|++|++++|+|+|.+|..    .+|..||+++.+. |.|+        
T Consensus       343 ~~g~~v~~w~pq-~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~----~dq~~na~~~~e~~~vGv~~~~~~~~  417 (491)
T PLN02534        343 GRGLLIKGWAPQ-VLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLF----AEQFLNEKLIVEVLRIGVRVGVEVPV  417 (491)
T ss_pred             cCCeeccCCCCH-HHHhcCCccceEEecCccHHHHHHHHcCCCEEecccc----ccHHHHHHHHHHhhcceEEecccccc
Confidence            346778899998 689999887  99999999999999999999999996    6899999999843 4432        


Q ss_pred             ----------EeChHHHHHHHHhcch
Q 033065           86 ----------CAHPQSLHQVIVGMDL  101 (128)
Q Consensus        86 ----------~~~~~~l~~~i~~l~~  101 (128)
                                ..+.+++.++|++++.
T Consensus       418 ~~~~~~~~~~~v~~eev~~~v~~~m~  443 (491)
T PLN02534        418 RWGDEERVGVLVKKDEVEKAVKTLMD  443 (491)
T ss_pred             cccccccccCccCHHHHHHHHHHHhc
Confidence                      2467889999988873

>PLN03015 UDP-glucosyl transferase

Probab=98.98  E-value=1.9e-09  Score=88.83  Aligned_cols=76  Identities=18%  Similarity=0.159  Sum_probs=65.0

Q ss_pred             EEEEeChhhHHHHHhhcc--EEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHH-HhCCCEEE---------e
Q 033065           20 VDCFTFSSSIADHLSSAS--LVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEEL-ADRKHLYC---------A   87 (128)
Q Consensus        20 ~~v~~f~~~~~~~~~~ad--lvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l-~~~g~~~~---------~   87 (128)
                      +.+.+|.|+ .++++...  .+|||||.+|++|++++|+|+|.+|..    .+|..||+++ +..|+++.         +
T Consensus       337 l~v~~W~PQ-~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~----~DQ~~na~~~~~~~gvg~~~~~~~~~~~v  411 (470)
T PLN03015        337 LVVTQWAPQ-VEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLY----AEQWMNATLLTEEIGVAVRTSELPSEKVI  411 (470)
T ss_pred             eEEEecCCH-HHHhccCccCeEEecCCchhHHHHHHcCCCEEecccc----cchHHHHHHHHHHhCeeEEecccccCCcc
Confidence            677899998 47888765  599999999999999999999999996    7899999999 45677743         3


Q ss_pred             ChHHHHHHHHhcc
Q 033065           88 HPQSLHQVIVGMD  100 (128)
Q Consensus        88 ~~~~l~~~i~~l~  100 (128)
                      +.+++.++|++++
T Consensus       412 ~~e~i~~~v~~lm  424 (470)
T PLN03015        412 GREEVASLVRKIV  424 (470)
T ss_pred             CHHHHHHHHHHHH
Confidence            6778888998887

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=98.94  E-value=8.7e-10  Score=86.88  Aligned_cols=98  Identities=15%  Similarity=0.231  Sum_probs=68.3

Q ss_pred             ChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeC----CCCCCchHHHH-----HHHHHhCCCEE--E---eChH
Q 033065           25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVN----EDLMDNHQSEL-----AEELADRKHLY--C---AHPQ   90 (128)
Q Consensus        25 f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~----~~~~~~~Q~~n-----A~~l~~~g~~~--~---~~~~   90 (128)
                      +.+++.++|+.||++|+.+|.+|+ |++++|+|+|++|.    ++.+++||..|     ++.+.+.+.+.  .   .+++
T Consensus       251 ~~~~~~~~~~~aDl~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  329 (380)
T PRK00025        251 LDGQKREAMAAADAALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPE  329 (380)
T ss_pred             EcccHHHHHHhCCEEEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHH
Confidence            446799999999999999999877 99999999999954    43445566543     34444444331  1   3788


Q ss_pred             HHHHHHHhcchh---------c----CCCCCCCChHHHHHHHHHhc
Q 033065           91 SLHQVIVGMDLK---------S----LLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        91 ~l~~~i~~l~~~---------~----~~~~~~~~~~~i~~~i~~~~  123 (128)
                      .|.+.+.+++++         .    .+...+++++.+++.|.+.+
T Consensus       330 ~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~  375 (380)
T PRK00025        330 KLARALLPLLADGARRQALLEGFTELHQQLRCGADERAAQAVLELL  375 (380)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Confidence            898888877531         0    01114567888888887764

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=98.92  E-value=2.6e-09  Score=82.51  Aligned_cols=80  Identities=23%  Similarity=0.305  Sum_probs=68.0

Q ss_pred             CcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe----ChHH
Q 033065           16 GLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA----HPQS   91 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~----~~~~   91 (128)
                      ..+++..+-+.++|+++|..||+.|+.||. |++|++..|+|.+++|..    .+|...|+.++..|+....    ..+.
T Consensus       208 ~~~~i~~~~~~~dma~LMke~d~aI~AaGs-tlyEa~~lgvP~l~l~~a----~NQ~~~a~~f~~lg~~~~l~~~l~~~~  282 (318)
T COG3980         208 KYPNINLYIDTNDMAELMKEADLAISAAGS-TLYEALLLGVPSLVLPLA----ENQIATAKEFEALGIIKQLGYHLKDLA  282 (318)
T ss_pred             hCCCeeeEecchhHHHHHHhcchheeccch-HHHHHHHhcCCceEEeee----ccHHHHHHHHHhcCchhhccCCCchHH
Confidence            357899999999999999999999999995 999999999999999986    5799999999999998653    4455


Q ss_pred             HHHHHHhcc
Q 033065           92 LHQVIVGMD  100 (128)
Q Consensus        92 l~~~i~~l~  100 (128)
                      +...+.++.
T Consensus       283 ~~~~~~~i~  291 (318)
T COG3980         283 KDYEILQIQ  291 (318)
T ss_pred             HHHHHHHhh
Confidence            555555554

>PRK14089 ipid-A-disaccharide synthase; Provisional

Probab=98.53  E-value=9.5e-08  Score=76.12  Aligned_cols=93  Identities=17%  Similarity=0.213  Sum_probs=65.3

Q ss_pred             ChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC---CCE-EE--------------
Q 033065           25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR---KHL-YC--------------   86 (128)
Q Consensus        25 f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~---g~~-~~--------------   86 (128)
                      +++++.++|+.||++|+.+|+.|+ |++.+|+|+|+. +.  ++.+|..+|+++.+.   |+. ++              
T Consensus       225 ~~~~~~~~m~~aDlal~~SGT~TL-E~al~g~P~Vv~-Yk--~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEll  300 (347)
T PRK14089        225 ISYDTHKALLEAEFAFICSGTATL-EAALIGTPFVLA-YK--AKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELL  300 (347)
T ss_pred             EeccHHHHHHhhhHHHhcCcHHHH-HHHHhCCCEEEE-Ee--CCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhh
Confidence            345778999999999999999888 999999999994 32  368999999999943   332 11              


Q ss_pred             ---eChHHHHHHHHhcchh--------cCCCCCCCChHHHHHHHHH
Q 033065           87 ---AHPQSLHQVIVGMDLK--------SLLPYQPGDATPVAKLINR  121 (128)
Q Consensus        87 ---~~~~~l~~~i~~l~~~--------~~~~~~~~~~~~i~~~i~~  121 (128)
                         .+++.+.+.+.+...+        ..+...+++++.+++.|.+
T Consensus       301 Q~~~t~~~la~~i~~~~~~~~~~~~~~l~~~l~~~a~~~~A~~i~~  346 (347)
T PRK14089        301 QEFVTVENLLKAYKEMDREKFFKKSKELREYLKHGSAKNVAKILKE  346 (347)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhc
Confidence               2677777777553111        1111123667777777765

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=98.47  E-value=5.9e-07  Score=70.10  Aligned_cols=93  Identities=17%  Similarity=0.219  Sum_probs=66.6

Q ss_pred             ccEEEEeC--hhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChHHHH
Q 033065           18 LAVDCFTF--SSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--HPQSLH   93 (128)
Q Consensus        18 ~~~~v~~f--~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--~~~~l~   93 (128)
                      .++++.++  .++|..+|..||++|+.+| |.+.|++++|+|+|.++..      |.  +..+.+.|.++..  +++.+.
T Consensus       258 ~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg-gi~~Ea~~~g~PvI~~~~~------~~--~~~~~~~g~~~~~~~~~~~i~  328 (363)
T cd03786         258 PNVLLISPLGYLYFLLLLKNADLVLTDSG-GIQEEASFLGVPVLNLRDR------TE--RPETVESGTNVLVGTDPEAIL  328 (363)
T ss_pred             CCEEEECCcCHHHHHHHHHcCcEEEEcCc-cHHhhhhhcCCCEEeeCCC------Cc--cchhhheeeEEecCCCHHHHH
Confidence            46777644  5679999999999999999 7788999999999998632      32  3356677877654  578999


Q ss_pred             HHHHhcchhc-----C--CCC-CCCChHHHHHHH
Q 033065           94 QVIVGMDLKS-----L--LPY-QPGDATPVAKLI  119 (128)
Q Consensus        94 ~~i~~l~~~~-----~--~~~-~~~~~~~i~~~i  119 (128)
                      +++.+++...     .  ++| ..+++++|+++|
T Consensus       329 ~~i~~ll~~~~~~~~~~~~~~~~~~a~~~I~~~l  362 (363)
T cd03786         329 AAIEKLLSDEFAYSLMSINPYGDGNASERIVEIL  362 (363)
T ss_pred             HHHHHHhcCchhhhcCCCCCCCCCHHHHHHHHHh
Confidence            9998886421     1  222 234566777665

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=98.16  E-value=1.2e-05  Score=64.58  Aligned_cols=79  Identities=14%  Similarity=0.078  Sum_probs=61.5

Q ss_pred             cEEEEeChhhHHHHHhhccEEEec-----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChHHH
Q 033065           19 AVDCFTFSSSIADHLSSASLVISH-----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC-AHPQSL   92 (128)
Q Consensus        19 ~~~v~~f~~~~~~~~~~adlvIth-----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~-~~~~~l   92 (128)
                      ++.+.++..+|..+|+.||+++..     +|..++.|++++|+|+|.-|..    ..+.+..+.+.+.|+++. .++++|
T Consensus       303 ~v~l~~~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~----~~~~e~~~~~~~~g~~~~~~d~~~L  378 (425)
T PRK05749        303 DVLLGDTMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHT----FNFKEIFERLLQAGAAIQVEDAEDL  378 (425)
T ss_pred             cEEEEecHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCc----cCHHHHHHHHHHCCCeEEECCHHHH
Confidence            456666778899999999985431     3445799999999999998875    346677777777888765 488999


Q ss_pred             HHHHHhcch
Q 033065           93 HQVIVGMDL  101 (128)
Q Consensus        93 ~~~i~~l~~  101 (128)
                      .++|.++++
T Consensus       379 a~~l~~ll~  387 (425)
T PRK05749        379 AKAVTYLLT  387 (425)
T ss_pred             HHHHHHHhc
Confidence            999988753

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.08  E-value=2.5e-05  Score=58.70  Aligned_cols=77  Identities=16%  Similarity=0.254  Sum_probs=58.7

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCc----hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---Ch
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAG----SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---HP   89 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG----~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~~   89 (128)
                      ..++++.++.+++.++|++||++|.-+.    .+++.|++++|+|+|.-+.+    +    ..+.+.+.+.+++.   ++
T Consensus       245 ~~~v~~~g~~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~----~~~~i~~~~~g~~~~~~~~  316 (359)
T cd03808         245 EGRVEFLGFRDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVP----G----CREAVIDGVNGFLVPPGDA  316 (359)
T ss_pred             cceEEEeeccccHHHHHHhccEEEecCcccCcchHHHHHHHcCCCEEEecCC----C----chhhhhcCcceEEECCCCH
Confidence            4578999998899999999999997653    57999999999999997664    2    22344444455443   68


Q ss_pred             HHHHHHHHhcch
Q 033065           90 QSLHQVIVGMDL  101 (128)
Q Consensus        90 ~~l~~~i~~l~~  101 (128)
                      +++.++|.+++.
T Consensus       317 ~~~~~~i~~l~~  328 (359)
T cd03808         317 EALADAIERLIE  328 (359)
T ss_pred             HHHHHHHHHHHh
Confidence            889999888753

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=98.07  E-value=4.9e-05  Score=59.90  Aligned_cols=95  Identities=12%  Similarity=0.178  Sum_probs=66.0

Q ss_pred             ccEEEEeChh--hHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChHHHH
Q 033065           18 LAVDCFTFSS--SIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--HPQSLH   93 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--~~~~l~   93 (128)
                      .++++.++..  ++..+|+.||++|+.+|. .+.|++++|+|+|.++...   +.|+     +.+.|.++.+  +++++.
T Consensus       255 ~~v~~~~~~~~~~~~~~l~~ad~vv~~Sg~-~~~EA~a~g~PvI~~~~~~---~~~e-----~~~~g~~~lv~~d~~~i~  325 (365)
T TIGR00236       255 KRVHLIEPLEYLDFLNLAANSHLILTDSGG-VQEEAPSLGKPVLVLRDTT---ERPE-----TVEAGTNKLVGTDKENIT  325 (365)
T ss_pred             CCEEEECCCChHHHHHHHHhCCEEEECChh-HHHHHHHcCCCEEECCCCC---CChH-----HHhcCceEEeCCCHHHHH
Confidence            3677776553  467889999999999985 5799999999999986531   2232     2334555443  789999


Q ss_pred             HHHHhcchh---------cCCCC-CCCChHHHHHHHHH
Q 033065           94 QVIVGMDLK---------SLLPY-QPGDATPVAKLINR  121 (128)
Q Consensus        94 ~~i~~l~~~---------~~~~~-~~~~~~~i~~~i~~  121 (128)
                      +++.++++.         ..+++ ..+++++|++.|.+
T Consensus       326 ~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~  363 (365)
T TIGR00236       326 KAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELLN  363 (365)
T ss_pred             HHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence            999887631         12233 33567888888875

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.00  E-value=4.4e-05  Score=58.03  Aligned_cols=77  Identities=13%  Similarity=0.186  Sum_probs=57.8

Q ss_pred             cccEEEEeCh--hhHHHHHhhccEEEecCc----hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---
Q 033065           17 LLAVDCFTFS--SSIADHLSSASLVISHAG----SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---   87 (128)
Q Consensus        17 ~~~~~v~~f~--~~~~~~~~~adlvIthaG----~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---   87 (128)
                      ..++++.+++  +++.++|+.||++|..+.    .+++.|++++|+|+|.-+.+    +    +.+.+.+.+.++..   
T Consensus       246 ~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~----~----~~~~i~~~~~g~~~~~~  317 (364)
T cd03814         246 YPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAG----G----PADIVTDGENGLLVEPG  317 (364)
T ss_pred             CCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCC----C----chhhhcCCcceEEcCCC
Confidence            4578899975  469999999999997764    37899999999999998865    2    23344545566553   


Q ss_pred             ChHHHHHHHHhcch
Q 033065           88 HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ~~~~l~~~i~~l~~  101 (128)
                      +.+++.+.|.++..
T Consensus       318 ~~~~l~~~i~~l~~  331 (364)
T cd03814         318 DAEAFAAALAALLA  331 (364)
T ss_pred             CHHHHHHHHHHHHc
Confidence            56778888888753

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=97.98  E-value=4.1e-05  Score=57.29  Aligned_cols=77  Identities=14%  Similarity=0.177  Sum_probs=58.2

Q ss_pred             cccEEEEeCh--hhHHHHHhhccEEEec----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---
Q 033065           17 LLAVDCFTFS--SSIADHLSSASLVISH----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---   87 (128)
Q Consensus        17 ~~~~~v~~f~--~~~~~~~~~adlvIth----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---   87 (128)
                      ..++++.+++  +++.++|+.||++|.-    +..+++.|++++|+|+|..+.+.        ..+.+.+.+.++..   
T Consensus       255 ~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~--------~~~~~~~~~~g~~~~~~  326 (374)
T cd03801         255 GDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGG--------IPEVVEDGETGLLVPPG  326 (374)
T ss_pred             CcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCCC--------hhHHhcCCcceEEeCCC
Confidence            4578999999  7899999999999953    44579999999999999887641        33444444555443   


Q ss_pred             ChHHHHHHHHhcch
Q 033065           88 HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ~~~~l~~~i~~l~~  101 (128)
                      +++++.+.|.++..
T Consensus       327 ~~~~l~~~i~~~~~  340 (374)
T cd03801         327 DPEALAEAILRLLD  340 (374)
T ss_pred             CHHHHHHHHHHHHc
Confidence            57889999888743

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.98  E-value=3.3e-05  Score=58.52  Aligned_cols=77  Identities=17%  Similarity=0.097  Sum_probs=57.9

Q ss_pred             cccEEEEeCh--hhHHHHHhhccEEEe-----cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--
Q 033065           17 LLAVDCFTFS--SSIADHLSSASLVIS-----HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--   87 (128)
Q Consensus        17 ~~~~~v~~f~--~~~~~~~~~adlvIt-----haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--   87 (128)
                      ..++++.+|+  +++.++|++||++|.     -+...++.|++++|+|+|.-+.+    .    ..+.+.+.+.++..  
T Consensus       242 ~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~----~~e~i~~~~~g~~~~~  313 (359)
T cd03823         242 DPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIG----G----MAELVRDGVNGLLFPP  313 (359)
T ss_pred             CCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCC----C----HHHHhcCCCcEEEECC
Confidence            4688999998  679999999999994     23445899999999999987654    2    33445554455553  


Q ss_pred             -ChHHHHHHHHhcch
Q 033065           88 -HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 -~~~~l~~~i~~l~~  101 (128)
                       +.+++.+++.++.+
T Consensus       314 ~d~~~l~~~i~~l~~  328 (359)
T cd03823         314 GDAEDLAAALERLID  328 (359)
T ss_pred             CCHHHHHHHHHHHHh
Confidence             57889999888864

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.94  E-value=5.2e-05  Score=56.66  Aligned_cols=77  Identities=16%  Similarity=0.203  Sum_probs=57.3

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCc----hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCC-CEEEe---C
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAG----SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRK-HLYCA---H   88 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG----~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g-~~~~~---~   88 (128)
                      ..++.+.++.+++.++|++||++|.-+.    ..++.|++++|+|+|.-+..    ..+.    .+.+.+ .++..   +
T Consensus       234 ~~~v~~~g~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~~----~~~~~~~~g~~~~~~~  305 (348)
T cd03820         234 EDRVILLGFTKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCP----TGPS----EIIEDGVNGLLVPNGD  305 (348)
T ss_pred             CCeEEEcCCcchHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEEEecCC----CchH----hhhccCcceEEeCCCC
Confidence            4578888888889999999999998762    46899999999999987654    1222    233343 55443   6


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      ++++.++|.++++
T Consensus       306 ~~~~~~~i~~ll~  318 (348)
T cd03820         306 VEALAEALLRLME  318 (348)
T ss_pred             HHHHHHHHHHHHc
Confidence            6889999988854

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.93  E-value=0.00014  Score=50.85  Aligned_cols=79  Identities=14%  Similarity=0.097  Sum_probs=58.6

Q ss_pred             CcccEEEEeChh--hHHHHHhhccEEEec----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--
Q 033065           16 GLLAVDCFTFSS--SIADHLSSASLVISH----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--   87 (128)
Q Consensus        16 ~~~~~~v~~f~~--~~~~~~~~adlvIth----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--   87 (128)
                      ...+++++++.+  ++.++++.||++|+-    +...++.|++++|+|+|+-..+        .+.+.+.....++..  
T Consensus        71 ~~~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~--------~~~e~~~~~~~g~~~~~  142 (172)
T PF00534_consen   71 LKENIIFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIG--------GNNEIINDGVNGFLFDP  142 (172)
T ss_dssp             CGTTEEEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESST--------HHHHHSGTTTSEEEEST
T ss_pred             ccccccccccccccccccccccceeccccccccccccccccccccccceeecccc--------CCceeeccccceEEeCC
Confidence            345789999997  899999999999987    5667999999999999976543        234455555556554  


Q ss_pred             -ChHHHHHHHHhcchh
Q 033065           88 -HPQSLHQVIVGMDLK  102 (128)
Q Consensus        88 -~~~~l~~~i~~l~~~  102 (128)
                       +.+++.++|.+++..
T Consensus       143 ~~~~~l~~~i~~~l~~  158 (172)
T PF00534_consen  143 NDIEELADAIEKLLND  158 (172)
T ss_dssp             TSHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCC
Confidence             668999999888753

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.90  E-value=5.8e-05  Score=56.91  Aligned_cols=76  Identities=17%  Similarity=0.195  Sum_probs=56.6

Q ss_pred             ccEEEEeChhhHHHHHhhccEEEecCc----hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChHHH
Q 033065           18 LAVDCFTFSSSIADHLSSASLVISHAG----SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC-AHPQSL   92 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adlvIthaG----~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~-~~~~~l   92 (128)
                      .++.+.++.+++..+|+.||++|..+.    .+++.|++++|+|+|+...+    +    ..+.+.+.|..+. .+++++
T Consensus       251 ~~v~~~g~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~----~----~~e~~~~~g~~~~~~~~~~l  322 (365)
T cd03807         251 DKVILLGERSDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVG----D----NAELVGDTGFLVPPGDPEAL  322 (365)
T ss_pred             ceEEEccccccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCC----C----hHHHhhcCCEEeCCCCHHHH
Confidence            467888888899999999999997654    37999999999999987654    2    2233333444433 278889


Q ss_pred             HHHHHhcch
Q 033065           93 HQVIVGMDL  101 (128)
Q Consensus        93 ~~~i~~l~~  101 (128)
                      .++|.++++
T Consensus       323 ~~~i~~l~~  331 (365)
T cd03807         323 AEAIEALLA  331 (365)
T ss_pred             HHHHHHHHh
Confidence            999888864

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=97.84  E-value=5.5e-05  Score=57.98  Aligned_cols=76  Identities=16%  Similarity=0.175  Sum_probs=58.2

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCc----hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAG----SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC-AHPQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG----~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~-~~~~~   91 (128)
                      ..++++.++.+++.++|+.||++|.-+.    ..++.|++++|+|+|+-..+        ...+.+.+.|..+. .++++
T Consensus       244 ~~~v~~~g~~~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~--------~~~e~i~~~g~~~~~~~~~~  315 (360)
T cd04951         244 SNRVKLLGLRDDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAG--------GVREVVGDSGLIVPISDPEA  315 (360)
T ss_pred             CCcEEEecccccHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecCC--------ChhhEecCCceEeCCCCHHH
Confidence            3578999999999999999999998764    57899999999999986543        12333444454433 37888


Q ss_pred             HHHHHHhcc
Q 033065           92 LHQVIVGMD  100 (128)
Q Consensus        92 l~~~i~~l~  100 (128)
                      +.++|.+++
T Consensus       316 ~~~~i~~ll  324 (360)
T cd04951         316 LANKIDEIL  324 (360)
T ss_pred             HHHHHHHHH
Confidence            999998885

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=97.83  E-value=5.2e-05  Score=51.12  Aligned_cols=76  Identities=17%  Similarity=0.198  Sum_probs=49.5

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecC-----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eCh
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHA-----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC--AHP   89 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvItha-----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~--~~~   89 (128)
                      ..++++.++++++.+++++||++|.-.     -.+++.|++++|+|+|.-+..         .....+..+.+.+  -++
T Consensus        52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~---------~~~~~~~~~~~~~~~~~~  122 (135)
T PF13692_consen   52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG---------AEGIVEEDGCGVLVANDP  122 (135)
T ss_dssp             HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH---------CHCHS---SEEEE-TT-H
T ss_pred             CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc---------hhhheeecCCeEEECCCH
Confidence            458999999999999999999988732     248999999999999997641         1122222344433  388


Q ss_pred             HHHHHHHHhcch
Q 033065           90 QSLHQVIVGMDL  101 (128)
Q Consensus        90 ~~l~~~i~~l~~  101 (128)
                      +++.++|.++..
T Consensus       123 ~~l~~~i~~l~~  134 (135)
T PF13692_consen  123 EELAEAIERLLN  134 (135)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            999999988754

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=97.79  E-value=0.00027  Score=56.28  Aligned_cols=88  Identities=20%  Similarity=0.179  Sum_probs=61.9

Q ss_pred             HHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChHHHHHHHHhcchhcCCCC
Q 033065           29 IADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC-AHPQSLHQVIVGMDLKSLLPY  107 (128)
Q Consensus        29 ~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~-~~~~~l~~~i~~l~~~~~~~~  107 (128)
                      ..+++..||++|+-|| +...||+.+|+|+|.+ ++    +.-...-+++.++|.... .+++++.+.+.+......+..
T Consensus       242 ~~~Ll~~a~l~Ig~gg-TMa~EAA~LGtPaIs~-~~----g~~~~vd~~L~~~Gll~~~~~~~ei~~~v~~~~~~~~~~~  315 (335)
T PF04007_consen  242 GLDLLYYADLVIGGGG-TMAREAALLGTPAISC-FP----GKLLAVDKYLIEKGLLYHSTDPDEIVEYVRKNLGKRKKIR  315 (335)
T ss_pred             HHHHHHhcCEEEeCCc-HHHHHHHHhCCCEEEe-cC----CcchhHHHHHHHCCCeEecCCHHHHHHHHHHhhhcccchh
Confidence            4589999999999999 6899999999999987 33    222345577888998655 488888887776654333222


Q ss_pred             C---CCChHHHHHHHHHh
Q 033065          108 Q---PGDATPVAKLINRF  122 (128)
Q Consensus       108 ~---~~~~~~i~~~i~~~  122 (128)
                      .   .+-.+.|.+.|.+.
T Consensus       316 ~~~~~d~~~~i~~~i~~~  333 (335)
T PF04007_consen  316 EKKSEDPTDLIIEEIEEY  333 (335)
T ss_pred             hhhccCHHHHHHHHHHHh
Confidence            1   33455666666554

They are found in archaea and some bacteria and have no known function.

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.74  E-value=0.0002  Score=55.00  Aligned_cols=76  Identities=16%  Similarity=0.163  Sum_probs=55.7

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecC-----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHA-----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---H   88 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvItha-----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~   88 (128)
                      ..++++.+|.+++.++|+.||++|.-+     ...++.|++++|+|+|.-...    +.    .+.+.+.+.++..   +
T Consensus       245 ~~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~----~e~i~~~~~g~~~~~~~  316 (355)
T cd03819         245 QDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GA----RETVRPGETGLLVPPGD  316 (355)
T ss_pred             cceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----Cc----HHHHhCCCceEEeCCCC
Confidence            357999999989999999999999755     236999999999999987543    22    2333333345443   7


Q ss_pred             hHHHHHHHHhcc
Q 033065           89 PQSLHQVIVGMD  100 (128)
Q Consensus        89 ~~~l~~~i~~l~  100 (128)
                      ++.+.++|.+++
T Consensus       317 ~~~l~~~i~~~~  328 (355)
T cd03819         317 AEALAQALDQIL  328 (355)
T ss_pred             HHHHHHHHHHHH
Confidence            888888886543

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.73  E-value=0.00013  Score=55.18  Aligned_cols=76  Identities=14%  Similarity=0.049  Sum_probs=56.3

Q ss_pred             cccEEEEeChh--hHHHHHhhccEEEecCc----hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--C
Q 033065           17 LLAVDCFTFSS--SIADHLSSASLVISHAG----SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--H   88 (128)
Q Consensus        17 ~~~~~v~~f~~--~~~~~~~~adlvIthaG----~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--~   88 (128)
                      ..++++.+|++  ++..+|..||++|.-+-    ..++.|++++|+|+|.-+.+    +.    .+.+.. +.+++.  +
T Consensus       261 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~----~~~~~~-~~~~~~~~~  331 (375)
T cd03821         261 EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKV----PW----QELIEY-GCGWVVDDD  331 (375)
T ss_pred             cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCC----CH----HHHhhc-CceEEeCCC
Confidence            35789999987  79999999999987553    46899999999999998654    22    222223 455443  5


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      .+++.++|.++.+
T Consensus       332 ~~~~~~~i~~l~~  344 (375)
T cd03821         332 VDALAAALRRALE  344 (375)
T ss_pred             hHHHHHHHHHHHh
Confidence            6888888888864

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.72  E-value=0.00026  Score=54.17  Aligned_cols=79  Identities=18%  Similarity=0.098  Sum_probs=56.5

Q ss_pred             CcccEEEEeChhh--HHHHHhhccEEEec------CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe
Q 033065           16 GLLAVDCFTFSSS--IADHLSSASLVISH------AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA   87 (128)
Q Consensus        16 ~~~~~~v~~f~~~--~~~~~~~adlvIth------aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~   87 (128)
                      ...++++.+|+++  +.++++.||++|.-      +...++.|++++|+|+|.-..+    ........   ..+.++..
T Consensus       242 ~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~----~~~~~i~~---~~~~g~~~  314 (357)
T cd03795         242 LLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIG----TGGSYVNL---HGVTGLVV  314 (357)
T ss_pred             CcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCC----CchhHHhh---CCCceEEe
Confidence            3468999999864  88999999998832      2245899999999999997654    22222222   23444443


Q ss_pred             ---ChHHHHHHHHhcch
Q 033065           88 ---HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ---~~~~l~~~i~~l~~  101 (128)
                         +++++.++|.+++.
T Consensus       315 ~~~d~~~~~~~i~~l~~  331 (357)
T cd03795         315 PPGDPAALAEAIRRLLE  331 (357)
T ss_pred             CCCCHHHHHHHHHHHHH
Confidence               68899999998865

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=97.69  E-value=0.00017  Score=55.84  Aligned_cols=77  Identities=10%  Similarity=0.113  Sum_probs=57.6

Q ss_pred             cccEEEEeCh--hhHHHHHhhccEEEecC----------chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCE
Q 033065           17 LLAVDCFTFS--SSIADHLSSASLVISHA----------GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL   84 (128)
Q Consensus        17 ~~~~~v~~f~--~~~~~~~~~adlvItha----------G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~   84 (128)
                      ..++++.+++  +++.++|+.||++|.-+          -..++.|++++|+|+|.-+...        +++.+.+.+.+
T Consensus       244 ~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~--------~~e~i~~~~~g  315 (367)
T cd05844         244 GGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG--------IPEAVEDGETG  315 (367)
T ss_pred             CCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC--------chhheecCCee
Confidence            4578888887  45999999999988532          2579999999999999887641        34444455555


Q ss_pred             EEe---ChHHHHHHHHhcch
Q 033065           85 YCA---HPQSLHQVIVGMDL  101 (128)
Q Consensus        85 ~~~---~~~~l~~~i~~l~~  101 (128)
                      ++.   +++++.++|.++.+
T Consensus       316 ~~~~~~d~~~l~~~i~~l~~  335 (367)
T cd05844         316 LLVPEGDVAALAAALGRLLA  335 (367)
T ss_pred             EEECCCCHHHHHHHHHHHHc
Confidence            544   78899999988864

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.68  E-value=0.00027  Score=53.18  Aligned_cols=78  Identities=13%  Similarity=0.169  Sum_probs=57.9

Q ss_pred             cccEEEEeChh--hHHHHHhhccEEEec----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---
Q 033065           17 LLAVDCFTFSS--SIADHLSSASLVISH----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---   87 (128)
Q Consensus        17 ~~~~~v~~f~~--~~~~~~~~adlvIth----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---   87 (128)
                      ..++++.++++  ++.+++.+||++|.-    +..+++.|++++|+|+|+-+..    +    ..+.+.+.+.++..   
T Consensus       258 ~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~----~~~~~~~~~~g~~~~~~  329 (377)
T cd03798         258 EDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVG----G----IPEIITDGENGLLVPPG  329 (377)
T ss_pred             cceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCC----C----hHHHhcCCcceeEECCC
Confidence            45789999985  588999999999943    4567899999999999987654    2    23345555555443   


Q ss_pred             ChHHHHHHHHhcchh
Q 033065           88 HPQSLHQVIVGMDLK  102 (128)
Q Consensus        88 ~~~~l~~~i~~l~~~  102 (128)
                      +++++.++|.+++..
T Consensus       330 ~~~~l~~~i~~~~~~  344 (377)
T cd03798         330 DPEALAEAILRLLAD  344 (377)
T ss_pred             CHHHHHHHHHHHhcC
Confidence            788888888888653

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.65  E-value=0.00025  Score=54.90  Aligned_cols=76  Identities=12%  Similarity=0.120  Sum_probs=56.3

Q ss_pred             ccEEEEeChhhHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChH
Q 033065           18 LAVDCFTFSSSIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---HPQ   90 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~~~   90 (128)
                      .++++.++.+++.++|+.||++|.-+    ...++.|++++|+|+|.-..+.        .++.+.+...++..   +.+
T Consensus       253 ~~v~~~g~~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~--------~~e~i~~~~~G~~~~~~~~~  324 (371)
T cd04962         253 DDVLFLGKQDHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGG--------IPEVVKHGETGFLVDVGDVE  324 (371)
T ss_pred             ceEEEecCcccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCC--------chhhhcCCCceEEcCCCCHH
Confidence            46899999999999999999999543    3469999999999999976541        23344443344443   678


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      ++.+++.+++.
T Consensus       325 ~l~~~i~~l~~  335 (371)
T cd04962         325 AMAEYALSLLE  335 (371)
T ss_pred             HHHHHHHHHHh
Confidence            88888877753

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.62  E-value=0.00018  Score=54.52  Aligned_cols=75  Identities=16%  Similarity=0.268  Sum_probs=54.6

Q ss_pred             ccEEEEeChh--hHHHHHhhccEEEecCc---------hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 033065           18 LAVDCFTFSS--SIADHLSSASLVISHAG---------SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC   86 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~adlvIthaG---------~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~   86 (128)
                      .++++.++.+  ++.++|+.||++|....         .+++.|++++|+|+|..+.+.    .+.    .+...+.++.
T Consensus       275 ~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~----~~~----~~~~~~~g~~  346 (394)
T cd03794         275 DNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGE----SAE----LVEEAGAGLV  346 (394)
T ss_pred             CcEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCC----chh----hhccCCcceE
Confidence            5788999874  68999999999985432         445899999999999998762    222    2222234433


Q ss_pred             e---ChHHHHHHHHhcc
Q 033065           87 A---HPQSLHQVIVGMD  100 (128)
Q Consensus        87 ~---~~~~l~~~i~~l~  100 (128)
                      .   +++++.++|.+++
T Consensus       347 ~~~~~~~~l~~~i~~~~  363 (394)
T cd03794         347 VPPGDPEALAAAILELL  363 (394)
T ss_pred             eCCCCHHHHHHHHHHHH
Confidence            2   7889999998886

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=97.62  E-value=0.00029  Score=53.87  Aligned_cols=77  Identities=17%  Similarity=0.190  Sum_probs=57.1

Q ss_pred             cccEEEEeCh--hhHHHHHhhccEEEe----------cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCE
Q 033065           17 LLAVDCFTFS--SSIADHLSSASLVIS----------HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL   84 (128)
Q Consensus        17 ~~~~~v~~f~--~~~~~~~~~adlvIt----------haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~   84 (128)
                      ..++++.+++  +++..++++||++|.          -+...++.|++++|+|+|..+.+.        ..+.+.+...+
T Consensus       235 ~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~--------~~~~i~~~~~g  306 (355)
T cd03799         235 EDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG--------IPELVEDGETG  306 (355)
T ss_pred             CCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC--------cchhhhCCCce
Confidence            3578899998  579999999999998          344579999999999999876542        11233333355


Q ss_pred             EEe---ChHHHHHHHHhcch
Q 033065           85 YCA---HPQSLHQVIVGMDL  101 (128)
Q Consensus        85 ~~~---~~~~l~~~i~~l~~  101 (128)
                      +..   +.+++.++|.++..
T Consensus       307 ~~~~~~~~~~l~~~i~~~~~  326 (355)
T cd03799         307 LLVPPGDPEALADAIERLLD  326 (355)
T ss_pred             EEeCCCCHHHHHHHHHHHHh
Confidence            443   68889999988764

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.62  E-value=0.00035  Score=53.69  Aligned_cols=76  Identities=13%  Similarity=0.127  Sum_probs=57.2

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-e--Ch
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC-A--HP   89 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~-~--~~   89 (128)
                      ..++.+.++.+++.++++.||++|.-+    -..+++|++++|+|+|.-..+    +.    .+.+.. +.+++ .  ++
T Consensus       248 ~~~v~~~g~~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~----~~----~~~i~~-~~~~~~~~~~~  318 (358)
T cd03812         248 EDKVIFLGVRNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTI----TK----EVDLTD-LVKFLSLDESP  318 (358)
T ss_pred             CCcEEEecccCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCC----ch----hhhhcc-CccEEeCCCCH
Confidence            457889999889999999999999643    357999999999999987654    21    223333 33433 2  56


Q ss_pred             HHHHHHHHhcch
Q 033065           90 QSLHQVIVGMDL  101 (128)
Q Consensus        90 ~~l~~~i~~l~~  101 (128)
                      +++.++|.++++
T Consensus       319 ~~~a~~i~~l~~  330 (358)
T cd03812         319 EIWAEEILKLKS  330 (358)
T ss_pred             HHHHHHHHHHHh
Confidence            999999999975

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.60  E-value=0.00024  Score=53.81  Aligned_cols=77  Identities=17%  Similarity=0.217  Sum_probs=55.8

Q ss_pred             cccEEEEeCh--hhHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeC--
Q 033065           17 LLAVDCFTFS--SSIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAH--   88 (128)
Q Consensus        17 ~~~~~v~~f~--~~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~~--   88 (128)
                      ..++++.+++  +++.++|+.||++|.-+    ...++.|++++|+|+|......        .++.+.+.+.++..+  
T Consensus       258 ~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~--------~~~~i~~~~~g~~~~~~  329 (374)
T cd03817         258 ADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPG--------LPDLVADGENGFLFPPG  329 (374)
T ss_pred             CCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCCCC--------hhhheecCceeEEeCCC
Confidence            3578899998  46999999999999543    3478999999999999876541        334455545555442  


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      .+++.+++.++++
T Consensus       330 ~~~~~~~i~~l~~  342 (374)
T cd03817         330 DEALAEALLRLLQ  342 (374)
T ss_pred             CHHHHHHHHHHHh
Confidence            2278888887764

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.57  E-value=0.00033  Score=53.74  Aligned_cols=77  Identities=18%  Similarity=0.189  Sum_probs=55.2

Q ss_pred             cccEEEEeChh---hHHHHHhhccEEEecCc----hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--
Q 033065           17 LLAVDCFTFSS---SIADHLSSASLVISHAG----SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--   87 (128)
Q Consensus        17 ~~~~~v~~f~~---~~~~~~~~adlvIthaG----~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--   87 (128)
                      ..++.+.+|++   ++.++|+.||++|.-+.    ..++.|++++|+|+|....+..        .+.+.+.+.++..  
T Consensus       243 ~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~--------~e~~~~~~~g~~~~~  314 (365)
T cd03825         243 PFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGI--------PDIVDHGVTGYLAKP  314 (365)
T ss_pred             CCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCC--------hhheeCCCceEEeCC
Confidence            45688888887   58899999999999652    4799999999999998765421        1122233344332  


Q ss_pred             -ChHHHHHHHHhcch
Q 033065           88 -HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 -~~~~l~~~i~~l~~  101 (128)
                       +++++.+++.+++.
T Consensus       315 ~~~~~~~~~l~~l~~  329 (365)
T cd03825         315 GDPEDLAEGIEWLLA  329 (365)
T ss_pred             CCHHHHHHHHHHHHh
Confidence             68888888888764

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.56  E-value=0.00041  Score=52.82  Aligned_cols=76  Identities=22%  Similarity=0.236  Sum_probs=53.8

Q ss_pred             cccEEEEeC-h--hhHHHHHhhccEEEec------CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe
Q 033065           17 LLAVDCFTF-S--SSIADHLSSASLVISH------AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA   87 (128)
Q Consensus        17 ~~~~~v~~f-~--~~~~~~~~~adlvIth------aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~   87 (128)
                      ..++++.+. +  +++..+|+.||++|.-      +-.+++.|++++|+|+|.-+.+.         .+.+...+.+++.
T Consensus       246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~---------~~~i~~~~~g~~~  316 (366)
T cd03822         246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH---------AEEVLDGGTGLLV  316 (366)
T ss_pred             CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC---------hheeeeCCCcEEE
Confidence            357777755 4  4699999999999932      33468999999999999887652         1223334444443


Q ss_pred             ---ChHHHHHHHHhcch
Q 033065           88 ---HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ---~~~~l~~~i~~l~~  101 (128)
                         +.+++.++|.++.+
T Consensus       317 ~~~d~~~~~~~l~~l~~  333 (366)
T cd03822         317 PPGDPAALAEAIRRLLA  333 (366)
T ss_pred             cCCCHHHHHHHHHHHHc
Confidence               68889999888754

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=97.56  E-value=0.00038  Score=54.50  Aligned_cols=76  Identities=13%  Similarity=0.038  Sum_probs=55.1

Q ss_pred             ccEEEEeChhhHHHHHhhccEEEe--c--CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChH
Q 033065           18 LAVDCFTFSSSIADHLSSASLVIS--H--AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---HPQ   90 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adlvIt--h--aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~~~   90 (128)
                      .++.+.++.+++.++|+.||++|.  +  +-..++.||+++|+|+|.-...    +    +.+.+.+...+...   +++
T Consensus       255 ~~v~~~g~~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g----~~e~i~~~~~g~~~~~~d~~  326 (374)
T TIGR03088       255 HLVWLPGERDDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVG----G----NPELVQHGVTGALVPPGDAV  326 (374)
T ss_pred             ceEEEcCCcCCHHHHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCC----C----cHHHhcCCCceEEeCCCCHH
Confidence            356677788899999999999994  2  3346999999999999997654    2    22333333344443   788


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      ++.++|.+++.
T Consensus       327 ~la~~i~~l~~  337 (374)
T TIGR03088       327 ALARALQPYVS  337 (374)
T ss_pred             HHHHHHHHHHh
Confidence            99999988754

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.55  E-value=0.00077  Score=50.29  Aligned_cols=75  Identities=19%  Similarity=0.217  Sum_probs=54.2

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---Ch
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---HP   89 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~~   89 (128)
                      ..++++.++.+++.++++.||++|.-+    ..+++.|++++|+|+|.-..+        ...+.+.+...+++.   +.
T Consensus       245 ~~~v~~~g~~~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~--------~~~e~i~~~~~g~~~~~~~~  316 (353)
T cd03811         245 ADRVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP--------GPREILEDGENGLLVPVGDE  316 (353)
T ss_pred             CccEEEecccCCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC--------ChHHHhcCCCceEEECCCCH
Confidence            357889999999999999999999543    356899999999999987553        234556666666654   45


Q ss_pred             HHHHHHHHhc
Q 033065           90 QSLHQVIVGM   99 (128)
Q Consensus        90 ~~l~~~i~~l   99 (128)
                      +.+.+.+..+
T Consensus       317 ~~~~~~~~~i  326 (353)
T cd03811         317 AALAAAALAL  326 (353)
T ss_pred             HHHHHHHHHH
Confidence            6664334443

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=97.52  E-value=0.00015  Score=57.79  Aligned_cols=76  Identities=16%  Similarity=0.230  Sum_probs=54.6

Q ss_pred             cccEEEEeChhhHHHHHhhccEEE--ec--Cch-HHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eCh
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVI--SH--AGS-GSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC--AHP   89 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvI--th--aG~-~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~--~~~   89 (128)
                      ..++++.++++++..+++.||++|  ++  .|. +.+.|++++|+|+|.-+..    .....     ...|.+++  .++
T Consensus       279 ~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~----~~~i~-----~~~~~g~lv~~~~  349 (397)
T TIGR03087       279 LPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEA----AEGID-----ALPGAELLVAADP  349 (397)
T ss_pred             CCCeEEeeecCCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcc----ccccc-----ccCCcceEeCCCH
Confidence            357899999999999999999998  43  232 3699999999999998653    11110     11233333  488


Q ss_pred             HHHHHHHHhcch
Q 033065           90 QSLHQVIVGMDL  101 (128)
Q Consensus        90 ~~l~~~i~~l~~  101 (128)
                      +++.++|.++++
T Consensus       350 ~~la~ai~~ll~  361 (397)
T TIGR03087       350 ADFAAAILALLA  361 (397)
T ss_pred             HHHHHHHHHHHc
Confidence            999999988754

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.49  E-value=0.00056  Score=53.26  Aligned_cols=77  Identities=14%  Similarity=0.132  Sum_probs=57.6

Q ss_pred             cccEEEEeChh--hHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---
Q 033065           17 LLAVDCFTFSS--SIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---   87 (128)
Q Consensus        17 ~~~~~v~~f~~--~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---   87 (128)
                      ..++.+.+|++  ++..+++.||+++..+    -..++.|++++|+|+|.-+..    +    ..+.+.+.+.+++.   
T Consensus       282 ~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~----~----~~e~i~~~~~g~~~~~~  353 (398)
T cd03800         282 IDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVG----G----PRDIVVDGVTGLLVDPR  353 (398)
T ss_pred             CceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCEEECCCC----C----HHHHccCCCCeEEeCCC
Confidence            35789999975  5889999999999542    236899999999999887653    2    33445555566554   


Q ss_pred             ChHHHHHHHHhcch
Q 033065           88 HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ~~~~l~~~i~~l~~  101 (128)
                      +++++.+.|.++..
T Consensus       354 ~~~~l~~~i~~l~~  367 (398)
T cd03800         354 DPEALAAALRRLLT  367 (398)
T ss_pred             CHHHHHHHHHHHHh
Confidence            68899999988864

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=97.49  E-value=0.0005  Score=56.14  Aligned_cols=76  Identities=7%  Similarity=0.089  Sum_probs=55.7

Q ss_pred             ccEEEEeCh--hhHHHHHhhccEEEecCc----hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh---CCCEEEe-
Q 033065           18 LAVDCFTFS--SSIADHLSSASLVISHAG----SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD---RKHLYCA-   87 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~adlvIthaG----~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~---~g~~~~~-   87 (128)
                      .++++.+|+  +++.++|+.||++|.-+.    ..++.|++++|+|+|......        ..+.+.+   .+.+++. 
T Consensus       312 ~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg--------~~eiv~~~~~~~~G~lv~  383 (465)
T PLN02871        312 TPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASGVPVVAARAGG--------IPDIIPPDQEGKTGFLYT  383 (465)
T ss_pred             CCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcCCCEEEcCCCC--------cHhhhhcCCCCCceEEeC
Confidence            478899998  579999999999996653    357899999999999876531        1223333   3445443 


Q ss_pred             --ChHHHHHHHHhcch
Q 033065           88 --HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 --~~~~l~~~i~~l~~  101 (128)
                        +++++.++|.++++
T Consensus       384 ~~d~~~la~~i~~ll~  399 (465)
T PLN02871        384 PGDVDDCVEKLETLLA  399 (465)
T ss_pred             CCCHHHHHHHHHHHHh
Confidence              78889998888753

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=97.47  E-value=0.00056  Score=54.51  Aligned_cols=78  Identities=14%  Similarity=0.050  Sum_probs=55.9

Q ss_pred             CcccEEEEeChh--hHHHHHhhccEEEecCc-----hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE-E-
Q 033065           16 GLLAVDCFTFSS--SIADHLSSASLVISHAG-----SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLY-C-   86 (128)
Q Consensus        16 ~~~~~~v~~f~~--~~~~~~~~adlvIthaG-----~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~-~-   86 (128)
                      ++.++.+.+|.+  ++.++|+.||++|.-+.     ..++.|++++|+|+|.-....        +.+.+.+...|+ + 
T Consensus       255 l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg--------~~Eiv~~~~~G~~l~  326 (380)
T PRK15484        255 IGDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG--------ITEFVLEGITGYHLA  326 (380)
T ss_pred             cCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCC--------cHhhcccCCceEEEe
Confidence            345788888874  69999999999986432     368899999999999976541        223333333343 2 


Q ss_pred             --eChHHHHHHHHhcch
Q 033065           87 --AHPQSLHQVIVGMDL  101 (128)
Q Consensus        87 --~~~~~l~~~i~~l~~  101 (128)
                        .+++.+.++|.++++
T Consensus       327 ~~~d~~~la~~I~~ll~  343 (380)
T PRK15484        327 EPMTSDSIISDINRTLA  343 (380)
T ss_pred             CCCCHHHHHHHHHHHHc
Confidence              278999999988764

>PLN02275 transferase, transferring glycosyl groups

Probab=97.47  E-value=0.00092  Score=53.05  Aligned_cols=74  Identities=20%  Similarity=0.205  Sum_probs=52.2

Q ss_pred             cEEEEe-Ch--hhHHHHHhhccEEEe----cCc---hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-
Q 033065           19 AVDCFT-FS--SSIADHLSSASLVIS----HAG---SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-   87 (128)
Q Consensus        19 ~~~v~~-f~--~~~~~~~~~adlvIt----haG---~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-   87 (128)
                      ++.+++ |.  +++..+|+.||++|.    ..|   .+++.|++++|+|+|.....    +    +.+.+.+.+.|++. 
T Consensus       287 ~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g----~~eiv~~g~~G~lv~  358 (371)
T PLN02275        287 HVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----C----IGELVKDGKNGLLFS  358 (371)
T ss_pred             ceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCC----C----hHHHccCCCCeEEEC
Confidence            466666 43  679999999999984    212   35899999999999997543    2    34455554455443 


Q ss_pred             ChHHHHHHHHhcc
Q 033065           88 HPQSLHQVIVGMD  100 (128)
Q Consensus        88 ~~~~l~~~i~~l~  100 (128)
                      +++.|.++|.+++
T Consensus       359 ~~~~la~~i~~l~  371 (371)
T PLN02275        359 SSSELADQLLELL  371 (371)
T ss_pred             CHHHHHHHHHHhC
Confidence            7788888887763

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=97.32  E-value=0.00066  Score=53.01  Aligned_cols=78  Identities=18%  Similarity=0.141  Sum_probs=56.6

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---Ch
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---HP   89 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~~   89 (128)
                      ..++++.+|.+++.++|+.||++|.-+    ...++.||+++|+|+|......   +    ..+.+.....|+++   ++
T Consensus       260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g----~~~~v~~~~~G~lv~~~d~  332 (372)
T cd04949         260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---G----PSEIIEDGENGYLVPKGDI  332 (372)
T ss_pred             cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---C----cHHHcccCCCceEeCCCcH
Confidence            346888889999999999999988643    3468999999999999975431   1    12233333344332   78


Q ss_pred             HHHHHHHHhcch
Q 033065           90 QSLHQVIVGMDL  101 (128)
Q Consensus        90 ~~l~~~i~~l~~  101 (128)
                      ++|.++|.+++.
T Consensus       333 ~~la~~i~~ll~  344 (372)
T cd04949         333 EALAEAIIELLN  344 (372)
T ss_pred             HHHHHHHHHHHc
Confidence            899999988864

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.29  E-value=0.00087  Score=52.00  Aligned_cols=78  Identities=17%  Similarity=0.092  Sum_probs=57.0

Q ss_pred             CcccEEEEeChhh--HHHHHhhccEEEec----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--
Q 033065           16 GLLAVDCFTFSSS--IADHLSSASLVISH----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--   87 (128)
Q Consensus        16 ~~~~~~v~~f~~~--~~~~~~~adlvIth----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--   87 (128)
                      ...++++.+|+++  +.++|+.||++|.-    .| .++.|++++|+|+|.......        .+.+.+...+++.  
T Consensus       240 ~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g-~~~~Eama~G~Pvi~~~~~~~--------~e~i~~~~~G~~~~~  310 (351)
T cd03804         240 AGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFG-IVPVEAMASGTPVIAYGKGGA--------LETVIDGVTGILFEE  310 (351)
T ss_pred             cCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCC-chHHHHHHcCCCEEEeCCCCC--------cceeeCCCCEEEeCC
Confidence            3468999999876  89999999998853    24 478999999999999865421        1223333455443  


Q ss_pred             -ChHHHHHHHHhcchh
Q 033065           88 -HPQSLHQVIVGMDLK  102 (128)
Q Consensus        88 -~~~~l~~~i~~l~~~  102 (128)
                       +++.+.++|.++.+.
T Consensus       311 ~~~~~la~~i~~l~~~  326 (351)
T cd03804         311 QTVESLAAAVERFEKN  326 (351)
T ss_pred             CCHHHHHHHHHHHHhC
Confidence             678899999888653

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.23  E-value=0.0022  Score=51.78  Aligned_cols=76  Identities=14%  Similarity=0.194  Sum_probs=54.2

Q ss_pred             cEEEE-eCh--hhHHHHHhhccEEEe----cCc---hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-e
Q 033065           19 AVDCF-TFS--SSIADHLSSASLVIS----HAG---SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC-A   87 (128)
Q Consensus        19 ~~~v~-~f~--~~~~~~~~~adlvIt----haG---~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~-~   87 (128)
                      ++.++ +|+  +++.++|+.||++|+    ..|   ..++.|++++|+|+|....+        ...+.+.+.+.|++ -
T Consensus       295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~--------~~~eiv~~~~~G~lv~  366 (415)
T cd03816         295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK--------CIDELVKHGENGLVFG  366 (415)
T ss_pred             cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCC--------CHHHHhcCCCCEEEEC
Confidence            45555 465  579999999999984    222   45899999999999997543        23344555445544 4


Q ss_pred             ChHHHHHHHHhcchh
Q 033065           88 HPQSLHQVIVGMDLK  102 (128)
Q Consensus        88 ~~~~l~~~i~~l~~~  102 (128)
                      ++++|.++|.+++++
T Consensus       367 d~~~la~~i~~ll~~  381 (415)
T cd03816         367 DSEELAEQLIDLLSN  381 (415)
T ss_pred             CHHHHHHHHHHHHhc
Confidence            889999999888654

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=97.16  E-value=0.0024  Score=50.18  Aligned_cols=78  Identities=8%  Similarity=0.036  Sum_probs=54.5

Q ss_pred             cccEEEEeChhh----HHHHHhhccEEEecCc----hHHHHHHHHhCCCEEEEe-CCCCCCchHHHHHHHHHhCCCEEE-
Q 033065           17 LLAVDCFTFSSS----IADHLSSASLVISHAG----SGSIFETLRLGKPLIVVV-NEDLMDNHQSELAEELADRKHLYC-   86 (128)
Q Consensus        17 ~~~~~v~~f~~~----~~~~~~~adlvIthaG----~~Ti~E~l~~g~P~I~vP-~~~~~~~~Q~~nA~~l~~~g~~~~-   86 (128)
                      ..++++.+|.++    +.++++.||++|.-+-    ..++.||+++|+|+|..- ..    +    ..+.+.+...|+. 
T Consensus       235 ~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~----g----~~eiv~~~~~G~lv  306 (359)
T PRK09922        235 EQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMS----G----PRDIIKPGLNGELY  306 (359)
T ss_pred             CCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCC----C----hHHHccCCCceEEE
Confidence            457999999754    6667778999996432    579999999999999874 32    1    1123333333433 


Q ss_pred             --eChHHHHHHHHhcchh
Q 033065           87 --AHPQSLHQVIVGMDLK  102 (128)
Q Consensus        87 --~~~~~l~~~i~~l~~~  102 (128)
                        .+++++.++|.+++.+
T Consensus       307 ~~~d~~~la~~i~~l~~~  324 (359)
T PRK09922        307 TPGNIDEFVGKLNKVISG  324 (359)
T ss_pred             CCCCHHHHHHHHHHHHhC
Confidence              3789999999998654

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=97.13  E-value=0.0031  Score=50.86  Aligned_cols=76  Identities=17%  Similarity=0.313  Sum_probs=55.2

Q ss_pred             ccEEEEeChh--hHHHHHhhccEEEecC---------c-hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE
Q 033065           18 LAVDCFTFSS--SIADHLSSASLVISHA---------G-SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLY   85 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~adlvItha---------G-~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~   85 (128)
                      .++++.+|.+  ++.++|+.||++|.-+         | ..+++|++++|+|+|.-....        ..+.+.+...++
T Consensus       279 ~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g--------~~E~v~~~~~G~  350 (406)
T PRK15427        279 DVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG--------IPELVEADKSGW  350 (406)
T ss_pred             CeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC--------chhhhcCCCceE
Confidence            4688999984  6899999999988532         2 367999999999999876541        223333333454


Q ss_pred             Ee---ChHHHHHHHHhcch
Q 033065           86 CA---HPQSLHQVIVGMDL  101 (128)
Q Consensus        86 ~~---~~~~l~~~i~~l~~  101 (128)
                      +.   +++.|.++|.++.+
T Consensus       351 lv~~~d~~~la~ai~~l~~  369 (406)
T PRK15427        351 LVPENDAQALAQRLAAFSQ  369 (406)
T ss_pred             EeCCCCHHHHHHHHHHHHh
Confidence            43   78899999988864

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=97.13  E-value=0.0023  Score=50.65  Aligned_cols=76  Identities=13%  Similarity=0.091  Sum_probs=54.6

Q ss_pred             ccEEEEeCh--hhHHHHHhhccEEEec----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C
Q 033065           18 LAVDCFTFS--SSIADHLSSASLVISH----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---H   88 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~adlvIth----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~   88 (128)
                      .++++.+++  +++.++|+.||++|.-    +...++.|++++|+|+|....+.        ..+.+.+...++..   +
T Consensus       283 ~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~--------~~e~i~~~~~g~~~~~~d  354 (405)
T TIGR03449       283 DRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGG--------LPVAVADGETGLLVDGHD  354 (405)
T ss_pred             ceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCC--------cHhhhccCCceEECCCCC
Confidence            468888887  4689999999998842    22358999999999999986542        12233343445443   7


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      ++++.++|.++++
T Consensus       355 ~~~la~~i~~~l~  367 (405)
T TIGR03449       355 PADWADALARLLD  367 (405)
T ss_pred             HHHHHHHHHHHHh
Confidence            8888888888754

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.12  E-value=0.0019  Score=51.31  Aligned_cols=76  Identities=13%  Similarity=0.098  Sum_probs=54.4

Q ss_pred             ccEEEEeChh--hHHHHHhhccEEEecC--c--hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C
Q 033065           18 LAVDCFTFSS--SIADHLSSASLVISHA--G--SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---H   88 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~adlvItha--G--~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~   88 (128)
                      .++++.++++  ++.++|+.||++|.-+  .  ..++.|++++|+|+|.-..+.        ..+.+.....++..   +
T Consensus       281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g--------~~e~i~~~~~G~lv~~~d  352 (396)
T cd03818         281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAP--------VREVITDGENGLLVDFFD  352 (396)
T ss_pred             ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCC--------chhhcccCCceEEcCCCC
Confidence            4788999984  6889999999988422  1  248999999999999875531        23333333344443   7


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      ++.|.++|.++++
T Consensus       353 ~~~la~~i~~ll~  365 (396)
T cd03818         353 PDALAAAVIELLD  365 (396)
T ss_pred             HHHHHHHHHHHHh
Confidence            8999999988864

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.94  E-value=0.0032  Score=50.16  Aligned_cols=76  Identities=13%  Similarity=0.105  Sum_probs=53.3

Q ss_pred             ccEEEEeCh--hhHHHHHhhccEEEecC---c-hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChH
Q 033065           18 LAVDCFTFS--SSIADHLSSASLVISHA---G-SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC-AHPQ   90 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~adlvItha---G-~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~-~~~~   90 (128)
                      .++++.+++  +++..+++.||++|.-+   | ..++.||+++|+|+|+-+....        .+.+.+.+..+. .+.+
T Consensus       250 ~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~--------~e~i~~~~~~~~~~~~~  321 (398)
T cd03796         250 DRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGI--------PEVLPPDMILLAEPDVE  321 (398)
T ss_pred             CeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEECCCCCc--------hhheeCCceeecCCCHH
Confidence            468888986  46999999999998643   1 2499999999999998776521        122222222222 2778


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      ++.+++.+++.
T Consensus       322 ~l~~~l~~~l~  332 (398)
T cd03796         322 SIVRKLEEAIS  332 (398)
T ss_pred             HHHHHHHHHHh
Confidence            88888887764

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=96.91  E-value=0.003  Score=44.74  Aligned_cols=49  Identities=18%  Similarity=0.097  Sum_probs=40.5

Q ss_pred             cccEEEEeCh---hhHHHHHhhccEEEecCc----hHHHHHHHHhCCCEEEEeCCC
Q 033065           17 LLAVDCFTFS---SSIADHLSSASLVISHAG----SGSIFETLRLGKPLIVVVNED   65 (128)
Q Consensus        17 ~~~~~v~~f~---~~~~~~~~~adlvIthaG----~~Ti~E~l~~g~P~I~vP~~~   65 (128)
                      ..++++.++.   +++..+++.||++|+-..    .+++.|++++|+|+|.-+.+.
T Consensus       160 ~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~  215 (229)
T cd01635         160 LDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGG  215 (229)
T ss_pred             cccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence            4578888884   556677777999999885    689999999999999988763

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=96.90  E-value=0.0047  Score=49.18  Aligned_cols=93  Identities=19%  Similarity=0.253  Sum_probs=57.0

Q ss_pred             cEEEEeCh--hhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChHHHHH
Q 033065           19 AVDCFTFS--SSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC--AHPQSLHQ   94 (128)
Q Consensus        19 ~~~v~~f~--~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~--~~~~~l~~   94 (128)
                      ++++++-.  .++-.+|+.|++|||-+| |-..|+.++|+|+|.+-..   ..-|.     ....|..+.  .+++++.+
T Consensus       240 ~v~~~~~l~~~~~l~ll~~a~~vvgdSs-GI~eEa~~lg~P~v~iR~~---geRqe-----~r~~~~nvlv~~~~~~I~~  310 (346)
T PF02350_consen  240 NVRLIEPLGYEEYLSLLKNADLVVGDSS-GIQEEAPSLGKPVVNIRDS---GERQE-----GRERGSNVLVGTDPEAIIQ  310 (346)
T ss_dssp             TEEEE----HHHHHHHHHHESEEEESSH-HHHHHGGGGT--EEECSSS----S-HH-----HHHTTSEEEETSSHHHHHH
T ss_pred             CEEEECCCCHHHHHHHHhcceEEEEcCc-cHHHHHHHhCCeEEEecCC---CCCHH-----HHhhcceEEeCCCHHHHHH
Confidence            66666554  357899999999999999 5444999999999999221   11222     123444433  38899999


Q ss_pred             HHHhcchh---------cCCCCC-CCChHHHHHHHH
Q 033065           95 VIVGMDLK---------SLLPYQ-PGDATPVAKLIN  120 (128)
Q Consensus        95 ~i~~l~~~---------~~~~~~-~~~~~~i~~~i~  120 (128)
                      ++.+++..         ...+|- .+++++|+++|+
T Consensus       311 ai~~~l~~~~~~~~~~~~~npYgdG~as~rI~~~Lk  346 (346)
T PF02350_consen  311 AIEKALSDKDFYRKLKNRPNPYGDGNASERIVEILK  346 (346)
T ss_dssp             HHHHHHH-HHHHHHHHCS--TT-SS-HHHHHHHHHH
T ss_pred             HHHHHHhChHHHHhhccCCCCCCCCcHHHHHHHhhC
Confidence            99888742         133554 346778887764

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.79  E-value=0.008  Score=47.07  Aligned_cols=77  Identities=18%  Similarity=0.143  Sum_probs=54.1

Q ss_pred             cccEEEEeChhh--HHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eC
Q 033065           17 LLAVDCFTFSSS--IADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC--AH   88 (128)
Q Consensus        17 ~~~~~v~~f~~~--~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~--~~   88 (128)
                      ..++++.+++++  +..+|..||+++..+    -..++.|++++|+|+|..-.+    +..    +.+.+.+.+++  .+
T Consensus       279 ~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~----~~~----e~i~~~~~g~~~~~~  350 (392)
T cd03805         279 EDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSG----GPL----ETVVDGETGFLCEPT  350 (392)
T ss_pred             CceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCC----CcH----HHhccCCceEEeCCC
Confidence            347899999864  678999999998532    135889999999999998543    211    22333334443  37


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      ++++.+.|.++.+
T Consensus       351 ~~~~a~~i~~l~~  363 (392)
T cd03805         351 PEEFAEAMLKLAN  363 (392)
T ss_pred             HHHHHHHHHHHHh
Confidence            8888888888764

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=96.77  E-value=0.0096  Score=46.54  Aligned_cols=67  Identities=15%  Similarity=0.220  Sum_probs=47.4

Q ss_pred             hhHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---Ch------HHHH
Q 033065           27 SSIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---HP------QSLH   93 (128)
Q Consensus        27 ~~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~~------~~l~   93 (128)
                      +++.++|+.||++|.-+    ...++.|++++|+|+|.-..+    +    ..+.+.....++..   ++      +.+.
T Consensus       272 ~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~----~~e~i~~~~~G~~~~~~~~~~~~~~~~l~  343 (388)
T TIGR02149       272 EELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATG----G----IPEVVVDGETGFLVPPDNSDADGFQAELA  343 (388)
T ss_pred             HHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCC----C----HHHHhhCCCceEEcCCCCCcccchHHHHH
Confidence            46999999999998643    235789999999999987654    1    23344444445543   44      7888


Q ss_pred             HHHHhcch
Q 033065           94 QVIVGMDL  101 (128)
Q Consensus        94 ~~i~~l~~  101 (128)
                      ++|.+++.
T Consensus       344 ~~i~~l~~  351 (388)
T TIGR02149       344 KAINILLA  351 (388)
T ss_pred             HHHHHHHh
Confidence            88887753

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.76  E-value=0.0012  Score=50.33  Aligned_cols=76  Identities=16%  Similarity=0.162  Sum_probs=52.9

Q ss_pred             cccEEEEeCh--hhHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eCh
Q 033065           17 LLAVDCFTFS--SSIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC-AHP   89 (128)
Q Consensus        17 ~~~~~v~~f~--~~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~-~~~   89 (128)
                      ..++++.+++  +++.++++.||++|.-+    ...++.|++++|+|+|.-..+..  .+      .+.+.|..+. .+.
T Consensus       252 ~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~--~e------~~~~~~~~~~~~~~  323 (365)
T cd03809         252 GDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSL--PE------VAGDAALYFDPLDP  323 (365)
T ss_pred             CCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCCc--cc------eecCceeeeCCCCH
Confidence            4578899998  56889999999887542    24579999999999998655421  11      1222333222 268


Q ss_pred             HHHHHHHHhcc
Q 033065           90 QSLHQVIVGMD  100 (128)
Q Consensus        90 ~~l~~~i~~l~  100 (128)
                      +++.++|.++.
T Consensus       324 ~~~~~~i~~l~  334 (365)
T cd03809         324 EALAAAIERLL  334 (365)
T ss_pred             HHHHHHHHHHh
Confidence            88999988864

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>PHA01633 putative glycosyl transferase group 1

Probab=96.75  E-value=0.0066  Score=48.36  Aligned_cols=84  Identities=13%  Similarity=0.155  Sum_probs=55.0

Q ss_pred             ccEEEEe---C--hhhHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCC---CCCCch-----HHHHHHHHH-
Q 033065           18 LAVDCFT---F--SSSIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNE---DLMDNH-----QSELAEELA-   79 (128)
Q Consensus        18 ~~~~v~~---f--~~~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~---~~~~~~-----Q~~nA~~l~-   79 (128)
                      .++++.+   +  .+++.++++.||++|.-+    =..++.||+++|+|+|.--.+   +..++.     +..++..+. 
T Consensus       201 ~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~  280 (335)
T PHA01633        201 ANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYD  280 (335)
T ss_pred             CcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcC
Confidence            4677764   3  256999999999999632    236899999999998886332   211110     122333333 


Q ss_pred             -hCCCEEE---eChHHHHHHHHhcch
Q 033065           80 -DRKHLYC---AHPQSLHQVIVGMDL  101 (128)
Q Consensus        80 -~~g~~~~---~~~~~l~~~i~~l~~  101 (128)
                       ..|.++.   .+++++.++|.++..
T Consensus       281 ~~~g~g~~~~~~d~~~la~ai~~~~~  306 (335)
T PHA01633        281 KEHGQKWKIHKFQIEDMANAIILAFE  306 (335)
T ss_pred             cccCceeeecCCCHHHHHHHHHHHHh
Confidence             2456554   389999999988754

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=96.75  E-value=0.0081  Score=47.20  Aligned_cols=76  Identities=13%  Similarity=0.147  Sum_probs=53.0

Q ss_pred             ccEEEEeCh----hhHHHHHhhccEEEecCc----hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eC
Q 033065           18 LAVDCFTFS----SSIADHLSSASLVISHAG----SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC-AH   88 (128)
Q Consensus        18 ~~~~v~~f~----~~~~~~~~~adlvIthaG----~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~-~~   88 (128)
                      .++.++++.    .++..+++.||+++.-+-    ..++.|++++|+|+|.-....        ..+.+.+...++. -+
T Consensus       252 ~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~--------~~~~i~~~~~g~~~~~  323 (372)
T cd03792         252 PDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGG--------IPLQIEDGETGFLVDT  323 (372)
T ss_pred             CCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCC--------chhhcccCCceEEeCC
Confidence            467787776    468899999999997552    359999999999999876542        1223333344444 36


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      ++.+..+|.+++.
T Consensus       324 ~~~~a~~i~~ll~  336 (372)
T cd03792         324 VEEAAVRILYLLR  336 (372)
T ss_pred             cHHHHHHHHHHHc
Confidence            7777777777653

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.74  E-value=0.0083  Score=45.57  Aligned_cols=76  Identities=14%  Similarity=0.166  Sum_probs=53.6

Q ss_pred             cccEEEEeChhh--HHHHHhhccEEEecC----c-hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-C
Q 033065           17 LLAVDCFTFSSS--IADHLSSASLVISHA----G-SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-H   88 (128)
Q Consensus        17 ~~~~~v~~f~~~--~~~~~~~adlvItha----G-~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-~   88 (128)
                      ..++++.+|+++  +.++|+.||+++.-+    | ..++.|++++|+|+|.-..+..        .+.+.+...++.. .
T Consensus       223 ~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~--------~e~i~~~~~g~l~~~  294 (335)
T cd03802         223 GPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAV--------PEVVEDGVTGFLVDS  294 (335)
T ss_pred             CCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCc--------hhheeCCCcEEEeCC
Confidence            468999999864  678999999988422    2 3589999999999998876521        1222232244443 5


Q ss_pred             hHHHHHHHHhcc
Q 033065           89 PQSLHQVIVGMD  100 (128)
Q Consensus        89 ~~~l~~~i~~l~  100 (128)
                      ++++.++|.++.
T Consensus       295 ~~~l~~~l~~l~  306 (335)
T cd03802         295 VEELAAAVARAD  306 (335)
T ss_pred             HHHHHHHHHHHh
Confidence            888888888774

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.61  E-value=0.012  Score=47.36  Aligned_cols=76  Identities=14%  Similarity=0.146  Sum_probs=53.4

Q ss_pred             ccEEEEeChh--hHHHHHhh--ccEEEecCc----hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--
Q 033065           18 LAVDCFTFSS--SIADHLSS--ASLVISHAG----SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--   87 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~--adlvIthaG----~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--   87 (128)
                      .++++.+|++  ++.++++.  ||++|..+-    ..+++||+++|+|+|.-...    +    ..+.+.+..-|+..  
T Consensus       289 ~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vg----g----~~e~i~~~~~G~l~~~  360 (407)
T cd04946         289 ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVG----G----TPEIVDNGGNGLLLSK  360 (407)
T ss_pred             ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCC----C----cHHHhcCCCcEEEeCC
Confidence            4688999986  47788876  677765442    46899999999999986543    2    23444444345432  


Q ss_pred             --ChHHHHHHHHhcch
Q 033065           88 --HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 --~~~~l~~~i~~l~~  101 (128)
                        +++++.++|.++.+
T Consensus       361 ~~~~~~la~~I~~ll~  376 (407)
T cd04946         361 DPTPNELVSSLSKFID  376 (407)
T ss_pred             CCCHHHHHHHHHHHHh
Confidence              57889999998864

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=96.58  E-value=0.0065  Score=48.19  Aligned_cols=73  Identities=19%  Similarity=0.208  Sum_probs=52.5

Q ss_pred             cccEEEEeCh--hhHHHHHhhccEEEec--------Cc-hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC-CCE
Q 033065           17 LLAVDCFTFS--SSIADHLSSASLVISH--------AG-SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR-KHL   84 (128)
Q Consensus        17 ~~~~~v~~f~--~~~~~~~~~adlvIth--------aG-~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~-g~~   84 (128)
                      ..|+++.++.  +++..+++.||+.|.-        ++ ...+.|++++|+|+|..+.++.           .... +..
T Consensus       253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~-----------~~~~~~~~  321 (373)
T cd04950         253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV-----------RRYEDEVV  321 (373)
T ss_pred             CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH-----------HhhcCcEE
Confidence            3689999998  5799999999998742        22 2469999999999998765311           1111 233


Q ss_pred             EEe-ChHHHHHHHHhcc
Q 033065           85 YCA-HPQSLHQVIVGMD  100 (128)
Q Consensus        85 ~~~-~~~~l~~~i~~l~  100 (128)
                      +.. +++++.++|.+++
T Consensus       322 ~~~~d~~~~~~ai~~~l  338 (373)
T cd04950         322 LIADDPEEFVAAIEKAL  338 (373)
T ss_pred             EeCCCHHHHHHHHHHHH
Confidence            332 7999999999864

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.55  E-value=0.012  Score=47.54  Aligned_cols=78  Identities=18%  Similarity=0.276  Sum_probs=58.5

Q ss_pred             EEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCE-EE------------
Q 033065           20 VDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL-YC------------   86 (128)
Q Consensus        20 ~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~-~~------------   86 (128)
                      +.+.-...+-.++|+.||++++.+|. .+.|++.+|+|+|++=..   +.=....|+++.+..+. +.            
T Consensus       245 ~~~~~~~~~~~~~m~~ad~al~~SGT-aTLE~Al~g~P~Vv~Yk~---~~lt~~iak~lvk~~~isL~Niia~~~v~PEl  320 (373)
T PF02684_consen  245 VSIVIIEGESYDAMAAADAALAASGT-ATLEAALLGVPMVVAYKV---SPLTYFIAKRLVKVKYISLPNIIAGREVVPEL  320 (373)
T ss_pred             CeEEEcCCchHHHHHhCcchhhcCCH-HHHHHHHhCCCEEEEEcC---cHHHHHHHHHhhcCCEeechhhhcCCCcchhh
Confidence            34444444567899999999999995 788999999999999654   34567899999887653 21            


Q ss_pred             ----eChHHHHHHHHhcch
Q 033065           87 ----AHPQSLHQVIVGMDL  101 (128)
Q Consensus        87 ----~~~~~l~~~i~~l~~  101 (128)
                          .+++.+.+.+.+++.
T Consensus       321 iQ~~~~~~~i~~~~~~ll~  339 (373)
T PF02684_consen  321 IQEDATPENIAAELLELLE  339 (373)
T ss_pred             hcccCCHHHHHHHHHHHhc
Confidence                167777777777654

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=96.44  E-value=0.015  Score=47.28  Aligned_cols=76  Identities=9%  Similarity=0.108  Sum_probs=52.8

Q ss_pred             ccEEEEeCh--hhHHHHHhhc----cEEEecC---c-hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe
Q 033065           18 LAVDCFTFS--SSIADHLSSA----SLVISHA---G-SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA   87 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~a----dlvItha---G-~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~   87 (128)
                      .++++.++.  +++.++|+.|    |++|.-+   | ..++.||+++|+|+|.-...    +    ..+.+.+...+++.
T Consensus       317 ~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g----~~eiv~~~~~G~lv  388 (439)
T TIGR02472       317 GKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDG----G----PRDIIANCRNGLLV  388 (439)
T ss_pred             ceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCC----C----cHHHhcCCCcEEEe
Confidence            356666653  5688999987    8988643   2 35999999999999988664    1    22333333344443


Q ss_pred             ---ChHHHHHHHHhcch
Q 033065           88 ---HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ---~~~~l~~~i~~l~~  101 (128)
                         +++.|.++|.++++
T Consensus       389 ~~~d~~~la~~i~~ll~  405 (439)
T TIGR02472       389 DVLDLEAIASALEDALS  405 (439)
T ss_pred             CCCCHHHHHHHHHHHHh
Confidence               78999999988754

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>PRK10307 putative glycosyl transferase; Provisional

Probab=96.39  E-value=0.017  Score=46.06  Aligned_cols=77  Identities=14%  Similarity=0.190  Sum_probs=52.1

Q ss_pred             cEEEEeChh--hHHHHHhhccEEEe--cCc------hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-e
Q 033065           19 AVDCFTFSS--SIADHLSSASLVIS--HAG------SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC-A   87 (128)
Q Consensus        19 ~~~v~~f~~--~~~~~~~~adlvIt--haG------~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~-~   87 (128)
                      ++++.+|.+  ++.++++.||+.|.  +.+      .+.+.|++++|+|+|....+.   .   ...+.+...|..+- -
T Consensus       285 ~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g---~---~~~~~i~~~G~~~~~~  358 (412)
T PRK10307        285 NVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPG---T---ELGQLVEGIGVCVEPE  358 (412)
T ss_pred             ceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCC---c---hHHHHHhCCcEEeCCC
Confidence            688899874  68999999997553  332      235789999999999987641   1   11222223333322 2


Q ss_pred             ChHHHHHHHHhcch
Q 033065           88 HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ~~~~l~~~i~~l~~  101 (128)
                      ++++|.++|.++.+
T Consensus       359 d~~~la~~i~~l~~  372 (412)
T PRK10307        359 SVEALVAAIAALAR  372 (412)
T ss_pred             CHHHHHHHHHHHHh
Confidence            78899999988753

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.36  E-value=0.013  Score=48.06  Aligned_cols=75  Identities=15%  Similarity=0.158  Sum_probs=53.1

Q ss_pred             ccEEEEeChhhHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC-----C-CEEE-
Q 033065           18 LAVDCFTFSSSIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR-----K-HLYC-   86 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~-----g-~~~~-   86 (128)
                      .++++.+ ..++.++|+.||++|.-+    -..++.|++++|+|+|.-...    +    ..+.+.+.     | .+++ 
T Consensus       354 ~~V~f~G-~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g----~----~~elv~~~~~~~~g~~G~lv  424 (475)
T cd03813         354 DNVKFTG-FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVG----S----CRELIEGADDEALGPAGEVV  424 (475)
T ss_pred             CeEEEcC-CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCC----C----hHHHhcCCcccccCCceEEE
Confidence            4788888 567999999999998553    346899999999999985432    1    22333331     1 3433 


Q ss_pred             --eChHHHHHHHHhcch
Q 033065           87 --AHPQSLHQVIVGMDL  101 (128)
Q Consensus        87 --~~~~~l~~~i~~l~~  101 (128)
                        .+++++.++|.++++
T Consensus       425 ~~~d~~~la~ai~~ll~  441 (475)
T cd03813         425 PPADPEALARAILRLLK  441 (475)
T ss_pred             CCCCHHHHHHHHHHHhc
Confidence              278999999988864

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.26  E-value=0.011  Score=45.29  Aligned_cols=76  Identities=18%  Similarity=0.164  Sum_probs=50.7

Q ss_pred             cccEEEEeChh--hHHHHHhhccEEEecCch-----HHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeCh
Q 033065           17 LLAVDCFTFSS--SIADHLSSASLVISHAGS-----GSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHP   89 (128)
Q Consensus        17 ~~~~~v~~f~~--~~~~~~~~adlvIthaG~-----~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~~~   89 (128)
                      ..++++.++++  ++.+++.+||+++.++-.     .++.|++++|+|+|....+..  .      +.+...|.. +...
T Consensus       247 ~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~--~------e~~~~~g~~-~~~~  317 (363)
T cd04955         247 DPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN--R------EVLGDKAIY-FKVG  317 (363)
T ss_pred             CCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCcc--c------eeecCCeeE-ecCc
Confidence            35789999985  477899999999876543     579999999999998865421  1      112222222 2222


Q ss_pred             HHHHHHHHhcch
Q 033065           90 QSLHQVIVGMDL  101 (128)
Q Consensus        90 ~~l~~~i~~l~~  101 (128)
                      +.+.+++.++.+
T Consensus       318 ~~l~~~i~~l~~  329 (363)
T cd04955         318 DDLASLLEELEA  329 (363)
T ss_pred             hHHHHHHHHHHh
Confidence            338888877754

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=96.25  E-value=0.026  Score=45.73  Aligned_cols=89  Identities=15%  Similarity=0.282  Sum_probs=65.1

Q ss_pred             hHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChHHHHHHHHhcch----
Q 033065           28 SIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--HPQSLHQVIVGMDL----  101 (128)
Q Consensus        28 ~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--~~~~l~~~i~~l~~----  101 (128)
                      ++..+|..|-+++|-+| |-.-||..+|+|++++-..    .++.+    -.+.|..+..  +.+.+.+.+.++++    
T Consensus       274 ~f~~L~~~a~~iltDSG-giqEEAp~lg~Pvl~lR~~----TERPE----~v~agt~~lvg~~~~~i~~~~~~ll~~~~~  344 (383)
T COG0381         274 DFHNLMKNAFLILTDSG-GIQEEAPSLGKPVLVLRDT----TERPE----GVEAGTNILVGTDEENILDAATELLEDEEF  344 (383)
T ss_pred             HHHHHHHhceEEEecCC-chhhhHHhcCCcEEeeccC----CCCcc----ceecCceEEeCccHHHHHHHHHHHhhChHH
Confidence            47899999999999999 5789999999999999543    12222    2334555443  67888888888764    


Q ss_pred             -----hcCCCCCC-CChHHHHHHHHHhcCC
Q 033065          102 -----KSLLPYQP-GDATPVAKLINRFLGF  125 (128)
Q Consensus       102 -----~~~~~~~~-~~~~~i~~~i~~~~g~  125 (128)
                           +..++|-. .++++|+++|.+..++
T Consensus       345 ~~~m~~~~npYgdg~as~rIv~~l~~~~~~  374 (383)
T COG0381         345 YERMSNAKNPYGDGNASERIVEILLNYFDS  374 (383)
T ss_pred             HHHHhcccCCCcCcchHHHHHHHHHHHhhh
Confidence                 23345543 3788999999988764

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=96.16  E-value=0.063  Score=42.35  Aligned_cols=85  Identities=20%  Similarity=0.268  Sum_probs=56.3

Q ss_pred             HHHHHhhccEEEe-cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChH-HHHHHHHhcchhcCCC
Q 033065           29 IADHLSSASLVIS-HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQ-SLHQVIVGMDLKSLLP  106 (128)
Q Consensus        29 ~~~~~~~adlvIt-haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~~~~-~l~~~i~~l~~~~~~~  106 (128)
                      +..+|+.||.||. -=-.+.++||++.|+|+.++|.+. ..+-=....+.|.+.|+....+.. .+.         ...+
T Consensus       222 y~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L~~~g~~r~~~~~~~~~---------~~~~  291 (311)
T PF06258_consen  222 YLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSLEERGAVRPFTGWRDLE---------QWTP  291 (311)
T ss_pred             HHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHHHHCCCEEECCCccccc---------cccc
Confidence            6789999995555 445667899999999999999875 222223467777888887654321 111         1222


Q ss_pred             CCC-CChHHHHHHHHHhc
Q 033065          107 YQP-GDATPVAKLINRFL  123 (128)
Q Consensus       107 ~~~-~~~~~i~~~i~~~~  123 (128)
                      +.+ +.++.+++.|.+.+
T Consensus       292 ~~pl~et~r~A~~i~~r~  309 (311)
T PF06258_consen  292 YEPLDETDRVAAEIRERL  309 (311)
T ss_pred             CCCccHHHHHHHHHHHHh
Confidence            333 56788888887754

The function of this family is unknown.

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=96.15  E-value=0.026  Score=44.21  Aligned_cols=77  Identities=13%  Similarity=0.159  Sum_probs=53.6

Q ss_pred             cccEEEEeChh--hHHHHHhhccEEEec-C-------------chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh
Q 033065           17 LLAVDCFTFSS--SIADHLSSASLVISH-A-------------GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD   80 (128)
Q Consensus        17 ~~~~~v~~f~~--~~~~~~~~adlvIth-a-------------G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~   80 (128)
                      ..++++.+|++  ++..+|+..-.+|.- .             =.+-+.+.+++|+|+|+-+.        ...++.+++
T Consensus       206 ~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~--------~~~~~~V~~  277 (333)
T PRK09814        206 SANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSK--------AAIADFIVE  277 (333)
T ss_pred             CCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCC--------ccHHHHHHh
Confidence            35789998985  477777773223322 1             12347889999999998543        357788888


Q ss_pred             CCCEEEe-ChHHHHHHHHhcch
Q 033065           81 RKHLYCA-HPQSLHQVIVGMDL  101 (128)
Q Consensus        81 ~g~~~~~-~~~~l~~~i~~l~~  101 (128)
                      .+.|+++ +.+++.+.+.++.+
T Consensus       278 ~~~G~~v~~~~el~~~l~~~~~  299 (333)
T PRK09814        278 NGLGFVVDSLEELPEIIDNITE  299 (333)
T ss_pred             CCceEEeCCHHHHHHHHHhcCH
Confidence            9999876 56788888887653

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=96.15  E-value=0.033  Score=47.36  Aligned_cols=48  Identities=17%  Similarity=0.162  Sum_probs=40.6

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEec----CchHHHHHHHHhCCCEEEEeCC
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISH----AGSGSIFETLRLGKPLIVVVNE   64 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIth----aG~~Ti~E~l~~g~P~I~vP~~   64 (128)
                      ..++++.+|.+++..+|+.||++|.-    +-..++.|++++|+|+|.-...
T Consensus       454 ~d~V~FlG~~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvG  505 (578)
T PRK15490        454 LERILFVGASRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAG  505 (578)
T ss_pred             CCcEEECCChhhHHHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCC
Confidence            35799999999999999999999863    2246999999999999987653

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=96.09  E-value=0.023  Score=47.40  Aligned_cols=75  Identities=15%  Similarity=0.034  Sum_probs=51.4

Q ss_pred             ccEEEEeChhhHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeC-----
Q 033065           18 LAVDCFTFSSSIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAH-----   88 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~~-----   88 (128)
                      .++++.++. ++.++++.||++|.-+    -..++.||+++|+|+|.......       ..+.+..-.-|+.+.     
T Consensus       376 ~~V~f~G~~-~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G-------~~eiI~~g~nG~lv~~~~~~  447 (500)
T TIGR02918       376 DYIHLKGHR-NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYG-------NPTFIEDNKNGYLIPIDEEE  447 (500)
T ss_pred             CeEEEcCCC-CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCC-------CHHHccCCCCEEEEeCCccc
Confidence            467888886 5899999999999644    34699999999999999765311       122222222333322     


Q ss_pred             ------hHHHHHHHHhcc
Q 033065           89 ------PQSLHQVIVGMD  100 (128)
Q Consensus        89 ------~~~l~~~i~~l~  100 (128)
                            ++.|+++|.+++
T Consensus       448 ~d~~~~~~~la~~I~~ll  465 (500)
T TIGR02918       448 DDEDQIITALAEKIVEYF  465 (500)
T ss_pred             cchhHHHHHHHHHHHHHh
Confidence                  677888887775

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=96.07  E-value=0.049  Score=44.61  Aligned_cols=79  Identities=15%  Similarity=0.070  Sum_probs=63.5

Q ss_pred             ccEEEEeChhhHHHHHhhccEEE------ecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-ChH
Q 033065           18 LAVDCFTFSSSIADHLSSASLVI------SHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-HPQ   90 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adlvI------thaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-~~~   90 (128)
                      -++-+.+-.-+|..+++-||+.+      -+||.| ..|.+++|+|+|+=|+.    ..|.+.++.+.+.|+++.+ +.+
T Consensus       300 tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~----~Nf~ei~~~l~~~ga~~~v~~~~  374 (419)
T COG1519         300 TDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYT----FNFSDIAERLLQAGAGLQVEDAD  374 (419)
T ss_pred             CcEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCcc----ccHHHHHHHHHhcCCeEEECCHH
Confidence            36677777778999999999764      377875 89999999999999987    4599999999999999876 555


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      .|...+..++.
T Consensus       375 ~l~~~v~~l~~  385 (419)
T COG1519         375 LLAKAVELLLA  385 (419)
T ss_pred             HHHHHHHHhcC
Confidence            66666665543

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=95.97  E-value=0.041  Score=47.83  Aligned_cols=76  Identities=9%  Similarity=0.112  Sum_probs=53.3

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEec---Cc-hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C-
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISH---AG-SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---H-   88 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIth---aG-~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~-   88 (128)
                      ..++++.+|.+++..+|+.||++|.-   -| .+++.|++++|+|+|.-...    +    ..+.+.+...++.+   + 
T Consensus       573 ~~~V~flG~~~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G----~~EiV~dg~~GlLv~~~d~  644 (694)
T PRK15179        573 GERILFTGLSRRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----G----AGEAVQEGVTGLTLPADTV  644 (694)
T ss_pred             CCcEEEcCCcchHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCC----C----hHHHccCCCCEEEeCCCCC
Confidence            35789999999999999999998862   22 57899999999999997653    1    22334333345443   2 


Q ss_pred             -hHHHHHHHHhcc
Q 033065           89 -PQSLHQVIVGMD  100 (128)
Q Consensus        89 -~~~l~~~i~~l~  100 (128)
                       ++++.+++.+++
T Consensus       645 ~~~~La~aL~~ll  657 (694)
T PRK15179        645 TAPDVAEALARIH  657 (694)
T ss_pred             ChHHHHHHHHHHH
Confidence             346777776654

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria

Probab=95.92  E-value=0.013  Score=46.37  Aligned_cols=102  Identities=16%  Similarity=0.181  Sum_probs=55.8

Q ss_pred             cEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCE-EEeChHHHHHHHH
Q 033065           19 AVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL-YCAHPQSLHQVIV   97 (128)
Q Consensus        19 ~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~-~~~~~~~l~~~i~   97 (128)
                      ++....-.+++.++|..||++||=-. +.+.|.+.+++|+|+......--.++...-.-+.....| ++.+.++|.++|.
T Consensus       253 ~i~~~~~~~~~~~ll~~aDiLITDyS-Si~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~~~~eL~~~i~  331 (369)
T PF04464_consen  253 NIIFVSDNEDIYDLLAAADILITDYS-SIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVYNFEELIEAIE  331 (369)
T ss_dssp             TEEE-TT-S-HHHHHHT-SEEEESS--THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EESSHHHHHHHHT
T ss_pred             cEEECCCCCCHHHHHHhcCEEEEech-hHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeCCHHHHHHHHH
Confidence            45554445578999999999999997 599999999999999866410000000000112222223 4458899999988


Q ss_pred             hcchh-------------cCCCCC-CCChHHHHHHHHH
Q 033065           98 GMDLK-------------SLLPYQ-PGDATPVAKLINR  121 (128)
Q Consensus        98 ~l~~~-------------~~~~~~-~~~~~~i~~~i~~  121 (128)
                      +....             ..-.+. ..++++|++.|.+
T Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I~k  369 (369)
T PF04464_consen  332 NIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYIFK  369 (369)
T ss_dssp             THHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHHHH
T ss_pred             hhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHhC
Confidence            75421             111232 3467777777653

They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=95.85  E-value=0.099  Score=41.80  Aligned_cols=72  Identities=21%  Similarity=0.193  Sum_probs=50.7

Q ss_pred             ccEEEEeCh--hhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE---eChHHH
Q 033065           18 LAVDCFTFS--SSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC---AHPQSL   92 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~---~~~~~l   92 (128)
                      .++.+.+-.  .++..+|..|+++||-++.+ +.|+.++|+|+|.+-.      -|+.     .+.|..+.   .+++++
T Consensus       262 ~~v~l~~~l~~~~~l~Ll~~a~~vitdSSgg-i~EA~~lg~Pvv~l~~------R~e~-----~~~g~nvl~vg~~~~~I  329 (365)
T TIGR03568       262 PNFRLFKSLGQERYLSLLKNADAVIGNSSSG-IIEAPSFGVPTINIGT------RQKG-----RLRADSVIDVDPDKEEI  329 (365)
T ss_pred             CCEEEECCCChHHHHHHHHhCCEEEEcChhH-HHhhhhcCCCEEeecC------Cchh-----hhhcCeEEEeCCCHHHH
Confidence            456766543  45889999999999999754 4999999999997731      2321     13343322   378999


Q ss_pred             HHHHHhcch
Q 033065           93 HQVIVGMDL  101 (128)
Q Consensus        93 ~~~i~~l~~  101 (128)
                      .+++.++++
T Consensus       330 ~~a~~~~~~  338 (365)
T TIGR03568       330 VKAIEKLLD  338 (365)
T ss_pred             HHHHHHHhC
Confidence            999888643

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>PLN02846 digalactosyldiacylglycerol synthase

Probab=95.81  E-value=0.077  Score=44.08  Aligned_cols=100  Identities=10%  Similarity=0.060  Sum_probs=60.6

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEec----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCE-EEeChHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISH----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL-YCAHPQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIth----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~-~~~~~~~   91 (128)
                      +.+.+++.-..+-+++++.+|++|.-    +=..++.||+++|+|+|..-.+.   +      +.+.+.+-+ ...+.++
T Consensus       282 ~l~~~vf~G~~~~~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~---~------~~v~~~~ng~~~~~~~~  352 (462)
T PLN02846        282 ELDVRVYPGRDHADPLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS---N------EFFKQFPNCRTYDDGKG  352 (462)
T ss_pred             CCcEEEECCCCCHHHHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC---c------ceeecCCceEecCCHHH
Confidence            33344443344567899999999876    33468999999999999996541   1      223223333 2347888


Q ss_pred             HHHHHHhcchhcCCC-----CCCCChHHHHHHHHHhcCC
Q 033065           92 LHQVIVGMDLKSLLP-----YQPGDATPVAKLINRFLGF  125 (128)
Q Consensus        92 l~~~i~~l~~~~~~~-----~~~~~~~~i~~~i~~~~g~  125 (128)
                      +.+++.+++......     ...-+-+.+++.+.+..++
T Consensus       353 ~a~ai~~~l~~~~~~~~~~a~~~~SWe~~~~~l~~~~~~  391 (462)
T PLN02846        353 FVRATLKALAEEPAPLTDAQRHELSWEAATERFLRVADL  391 (462)
T ss_pred             HHHHHHHHHccCchhHHHHHHHhCCHHHHHHHHHHHhcc
Confidence            888888776422110     0123445566666665554

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT

Probab=95.59  E-value=0.031  Score=42.51  Aligned_cols=45  Identities=22%  Similarity=0.234  Sum_probs=36.7

Q ss_pred             cEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCC
Q 033065           19 AVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNE   64 (128)
Q Consensus        19 ~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~   64 (128)
                      ++.++.-.-++.++|..||.|||-.+ ++-+||+.+|||++++-.+
T Consensus       183 ~~~~~~~~~~~~~Ll~~s~~VvtinS-tvGlEAll~gkpVi~~G~~  227 (269)
T PF05159_consen  183 NVVIIDDDVNLYELLEQSDAVVTINS-TVGLEALLHGKPVIVFGRA  227 (269)
T ss_pred             CeEEECCCCCHHHHHHhCCEEEEECC-HHHHHHHHcCCceEEecCc
Confidence            34444444468999999999999999 4999999999999999554

Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport

>PLN02501 digalactosyldiacylglycerol synthase

Probab=95.46  E-value=0.063  Score=47.00  Aligned_cols=100  Identities=9%  Similarity=0.022  Sum_probs=64.0

Q ss_pred             CcccEEEEeChhhHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCE-EEeChH
Q 033065           16 GLLAVDCFTFSSSIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL-YCAHPQ   90 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~-~~~~~~   90 (128)
                      .+.++.+.++.++...+|+.+|++|.=+    =..++.||+++|+|+|....+.    ...     +..-+.+ ..-+++
T Consensus       599 LgL~V~FLG~~dd~~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG----~e~-----V~~g~nGll~~D~E  669 (794)
T PLN02501        599 LDLNLNFLKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPS----NEF-----FRSFPNCLTYKTSE  669 (794)
T ss_pred             cCCEEEecCCCCCHHHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCC----Cce-----EeecCCeEecCCHH
Confidence            3456778888888888999999988632    2468999999999999997652    111     1111222 234789


Q ss_pred             HHHHHHHhcchhcCCC-----CCCCChHHHHHHHHHhcC
Q 033065           91 SLHQVIVGMDLKSLLP-----YQPGDATPVAKLINRFLG  124 (128)
Q Consensus        91 ~l~~~i~~l~~~~~~~-----~~~~~~~~i~~~i~~~~g  124 (128)
                      ++.++|.+++......     ....+-+.+++.+.+...
T Consensus       670 afAeAI~~LLsd~~~rl~~~a~~~~SWeAaadrLle~~~  708 (794)
T PLN02501        670 DFVAKVKEALANEPQPLTPEQRYNLSWEAATQRFMEYSD  708 (794)
T ss_pred             HHHHHHHHHHhCchhhhHHHHHhhCCHHHHHHHHHHhhc
Confidence            9999988886532111     112344556665555443

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=95.42  E-value=0.063  Score=43.48  Aligned_cols=79  Identities=13%  Similarity=0.121  Sum_probs=53.2

Q ss_pred             ccEEEEeCh--hhHHHHHhhccEEEe-----cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE-EeCh
Q 033065           18 LAVDCFTFS--SSIADHLSSASLVIS-----HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLY-CAHP   89 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~adlvIt-----haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~-~~~~   89 (128)
                      .++++.+++  +++..+|+.||++|.     |-| .++.|++++|+|+|..-....   - ............|+ +.++
T Consensus       305 ~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp---~-~~iv~~~~~g~~G~l~~d~  379 (419)
T cd03806         305 DKVEFVVNAPFEELLEELSTASIGLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGP---L-LDIVVPWDGGPTGFLASTA  379 (419)
T ss_pred             CeEEEecCCCHHHHHHHHHhCeEEEECCccCCcc-cHHHHHHHcCCcEEEEcCCCC---c-hheeeccCCCCceEEeCCH
Confidence            478888886  468999999999874     335 589999999999998754311   0 11110000222333 3489


Q ss_pred             HHHHHHHHhcch
Q 033065           90 QSLHQVIVGMDL  101 (128)
Q Consensus        90 ~~l~~~i~~l~~  101 (128)
                      +++.++|.++++
T Consensus       380 ~~la~ai~~ll~  391 (419)
T cd03806         380 EEYAEAIEKILS  391 (419)
T ss_pred             HHHHHHHHHHHh
Confidence            999999998875

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]

Probab=95.03  E-value=0.16  Score=39.64  Aligned_cols=89  Identities=24%  Similarity=0.259  Sum_probs=53.9

Q ss_pred             HHHHhhccEEEecCch-HHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChHHHHHHHHhcchhcCCCCC
Q 033065           30 ADHLSSASLVISHAGS-GSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQ  108 (128)
Q Consensus        30 ~~~~~~adlvIthaG~-~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~  108 (128)
                      -++|++||.+|+-+-. +.++||++.|||+-++-.+.....--...-+.|.+.+++...+.+.+.     +..-..+|  
T Consensus       239 ~~~La~Adyii~TaDSinM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L~eq~~AR~f~~~~~~-----~e~ysy~P--  311 (329)
T COG3660         239 IDMLAAADYIISTADSINMCSEAASTGKPVFILEPPNFNSLKFRIFIEQLVEQKIARPFEGSNLA-----LEEYSYKP--  311 (329)
T ss_pred             HHHHhhcceEEEecchhhhhHHHhccCCCeEEEecCCcchHHHHHHHHHHHHhhhccccCcchhh-----hcccccCC--
Confidence            5789999988877654 557899999999866522211112223456666666666443332211     11112222  


Q ss_pred             CCChHHHHHHHHHhcCC
Q 033065          109 PGDATPVAKLINRFLGF  125 (128)
Q Consensus       109 ~~~~~~i~~~i~~~~g~  125 (128)
                      -+.++++++.|..++|.
T Consensus       312 LnEt~RiA~~Ira~l~~  328 (329)
T COG3660         312 LNETERIAEEIRAELGR  328 (329)
T ss_pred             chHHHHHHHHHHHHhCC
Confidence            24688999999998874

>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.84  E-value=0.083  Score=42.10  Aligned_cols=100  Identities=20%  Similarity=0.151  Sum_probs=67.0

Q ss_pred             cEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHH--HHHHHHHhC-CCEEEe--ChHHHH
Q 033065           19 AVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQS--ELAEELADR-KHLYCA--HPQSLH   93 (128)
Q Consensus        19 ~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~--~nA~~l~~~-g~~~~~--~~~~l~   93 (128)
                      |..+.---.++.+.+.+||++|..+|. ..-.++-.|||+|-+|-.    +.|.  .+|++-.+. |..+.+  .+....
T Consensus       295 nc~l~lsqqsfadiLH~adaalgmAGT-AtEQavGLGkPvi~fPg~----GPQy~pgFA~rQ~rLLG~sltlv~~~aq~a  369 (412)
T COG4370         295 NCSLWLSQQSFADILHAADAALGMAGT-ATEQAVGLGKPVIGFPGQ----GPQYNPGFAERQQRLLGASLTLVRPEAQAA  369 (412)
T ss_pred             ceEEEEeHHHHHHHHHHHHHHHHhccc-hHHHhhccCCceeecCCC----CCCcChHHHHHHHHHhcceeeecCCchhhH
Confidence            445544456799999999999999994 566688999999999975    3454  466665554 777654  334444


Q ss_pred             HHHHh-cch-----------hcCCCCCCCChHHHHHHHHHhc
Q 033065           94 QVIVG-MDL-----------KSLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        94 ~~i~~-l~~-----------~~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      +.+.+ ++.           -.++.-.+.++..|++.+.+..
T Consensus       370 ~~~~q~ll~dp~r~~air~nGqrRiGqaGaa~rIAe~l~e~a  411 (412)
T COG4370         370 AQAVQELLGDPQRLTAIRHNGQRRIGQAGAARRIAEELGEMA  411 (412)
T ss_pred             HHHHHHHhcChHHHHHHHhcchhhccCcchHHHHHHHHHHhc
Confidence            44443 431           1233445577888888887754

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=94.38  E-value=0.18  Score=45.73  Aligned_cols=75  Identities=16%  Similarity=0.153  Sum_probs=51.5

Q ss_pred             ccEEEEeCh--hhHHHHHhhc----cEEEecC-----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 033065           18 LAVDCFTFS--SSIADHLSSA----SLVISHA-----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC   86 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~a----dlvItha-----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~   86 (128)
                      .++.+.+|.  +++..+|+.|    |++|.-+     | .++.||+++|+|+|.-.....        .+.+....-|+.
T Consensus       548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFG-LvlLEAMAcGlPVVASdvGG~--------~EII~~g~nGlL  618 (1050)
T TIGR02468       548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFG-LTLIEAAAHGLPMVATKNGGP--------VDIHRVLDNGLL  618 (1050)
T ss_pred             CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCC-HHHHHHHHhCCCEEEeCCCCc--------HHHhccCCcEEE
Confidence            356777774  5689999988    5888753     5 599999999999999865421        122222223433


Q ss_pred             e---ChHHHHHHHHhcch
Q 033065           87 A---HPQSLHQVIVGMDL  101 (128)
Q Consensus        87 ~---~~~~l~~~i~~l~~  101 (128)
                      +   +++.|+++|.+++.
T Consensus       619 VdP~D~eaLA~AL~~LL~  636 (1050)
T TIGR02468       619 VDPHDQQAIADALLKLVA  636 (1050)
T ss_pred             ECCCCHHHHHHHHHHHhh
Confidence            3   78889988888753

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=94.32  E-value=0.17  Score=41.38  Aligned_cols=82  Identities=12%  Similarity=0.072  Sum_probs=48.6

Q ss_pred             ccEEEEe-Chhh-HHHHHhhccEEEecC---c-hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C
Q 033065           18 LAVDCFT-FSSS-IADHLSSASLVISHA---G-SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---H   88 (128)
Q Consensus        18 ~~~~v~~-f~~~-~~~~~~~adlvItha---G-~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~   88 (128)
                      .++.+.. |.++ +..+++.||++|.=+   | ..+++||+++|+|+|+-......  +.......-...+.|+..   +
T Consensus       346 ~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~--e~v~~~~~~~~~~~G~l~~~~d  423 (473)
T TIGR02095       346 GNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLA--DTVVDGDPEAESGTGFLFEEYD  423 (473)
T ss_pred             CcEEEEEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCcc--ceEecCCCCCCCCceEEeCCCC
Confidence            3455544 3333 678999999999532   2 24899999999999986554211  101000000111445443   7


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      ++.|.++|.+++.
T Consensus       424 ~~~la~~i~~~l~  436 (473)
T TIGR02095       424 PGALLAALSRALR  436 (473)
T ss_pred             HHHHHHHHHHHHH
Confidence            8888888887654

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>PHA01630 putative group 1 glycosyl transferase

Probab=94.07  E-value=0.083  Score=41.74  Aligned_cols=38  Identities=18%  Similarity=0.346  Sum_probs=31.4

Q ss_pred             hhHHHHHhhccEEEe--cCc--hHHHHHHHHhCCCEEEEeCC
Q 033065           27 SSIADHLSSASLVIS--HAG--SGSIFETLRLGKPLIVVVNE   64 (128)
Q Consensus        27 ~~~~~~~~~adlvIt--haG--~~Ti~E~l~~g~P~I~vP~~   64 (128)
                      +++.++|+.||++|.  +..  ..++.||+++|+|+|.....
T Consensus       201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~g  242 (331)
T PHA01630        201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKG  242 (331)
T ss_pred             HHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCC
Confidence            579999999999984  322  56899999999999998654

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=94.03  E-value=0.1  Score=42.38  Aligned_cols=81  Identities=14%  Similarity=0.073  Sum_probs=49.6

Q ss_pred             ccEEE-EeChhh-HHHHHhhccEEEec-----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---
Q 033065           18 LAVDC-FTFSSS-IADHLSSASLVISH-----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---   87 (128)
Q Consensus        18 ~~~~v-~~f~~~-~~~~~~~adlvIth-----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---   87 (128)
                      .++.+ .+|.++ +..+++.||+++.-     .| .+.+|++++|+|+|+-......+  .......-.+.|.|+..   
T Consensus       351 ~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~g-l~~lEAma~G~pvI~~~~gg~~e--~v~~~~~~~~~~~G~~~~~~  427 (476)
T cd03791         351 GRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCG-LTQMYAMRYGTVPIVRATGGLAD--TVIDYNEDTGEGTGFVFEGY  427 (476)
T ss_pred             CcEEEEEeCCHHHHHHHHHhCCEEECCCCCCCCc-HHHHHHhhCCCCCEECcCCCccc--eEeCCcCCCCCCCeEEeCCC
Confidence            35554 455543 56899999999953     24 58899999999999765542211  01000000123355543   


Q ss_pred             ChHHHHHHHHhcch
Q 033065           88 HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ~~~~l~~~i~~l~~  101 (128)
                      ++++|.++|.+++.
T Consensus       428 ~~~~l~~~i~~~l~  441 (476)
T cd03791         428 NADALLAALRRALA  441 (476)
T ss_pred             CHHHHHHHHHHHHH
Confidence            67888888887753

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2

Probab=93.87  E-value=0.75  Score=33.44  Aligned_cols=77  Identities=16%  Similarity=0.182  Sum_probs=45.6

Q ss_pred             EEEEeChhhHHHHHhhccEEEec-CchHHHHHHHH---------hCCCEEEEeCCCCCCchHHHHHHHHHhCCCE-----
Q 033065           20 VDCFTFSSSIADHLSSASLVISH-AGSGSIFETLR---------LGKPLIVVVNEDLMDNHQSELAEELADRKHL-----   84 (128)
Q Consensus        20 ~~v~~f~~~~~~~~~~adlvIth-aG~~Ti~E~l~---------~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~-----   84 (128)
                      +.+..+......++..||.+|.- +|.||+.|++.         +.||++++=..... ++-...-+.+.+.|..     
T Consensus        81 i~~~~~~~Rk~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~-~~l~~~l~~~~~~gfi~~~~~  159 (178)
T TIGR00730        81 IEVNGMHERKAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHF-DGLVEWLKYSIQEGFISESHL  159 (178)
T ss_pred             EEECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcchH-HHHHHHHHHHHHCCCCCHHHc
Confidence            34444444566778889977665 67899999864         39999888432211 2333344466666643     


Q ss_pred             ----EEeChHHHHHHHH
Q 033065           85 ----YCAHPQSLHQVIV   97 (128)
Q Consensus        85 ----~~~~~~~l~~~i~   97 (128)
                          ++-+++++.+.|+
T Consensus       160 ~~~~~~d~~~e~~~~i~  176 (178)
T TIGR00730       160 KLIHVVSRPDELIEQVQ  176 (178)
T ss_pred             CcEEEcCCHHHHHHHHH
Confidence                1125666666554

This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.

>PRK14098 glycogen synthase; Provisional

Probab=93.76  E-value=0.17  Score=42.08  Aligned_cols=79  Identities=10%  Similarity=0.071  Sum_probs=50.6

Q ss_pred             cccEEEEeChhh--HHHHHhhccEEEecC-----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--
Q 033065           17 LLAVDCFTFSSS--IADHLSSASLVISHA-----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--   87 (128)
Q Consensus        17 ~~~~~v~~f~~~--~~~~~~~adlvItha-----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--   87 (128)
                      +.++.+.++.++  +.++++.||+++.-+     | .+.+|++++|+|.|+.......+.-+    ......+-+++.  
T Consensus       361 ~~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~G-l~~lEAma~G~ppVv~~~GGl~d~v~----~~~~~~~~G~l~~~  435 (489)
T PRK14098        361 PEQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCG-MLQMFAMSYGTIPVAYAGGGIVETIE----EVSEDKGSGFIFHD  435 (489)
T ss_pred             CCCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCch-HHHHHHHhCCCCeEEecCCCCceeee----cCCCCCCceeEeCC
Confidence            346777776644  688999999998543     4 58899999999998875432211100    000112344443  


Q ss_pred             -ChHHHHHHHHhcc
Q 033065           88 -HPQSLHQVIVGMD  100 (128)
Q Consensus        88 -~~~~l~~~i~~l~  100 (128)
                       +++.|.++|.+++
T Consensus       436 ~d~~~la~ai~~~l  449 (489)
T PRK14098        436 YTPEALVAKLGEAL  449 (489)
T ss_pred             CCHHHHHHHHHHHH
Confidence             7888988887754

>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases

Probab=93.11  E-value=1.1  Score=32.67  Aligned_cols=52  Identities=13%  Similarity=0.146  Sum_probs=39.6

Q ss_pred             hcc-EEEecCchHHHH----------------HHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 033065           35 SAS-LVISHAGSGSIF----------------ETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC   86 (128)
Q Consensus        35 ~ad-lvIthaG~~Ti~----------------E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~   86 (128)
                      +|| ++|.=|-++|+.                .+++.++|++++|.......-+.+|.+.|.+.|+.++
T Consensus        75 ~aD~~vIaPATantiAkiA~GiaD~Llt~~a~~~L~~~~pv~i~P~~m~~~~~~~~Nl~~L~~~G~~ii  143 (181)
T TIGR00421        75 PFDGMVVVPCSMKTLSAIANGYADNLITRAADVCLKERRKLVLVPRETPLNSIHLENMLRLSRMGAIIL  143 (181)
T ss_pred             hhCEEEEecCCHhHHHHHHcccCCCHHHHHHHHHHhcCCCEEEEeCCCcCCHHHHHHHHHHHHCCCEEE
Confidence            466 556666666665                3577899999999876655566789999999998875

In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=93.08  E-value=0.28  Score=42.10  Aligned_cols=47  Identities=17%  Similarity=0.221  Sum_probs=39.5

Q ss_pred             HHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh
Q 033065           30 ADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD   80 (128)
Q Consensus        30 ~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~   80 (128)
                      .++|+.||++++.+|. .+.|++.+|+|+|++=..   +.=-...|+++.+
T Consensus       483 ~~~m~aaD~aLaaSGT-aTLEaAL~g~PmVV~YK~---s~Lty~Iak~Lvk  529 (608)
T PRK01021        483 YELMRECDCALAKCGT-IVLETALNQTPTIVTCQL---RPFDTFLAKYIFK  529 (608)
T ss_pred             HHHHHhcCeeeecCCH-HHHHHHHhCCCEEEEEec---CHHHHHHHHHHHh
Confidence            6899999999999995 788999999999998654   2345678888887

>PRK00654 glgA glycogen synthase; Provisional

Probab=92.87  E-value=0.33  Score=39.79  Aligned_cols=79  Identities=13%  Similarity=0.082  Sum_probs=48.7

Q ss_pred             cEE-EEeChhh-HHHHHhhccEEEec-----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C
Q 033065           19 AVD-CFTFSSS-IADHLSSASLVISH-----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---H   88 (128)
Q Consensus        19 ~~~-v~~f~~~-~~~~~~~adlvIth-----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~   88 (128)
                      ++. ..+|.++ +..+++.||++|.=     .| .+++||+++|+|+|+-......  +.........+.+.|+..   +
T Consensus       338 ~v~~~~g~~~~~~~~~~~~aDv~v~PS~~E~~g-l~~lEAma~G~p~V~~~~gG~~--e~v~~~~~~~~~~~G~lv~~~d  414 (466)
T PRK00654        338 KVGVQIGYDEALAHRIYAGADMFLMPSRFEPCG-LTQLYALRYGTLPIVRRTGGLA--DTVIDYNPEDGEATGFVFDDFN  414 (466)
T ss_pred             cEEEEEeCCHHHHHHHHhhCCEEEeCCCCCCch-HHHHHHHHCCCCEEEeCCCCcc--ceeecCCCCCCCCceEEeCCCC
Confidence            444 3567554 56889999999964     24 5899999999999986543211  100000000122445543   7


Q ss_pred             hHHHHHHHHhcc
Q 033065           89 PQSLHQVIVGMD  100 (128)
Q Consensus        89 ~~~l~~~i~~l~  100 (128)
                      ++.|.++|.+++
T Consensus       415 ~~~la~~i~~~l  426 (466)
T PRK00654        415 AEDLLRALRRAL  426 (466)
T ss_pred             HHHHHHHHHHHH
Confidence            888888887764

>PRK10125 putative glycosyl transferase; Provisional

Probab=92.71  E-value=0.28  Score=39.70  Aligned_cols=46  Identities=17%  Similarity=0.261  Sum_probs=36.4

Q ss_pred             cEEEEeCh---hhHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCC
Q 033065           19 AVDCFTFS---SSIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNE   64 (128)
Q Consensus        19 ~~~v~~f~---~~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~   64 (128)
                      +++..+|.   .++.++|+.||++|.-+    -..++.||+++|+|+|.-...
T Consensus       287 ~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~g  339 (405)
T PRK10125        287 NVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSD  339 (405)
T ss_pred             ceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCC
Confidence            46666765   35788999999988643    346899999999999999775

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=92.68  E-value=0.23  Score=40.33  Aligned_cols=70  Identities=16%  Similarity=0.257  Sum_probs=53.3

Q ss_pred             hHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-----------------eChH
Q 033065           28 SIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC-----------------AHPQ   90 (128)
Q Consensus        28 ~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~-----------------~~~~   90 (128)
                      +-.+.|..||+.+..+|. .+.|++.+|+|+|+.-..   +.--...|+++.+..+.-.                 ++++
T Consensus       257 ~~~~a~~~aD~al~aSGT-~tLE~aL~g~P~Vv~Yk~---~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe  332 (381)
T COG0763         257 EKRKAFAAADAALAASGT-ATLEAALAGTPMVVAYKV---KPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPE  332 (381)
T ss_pred             hHHHHHHHhhHHHHhccH-HHHHHHHhCCCEEEEEec---cHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHH
Confidence            346799999999999995 788999999999999665   3344678888887765411                 1577


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      .|..++..++.
T Consensus       333 ~la~~l~~ll~  343 (381)
T COG0763         333 NLARALEELLL  343 (381)
T ss_pred             HHHHHHHHHhc
Confidence            88888777754

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1

Probab=92.67  E-value=0.24  Score=41.75  Aligned_cols=73  Identities=12%  Similarity=0.060  Sum_probs=53.3

Q ss_pred             ccEEEEeChh--hHHHHHhhccEEEecC---chHHHHHHHHhCCCEEEE-eCCCCCCchHHHHHHHHHhCCCEEEeChHH
Q 033065           18 LAVDCFTFSS--SIADHLSSASLVISHA---GSGSIFETLRLGKPLIVV-VNEDLMDNHQSELAEELADRKHLYCAHPQS   91 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~adlvItha---G~~Ti~E~l~~g~P~I~v-P~~~~~~~~Q~~nA~~l~~~g~~~~~~~~~   91 (128)
                      ..+++.+|.+  ++.+.+..|.++|.-+   |-+|.+||+++|+|+|-. |.....++          +.|. ++-+.++
T Consensus       409 ~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqInyg~~~~V~d~----------~NG~-li~d~~~  477 (519)
T TIGR03713       409 ERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQINKVETDYVEHN----------KNGY-IIDDISE  477 (519)
T ss_pred             cEEEEEecCCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCeeecCCceeeEcC----------CCcE-EeCCHHH
Confidence            4788899888  8999999999999865   778999999999999921 22111110          1233 3368888


Q ss_pred             HHHHHHhcch
Q 033065           92 LHQVIVGMDL  101 (128)
Q Consensus        92 l~~~i~~l~~  101 (128)
                      |.++|..++.
T Consensus       478 l~~al~~~L~  487 (519)
T TIGR03713       478 LLKALDYYLD  487 (519)
T ss_pred             HHHHHHHHHh
Confidence            8888877764

This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway

Probab=92.19  E-value=2  Score=29.45  Aligned_cols=63  Identities=16%  Similarity=0.212  Sum_probs=36.8

Q ss_pred             EEEEeChhhHHHHHhhccEEE-ecCchHHHHHHHHh---------CC-CEEEEeCCCCCCchHHHHHHHHHhCCC
Q 033065           20 VDCFTFSSSIADHLSSASLVI-SHAGSGSIFETLRL---------GK-PLIVVVNEDLMDNHQSELAEELADRKH   83 (128)
Q Consensus        20 ~~v~~f~~~~~~~~~~adlvI-thaG~~Ti~E~l~~---------g~-P~I~vP~~~~~~~~Q~~nA~~l~~~g~   83 (128)
                      +.+..+......++..||.+| .-||.||+.|+...         .+ |+|++=.....+ +=...-+.+.+.|.
T Consensus        38 ~~~~~~~~Rk~~m~~~sda~I~lPGG~GTl~El~~~~~~~~l~~~~~~Piil~~~~g~w~-~l~~~l~~~~~~g~  111 (133)
T PF03641_consen   38 IIVDDMFERKEIMIESSDAFIALPGGIGTLDELFEALTLMQLGRHNKVPIILLNIDGFWD-PLLEFLDRMIEEGF  111 (133)
T ss_dssp             EEESSHHHHHHHHHHHESEEEEES-SHHHHHHHHHHHHHHHTTSSTS-EEEEEECGGCCH-HHHHHHHHHHHTTS
T ss_pred             eEeCChHHHHHHHHHhCCEEEEEecCCchHHHHHHHHHHHhhccccCCCEEEeCCcchHH-HHHHHHHHHHHCCC
Confidence            344444555677888999655 55678999988743         45 888885432111 22223345566664

It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....

>PLN02939 transferase, transferring glycosyl groups

Probab=91.57  E-value=0.72  Score=41.72  Aligned_cols=82  Identities=13%  Similarity=0.069  Sum_probs=50.4

Q ss_pred             ccEEEEeChhh--HHHHHhhccEEEec-----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEE---
Q 033065           18 LAVDCFTFSSS--IADHLSSASLVISH-----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD-RKHLYC---   86 (128)
Q Consensus        18 ~~~~v~~f~~~--~~~~~~~adlvIth-----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~-~g~~~~---   86 (128)
                      .++.+..+.++  ...+++.||++|.-     +| .+++||+++|+|.|+.......+--...+...+.. .+-|+.   
T Consensus       837 drV~FlG~~de~lah~IYAaADIFLmPSr~EPfG-LvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~  915 (977)
T PLN02939        837 NNIRLILKYDEALSHSIYAASDMFIIPSMFEPCG-LTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLT  915 (977)
T ss_pred             CeEEEEeccCHHHHHHHHHhCCEEEECCCccCCc-HHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecC
Confidence            35777777665  35799999999964     36 58999999999999876543211000000011111 123433   


Q ss_pred             eChHHHHHHHHhcc
Q 033065           87 AHPQSLHQVIVGMD  100 (128)
Q Consensus        87 ~~~~~l~~~i~~l~  100 (128)
                      .+++.|.++|.+++
T Consensus       916 ~D~eaLa~AL~rAL  929 (977)
T PLN02939        916 PDEQGLNSALERAF  929 (977)
T ss_pred             CCHHHHHHHHHHHH
Confidence            27888888887664

>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis

Probab=91.54  E-value=1  Score=31.50  Aligned_cols=64  Identities=23%  Similarity=0.389  Sum_probs=39.3

Q ss_pred             HHHHhhccEEEecCc-----hHHHHH---HHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChHHHHHHHHh
Q 033065           30 ADHLSSASLVISHAG-----SGSIFE---TLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVG   98 (128)
Q Consensus        30 ~~~~~~adlvIthaG-----~~Ti~E---~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~~~~~l~~~i~~   98 (128)
                      ..+|.+||+||.+-|     .++.++   |+++|||.|++--+.+.  |-.   +.+...-.+.+-+++++.+.|+-
T Consensus        67 ~~li~~aDvVVvrFGekYKQWNaAfDAg~a~AlgKplI~lh~~~~~--HpL---KEvda~A~a~~et~~Qvv~iL~Y  138 (141)
T PF11071_consen   67 RTLIEKADVVVVRFGEKYKQWNAAFDAGYAAALGKPLITLHPEELH--HPL---KEVDAAALAVAETPEQVVEILRY  138 (141)
T ss_pred             HHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhcc--ccH---HHHhHhhHhhhCCHHHHHHHHHH
Confidence            578999999999998     345554   56899999999443221  111   11111112334577777776653

This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]

Probab=91.47  E-value=1.2  Score=35.64  Aligned_cols=64  Identities=23%  Similarity=0.244  Sum_probs=46.2

Q ss_pred             HHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-ChHHHHHHHHhcc
Q 033065           31 DHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-HPQSLHQVIVGMD  100 (128)
Q Consensus        31 ~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-~~~~l~~~i~~l~  100 (128)
                      .++-.|+++|+-||. ...||+..|+|+|.+= |    +.-...-+++.+.|.-+.. ++.+.-+...+++
T Consensus       248 ~Llyya~lvig~ggT-MarEaAlLGtpaIs~~-p----Gkll~vdk~lie~G~~~~s~~~~~~~~~a~~~l  312 (346)
T COG1817         248 SLLYYATLVIGAGGT-MAREAALLGTPAISCY-P----GKLLAVDKYLIEKGLLYHSTDEIAIVEYAVRNL  312 (346)
T ss_pred             HHHhhhheeecCCch-HHHHHHHhCCceEEec-C----CccccccHHHHhcCceeecCCHHHHHHHHHHHh
Confidence            588999999998884 7899999999999993 3    2234566788889988763 5544444333333

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A

Probab=91.44  E-value=0.7  Score=38.60  Aligned_cols=63  Identities=13%  Similarity=0.152  Sum_probs=36.0

Q ss_pred             cEEEEeChh--hHHHHHhhccEEEe---cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCE
Q 033065           19 AVDCFTFSS--SIADHLSSASLVIS---HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL   84 (128)
Q Consensus        19 ~~~v~~f~~--~~~~~~~~adlvIt---haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~   84 (128)
                      ++.+.+..+  +.-..++.+|+++=   ..|.+|.+|++++|+|+|..|-...   -.+.-|..|...|+.
T Consensus       343 Ri~f~~~~~~~ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~---~sR~~aSiL~~lGl~  410 (468)
T PF13844_consen  343 RIIFSPVAPREEHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETM---ASRVGASILRALGLP  410 (468)
T ss_dssp             GEEEEE---HHHHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSG---GGSHHHHHHHHHT-G
T ss_pred             hEEEcCCCCHHHHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCc---hhHHHHHHHHHcCCc
Confidence            466666543  23356677999873   4577899999999999999997643   234566777777876

>PLN02949 transferase, transferring glycosyl groups

Probab=91.17  E-value=0.52  Score=39.05  Aligned_cols=80  Identities=13%  Similarity=0.025  Sum_probs=51.9

Q ss_pred             ccEEEEeCh--hhHHHHHhhccEEEe-----cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChH
Q 033065           18 LAVDCFTFS--SSIADHLSSASLVIS-----HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQ   90 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~adlvIt-----haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~~~~   90 (128)
                      .++++.+++  +++.++|++||++|.     |-| .++.|++++|+|+|......... +....... ...|. .+.+++
T Consensus       335 ~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FG-ivvlEAMA~G~PVIa~~~gGp~~-eIV~~~~~-g~tG~-l~~~~~  410 (463)
T PLN02949        335 GDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFG-ISVVEYMAAGAVPIAHNSAGPKM-DIVLDEDG-QQTGF-LATTVE  410 (463)
T ss_pred             CcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCC-hHHHHHHHcCCcEEEeCCCCCcc-eeeecCCC-Ccccc-cCCCHH
Confidence            468888887  568999999999983     235 48999999999999986542110 00000000 01122 224788


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      ++.++|.++++
T Consensus       411 ~la~ai~~ll~  421 (463)
T PLN02949        411 EYADAILEVLR  421 (463)
T ss_pred             HHHHHHHHHHh
Confidence            99998888753

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=90.95  E-value=0.83  Score=37.81  Aligned_cols=65  Identities=15%  Similarity=0.111  Sum_probs=44.7

Q ss_pred             hhHHHHHhhccEEEecC---c-hHHHHHHHHhCCC----EEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChHHHHHHH
Q 033065           27 SSIADHLSSASLVISHA---G-SGSIFETLRLGKP----LIVVVNEDLMDNHQSELAEELADRKHLYC--AHPQSLHQVI   96 (128)
Q Consensus        27 ~~~~~~~~~adlvItha---G-~~Ti~E~l~~g~P----~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~--~~~~~l~~~i   96 (128)
                      +++..+|+.||+++.-+   | ..++.|++++|+|    +|+--....  .+      .+.  ++.++  .+++.++++|
T Consensus       347 ~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~--~~------~l~--~gllVnP~d~~~lA~aI  416 (456)
T TIGR02400       347 EELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA--AQ------ELN--GALLVNPYDIDGMADAI  416 (456)
T ss_pred             HHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCC--hH------HhC--CcEEECCCCHHHHHHHH
Confidence            56899999999999743   4 3588999999999    555544321  12      222  33333  2789999999


Q ss_pred             Hhcch
Q 033065           97 VGMDL  101 (128)
Q Consensus        97 ~~l~~  101 (128)
                      .++++
T Consensus       417 ~~aL~  421 (456)
T TIGR02400       417 ARALT  421 (456)
T ss_pred             HHHHc
Confidence            88754

This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib

>PRK14099 glycogen synthase; Provisional

Probab=90.93  E-value=0.72  Score=38.33  Aligned_cols=76  Identities=13%  Similarity=0.091  Sum_probs=46.4

Q ss_pred             EEEeChhhHHHHH-hhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHH-Hh--CCCEEEe---Ch
Q 033065           21 DCFTFSSSIADHL-SSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEEL-AD--RKHLYCA---HP   89 (128)
Q Consensus        21 ~v~~f~~~~~~~~-~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l-~~--~g~~~~~---~~   89 (128)
                      .+.+|.+++..+| +.||+++.-+    =..+.+||+++|+|.|+-......  +........ +.  .+.|+..   ++
T Consensus       354 ~~~G~~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~--d~V~~~~~~~~~~~~~~G~l~~~~d~  431 (485)
T PRK14099        354 VVIGYDEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLA--DTVVDANEMAIATGVATGVQFSPVTA  431 (485)
T ss_pred             EEeCCCHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCcc--ceeecccccccccCCCceEEeCCCCH
Confidence            5778888888887 5699998521    135899999999887775433211  111111001 11  1234443   78


Q ss_pred             HHHHHHHHh
Q 033065           90 QSLHQVIVG   98 (128)
Q Consensus        90 ~~l~~~i~~   98 (128)
                      +.|.++|.+
T Consensus       432 ~~La~ai~~  440 (485)
T PRK14099        432 DALAAALRK  440 (485)
T ss_pred             HHHHHHHHH
Confidence            889988876

>TIGR03646 YtoQ_fam YtoQ family protein

Probab=90.20  E-value=1.3  Score=31.05  Aligned_cols=64  Identities=22%  Similarity=0.338  Sum_probs=38.8

Q ss_pred             HHHHhhccEEEecCc-----hHHHHH---HHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChHHHHHHHHh
Q 033065           30 ADHLSSASLVISHAG-----SGSIFE---TLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVG   98 (128)
Q Consensus        30 ~~~~~~adlvIthaG-----~~Ti~E---~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~~~~~l~~~i~~   98 (128)
                      ..+|.+||+||.+-|     .++.++   ++++|||.|++-.+.+...=-+..|..     .+.+-+|+++.+.++-
T Consensus        70 ~~li~~aDvvVvrFGekYKQWNaAfDAg~aaAlgKplI~lh~~~~~HpLKEvdaaA-----~avaetp~Qvv~iL~Y  141 (144)
T TIGR03646        70 RKLIEKADVVIALFGEKYKQWNAAFDAGYAAALGKPLIILRPEELIHPLKEVDNKA-----QAVVETPEQAIETLKY  141 (144)
T ss_pred             HHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhccccHHHHhHHH-----HHHhcCHHHHHHHHHH
Confidence            578999999999988     345544   568999999994443211111112221     2233477777666653

Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.

>TIGR02470 sucr_synth sucrose synthase

Probab=90.07  E-value=1.9  Score=38.32  Aligned_cols=74  Identities=14%  Similarity=0.141  Sum_probs=48.0

Q ss_pred             ccEEEEeCh---hhHHHHHh----hccEEEecC-----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE
Q 033065           18 LAVDCFTFS---SSIADHLS----SASLVISHA-----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLY   85 (128)
Q Consensus        18 ~~~~v~~f~---~~~~~~~~----~adlvItha-----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~   85 (128)
                      -++++.++.   .+..++++    .+|++|.=+     | .|+.||+++|+|+|.-...    +    ..+.+.+..-|+
T Consensus       619 g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFG-LvvLEAMAcGlPVVAT~~G----G----~~EiV~dg~tGf  689 (784)
T TIGR02470       619 GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFG-LTVLEAMTCGLPTFATRFG----G----PLEIIQDGVSGF  689 (784)
T ss_pred             CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCC-HHHHHHHHcCCCEEEcCCC----C----HHHHhcCCCcEE
Confidence            367777764   23445554    346877543     5 5999999999999986543    2    334444444455


Q ss_pred             Ee---ChHHHHHHHHhcc
Q 033065           86 CA---HPQSLHQVIVGMD  100 (128)
Q Consensus        86 ~~---~~~~l~~~i~~l~  100 (128)
                      .+   +++.+.++|.+++
T Consensus       690 LVdp~D~eaLA~aL~~ll  707 (784)
T TIGR02470       690 HIDPYHGEEAAEKIVDFF  707 (784)
T ss_pred             EeCCCCHHHHHHHHHHHH
Confidence            44   6788888887764

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2

Probab=88.76  E-value=0.78  Score=30.35  Aligned_cols=35  Identities=31%  Similarity=0.595  Sum_probs=26.9

Q ss_pred             HHHHhhccEEEe---c--CchHHHHHHH---HhCCCEEEEeCC
Q 033065           30 ADHLSSASLVIS---H--AGSGSIFETL---RLGKPLIVVVNE   64 (128)
Q Consensus        30 ~~~~~~adlvIt---h--aG~~Ti~E~l---~~g~P~I~vP~~   64 (128)
                      -+.|.+||+||.   .  .+.||.+|+-   +.|||++++-..
T Consensus        56 ~~~i~~~D~via~l~~~~~d~Gt~~ElG~A~algkpv~~~~~d   98 (113)
T PF05014_consen   56 LEGIRECDIVIANLDGFRPDSGTAFELGYAYALGKPVILLTED   98 (113)
T ss_dssp             HHHHHHSSEEEEEECSSS--HHHHHHHHHHHHTTSEEEEEECC
T ss_pred             HHHHHHCCEEEEECCCCCCCCcHHHHHHHHHHCCCEEEEEEcC
Confidence            378999998874   2  6789999964   789999999664

4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....

>PRK09932 glycerate kinase II; Provisional

Probab=88.34  E-value=2.1  Score=34.89  Aligned_cols=89  Identities=16%  Similarity=0.153  Sum_probs=52.0

Q ss_pred             hHHHHHhhccEEEecCc-----------hHHHHH-HHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe----ChHH
Q 033065           28 SIADHLSSASLVISHAG-----------SGSIFE-TLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA----HPQS   91 (128)
Q Consensus        28 ~~~~~~~~adlvIthaG-----------~~Ti~E-~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~----~~~~   91 (128)
                      ++++.++.||+|||-=|           ...+.. +-.+++|+|++--.  ++    .+.+.+.+.|+.-+.    .+..
T Consensus       277 ~l~~~l~~ADlVITGEG~~D~Qt~~GK~p~~Va~~A~~~~~Pvi~i~G~--~~----~~~~~~~~~g~~~~~~i~~~~~~  350 (381)
T PRK09932        277 NLEQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGV--LG----DGVEVVHQYGIDAVFSILPRLAP  350 (381)
T ss_pred             ChHHHhccCCEEEECCCcccccccCCccHHHHHHHHHHcCCCEEEEecc--cC----CChHHHHhcCceEEEEcCCCCCC
Confidence            58899999999999887           233443 44678999998532  11    123456677765332    3445


Q ss_pred             HHHHHHhcchhcCCCCCCCChHHHHHHHHHhcCCCC
Q 033065           92 LHQVIVGMDLKSLLPYQPGDATPVAKLINRFLGFPD  127 (128)
Q Consensus        92 l~~~i~~l~~~~~~~~~~~~~~~i~~~i~~~~g~~~  127 (128)
                      |.+++++..+..     ...++++++.+.--.|++|
T Consensus       351 l~~a~~~~~~~l-----~~~~~~~~~~~~~~~~~~~  381 (381)
T PRK09932        351 LAEVLASGETNL-----FNSARNIACAIKIGQGIKN  381 (381)
T ss_pred             HHHHHHHHHHHH-----HHHHHHHHHHHHhhccCCC
Confidence            666665542211     1235556665532255554

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=88.27  E-value=0.72  Score=35.80  Aligned_cols=35  Identities=29%  Similarity=0.300  Sum_probs=31.1

Q ss_pred             hhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEE
Q 033065           26 SSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVV   61 (128)
Q Consensus        26 ~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~v   61 (128)
                      +.++..+++.||++||--. |.+.=|.+.|+|+|.+
T Consensus       244 L~elaali~~a~l~I~nDS-Gp~HlA~A~g~p~val  278 (322)
T PRK10964        244 LEQVARVLAGAKAVVSVDT-GLSHLTAALDRPNITL  278 (322)
T ss_pred             HHHHHHHHHhCCEEEecCC-cHHHHHHHhCCCEEEE
Confidence            4578899999999999887 5788899999999988

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=87.78  E-value=1.7  Score=31.51  Aligned_cols=74  Identities=18%  Similarity=0.270  Sum_probs=49.2

Q ss_pred             ccEEEEeChh--hHHHHHhhccEEEecC---c-hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC--CCEEEe--
Q 033065           18 LAVDCFTFSS--SIADHLSSASLVISHA---G-SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR--KHLYCA--   87 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~adlvItha---G-~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~--g~~~~~--   87 (128)
                      .++...++.+  ++..+++.||+++.-.   | ..++.|++++|+|+|.-..+.        ..+.+...  |. +..  
T Consensus       257 ~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~--------~~e~~~~~~~g~-~~~~~  327 (381)
T COG0438         257 DNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGG--------IPEVVEDGETGL-LVPPG  327 (381)
T ss_pred             CcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCC--------hHHHhcCCCceE-ecCCC
Confidence            4567778776  6788899899888772   2 245799999999998876641        12222222  34 332  


Q ss_pred             ChHHHHHHHHhcc
Q 033065           88 HPQSLHQVIVGMD  100 (128)
Q Consensus        88 ~~~~l~~~i~~l~  100 (128)
                      +.+.+.+++..+.
T Consensus       328 ~~~~~~~~i~~~~  340 (381)
T COG0438         328 DVEELADALEQLL  340 (381)
T ss_pred             CHHHHHHHHHHHh
Confidence            3678888777664

>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1

Probab=87.51  E-value=2.7  Score=29.84  Aligned_cols=36  Identities=31%  Similarity=0.469  Sum_probs=25.9

Q ss_pred             HHHHhhccEEEe-cCchHHHHH---HHHhCCCEEEEeCCC
Q 033065           30 ADHLSSASLVIS-HAGSGSIFE---TLRLGKPLIVVVNED   65 (128)
Q Consensus        30 ~~~~~~adlvIt-haG~~Ti~E---~l~~g~P~I~vP~~~   65 (128)
                      ..++..||.+|. -+|.||+.|   ++.++||+++++...
T Consensus        86 ~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~~g  125 (159)
T TIGR00725        86 FILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRGTG  125 (159)
T ss_pred             HHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEECCC
Confidence            456677885554 467777765   567999999998764

This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.

>PLN02316 synthase/transferase

Probab=87.36  E-value=2.7  Score=38.42  Aligned_cols=82  Identities=12%  Similarity=0.104  Sum_probs=49.0

Q ss_pred             cEEEEeChhh-H-HHHHhhccEEEecC-----chHHHHHHHHhCCCEEEEeCCCCCC----c-hHHHHHHHHHhCCCEEE
Q 033065           19 AVDCFTFSSS-I-ADHLSSASLVISHA-----GSGSIFETLRLGKPLIVVVNEDLMD----N-HQSELAEELADRKHLYC   86 (128)
Q Consensus        19 ~~~v~~f~~~-~-~~~~~~adlvItha-----G~~Ti~E~l~~g~P~I~vP~~~~~~----~-~Q~~nA~~l~~~g~~~~   86 (128)
                      ++.++.+.++ + +.+|+.||+++.-+     | .+.+||+++|+|.|+-......+    . ++...++.-...+-|+.
T Consensus       901 rV~f~g~~de~lah~iyaaADiflmPS~~EP~G-LvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGfl  979 (1036)
T PLN02316        901 RARLCLTYDEPLSHLIYAGADFILVPSIFEPCG-LTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFS  979 (1036)
T ss_pred             eEEEEecCCHHHHHHHHHhCcEEEeCCcccCcc-HHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEE
Confidence            4555544444 3 47999999999543     6 59999999999999865542211    0 00001110000123444


Q ss_pred             e---ChHHHHHHHHhcch
Q 033065           87 A---HPQSLHQVIVGMDL  101 (128)
Q Consensus        87 ~---~~~~l~~~i~~l~~  101 (128)
                      .   +++.|..+|.+++.
T Consensus       980 f~~~d~~aLa~AL~raL~  997 (1036)
T PLN02316        980 FDGADAAGVDYALNRAIS  997 (1036)
T ss_pred             eCCCCHHHHHHHHHHHHh
Confidence            3   78888888888764

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor

Probab=87.11  E-value=1.3  Score=36.50  Aligned_cols=67  Identities=9%  Similarity=0.025  Sum_probs=43.2

Q ss_pred             hhhHHHHHhhccEEEec---Cc-hHHHHHHHHhCCC---EEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChHHHHHHH
Q 033065           26 SSSIADHLSSASLVISH---AG-SGSIFETLRLGKP---LIVVVNEDLMDNHQSELAEELADRKHLYC--AHPQSLHQVI   96 (128)
Q Consensus        26 ~~~~~~~~~~adlvIth---aG-~~Ti~E~l~~g~P---~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~--~~~~~l~~~i   96 (128)
                      .+++..+|+.||++|.-   =| ..++.|++++|+|   +|++...... .++       . .+..++  -+++.++++|
T Consensus       351 ~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~-~~~-------~-~~g~lv~p~d~~~la~ai  421 (460)
T cd03788         351 REELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA-AEE-------L-SGALLVNPYDIDEVADAI  421 (460)
T ss_pred             HHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccc-hhh-------c-CCCEEECCCCHHHHHHHH
Confidence            35799999999999952   23 3578999999999   4444332110 111       1 222233  2788999999


Q ss_pred             Hhcch
Q 033065           97 VGMDL  101 (128)
Q Consensus        97 ~~l~~  101 (128)
                      .+++.
T Consensus       422 ~~~l~  426 (460)
T cd03788         422 HRALT  426 (460)
T ss_pred             HHHHc
Confidence            88754

It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.

>PLN00142 sucrose synthase

Probab=86.94  E-value=3.3  Score=36.94  Aligned_cols=62  Identities=16%  Similarity=0.238  Sum_probs=40.0

Q ss_pred             HHHHHh-hccEEEecC-----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChHHHHHHHHhc
Q 033065           29 IADHLS-SASLVISHA-----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---HPQSLHQVIVGM   99 (128)
Q Consensus        29 ~~~~~~-~adlvItha-----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~~~~l~~~i~~l   99 (128)
                      +..+++ .+|++|.-+     | .|+.||+++|+|+|.-...    +    ..+.+.+..-|+.+   +++.+.++|.++
T Consensus       659 Lyr~iadaaDVfVlPS~~EgFG-LvvLEAMA~GlPVVATdvG----G----~~EIV~dG~tG~LV~P~D~eaLA~aI~~l  729 (815)
T PLN00142        659 LYRYIADTKGAFVQPALYEAFG-LTVVEAMTCGLPTFATCQG----G----PAEIIVDGVSGFHIDPYHGDEAANKIADF  729 (815)
T ss_pred             HHHHHHhhCCEEEeCCcccCCC-HHHHHHHHcCCCEEEcCCC----C----HHHHhcCCCcEEEeCCCCHHHHHHHHHHH
Confidence            445555 468887542     5 5999999999999886543    2    22333333345543   678888887654

>PRK10017 colanic acid biosynthesis protein; Provisional

Probab=86.82  E-value=4.6  Score=33.24  Aligned_cols=66  Identities=15%  Similarity=0.162  Sum_probs=48.5

Q ss_pred             hHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE------eChHHHHHHHHhcch
Q 033065           28 SIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC------AHPQSLHQVIVGMDL  101 (128)
Q Consensus        28 ~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~------~~~~~l~~~i~~l~~  101 (128)
                      ++..++++||++|+.==++++. ++..|+|.|.+++.       ......+...|+.-+      ++.++|.+.+.++++
T Consensus       320 e~~~iIs~~dl~ig~RlHa~I~-a~~~gvP~i~i~Y~-------~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~  391 (426)
T PRK10017        320 EMGKILGACELTVGTRLHSAII-SMNFGTPAIAINYE-------HKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLG  391 (426)
T ss_pred             HHHHHHhhCCEEEEecchHHHH-HHHcCCCEEEeeeh-------HHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHh
Confidence            4668999999999977665444 89999999999983       345666677776632      256677777776654

>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis

Probab=86.21  E-value=1.8  Score=31.50  Aligned_cols=36  Identities=36%  Similarity=0.552  Sum_probs=32.1

Q ss_pred             hhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeC
Q 033065           27 SSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVN   63 (128)
Q Consensus        27 ~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~   63 (128)
                      .++.+++++|+++||.-=++++. ++.+|+|.|.+.+
T Consensus       249 ~~~~~~~~~~~~~Is~RlH~~I~-a~~~g~P~i~i~y  284 (286)
T PF04230_consen  249 DELLELISQADLVISMRLHGAIL-ALSLGVPVIAISY  284 (286)
T ss_pred             HHHHHHHhcCCEEEecCCHHHHH-HHHcCCCEEEEec
Confidence            56889999999999999987666 9999999999976

CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].

>TIGR02919 accessory Sec system glycosyltransferase GtfB

Probab=86.06  E-value=2.7  Score=34.77  Aligned_cols=76  Identities=8%  Similarity=0.131  Sum_probs=50.8

Q ss_pred             ccEEEEe-Chh-hHHHHHhhccEE--Eec--CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChH
Q 033065           18 LAVDCFT-FSS-SIADHLSSASLV--ISH--AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC-AHPQ   90 (128)
Q Consensus        18 ~~~~v~~-f~~-~~~~~~~~adlv--Ith--aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~-~~~~   90 (128)
                      .|+.+++ |.+ ++.+++..||+.  |+|  +-..++.||+.+|+|++..=...+   .+.....     |..+. -+++
T Consensus       328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i~~-----g~l~~~~~~~  399 (438)
T TIGR02919       328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFIAS-----ENIFEHNEVD  399 (438)
T ss_pred             CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccC---CcccccC-----CceecCCCHH
Confidence            4555554 466 899999999955  455  445789999999999999866532   1121221     44332 3778


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      ++.++|.+++.
T Consensus       400 ~m~~~i~~lL~  410 (438)
T TIGR02919       400 QLISKLKDLLN  410 (438)
T ss_pred             HHHHHHHHHhc
Confidence            88888877753

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.

>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []

Probab=85.89  E-value=0.39  Score=34.46  Aligned_cols=30  Identities=17%  Similarity=0.374  Sum_probs=20.9

Q ss_pred             hhccEEEecCchHHHHHHHHhCCCEEEEeCC
Q 033065           34 SSASLVISHAGSGSIFETLRLGKPLIVVVNE   64 (128)
Q Consensus        34 ~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~   64 (128)
                      ..+|++|||||...+..-.. ++|+|-+|..
T Consensus        33 ~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s   62 (176)
T PF06506_consen   33 EGADVIISRGGTAELLRKHV-SIPVVEIPIS   62 (176)
T ss_dssp             TT-SEEEEEHHHHHHHHCC--SS-EEEE---
T ss_pred             cCCeEEEECCHHHHHHHHhC-CCCEEEECCC
Confidence            66999999999877777666 9999999985

Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.

>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=84.96  E-value=2.5  Score=33.40  Aligned_cols=54  Identities=22%  Similarity=0.321  Sum_probs=38.5

Q ss_pred             HHHhhccEEEecCchHHHHHHHHh----CCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChHHHHHHHHhcch
Q 033065           31 DHLSSASLVISHAGSGSIFETLRL----GKPLIVVVNEDLMDNHQSELAEELADRKHLYC--AHPQSLHQVIVGMDL  101 (128)
Q Consensus        31 ~~~~~adlvIthaG~~Ti~E~l~~----g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~--~~~~~l~~~i~~l~~  101 (128)
                      ...+.+|++|+=||=||+..++..    ++|++.|...     +            .++.  .+++++.++++++.+
T Consensus        68 ~~~~~~D~vi~lGGDGT~L~aar~~~~~~~PilGIN~G-----~------------lGFL~~~~~~~~~~~l~~i~~  127 (306)
T PRK03372         68 DAADGCELVLVLGGDGTILRAAELARAADVPVLGVNLG-----H------------VGFLAEAEAEDLDEAVERVVD  127 (306)
T ss_pred             hcccCCCEEEEEcCCHHHHHHHHHhccCCCcEEEEecC-----C------------CceeccCCHHHHHHHHHHHHc
Confidence            334568999999999999998764    7898888653     1            3333  356777777776653

>TIGR00732 dprA DNA protecting protein DprA

Probab=84.92  E-value=4.8  Score=30.15  Aligned_cols=61  Identities=16%  Similarity=0.217  Sum_probs=40.3

Q ss_pred             HhhccEEEec---Cc-hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChHHHHHH
Q 033065           33 LSSASLVISH---AG-SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQV   95 (128)
Q Consensus        33 ~~~adlvIth---aG-~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~~~~~l~~~   95 (128)
                      ++.+=+|+..   +| ..|+..++..|+|+..+|-..  ++.+..=...|-+.|+..+.+.+++.+.
T Consensus       155 ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~--~~~~~~G~~~Li~~GA~~i~~~~d~~~~  219 (220)
T TIGR00732       155 LSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDL--NSPESDGCHKLIEQGAALITSAKDILET  219 (220)
T ss_pred             hcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCC--CCccchHHHHHHHCCCEEECCHHHHHHh
Confidence            4444455543   23 356667788999999998652  3445555566778898887888887653

Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.

>PRK05920 aromatic acid decarboxylase; Validated

Probab=83.96  E-value=4.1  Score=30.31  Aligned_cols=37  Identities=22%  Similarity=0.171  Sum_probs=29.0

Q ss_pred             HHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 033065           50 ETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC   86 (128)
Q Consensus        50 E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~   86 (128)
                      +++..++|++++|...+...-..+|.+.|.+.|+.++
T Consensus       125 ~~L~~~~pvvi~P~~m~~~~~~~~nl~~L~~~G~~ii  161 (204)
T PRK05920        125 VVLKERRKLILVPRETPLSLIHLENMLKLAEAGAIIL  161 (204)
T ss_pred             HHHhcCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEe
Confidence            4577899999999865444445689999999998876

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=83.81  E-value=2.4  Score=32.07  Aligned_cols=36  Identities=25%  Similarity=0.459  Sum_probs=29.6

Q ss_pred             hhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEe
Q 033065           26 SSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVV   62 (128)
Q Consensus        26 ~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP   62 (128)
                      ..++..+++.||++||.-. |++.-|.+.|+|+|.+=
T Consensus       189 l~e~~~li~~~~l~I~~Ds-g~~HlA~a~~~p~i~l~  224 (279)
T cd03789         189 LRELAALLARADLVVTNDS-GPMHLAAALGTPTVALF  224 (279)
T ss_pred             HHHHHHHHHhCCEEEeeCC-HHHHHHHHcCCCEEEEE
Confidence            3568999999999999954 45666789999999883

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PLN02929 NADH kinase

Probab=83.78  E-value=2.7  Score=33.22  Aligned_cols=72  Identities=17%  Similarity=0.309  Sum_probs=44.6

Q ss_pred             HHHHhhccEEEecCchHHHHHHHH---hCCCEEEEeCCCCCCchHHHHHHHHHhCC-CEEE--eChHHHHHHHHhcch
Q 033065           30 ADHLSSASLVISHAGSGSIFETLR---LGKPLIVVVNEDLMDNHQSELAEELADRK-HLYC--AHPQSLHQVIVGMDL  101 (128)
Q Consensus        30 ~~~~~~adlvIthaG~~Ti~E~l~---~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g-~~~~--~~~~~l~~~i~~l~~  101 (128)
                      ......+|+||+-||=||+..++.   .++|++.|-......++=...-..+...+ .|+.  .+++++.+.|.++++
T Consensus        59 ~~~~~~~Dlvi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~~~r~lGfL~~~~~~~~~~~L~~il~  136 (301)
T PLN02929         59 SQPIRDVDLVVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFDARRSTGHLCAATAEDFEQVLDDVLF  136 (301)
T ss_pred             ccccCCCCEEEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccccccCccccccCCHHHHHHHHHHHHc
Confidence            455678999999999999998864   36899988542100000011112233222 4433  478888888888864

>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=83.15  E-value=3.3  Score=32.00  Aligned_cols=30  Identities=20%  Similarity=0.358  Sum_probs=25.2

Q ss_pred             hhccEEEecCchHHHHHHHH------hCCCEEEEeC
Q 033065           34 SSASLVISHAGSGSIFETLR------LGKPLIVVVN   63 (128)
Q Consensus        34 ~~adlvIthaG~~Ti~E~l~------~g~P~I~vP~   63 (128)
                      ..+|++|+-||=||+..++.      .++|++-|-.
T Consensus        34 ~~~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~   69 (265)
T PRK04885         34 KNPDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHT   69 (265)
T ss_pred             cCCCEEEEECCcHHHHHHHHHhcccCCCCeEEEEeC
Confidence            35899999999999999985      4778888765

>PRK10342 glycerate kinase I; Provisional

Probab=82.41  E-value=4.9  Score=32.81  Aligned_cols=66  Identities=17%  Similarity=0.261  Sum_probs=41.6

Q ss_pred             hHHHHHhhccEEEecCc------------hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--e--ChHH
Q 033065           28 SIADHLSSASLVISHAG------------SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC--A--HPQS   91 (128)
Q Consensus        28 ~~~~~~~~adlvIthaG------------~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~--~--~~~~   91 (128)
                      ++++.++.||+|||-=|            .+-.--+..+++|+|++--.  +.    ...+.+.+.|+.-+  +  .+..
T Consensus       277 ~l~~~l~~ADLVITGEG~~D~QTl~GK~p~gVa~~A~~~~vPviai~G~--~~----~~~~~~~~~g~~av~~i~~~~~~  350 (381)
T PRK10342        277 NLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGS--LT----DDVGVVHQHGIDAVFSVLTSIGT  350 (381)
T ss_pred             CHHHHhccCCEEEECCCcCcccccCCccHHHHHHHHHHhCCCEEEEecc--cC----CChHHHHhcCceEEEEcCCCCCC
Confidence            58899999999999877            23333455789999999532  11    12345667776533  2  2445


Q ss_pred             HHHHHHhc
Q 033065           92 LHQVIVGM   99 (128)
Q Consensus        92 l~~~i~~l   99 (128)
                      |.+++++.
T Consensus       351 l~~a~~~~  358 (381)
T PRK10342        351 LDEAFRGA  358 (381)
T ss_pred             HHHHHHHH
Confidence            55555443

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1

Probab=82.31  E-value=3.4  Score=25.74  Aligned_cols=51  Identities=24%  Similarity=0.283  Sum_probs=35.6

Q ss_pred             cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCC-CEEE-eChHHHHHHHHhcch
Q 033065           42 HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRK-HLYC-AHPQSLHQVIVGMDL  101 (128)
Q Consensus        42 haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g-~~~~-~~~~~l~~~i~~l~~  101 (128)
                      .+-...+.|++++|+|+|.-+.+        ..... ...| .++. -+++++.+.|..++.
T Consensus         9 ~~~~~r~~E~~a~G~~vi~~~~~--------~~~~~-~~~~~~~~~~~~~~el~~~i~~ll~   61 (92)
T PF13524_consen    9 DGPNMRIFEAMACGTPVISDDSP--------GLREI-FEDGEHIITYNDPEELAEKIEYLLE   61 (92)
T ss_pred             CCCchHHHHHHHCCCeEEECChH--------HHHHH-cCCCCeEEEECCHHHHHHHHHHHHC
Confidence            44456899999999999987542        33344 3334 3333 489999999998864

>TIGR02699 archaeo_AfpA archaeoflavoprotein AfpA

Probab=81.91  E-value=3.5  Score=29.93  Aligned_cols=63  Identities=14%  Similarity=0.251  Sum_probs=40.1

Q ss_pred             hhcc-EEEecCchHHHH----------------HHHHhCCCEEEEeCCC-------CCC-chHH---------HHHHHHH
Q 033065           34 SSAS-LVISHAGSGSIF----------------ETLRLGKPLIVVVNED-------LMD-NHQS---------ELAEELA   79 (128)
Q Consensus        34 ~~ad-lvIthaG~~Ti~----------------E~l~~g~P~I~vP~~~-------~~~-~~Q~---------~nA~~l~   79 (128)
                      .++| ++|.=|-++|+.                +++..++|++++|...       ... +.+.         +|.+.|.
T Consensus        77 ~~~D~~vVaPaTaNtlakiA~GiaD~l~t~~~~~~lk~~~pvvi~P~mn~~~~v~t~~p~~~~~~~~~r~~d~~~~~~L~  156 (174)
T TIGR02699        77 GKYDFLLIAPATANTVAKIAYGIADTLVTNAVIQAAKAKVPVYIMPSDYKEGTVKTALPSGRKLELRMRKVDVENVEKLA  156 (174)
T ss_pred             cccCEEEEEeCCHHHHHHHHccccCcHHHHHHHHHhccCCCEEEEECcCCCCceeeccCCCCceeeeeccccHHHHHHHh
Confidence            3455 455666666554                3345699999999841       111 1232         6888888


Q ss_pred             hC-CCEEEeChHHHHHHH
Q 033065           80 DR-KHLYCAHPQSLHQVI   96 (128)
Q Consensus        80 ~~-g~~~~~~~~~l~~~i   96 (128)
                      +. |..+..++++|.+.+
T Consensus       157 ~~~gv~v~~~~~~~~~~~  174 (174)
T TIGR02699       157 QMEGIEILTKPEDIYKIF  174 (174)
T ss_pred             hCCCeEEECCHHHHHhhC
Confidence            87 666767888887653

The prototypical member of this archaeal protein family is AF1518 from Archaeoglobus fulgidus. This homodimer with two non-covalently bound FMN cofactors can receive electrons from ferredoxin, but not from a number of other electron donors such as NADH or rubredoxin. It can then donate electrons to various reductases.

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis

Probab=81.60  E-value=1.9  Score=37.12  Aligned_cols=35  Identities=17%  Similarity=0.154  Sum_probs=30.3

Q ss_pred             HHHHHhhccEEEecC-----chHHHHHHHHhCCCEEEEeCC
Q 033065           29 IADHLSSASLVISHA-----GSGSIFETLRLGKPLIVVVNE   64 (128)
Q Consensus        29 ~~~~~~~adlvItha-----G~~Ti~E~l~~g~P~I~vP~~   64 (128)
                      ..++++.||++|.=+     | -|+.||+++|+|+|.-...
T Consensus       468 y~E~~~g~dl~v~PS~yE~fG-~~~lEAma~G~PvI~t~~~  507 (590)
T cd03793         468 YEEFVRGCHLGVFPSYYEPWG-YTPAECTVMGIPSITTNLS  507 (590)
T ss_pred             hHHHhhhceEEEeccccCCCC-cHHHHHHHcCCCEEEccCc
Confidence            578999999999843     5 5999999999999998775

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.

>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional

Probab=80.97  E-value=10  Score=27.77  Aligned_cols=52  Identities=15%  Similarity=0.218  Sum_probs=37.5

Q ss_pred             hcc-EEEecCchHHHHH----------------HHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 033065           35 SAS-LVISHAGSGSIFE----------------TLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC   86 (128)
Q Consensus        35 ~ad-lvIthaG~~Ti~E----------------~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~   86 (128)
                      +|| ++|.=|-++|+..                +++.++|++++|...+...--.+|...|.+.|+.++
T Consensus        78 ~aD~~vIaPaTaNtlAKiA~GiaDnLlt~~a~~~L~~~~pvii~P~~M~~~p~~~~Nl~~L~~~G~~vi  146 (185)
T PRK06029         78 GTDGMVIAPCSMKTLAKIAHGYSDNLITRAADVMLKERRRLVLCVRETPLHLGHLRNMTKLAEMGAIIM  146 (185)
T ss_pred             hhCEEEEeeCCHhHHHHHHccccCcHHHHHHHHHHhcCCCEEEEeccccCCHHHHHHHHHHHHCcCEEE
Confidence            566 5667777777653                456899999999765433333579999999998876

>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional

Probab=80.07  E-value=4.8  Score=31.45  Aligned_cols=33  Identities=27%  Similarity=0.415  Sum_probs=26.2

Q ss_pred             HHHhhccEEEecCchHHHHHHHHh----CCCEEEEeC
Q 033065           31 DHLSSASLVISHAGSGSIFETLRL----GKPLIVVVN   63 (128)
Q Consensus        31 ~~~~~adlvIthaG~~Ti~E~l~~----g~P~I~vP~   63 (128)
                      +.-..+|++|+-||=||+.+++..    ++|++-|-.
T Consensus        59 ~~~~~~d~vi~~GGDGt~l~~~~~~~~~~~pilGIn~   95 (291)
T PRK02155         59 EIGARADLAVVLGGDGTMLGIGRQLAPYGVPLIGINH   95 (291)
T ss_pred             HhccCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEcC
Confidence            333468999999999999999863    678887754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	128
2ks6_A	201	Nmr Solution Structure Of Alg13 --- Obtained With I		3e-11
2jzc_A	224	Nmr Solution Structure Of Alg13: The Sugar Donor Su		3e-11

>pdb|2KS6|A Chain A, Nmr Solution Structure Of Alg13 --- Obtained With Iterative Cs-Rosetta From Backbone Nmr Data Length = 201

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 39  VISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHP 89
           VISHAG+GSI ++LRL KPLIV VN+ LMDNHQ ++A++  +  +++   P
Sbjct: 113 VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCAP 163

>pdb|2JZC|A Chain A, Nmr Solution Structure Of Alg13: The Sugar Donor Subunit Of A Yeast N-Acetylglucosamine Transferase. Northeast Structural Genomics Consortium Target Yg1 Length = 224

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 39  VISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHP 89
           VISHAG+GSI ++LRL KPLIV VN+ LMDNHQ ++A++  +  +++   P
Sbjct: 136 VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCAP 186

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	128
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	1e-29
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	9e-05
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	9e-05
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	2e-04
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	2e-04
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	2e-04
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	3e-04
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	4e-04
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	6e-04
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	7e-04
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	9e-04

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A Length = 224

 Score =  105 bits (263), Expect = 1e-29
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 10  ESIGEDGLLAVDCFTFSSSIADHL-SSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMD 68
           + +  +G L V  F FS+ +   +   + LVISHAG+GSI ++LRL KPLIV VN+ LMD
Sbjct: 106 QYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMD 165

Query: 69  NHQSELAEELADRKHLYCAHP--QSLHQVIVGMDLKSLLPYQPGDATPVAKLINRFL 123
           NHQ ++A++  +  +++   P    L   +     + L P+         +L+   +
Sbjct: 166 NHQQQIADKFVELGYVWSCAPTETGLIAGLRASQTEKLKPFPVSHNPSFERLLVETI 222

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415

 Score = 39.7 bits (93), Expect = 9e-05
 Identities = 12/29 (41%), Positives = 20/29 (68%)

Query: 33  LSSASLVISHAGSGSIFETLRLGKPLIVV 61
           L  A++ ++H G G++ E L  G+PL+VV
Sbjct: 311 LEQATVCVTHGGMGTLMEALYWGRPLVVV 339

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424

 Score = 39.7 bits (93), Expect = 9e-05
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 33  LSSASLVISHAGSGSIFETLRLGKPLIVV 61
           L+ AS  I+HAG GS  E L    P++ V
Sbjct: 319 LTKASAFITHAGMGSTMEALSNAVPMVAV 347

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 33  LSSASLVISHAGSGSIFETLRLGKPLIVV 61
           L  A L ++HAG+G   E L    P+I V
Sbjct: 297 LRQADLFVTHAGAGGSQEGLATATPMIAV 325

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 33  LSSASLVISHAGSGSIFETLRLGKPLIVV 61
           L+ A   ++H  +G++ E    G PL++V
Sbjct: 295 LAHARACLTHGTTGAVLEAFAAGVPLVLV 323

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 33  LSSASLVISHAGSGSIFETLRLGKPLIVV 61
           L    LV+ H GSG+    L  G P +  
Sbjct: 306 LPHVDLVVHHGGSGTTLGALGAGVPQLSF 334

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 441

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 7/29 (24%), Positives = 13/29 (44%)

Query: 33  LSSASLVISHAGSGSIFETLRLGKPLIVV 61
           L + +  + H G GS       G P +++
Sbjct: 333 LPTCAATVHHGGPGSWHTAAIHGVPQVIL 361

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384

 Score = 37.9 bits (88), Expect = 4e-04
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 33  LSSASLVISHAGSGSIFETLRLGKPLIVV 61
             +  L++ HAG  S    L  G P +++
Sbjct: 277 APTCDLLVHHAGGVSTLTGLSAGVPQLLI 305

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Length = 398

 Score = 37.4 bits (87), Expect = 6e-04
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 33  LSSASLVISHAGSGSIFETLRLGKPLIVV 61
           + +  +V+ H G G+    L  G P + V
Sbjct: 298 MPACDVVVHHGGHGTTLTCLSEGVPQVSV 326

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391

 Score = 37.1 bits (86), Expect = 7e-04
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 33  LSSASLVISHAGSGSIFETLRLGKPLIVV 61
           L +  LVI   GSG+ F   RLG P +V+
Sbjct: 284 LRTCELVICAGGSGTAFTATRLGIPQLVL 312

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398

 Score = 36.7 bits (85), Expect = 9e-04
 Identities = 7/29 (24%), Positives = 15/29 (51%)

Query: 33  LSSASLVISHAGSGSIFETLRLGKPLIVV 61
           L + + V+ H G G++   +  G P ++ 
Sbjct: 297 LRTCTAVVHHGGGGTVMTAIDAGIPQLLA 325

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	128
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	99.92
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.87
2o6l_A	170	UDP-glucuronosyltransferase 2B7; drug metabolism,	99.7
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	99.66
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	99.65
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	99.65
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	99.64
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	99.63
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	99.63
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	99.63
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	99.62
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	99.62
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	99.59
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	99.59
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	99.59
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	99.57
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	99.54
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.54
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	99.53
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	99.53
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	99.5
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	99.5
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	99.49
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	99.33
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	98.88
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	98.71
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	98.67
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	98.63
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	98.52
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	98.4
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	98.24
2xci_A	374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	98.11
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	98.08
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	97.93
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	97.89
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	97.88
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	97.87
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	97.76
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	97.75
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	97.56
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	97.36
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	97.25
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	97.1
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	97.05
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	97.01
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	96.96
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	96.92
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	96.87
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	96.87
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	96.57
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	95.64
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	95.07
1ydh_A	216	AT5G11950; structural genomics, protein structure	93.61
3ehd_A	162	Uncharacterized conserved protein; PSI,MCSG,PF0501	93.48
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	93.47
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	93.46
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	92.56
2gt1_A	326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	92.28
3tov_A	349	Glycosyl transferase family 9; structural genomics	91.24
1t35_A	191	Hypothetical protein YVDD, putative lysine decarbo	91.15
1rcu_A	195	Conserved hypothetical protein VT76; structural ge	91.07
3sbx_A	189	Putative uncharacterized protein; structural genom	90.48
2a33_A	215	Hypothetical protein; structural genomics, protein	90.35
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	90.26
2iz6_A	176	Molybdenum cofactor carrier protein; metal transpo	90.22
3qua_A	199	Putative uncharacterized protein; structural genom	89.7
1s2d_A	167	Purine trans deoxyribosylase; ribosylate intermedi	89.15
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	88.99
2q5c_A	196	NTRC family transcriptional regulator; structural	87.65
1eiw_A	111	Hypothetical protein MTH538; CHEY-like fold, flavo	86.73
2khz_A	165	C-MYC-responsive protein RCL; flexible loop, nucle	86.45
1wek_A	217	Hypothetical protein TT1465; rossman fold, structu	85.87
4fyk_A	152	Deoxyribonucleoside 5'-monophosphate N-glycosidas;	85.6
3zqu_A	209	Probable aromatic acid decarboxylase; lyase; HET:	85.25
2pju_A	225	Propionate catabolism operon regulatory protein; s	84.09
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	84.03
2f62_A	161	Nucleoside 2-deoxyribosyltransferase; SGPP, struct	83.52
1uqt_A	482	Alpha, alpha-trehalose-phosphate synthase; glycosy	82.9
2an1_A	292	Putative kinase; structural genomics, PSI, protein	80.17

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A

Probab=99.92  E-value=3e-25  Score=165.49  Aligned_cols=108  Identities=33%  Similarity=0.530  Sum_probs=99.5

Q ss_pred             cccEEEEeChhhHHHHHh-hccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChHHHHHH
Q 033065           17 LLAVDCFTFSSSIADHLS-SASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQV   95 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~-~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~~~~~l~~~   95 (128)
                      +.++++++|+++|.++|+ +||+||||||+||++|++++|+|+|+||++..+++||..||+++++.|++++++++.|.++
T Consensus       113 ~~~v~v~~f~~~m~~~l~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~~~~~L~~~  192 (224)
T 2jzc_A          113 KLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCAPTETGLI  192 (224)
T ss_dssp             SSEEEECCSSSSHHHHHHHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEECSCTTTHH
T ss_pred             CceEEEeeccchHHHHHHhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEcCHHHHHHH
Confidence            457889999999999999 9999999999999999999999999999988788999999999999999987899999999


Q ss_pred             HHhc--chhcCCCCCCCChHHHHHHHHHhcC
Q 033065           96 IVGM--DLKSLLPYQPGDATPVAKLINRFLG  124 (128)
Q Consensus        96 i~~l--~~~~~~~~~~~~~~~i~~~i~~~~g  124 (128)
                      |.++  ...++++|++.+...+.+.|.+++|
T Consensus       193 i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  223 (224)
T 2jzc_A          193 AGLRASQTEKLKPFPVSHNPSFERLLVETIY  223 (224)
T ss_dssp             HHHHHHTTCCCCSCCCSSSCTHHHHHHHHCC
T ss_pred             HHHHHhhhhccCCCCCCCHHHHHHHHHHHhc
Confidence            9998  4467888988778899999999886

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=99.87  E-value=6.4e-22  Score=155.10  Aligned_cols=108  Identities=21%  Similarity=0.175  Sum_probs=90.7

Q ss_pred             CcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChH
Q 033065           16 GLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQ   90 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~   90 (128)
                      .+.++++++|+++|.++|++||++|||+|++|++|++++|+|+|++|.+...++||..||+++++.|+++++     +++
T Consensus       233 ~~~~~~v~~f~~dm~~~l~~aDlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~  312 (365)
T 3s2u_A          233 VAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAA  312 (365)
T ss_dssp             TTCCCEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHH
T ss_pred             cccccccccchhhhhhhhccceEEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHH
Confidence            456889999999999999999999999999999999999999999999988889999999999999999875     678


Q ss_pred             HHHHHHHhcch----------hcCCCCCCCChHHHHHHHHHhc
Q 033065           91 SLHQVIVGMDL----------KSLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        91 ~l~~~i~~l~~----------~~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      .|.++|.+++.          +.++...++++++|++.|.+..
T Consensus       313 ~L~~~i~~ll~d~~~~~~m~~~a~~~~~~~aa~~ia~~i~~la  355 (365)
T 3s2u_A          313 ELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVA  355 (365)
T ss_dssp             HHHHHHHHHHHCTHHHHHHHHHHHHTCCTTHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence            89999988853          1233456678999999998874

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}

Probab=99.70  E-value=7.6e-17  Score=112.98  Aligned_cols=80  Identities=16%  Similarity=0.231  Sum_probs=72.8

Q ss_pred             cccEEEEeChhhHHHHH--hhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----Ch
Q 033065           17 LLAVDCFTFSSSIADHL--SSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HP   89 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~--~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~   89 (128)
                      ..++++.+|+++ .++|  +.||++|||+|.+|++|++++|+|+|++|..    +||..||+.+++.|.++.+     ++
T Consensus        67 ~~~v~~~~~~~~-~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~----~~Q~~na~~l~~~g~g~~~~~~~~~~  141 (170)
T 2o6l_A           67 GLNTRLYKWIPQ-NDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLF----ADQPDNIAHMKARGAAVRVDFNTMSS  141 (170)
T ss_dssp             CTTEEEESSCCH-HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHTTTSEEECCTTTCCH
T ss_pred             CCcEEEecCCCH-HHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccch----hhHHHHHHHHHHcCCeEEeccccCCH
Confidence            458999999997 6888  9999999999999999999999999999986    7899999999999999875     67


Q ss_pred             HHHHHHHHhcch
Q 033065           90 QSLHQVIVGMDL  101 (128)
Q Consensus        90 ~~l~~~i~~l~~  101 (128)
                      +.|.++|.+++.
T Consensus       142 ~~l~~~i~~ll~  153 (170)
T 2o6l_A          142 TDLLNALKRVIN  153 (170)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc
Confidence            899999998874

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=99.66  E-value=1.4e-16  Score=123.66  Aligned_cols=104  Identities=15%  Similarity=0.115  Sum_probs=78.2

Q ss_pred             CcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeC-hHHHHH
Q 033065           16 GLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAH-PQSLHQ   94 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~~-~~~l~~   94 (128)
                      ...|+.+.+|+| +.++|+.||++|||||.||++|++++|+|+|++|..    .||..||+++++.|+++.++ .+.+.+
T Consensus       286 ~~~~v~~~~~~p-~~~lL~~~~~~v~h~G~~s~~Eal~~GvP~v~~P~~----~dQ~~na~~v~~~G~g~~l~~~~~~~~  360 (400)
T 4amg_A          286 LPANVRVVEWIP-LGALLETCDAIIHHGGSGTLLTALAAGVPQCVIPHG----SYQDTNRDVLTGLGIGFDAEAGSLGAE  360 (400)
T ss_dssp             CCTTEEEECCCC-HHHHHTTCSEEEECCCHHHHHHHHHHTCCEEECCC-------CHHHHHHHHHHTSEEECCTTTCSHH
T ss_pred             CCCCEEEEeecC-HHHHhhhhhheeccCCccHHHHHHHhCCCEEEecCc----ccHHHHHHHHHHCCCEEEcCCCCchHH
Confidence            456899999998 489999999999999999999999999999999986    78999999999999998763 333455


Q ss_pred             HHHhcchh----------cCCCCCCCChHHHHHHHHHhcC
Q 033065           95 VIVGMDLK----------SLLPYQPGDATPVAKLINRFLG  124 (128)
Q Consensus        95 ~i~~l~~~----------~~~~~~~~~~~~i~~~i~~~~g  124 (128)
                      +|++++++          ........++..+++.|.++.|
T Consensus       361 al~~lL~d~~~r~~a~~l~~~~~~~~~~~~~a~~le~lAG  400 (400)
T 4amg_A          361 QCRRLLDDAGLREAALRVRQEMSEMPPPAETAAXLVALAG  400 (400)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhC
Confidence            55555431          0001112367788888887765

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=99.65  E-value=3.8e-16  Score=123.90  Aligned_cols=102  Identities=13%  Similarity=0.102  Sum_probs=85.2

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~   91 (128)
                      ..++++.+|+++ .++|++||++|||||++|++|++++|+|+|++|..    +||..||+++++.|.++.+     +++.
T Consensus       318 ~~~v~~~~~~~~-~~ll~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~----~dQ~~na~~l~~~g~g~~~~~~~~~~~~  392 (441)
T 2yjn_A          318 PDNVRTVGFVPM-HALLPTCAATVHHGGPGSWHTAAIHGVPQVILPDG----WDTGVRAQRTQEFGAGIALPVPELTPDQ  392 (441)
T ss_dssp             CSSEEECCSCCH-HHHGGGCSEEEECCCHHHHHHHHHTTCCEEECCCS----HHHHHHHHHHHHHTSEEECCTTTCCHHH
T ss_pred             CCCEEEecCCCH-HHHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCCc----ccHHHHHHHHHHcCCEEEcccccCCHHH
Confidence            458999999997 79999999999999999999999999999999985    7999999999999999774     6789


Q ss_pred             HHHHHHhcchh----------cCCCCCCCChHHHHHHHHHhc
Q 033065           92 LHQVIVGMDLK----------SLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        92 l~~~i~~l~~~----------~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      |.++|.+++.+          ..+.....+++.+++.|.+++
T Consensus       393 l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  434 (441)
T 2yjn_A          393 LRESVKRVLDDPAHRAGAARMRDDMLAEPSPAEVVGICEELA  434 (441)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            99999888531          011123457888888887754

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=99.65  E-value=1.1e-15  Score=120.54  Aligned_cols=102  Identities=19%  Similarity=0.122  Sum_probs=85.9

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~   91 (128)
                      ..|+++.+|++. .++|+.||++|||||+||++|++++|+|+|++|..    +||..||+++++.|+++.+     +++.
T Consensus       267 ~~~v~~~~~~~~-~~ll~~~d~~v~~gG~~t~~Eal~~GvP~v~~p~~----~dQ~~na~~~~~~G~g~~l~~~~~~~~~  341 (404)
T 3h4t_A          267 GDDCLVVGEVNH-QVLFGRVAAVVHHGGAGTTTAVTRAGAPQVVVPQK----ADQPYYAGRVADLGVGVAHDGPTPTVES  341 (404)
T ss_dssp             CTTEEEESSCCH-HHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHHTSEEECSSSSCCHHH
T ss_pred             CCCEEEecCCCH-HHHHhhCcEEEECCcHHHHHHHHHcCCCEEEcCCc----ccHHHHHHHHHHCCCEeccCcCCCCHHH
Confidence            568999999986 89999999999999999999999999999999985    7899999999999999874     6889


Q ss_pred             HHHHHHhcchh--------cCCCCCCCChHHHHHHHHHhc
Q 033065           92 LHQVIVGMDLK--------SLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        92 l~~~i~~l~~~--------~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      |.++|.+++..        ..+....++++.+++.|.+.+
T Consensus       342 l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  381 (404)
T 3h4t_A          342 LSAALATALTPGIRARAAAVAGTIRTDGTTVAAKLLLEAI  381 (404)
T ss_dssp             HHHHHHHHTSHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            99999888631        111222267788888888765

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=99.64  E-value=5.7e-16  Score=121.91  Aligned_cols=102  Identities=23%  Similarity=0.302  Sum_probs=84.0

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~   91 (128)
                      ..++++.+|++++ ++|+.||++|||||++|++|++++|+|+|++|..    .||..||+++++.|+++.+     ++++
T Consensus       304 ~~~v~~~~~~~~~-~~l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~----~dQ~~na~~l~~~g~g~~~~~~~~~~~~  378 (424)
T 2iya_A          304 PPNVEVHQWVPQL-DILTKASAFITHAGMGSTMEALSNAVPMVAVPQI----AEQTMNAERIVELGLGRHIPRDQVTAEK  378 (424)
T ss_dssp             CTTEEEESSCCHH-HHHTTCSEEEECCCHHHHHHHHHTTCCEEECCCS----HHHHHHHHHHHHTTSEEECCGGGCCHHH
T ss_pred             CCCeEEecCCCHH-HHHhhCCEEEECCchhHHHHHHHcCCCEEEecCc----cchHHHHHHHHHCCCEEEcCcCCCCHHH
Confidence            4589999999997 8999999999999999999999999999999985    6899999999999999774     6789


Q ss_pred             HHHHHHhcchhc----------CCCCCCCChHHHHHHHHHhc
Q 033065           92 LHQVIVGMDLKS----------LLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        92 l~~~i~~l~~~~----------~~~~~~~~~~~i~~~i~~~~  123 (128)
                      |.++|++++.+.          .+....++++.+++.|.+++
T Consensus       379 l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  420 (424)
T 2iya_A          379 LREAVLAVASDPGVAERLAAVRQEIREAGGARAAADILEGIL  420 (424)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence            999998886321          00112356677777776653

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.63  E-value=1.7e-15  Score=119.24  Aligned_cols=100  Identities=18%  Similarity=0.158  Sum_probs=82.3

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~   91 (128)
                      ..++++.+|++ +.++|++||++|||||++|++|++++|+|+|++|..    +||..||+++++.|+++.+     +++.
T Consensus       285 ~~~v~~~~~~~-~~~ll~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~----~dQ~~na~~l~~~g~g~~~~~~~~~~~~  359 (416)
T 1rrv_A          285 RDDCFAIDEVN-FQALFRRVAAVIHHGSAGTEHVATRAGVPQLVIPRN----TDQPYFAGRVAALGIGVAHDGPTPTFES  359 (416)
T ss_dssp             CTTEEEESSCC-HHHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCS----BTHHHHHHHHHHHTSEEECSSSCCCHHH
T ss_pred             CCCEEEeccCC-hHHHhccCCEEEecCChhHHHHHHHcCCCEEEccCC----CCcHHHHHHHHHCCCccCCCCCCCCHHH
Confidence            45789999998 589999999999999999999999999999999985    7899999999999999764     6789


Q ss_pred             HHHHHHhcchh----------cCCCCCCCChHHHHHHH-HHhc
Q 033065           92 LHQVIVGMDLK----------SLLPYQPGDATPVAKLI-NRFL  123 (128)
Q Consensus        92 l~~~i~~l~~~----------~~~~~~~~~~~~i~~~i-~~~~  123 (128)
                      |.++|+++ .+          ..+....+++ .+++.| .+.+
T Consensus       360 l~~~i~~l-~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~e~~~  400 (416)
T 1rrv_A          360 LSAALTTV-LAPETRARAEAVAGMVLTDGAA-AAADLVLAAVG  400 (416)
T ss_dssp             HHHHHHHH-TSHHHHHHHHHHTTTCCCCHHH-HHHHHHHHHHH
T ss_pred             HHHHHHHh-hCHHHHHHHHHHHHHHhhcCcH-HHHHHHHHHHh
Confidence            99999888 31          1122233455 777777 6654

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=99.63  E-value=7.4e-16  Score=118.02  Aligned_cols=65  Identities=18%  Similarity=0.109  Sum_probs=61.2

Q ss_pred             ccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe
Q 033065           18 LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA   87 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~   87 (128)
                      .++++++|+++|.++|++||++||+|| +|++|++++|+|+|++|..    +||..||+++++.|+++++
T Consensus       208 ~~v~v~~~~~~m~~~m~~aDlvI~~gG-~T~~E~~~~g~P~i~ip~~----~~Q~~nA~~l~~~G~~~~~  272 (282)
T 3hbm_A          208 NNIRLFIDHENIAKLMNESNKLIISAS-SLVNEALLLKANFKAICYV----KNQESTATWLAKKGYEVEY  272 (282)
T ss_dssp             SSEEEEESCSCHHHHHHTEEEEEEESS-HHHHHHHHTTCCEEEECCS----GGGHHHHHHHHHTTCEEEC
T ss_pred             CCEEEEeCHHHHHHHHHHCCEEEECCc-HHHHHHHHcCCCEEEEeCC----CCHHHHHHHHHHCCCEEEc
Confidence            489999999999999999999999998 7999999999999999974    7899999999999999775

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=99.63  E-value=5.2e-16  Score=121.34  Aligned_cols=103  Identities=18%  Similarity=0.281  Sum_probs=84.3

Q ss_pred             CcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChH
Q 033065           16 GLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQ   90 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~   90 (128)
                      ...++++.+|++++ ++|+.||++|||+|++|++|++++|+|+|++|..    .+|..||+.+++.|+++.+     +++
T Consensus       295 ~~~~v~~~~~~~~~-~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~----~~q~~~a~~l~~~g~g~~~~~~~~~~~  369 (415)
T 3rsc_A          295 LPPNVEAHRWVPHV-KVLEQATVCVTHGGMGTLMEALYWGRPLVVVPQS----FDVQPMARRVDQLGLGAVLPGEKADGD  369 (415)
T ss_dssp             CCTTEEEESCCCHH-HHHHHEEEEEESCCHHHHHHHHHTTCCEEECCCS----GGGHHHHHHHHHHTCEEECCGGGCCHH
T ss_pred             CCCcEEEEecCCHH-HHHhhCCEEEECCcHHHHHHHHHhCCCEEEeCCc----chHHHHHHHHHHcCCEEEcccCCCCHH
Confidence            34689999999987 9999999999999999999999999999999985    7899999999999999775     678


Q ss_pred             HHHHHHHhcchhc----------CCCCCCCChHHHHHHHHHhc
Q 033065           91 SLHQVIVGMDLKS----------LLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        91 ~l~~~i~~l~~~~----------~~~~~~~~~~~i~~~i~~~~  123 (128)
                      .|.++|.+++.+.          .......+++.+++.|.+++
T Consensus       370 ~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  412 (415)
T 3rsc_A          370 TLLAAVGAVAADPALLARVEAMRGHVRRAGGAARAADAVEAYL  412 (415)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence            9999998886420          00112346677777776654

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=99.62  E-value=1e-15  Score=118.52  Aligned_cols=103  Identities=17%  Similarity=0.256  Sum_probs=84.8

Q ss_pred             CcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeC-CCCCCchHHHHHHHHHhCCCEEEe-----Ch
Q 033065           16 GLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVN-EDLMDNHQSELAEELADRKHLYCA-----HP   89 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~-~~~~~~~Q~~nA~~l~~~g~~~~~-----~~   89 (128)
                      ...++++.+|++++ ++|+.||++|||+|++|++|++++|+|+|++|. .    .+|..||+.+++.|.++.+     ++
T Consensus       279 ~~~~v~~~~~~~~~-~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~----~~q~~~a~~~~~~g~g~~~~~~~~~~  353 (402)
T 3ia7_A          279 LPPNVEAHQWIPFH-SVLAHARACLTHGTTGAVLEAFAAGVPLVLVPHFA----TEAAPSAERVIELGLGSVLRPDQLEP  353 (402)
T ss_dssp             CCTTEEEESCCCHH-HHHTTEEEEEECCCHHHHHHHHHTTCCEEECGGGC----GGGHHHHHHHHHTTSEEECCGGGCSH
T ss_pred             CCCcEEEecCCCHH-HHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCCCc----ccHHHHHHHHHHcCCEEEccCCCCCH
Confidence            34689999999997 999999999999999999999999999999998 5    6899999999999999775     67


Q ss_pred             HHHHHHHHhcchhc----------CCCCCCCChHHHHHHHHHhc
Q 033065           90 QSLHQVIVGMDLKS----------LLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        90 ~~l~~~i~~l~~~~----------~~~~~~~~~~~i~~~i~~~~  123 (128)
                      +.|.+++.+++.+.          .+.....+++.+++.|.+++
T Consensus       354 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  397 (402)
T 3ia7_A          354 ASIREAVERLAADSAVRERVRRMQRDILSSGGPARAADEVEAYL  397 (402)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHhhCChHHHHHHHHHHHH
Confidence            88999998886421          01112346677777777654

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.62  E-value=1.3e-15  Score=120.01  Aligned_cols=102  Identities=18%  Similarity=0.126  Sum_probs=84.7

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~   91 (128)
                      ..++++.+|+++ .++|++||++|||||++|++|++++|+|+|++|..    +||..||+++++.|+++.+     ++++
T Consensus       284 ~~~v~~~~~~~~-~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~----~dQ~~na~~l~~~g~g~~~~~~~~~~~~  358 (415)
T 1iir_A          284 GADCFAIGEVNH-QVLFGRVAAVIHHGGAGTTHVAARAGAPQILLPQM----ADQPYYAGRVAELGVGVAHDGPIPTFDS  358 (415)
T ss_dssp             GGGEEECSSCCH-HHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHHTSEEECSSSSCCHHH
T ss_pred             CCCEEEeCcCCh-HHHHhhCCEEEeCCChhHHHHHHHcCCCEEECCCC----CccHHHHHHHHHCCCcccCCcCCCCHHH
Confidence            458999999997 57899999999999999999999999999999985    6899999999999999774     6889


Q ss_pred             HHHHHHhcchh----------cCCCCCCCChHHHHHHHHHhcC
Q 033065           92 LHQVIVGMDLK----------SLLPYQPGDATPVAKLINRFLG  124 (128)
Q Consensus        92 l~~~i~~l~~~----------~~~~~~~~~~~~i~~~i~~~~g  124 (128)
                      |.++|.++ .+          ..+....++++.+++.|.+.+.
T Consensus       359 l~~~i~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  400 (415)
T 1iir_A          359 LSAALATA-LTPETHARATAVAGTIRTDGAAVAARLLLDAVSR  400 (415)
T ss_dssp             HHHHHHHH-TSHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHH-cCHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHh
Confidence            99999888 31          0111234567788888877654

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=99.59  E-value=1.2e-15  Score=123.06  Aligned_cols=79  Identities=15%  Similarity=0.089  Sum_probs=71.3

Q ss_pred             ccEEEEeChhhHHHHHh--hccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEEEe-----Ch
Q 033065           18 LAVDCFTFSSSIADHLS--SASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR-KHLYCA-----HP   89 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~--~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~-g~~~~~-----~~   89 (128)
                      .++.+.+|.+++ ++|+  ++|++|||||+||++|++++|+|+|++|..    .||..||+++++. |+++.+     +.
T Consensus       325 ~~~~v~~w~pq~-~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~----~dQ~~Na~~l~~~~g~g~~l~~~~~~~  399 (456)
T 2c1x_A          325 GYGMVVPWAPQA-EVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFF----GDQRLNGRMVEDVLEIGVRIEGGVFTK  399 (456)
T ss_dssp             TTEEEESCCCHH-HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHTSCCEEECGGGSCCH
T ss_pred             CceEEecCCCHH-HHhcCCcCCEEEecCCcchHHHHHHhCceEEecCCh----hhHHHHHHHHHHHhCeEEEecCCCcCH
Confidence            478999999996 7788  889999999999999999999999999986    7899999999999 999874     68


Q ss_pred             HHHHHHHHhcch
Q 033065           90 QSLHQVIVGMDL  101 (128)
Q Consensus        90 ~~l~~~i~~l~~  101 (128)
                      ++|.++|++++.
T Consensus       400 ~~l~~~i~~ll~  411 (456)
T 2c1x_A          400 SGLMSCFDQILS  411 (456)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHC
Confidence            899999988864

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=99.59  E-value=3e-15  Score=116.06  Aligned_cols=100  Identities=14%  Similarity=0.151  Sum_probs=82.6

Q ss_pred             ccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHHH
Q 033065           18 LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQSL   92 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~l   92 (128)
                      .++.+ +|++ +.++|+.||++|||||.+|++|++++|+|+|++|..    ++|..||+++++.|.++.+     +++.|
T Consensus       264 ~~v~~-~~~~-~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~----~dq~~~a~~~~~~g~g~~~~~~~~~~~~l  337 (384)
T 2p6p_A          264 PQARV-GWTP-LDVVAPTCDLLVHHAGGVSTLTGLSAGVPQLLIPKG----SVLEAPARRVADYGAAIALLPGEDSTEAI  337 (384)
T ss_dssp             TTSEE-ECCC-HHHHGGGCSEEEECSCTTHHHHHHHTTCCEEECCCS----HHHHHHHHHHHHHTSEEECCTTCCCHHHH
T ss_pred             CceEE-cCCC-HHHHHhhCCEEEeCCcHHHHHHHHHhCCCEEEccCc----ccchHHHHHHHHCCCeEecCcCCCCHHHH
Confidence            47888 9997 589999999999999999999999999999999984    7999999999999999764     67899


Q ss_pred             HHHHHhcchh----------cCCCCCCCChHHHHHHHHHhc
Q 033065           93 HQVIVGMDLK----------SLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        93 ~~~i~~l~~~----------~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      .++|.+++.+          ..+.....+++.+++.|.+++
T Consensus       338 ~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  378 (384)
T 2p6p_A          338 ADSCQELQAKDTYARRAQDLSREISGMPLPATVVTALEQLA  378 (384)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence            9999888641          011122357888888887765

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=99.59  E-value=3.7e-15  Score=116.23  Aligned_cols=81  Identities=15%  Similarity=0.062  Sum_probs=71.0

Q ss_pred             CcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChH
Q 033065           16 GLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQ   90 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~   90 (128)
                      ...++++.+|++ +.++|+.||++|||+|++|++|++++|+|+|++|..    .+|..||+.+++.|.++.+     +++
T Consensus       282 ~~~~v~~~~~~~-~~~ll~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~----~~q~~~a~~~~~~g~g~~~~~~~~~~~  356 (398)
T 4fzr_A          282 LPEGVLAAGQFP-LSAIMPACDVVVHHGGHGTTLTCLSEGVPQVSVPVI----AEVWDSARLLHAAGAGVEVPWEQAGVE  356 (398)
T ss_dssp             CCTTEEEESCCC-HHHHGGGCSEEEECCCHHHHHHHHHTTCCEEECCCS----GGGHHHHHHHHHTTSEEECC-------
T ss_pred             CCCcEEEeCcCC-HHHHHhhCCEEEecCCHHHHHHHHHhCCCEEecCCc----hhHHHHHHHHHHcCCEEecCcccCCHH
Confidence            346899999996 799999999999999999999999999999999985    7899999999999999775     577


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      .|.++|.+++.
T Consensus       357 ~l~~ai~~ll~  367 (398)
T 4fzr_A          357 SVLAACARIRD  367 (398)
T ss_dssp             CHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            89999988864

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=99.57  E-value=6.9e-15  Score=118.88  Aligned_cols=79  Identities=13%  Similarity=0.032  Sum_probs=69.6

Q ss_pred             ccEEEEeChhhHHHHHhh--ccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHH-hCCCEEEe----ChH
Q 033065           18 LAVDCFTFSSSIADHLSS--ASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELA-DRKHLYCA----HPQ   90 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~--adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~-~~g~~~~~----~~~   90 (128)
                      .|+.+.+|++++ ++|+.  ++++|||||+||++|++++|+|+|++|..    .||..||++++ +.|+++.+    +++
T Consensus       353 ~~~~v~~~~pq~-~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~----~dQ~~na~~~~~~~G~g~~l~~~~~~~  427 (482)
T 2pq6_A          353 DRGLIASWCPQD-KVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFF----ADQPTDCRFICNEWEIGMEIDTNVKRE  427 (482)
T ss_dssp             TTEEEESCCCHH-HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHTSCCEEECCSSCCHH
T ss_pred             CCEEEEeecCHH-HHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcc----cchHHHHHHHHHHhCEEEEECCCCCHH
Confidence            478999999996 68855  55699999999999999999999999996    68999999997 78999874    788


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      +|.++|++++.
T Consensus       428 ~l~~~i~~ll~  438 (482)
T 2pq6_A          428 ELAKLINEVIA  438 (482)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHHc
Confidence            99999988864

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=99.54  E-value=1.9e-14  Score=116.05  Aligned_cols=79  Identities=15%  Similarity=0.114  Sum_probs=69.2

Q ss_pred             ccEEEEeChhhHHHHHh--hccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHH-HhCCCEEEe-------
Q 033065           18 LAVDCFTFSSSIADHLS--SASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEEL-ADRKHLYCA-------   87 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~--~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l-~~~g~~~~~-------   87 (128)
                      .++.+.+|.+++ ++|+  ++|++|||||+||++|++++|+|+|++|..    .||..||+++ ++.|+++.+       
T Consensus       332 ~~~~v~~w~pq~-~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~----~dQ~~Na~~lv~~~g~g~~l~~~~~~~  406 (463)
T 2acv_A          332 GKGMICGWAPQV-EVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIY----AEQQLNAFRLVKEWGVGLGLRVDYRKG  406 (463)
T ss_dssp             CSEEEESSCCHH-HHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCS----TTHHHHHHHHHHTSCCEEESCSSCCTT
T ss_pred             CCEEEEccCCHH-HHhCCCccCeEEecCCchhHHHHHHcCCCeeeccch----hhhHHHHHHHHHHcCeEEEEecccCCC
Confidence            477899999997 5664  799999999999999999999999999985    7899999996 799999755       


Q ss_pred             ----ChHHHHHHHHhcch
Q 033065           88 ----HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ----~~~~l~~~i~~l~~  101 (128)
                          +.++|.++|+++++
T Consensus       407 ~~~~~~~~l~~ai~~ll~  424 (463)
T 2acv_A          407 SDVVAAEEIEKGLKDLMD  424 (463)
T ss_dssp             CCCCCHHHHHHHHHHHTC
T ss_pred             CccccHHHHHHHHHHHHh
Confidence                56889999998874

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.54  E-value=1.5e-14  Score=112.19  Aligned_cols=102  Identities=19%  Similarity=0.148  Sum_probs=83.1

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeC-------h
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAH-------P   89 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~~-------~   89 (128)
                      ..++++.+|++. .++|+.||++|||||.+|++|++++|+|+|++|..    .+|..|++.+++.|.++.+.       +
T Consensus       269 ~~~v~~~~~~~~-~~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~----~~q~~~a~~~~~~g~g~~~~~~~~~~~~  343 (391)
T 3tsa_A          269 PDNARIAESVPL-NLFLRTCELVICAGGSGTAFTATRLGIPQLVLPQY----FDQFDYARNLAAAGAGICLPDEQAQSDH  343 (391)
T ss_dssp             CTTEEECCSCCG-GGTGGGCSEEEECCCHHHHHHHHHTTCCEEECCCS----TTHHHHHHHHHHTTSEEECCSHHHHTCH
T ss_pred             CCCEEEeccCCH-HHHHhhCCEEEeCCCHHHHHHHHHhCCCEEecCCc----ccHHHHHHHHHHcCCEEecCcccccCCH
Confidence            458999999975 68899999999999999999999999999999985    68999999999999997753       6


Q ss_pred             HHHHHHHHhcchhc----------CCCCCCCChHHHHHHHHHhc
Q 033065           90 QSLHQVIVGMDLKS----------LLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        90 ~~l~~~i~~l~~~~----------~~~~~~~~~~~i~~~i~~~~  123 (128)
                      +.|.+++.+++.+.          .+.....+++.+++.|.+++
T Consensus       344 ~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  387 (391)
T 3tsa_A          344 EQFTDSIATVLGDTGFAAAAIKLSDEITAMPHPAALVRTLENTA  387 (391)
T ss_dssp             HHHHHHHHHHHTCTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            78999998886421          11123356788888887765

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=99.53  E-value=8.3e-15  Score=118.56  Aligned_cols=79  Identities=14%  Similarity=0.088  Sum_probs=71.6

Q ss_pred             ccEEEEeChhhHHHHHhhcc--EEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEEEe-----Ch
Q 033065           18 LAVDCFTFSSSIADHLSSAS--LVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR-KHLYCA-----HP   89 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~ad--lvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~-g~~~~~-----~~   89 (128)
                      .++.+.+|.++ .++++.++  ++|||||+||++|++++|+|+|++|..    .||..||+++++. |+++.+     +.
T Consensus       327 ~~~~vv~w~Pq-~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~----~DQ~~Na~~v~~~~g~Gv~l~~~~~~~  401 (454)
T 3hbf_A          327 TKGKIVAWAPQ-VEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFF----GDQGLNTILTESVLEIGVGVDNGVLTK  401 (454)
T ss_dssp             TTEEEESSCCH-HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHTTSCSEEECGGGSCCH
T ss_pred             CceEEEeeCCH-HHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCccc----ccHHHHHHHHHHhhCeeEEecCCCCCH
Confidence            47889999998 59999999  999999999999999999999999985    6899999999995 999864     78


Q ss_pred             HHHHHHHHhcch
Q 033065           90 QSLHQVIVGMDL  101 (128)
Q Consensus        90 ~~l~~~i~~l~~  101 (128)
                      ++|.++|++++.
T Consensus       402 ~~l~~av~~ll~  413 (454)
T 3hbf_A          402 ESIKKALELTMS  413 (454)
T ss_dssp             HHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHC
Confidence            899999998874

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=99.53  E-value=2.1e-14  Score=111.75  Aligned_cols=102  Identities=19%  Similarity=0.160  Sum_probs=84.3

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~   91 (128)
                      ..++++.+|+ ++.++|+.||++|+|+|.+|++|++++|+|+|++|..    .+|..|++.+++.|.++.+     +++.
T Consensus       291 ~~~v~~~~~~-~~~~~l~~ad~~v~~~g~~t~~Ea~a~G~P~v~~p~~----~~q~~~~~~v~~~g~g~~~~~~~~~~~~  365 (412)
T 3otg_A          291 PANVRLESWV-PQAALLPHVDLVVHHGGSGTTLGALGAGVPQLSFPWA----GDSFANAQAVAQAGAGDHLLPDNISPDS  365 (412)
T ss_dssp             CTTEEEESCC-CHHHHGGGCSEEEESCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHHTSEEECCGGGCCHHH
T ss_pred             CCcEEEeCCC-CHHHHHhcCcEEEECCchHHHHHHHHhCCCEEecCCc----hhHHHHHHHHHHcCCEEecCcccCCHHH
Confidence            4589999999 5999999999999999999999999999999999986    6899999999999999775     6789


Q ss_pred             HHHHHHhcchhc----------CCCCCCCChHHHHHHHHHhc
Q 033065           92 LHQVIVGMDLKS----------LLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        92 l~~~i~~l~~~~----------~~~~~~~~~~~i~~~i~~~~  123 (128)
                      |.++|.+++.+.          .+.....+.+.+++.|.+++
T Consensus       366 l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  407 (412)
T 3otg_A          366 VSGAAKRLLAEESYRAGARAVAAEIAAMPGPDEVVRLLPGFA  407 (412)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHH
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence            999998886420          11112346777887777665

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=99.50  E-value=7.6e-14  Score=109.61  Aligned_cols=102  Identities=23%  Similarity=0.207  Sum_probs=82.9

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChHH
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQS   91 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~~   91 (128)
                      ..++++.+|++++ ++|+.||++|+|+|.+|++|++++|+|+|++|..    ++|..||+.+++.|.++.+     +++.
T Consensus       282 ~~~v~~~~~~~~~-~~l~~ad~~v~~~G~~t~~Ea~~~G~P~i~~p~~----~~q~~~a~~~~~~g~g~~~~~~~~~~~~  356 (430)
T 2iyf_A          282 PDNVEVHDWVPQL-AILRQADLFVTHAGAGGSQEGLATATPMIAVPQA----VDQFGNADMLQGLGVARKLATEEATADL  356 (430)
T ss_dssp             CTTEEEESSCCHH-HHHTTCSEEEECCCHHHHHHHHHTTCCEEECCCS----HHHHHHHHHHHHTTSEEECCCC-CCHHH
T ss_pred             CCCeEEEecCCHH-HHhhccCEEEECCCccHHHHHHHhCCCEEECCCc----cchHHHHHHHHHcCCEEEcCCCCCCHHH
Confidence            4589999999997 8999999999999999999999999999999985    7999999999999999764     6789


Q ss_pred             HHHHHHhcchhc----------CCCCCCCChHHHHHHHHHhc
Q 033065           92 LHQVIVGMDLKS----------LLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        92 l~~~i~~l~~~~----------~~~~~~~~~~~i~~~i~~~~  123 (128)
                      |.++|.+++.+.          .+.....+.+.+++.|.+++
T Consensus       357 l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  398 (430)
T 2iyf_A          357 LRETALALVDDPEVARRLRRIQAEMAQEGGTRRAADLIEAEL  398 (430)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHcCHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHh
Confidence            999998886421          00011245667777776654

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=99.50  E-value=2.5e-14  Score=111.62  Aligned_cols=103  Identities=14%  Similarity=0.166  Sum_probs=78.4

Q ss_pred             CcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHH--HHHHhCCCEEEe-----C
Q 033065           16 GLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELA--EELADRKHLYCA-----H   88 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA--~~l~~~g~~~~~-----~   88 (128)
                      ...|+++.+|+ ++.++|+.||++|||+|++|++|++++|+|+|++|..    .+|..||  +.+++.|.++.+     +
T Consensus       281 ~~~~v~~~~~~-~~~~ll~~ad~~v~~~G~~t~~Eal~~G~P~v~~p~~----~dq~~~a~~~~~~~~g~g~~~~~~~~~  355 (398)
T 3oti_A          281 LPRNVRAVGWT-PLHTLLRTCTAVVHHGGGGTVMTAIDAGIPQLLAPDP----RDQFQHTAREAVSRRGIGLVSTSDKVD  355 (398)
T ss_dssp             CCTTEEEESSC-CHHHHHTTCSEEEECCCHHHHHHHHHHTCCEEECCCT----TCCSSCTTHHHHHHHTSEEECCGGGCC
T ss_pred             CCCcEEEEccC-CHHHHHhhCCEEEECCCHHHHHHHHHhCCCEEEcCCC----chhHHHHHHHHHHHCCCEEeeCCCCCC
Confidence            34689999999 5899999999999999999999999999999999985    6899999  999999999876     3


Q ss_pred             hHHHHHHHHhc------chhcCCCCCCCChHHHHHHHHHhc
Q 033065           89 PQSLHQVIVGM------DLKSLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        89 ~~~l~~~i~~l------~~~~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      ++.|.+.+..-      .+...+.....+++.+++.|.+++
T Consensus       356 ~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  396 (398)
T 3oti_A          356 ADLLRRLIGDESLRTAAREVREEMVALPTPAETVRRIVERI  396 (398)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence            44454322110      001111123357788888887764

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=99.49  E-value=2.9e-14  Score=115.53  Aligned_cols=77  Identities=21%  Similarity=0.179  Sum_probs=67.7

Q ss_pred             EEEEeChhhHHHHHhhcc--EEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHH-HhCCCEEEe--------C
Q 033065           20 VDCFTFSSSIADHLSSAS--LVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEEL-ADRKHLYCA--------H   88 (128)
Q Consensus        20 ~~v~~f~~~~~~~~~~ad--lvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l-~~~g~~~~~--------~   88 (128)
                      +.+.+|.|++ ++|+.++  ++|||||+||++|++++|+|+|++|..    .||..||+++ ++.|+|+.+        +
T Consensus       341 ~~v~~w~Pq~-~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~----~DQ~~na~~l~~~~G~g~~l~~~~~~~~~  415 (480)
T 2vch_A          341 FVIPFWAPQA-QVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLY----AEQKMNAVLLSEDIRAALRPRAGDDGLVR  415 (480)
T ss_dssp             EEEESCCCHH-HHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHTTCCEECCCCCTTSCCC
T ss_pred             EEEeCccCHH-HHhCCCCcCeEEecccchhHHHHHHcCCCEEecccc----ccchHHHHHHHHHhCeEEEeecccCCccC
Confidence            4555699985 9998888  899999999999999999999999996    7899999998 689999753        6


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      .++|+++|++++.
T Consensus       416 ~~~l~~av~~vl~  428 (480)
T 2vch_A          416 REEVARVVKGLME  428 (480)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhc
Confidence            7899999998864

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=99.33  E-value=8.1e-12  Score=95.45  Aligned_cols=103  Identities=17%  Similarity=0.179  Sum_probs=84.4

Q ss_pred             cEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C--hHHHH
Q 033065           19 AVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---H--PQSLH   93 (128)
Q Consensus        19 ~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~--~~~l~   93 (128)
                      ++++.+|++++.++|+.||++|+++|.+++.|++++|+|+|..|.+.. +++|..|++.+.+.|.++..   +  ++.|.
T Consensus       238 ~v~~~g~~~~~~~~~~~ad~~v~~sg~~~~~EAma~G~Pvi~~~~~g~-~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la  316 (364)
T 1f0k_A          238 QHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHK-DRQQYWNALPLEKAGAAKIIEQPQLSVDAVA  316 (364)
T ss_dssp             TSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCCT-TCHHHHHHHHHHHTTSEEECCGGGCCHHHHH
T ss_pred             ceEEecchhhHHHHHHhCCEEEECCchHHHHHHHHhCCCEEEeeCCCC-chhHHHHHHHHHhCCcEEEeccccCCHHHHH
Confidence            789999999999999999999999999999999999999999988643 47999999999999998775   3  68899


Q ss_pred             HHHHhcchh---------cCCCCCCCChHHHHHHHHHhc
Q 033065           94 QVIVGMDLK---------SLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        94 ~~i~~l~~~---------~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      ++|.++ +.         ..+.....+.+.+++.+.+.+
T Consensus       317 ~~i~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y  354 (364)
T 1f0k_A          317 NTLAGW-SRETLLTMAERARAASIPDATERVANEVSRVA  354 (364)
T ss_dssp             HHHHTC-CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHH
T ss_pred             HHHHhc-CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHH
Confidence            999877 21         122223456777888777654

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=98.88  E-value=9.6e-09  Score=81.34  Aligned_cols=99  Identities=14%  Similarity=0.156  Sum_probs=76.9

Q ss_pred             ccEEEEeChh--hHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChHHHH
Q 033065           18 LAVDCFTFSS--SIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--HPQSLH   93 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--~~~~l~   93 (128)
                      .++++.++..  +|..+|+.||++|+.+|..+ .|++++|+|+|++|..   .++|+     +.+.|.++.+  ++++|.
T Consensus       282 ~~v~l~~~l~~~~~~~l~~~ad~vv~~SGg~~-~EA~a~g~PvV~~~~~---~~~~e-----~v~~g~~~lv~~d~~~l~  352 (403)
T 3ot5_A          282 ERIHLIEPLDAIDFHNFLRKSYLVFTDSGGVQ-EEAPGMGVPVLVLRDT---TERPE-----GIEAGTLKLIGTNKENLI  352 (403)
T ss_dssp             TTEEEECCCCHHHHHHHHHHEEEEEECCHHHH-HHGGGTTCCEEECCSS---CSCHH-----HHHHTSEEECCSCHHHHH
T ss_pred             CCEEEeCCCCHHHHHHHHHhcCEEEECCccHH-HHHHHhCCCEEEecCC---Ccchh-----heeCCcEEEcCCCHHHHH
Confidence            4788999875  79999999999999998544 8999999999999643   24554     2466777654  789999


Q ss_pred             HHHHhcchh---------cCCCC-CCCChHHHHHHHHHhcCC
Q 033065           94 QVIVGMDLK---------SLLPY-QPGDATPVAKLINRFLGF  125 (128)
Q Consensus        94 ~~i~~l~~~---------~~~~~-~~~~~~~i~~~i~~~~g~  125 (128)
                      +++.+++..         ..++| ..+++++|++.|.+.+++
T Consensus       353 ~ai~~ll~~~~~~~~m~~~~~~~g~~~aa~rI~~~l~~~l~~  394 (403)
T 3ot5_A          353 KEALDLLDNKESHDKMAQAANPYGDGFAANRILAAIKSHFEE  394 (403)
T ss_dssp             HHHHHHHHCHHHHHHHHHSCCTTCCSCHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHcCHHHHHHHHhhcCcccCCcHHHHHHHHHHHHhCC
Confidence            999888531         23344 346788999999999886

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=98.71  E-value=8.5e-08  Score=73.52  Aligned_cols=98  Identities=22%  Similarity=0.301  Sum_probs=71.9

Q ss_pred             ccEEEE---eChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChHHH
Q 033065           18 LAVDCF---TFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--HPQSL   92 (128)
Q Consensus        18 ~~~~v~---~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--~~~~l   92 (128)
                      .++++.   +|. ++.++|+.||++|+.+| |.+.|++++|+|+|+.+..   .+.+.     +.+.|.++.+  +++.|
T Consensus       255 ~~v~~~g~~g~~-~~~~~~~~ad~~v~~S~-g~~lEA~a~G~PvI~~~~~---~~~~~-----~~~~g~g~lv~~d~~~l  324 (376)
T 1v4v_A          255 RNFVLLDPLEYG-SMAALMRASLLLVTDSG-GLQEEGAALGVPVVVLRNV---TERPE-----GLKAGILKLAGTDPEGV  324 (376)
T ss_dssp             TTEEEECCCCHH-HHHHHHHTEEEEEESCH-HHHHHHHHTTCCEEECSSS---CSCHH-----HHHHTSEEECCSCHHHH
T ss_pred             CCEEEECCCCHH-HHHHHHHhCcEEEECCc-CHHHHHHHcCCCEEeccCC---Ccchh-----hhcCCceEECCCCHHHH
Confidence            378888   566 78999999999999996 4577999999999998753   23333     2345666554  88999


Q ss_pred             HHHHHhcchh---------cCCCC-CCCChHHHHHHHHHhcCC
Q 033065           93 HQVIVGMDLK---------SLLPY-QPGDATPVAKLINRFLGF  125 (128)
Q Consensus        93 ~~~i~~l~~~---------~~~~~-~~~~~~~i~~~i~~~~g~  125 (128)
                      .++|.+++.+         ..+.+ ...+++++++.+.+.++.
T Consensus       325 a~~i~~ll~d~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~  367 (376)
T 1v4v_A          325 YRVVKGLLENPEELSRMRKAKNPYGDGKAGLMVARGVAWRLGL  367 (376)
T ss_dssp             HHHHHHHHTCHHHHHHHHHSCCSSCCSCHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHhChHhhhhhcccCCCCCCChHHHHHHHHHHHHhcc
Confidence            9999888531         12233 346788999999888764

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=98.67  E-value=3.7e-08  Score=77.74  Aligned_cols=99  Identities=10%  Similarity=0.083  Sum_probs=72.8

Q ss_pred             ccEEEEeChh--hHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChHHHH
Q 033065           18 LAVDCFTFSS--SIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--HPQSLH   93 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--~~~~l~   93 (128)
                      .++++.+...  +|..+|+.||+|||.+|. .+.|+.++|+|+|+++...   ..|+     ..+.|.++.+  ++++|.
T Consensus       263 ~~v~l~~~lg~~~~~~l~~~adlvvt~SGg-v~~EA~alG~Pvv~~~~~t---er~e-----~v~~G~~~lv~~d~~~i~  333 (385)
T 4hwg_A          263 DKIRFLPAFSFTDYVKLQMNAFCILSDSGT-ITEEASILNLPALNIREAH---ERPE-----GMDAGTLIMSGFKAERVL  333 (385)
T ss_dssp             GGEEECCCCCHHHHHHHHHHCSEEEECCTT-HHHHHHHTTCCEEECSSSC---SCTH-----HHHHTCCEECCSSHHHHH
T ss_pred             CCEEEEcCCCHHHHHHHHHhCcEEEECCcc-HHHHHHHcCCCEEEcCCCc---cchh-----hhhcCceEEcCCCHHHHH
Confidence            4677754432  588999999999999996 5799999999999997531   2344     2456766554  789999


Q ss_pred             HHHHhcchhcC---------CC--CCCCChHHHHHHHHHhcCC
Q 033065           94 QVIVGMDLKSL---------LP--YQPGDATPVAKLINRFLGF  125 (128)
Q Consensus        94 ~~i~~l~~~~~---------~~--~~~~~~~~i~~~i~~~~g~  125 (128)
                      +++.++++...         ++  ...+++++|++.|.+.+++
T Consensus       334 ~ai~~ll~d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~~~~~  376 (385)
T 4hwg_A          334 QAVKTITEEHDNNKRTQGLVPDYNEAGLVSKKILRIVLSYVDY  376 (385)
T ss_dssp             HHHHHHHTTCBTTBCCSCCCHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhChHHHHHhhccCCCCCCCChHHHHHHHHHHHHhhh
Confidence            99998875321         12  3456788999999887764

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=98.63  E-value=6.8e-08  Score=76.14  Aligned_cols=95  Identities=15%  Similarity=0.237  Sum_probs=69.2

Q ss_pred             ccEEEEeCh--hhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChHHHH
Q 033065           18 LAVDCFTFS--SSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--HPQSLH   93 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--~~~~l~   93 (128)
                      .++++.++.  .+|..+|+.||++|+.+| |...|++++|+|+|+....   ...|     .+.+.|.++.+  ++++|.
T Consensus       288 ~~v~~~~~lg~~~~~~l~~~ad~vv~~SG-g~~~EA~a~G~PvV~~~~~---~~~~-----e~v~~G~~~lv~~d~~~l~  358 (396)
T 3dzc_A          288 SNIVLIEPQQYLPFVYLMDRAHIILTDSG-GIQEEAPSLGKPVLVMRET---TERP-----EAVAAGTVKLVGTNQQQIC  358 (396)
T ss_dssp             TTEEEECCCCHHHHHHHHHHCSEEEESCS-GGGTTGGGGTCCEEECCSS---CSCH-----HHHHHTSEEECTTCHHHHH
T ss_pred             CCEEEeCCCCHHHHHHHHHhcCEEEECCc-cHHHHHHHcCCCEEEccCC---Ccch-----HHHHcCceEEcCCCHHHHH
Confidence            478888777  468899999999999998 5558999999999997432   1222     24566777654  688999


Q ss_pred             HHHHhcchh---------cCCCC-CCCChHHHHHHHHH
Q 033065           94 QVIVGMDLK---------SLLPY-QPGDATPVAKLINR  121 (128)
Q Consensus        94 ~~i~~l~~~---------~~~~~-~~~~~~~i~~~i~~  121 (128)
                      +++.+++.+         ..++| ..+++++|++.|.+
T Consensus       359 ~ai~~ll~d~~~~~~m~~~~~~~~~~~aa~ri~~~l~~  396 (396)
T 3dzc_A          359 DALSLLLTDPQAYQAMSQAHNPYGDGKACQRIADILAK  396 (396)
T ss_dssp             HHHHHHHHCHHHHHHHHTSCCTTCCSCHHHHHHHHHHC
T ss_pred             HHHHHHHcCHHHHHHHhhccCCCcCChHHHHHHHHHhC
Confidence            999888642         22334 34677888888753

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=98.52  E-value=2.9e-07  Score=70.51  Aligned_cols=98  Identities=14%  Similarity=0.146  Sum_probs=69.5

Q ss_pred             ccEEEEeCh--hhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChHHHH
Q 033065           18 LAVDCFTFS--SSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--HPQSLH   93 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--~~~~l~   93 (128)
                      .++++.++.  .++.++|+.||++|+.+|. ++.|++++|+|+|+.+...   +.+ +    +.+.|.++.+  +++.|.
T Consensus       263 ~~v~~~g~~~~~~~~~~~~~ad~~v~~Sg~-~~lEA~a~G~PvI~~~~~~---~~~-e----~v~~g~g~lv~~d~~~la  333 (384)
T 1vgv_A          263 KNVILIDPQEYLPFVWLMNHAWLILTDSGG-IQEEAPSLGKPVLVMRDTT---ERP-E----AVTAGTVRLVGTDKQRIV  333 (384)
T ss_dssp             TTEEEECCCCHHHHHHHHHHCSEEEESSST-GGGTGGGGTCCEEEESSCC---SCH-H----HHHHTSEEEECSSHHHHH
T ss_pred             CCEEEeCCCCHHHHHHHHHhCcEEEECCcc-hHHHHHHcCCCEEEccCCC---Ccc-h----hhhCCceEEeCCCHHHHH
Confidence            468884332  5799999999999999975 5899999999999998731   212 2    2344666554  789999


Q ss_pred             HHHHhcchh---------cCCCC-CCCChHHHHHHHHHhcC
Q 033065           94 QVIVGMDLK---------SLLPY-QPGDATPVAKLINRFLG  124 (128)
Q Consensus        94 ~~i~~l~~~---------~~~~~-~~~~~~~i~~~i~~~~g  124 (128)
                      ++|.+++++         ..+.+ ...+.+++++.+.+.+.
T Consensus       334 ~~i~~ll~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  374 (384)
T 1vgv_A          334 EEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALKNNRI  374 (384)
T ss_dssp             HHHHHHHHCHHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHhChHHHhhhhhccCCCcCCCHHHHHHHHHHHHHH
Confidence            999888531         11222 34567888888877653

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=98.40  E-value=3.1e-06  Score=64.35  Aligned_cols=98  Identities=13%  Similarity=0.135  Sum_probs=69.5

Q ss_pred             ccEEEEeChh--hHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChHHHH
Q 033065           18 LAVDCFTFSS--SIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--HPQSLH   93 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--~~~~l~   93 (128)
                      .++++.++.+  ++..+|+.||++|+.+| +++.|++++|+|+|..+..   .+.+     .+.+.|.++..  ++++|.
T Consensus       263 ~~v~~~g~~~~~~~~~~~~~ad~~v~~sg-~~~lEA~a~G~Pvi~~~~~---~~~~-----e~v~~g~g~~v~~d~~~la  333 (375)
T 3beo_A          263 GRIHLIEPLDVIDFHNVAARSYLMLTDSG-GVQEEAPSLGVPVLVLRDT---TERP-----EGIEAGTLKLAGTDEETIF  333 (375)
T ss_dssp             TTEEEECCCCHHHHHHHHHTCSEEEECCH-HHHHHHHHHTCCEEECSSC---CSCH-----HHHHTTSEEECCSCHHHHH
T ss_pred             CCEEEeCCCCHHHHHHHHHhCcEEEECCC-ChHHHHHhcCCCEEEecCC---CCCc-----eeecCCceEEcCCCHHHHH
Confidence            4788855542  68999999999999986 5799999999999998542   1222     23456666654  889999


Q ss_pred             HHHHhcchh----------cCCCCCCCChHHHHHHHHHhcC
Q 033065           94 QVIVGMDLK----------SLLPYQPGDATPVAKLINRFLG  124 (128)
Q Consensus        94 ~~i~~l~~~----------~~~~~~~~~~~~i~~~i~~~~g  124 (128)
                      ++|.+++++          ..+.....+.+++++.+.+.++
T Consensus       334 ~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  374 (375)
T 3beo_A          334 SLADELLSDKEAHDKMSKASNPYGDGRASERIVEAILKHFN  374 (375)
T ss_dssp             HHHHHHHHCHHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhChHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence            999888641          1111234567888888887764

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=98.24  E-value=5.8e-06  Score=57.48  Aligned_cols=77  Identities=18%  Similarity=0.185  Sum_probs=59.3

Q ss_pred             ccEEEEeChhh--HHHHHhhccEEEe----cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eCh
Q 033065           18 LAVDCFTFSSS--IADHLSSASLVIS----HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC--AHP   89 (128)
Q Consensus        18 ~~~~v~~f~~~--~~~~~~~adlvIt----haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~--~~~   89 (128)
                      .++++.+|+++  +.++|+.||++|.    -+...++.|++++|+|+|....+        .+.+.+.+.+.+++  .++
T Consensus        78 ~~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~--------~~~e~i~~~~~g~~~~~d~  149 (177)
T 2f9f_A           78 DNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEG--------GFKETVINEKTGYLVNADV  149 (177)
T ss_dssp             TTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSH--------HHHHHCCBTTTEEEECSCH
T ss_pred             CcEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCC--------CHHHHhcCCCccEEeCCCH
Confidence            38999999976  9999999999997    23345999999999999997642        34445554445544  378


Q ss_pred             HHHHHHHHhcchh
Q 033065           90 QSLHQVIVGMDLK  102 (128)
Q Consensus        90 ~~l~~~i~~l~~~  102 (128)
                      +++.++|.+++++
T Consensus       150 ~~l~~~i~~l~~~  162 (177)
T 2f9f_A          150 NEIIDAMKKVSKN  162 (177)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999998753

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*

Probab=98.11  E-value=4.4e-06  Score=65.12  Aligned_cols=80  Identities=14%  Similarity=0.110  Sum_probs=61.3

Q ss_pred             cEEEEeChhhHHHHHhhccEEEe---c--CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-ChHHH
Q 033065           19 AVDCFTFSSSIADHLSSASLVIS---H--AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-HPQSL   92 (128)
Q Consensus        19 ~~~v~~f~~~~~~~~~~adlvIt---h--aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-~~~~l   92 (128)
                      ++.+.++.+++..+|+.||+++.   .  .|..++.|++++|+|+|.-|..    ....+..+.+.+.|.++.. +++.|
T Consensus       261 ~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~----~~~~e~~~~~~~~G~l~~~~d~~~L  336 (374)
T 2xci_A          261 DVILVDRFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYT----HKVNDLKEFLEKEGAGFEVKNETEL  336 (374)
T ss_dssp             SEEECCSSSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCC----TTSHHHHHHHHHTTCEEECCSHHHH
T ss_pred             cEEEECCHHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCc----cChHHHHHHHHHCCCEEEeCCHHHH
Confidence            46666778899999999999554   1  2447899999999999976653    2335566666677887665 89999


Q ss_pred             HHHHHhcchh
Q 033065           93 HQVIVGMDLK  102 (128)
Q Consensus        93 ~~~i~~l~~~  102 (128)
                      .++|.+++++
T Consensus       337 a~ai~~ll~d  346 (374)
T 2xci_A          337 VTKLTELLSV  346 (374)
T ss_dssp             HHHHHHHHHS
T ss_pred             HHHHHHHHhH
Confidence            9999999864

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=98.08  E-value=1.3e-05  Score=60.70  Aligned_cols=77  Identities=17%  Similarity=0.226  Sum_probs=59.9

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEe----cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe----C
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVIS----HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA----H   88 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIt----haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~----~   88 (128)
                      ..++++.++.+++.++|+.||++|.    -+...++.|++++|+|+|..+...        +.+.+.+.+.+++.    +
T Consensus       252 ~~~v~~~g~~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~--------~~e~i~~~~~g~~~~~~~~  323 (374)
T 2iw1_A          252 RSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCG--------YAHYIADANCGTVIAEPFS  323 (374)
T ss_dssp             GGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTST--------TTHHHHHHTCEEEECSSCC
T ss_pred             CCcEEECCCcccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCC--------chhhhccCCceEEeCCCCC
Confidence            3589999999999999999999997    345679999999999999987642        23344554555443    6


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      ++++.++|.++++
T Consensus       324 ~~~l~~~i~~l~~  336 (374)
T 2iw1_A          324 QEQLNEVLRKALT  336 (374)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHc
Confidence            7899999988853

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=97.93  E-value=2.6e-05  Score=54.42  Aligned_cols=74  Identities=18%  Similarity=0.111  Sum_probs=56.5

Q ss_pred             cEEE-EeChh--hHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C
Q 033065           19 AVDC-FTFSS--SIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---H   88 (128)
Q Consensus        19 ~~~v-~~f~~--~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~   88 (128)
                      ++++ .+|++  ++.++|+.||++|.-.    ...++.|++++|+|+|....+        ...+.+ ..+.+++.   +
T Consensus        96 ~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~--------~~~e~~-~~~~g~~~~~~~  166 (200)
T 2bfw_A           96 NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG--------GLRDII-TNETGILVKAGD  166 (200)
T ss_dssp             TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCH--------HHHHHC-CTTTCEEECTTC
T ss_pred             CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCC--------ChHHHc-CCCceEEecCCC
Confidence            7888 99997  8999999999999755    136899999999998887542        234444 33344443   7


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      ++.+.++|.++..
T Consensus       167 ~~~l~~~i~~l~~  179 (200)
T 2bfw_A          167 PGELANAILKALE  179 (200)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            8899999988865

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=97.89  E-value=5.7e-05  Score=58.37  Aligned_cols=76  Identities=12%  Similarity=0.138  Sum_probs=59.2

Q ss_pred             ccEEEEeChh-----hHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-
Q 033065           18 LAVDCFTFSS-----SIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-   87 (128)
Q Consensus        18 ~~~~v~~f~~-----~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-   87 (128)
                      .++++.+|++     ++.++|+.||++|.-+    ...++.|++++|+|+|..+.+        .+.+.+.+.+.+++. 
T Consensus       293 ~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~--------g~~e~i~~~~~g~l~~  364 (416)
T 2x6q_A          293 YDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVG--------GIKFQIVDGETGFLVR  364 (416)
T ss_dssp             TTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCH--------HHHHHCCBTTTEEEES
T ss_pred             CcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCC--------CChhheecCCCeEEEC
Confidence            4799999875     7999999999999876    446999999999999998652        244555554455443 


Q ss_pred             ChHHHHHHHHhcch
Q 033065           88 HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ~~~~l~~~i~~l~~  101 (128)
                      ++++|.++|.++++
T Consensus       365 d~~~la~~i~~ll~  378 (416)
T 2x6q_A          365 DANEAVEVVLYLLK  378 (416)
T ss_dssp             SHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHh
Confidence            88899999988854

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=97.88  E-value=2.3e-05  Score=59.60  Aligned_cols=76  Identities=12%  Similarity=0.092  Sum_probs=58.6

Q ss_pred             cccEEEEeCh--hhHHHHHhhccEEEe-----------cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCC
Q 033065           17 LLAVDCFTFS--SSIADHLSSASLVIS-----------HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKH   83 (128)
Q Consensus        17 ~~~~~v~~f~--~~~~~~~~~adlvIt-----------haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~   83 (128)
                      ..++++.+|+  +++.++|+.||++|.           -+...++.|++++|+|+|.-+.+..    .    +. .+.|.
T Consensus       252 ~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~----~----e~-i~~~~  322 (394)
T 3okp_A          252 SQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGA----P----ET-VTPAT  322 (394)
T ss_dssp             GGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTG----G----GG-CCTTT
T ss_pred             cCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCCh----H----HH-HhcCC
Confidence            3689999999  689999999999997           6667899999999999999876521    1    11 22335


Q ss_pred             EEEe---ChHHHHHHHHhcch
Q 033065           84 LYCA---HPQSLHQVIVGMDL  101 (128)
Q Consensus        84 ~~~~---~~~~l~~~i~~l~~  101 (128)
                      ++..   +++++.++|.+++.
T Consensus       323 g~~~~~~d~~~l~~~i~~l~~  343 (394)
T 3okp_A          323 GLVVEGSDVDKLSELLIELLD  343 (394)
T ss_dssp             EEECCTTCHHHHHHHHHHHHT
T ss_pred             ceEeCCCCHHHHHHHHHHHHh
Confidence            5543   78899999988853

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=97.87  E-value=6.1e-05  Score=58.41  Aligned_cols=76  Identities=13%  Similarity=0.104  Sum_probs=58.6

Q ss_pred             ccEEEEeCh--hhHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C
Q 033065           18 LAVDCFTFS--SSIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---H   88 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~   88 (128)
                      .++++.+|+  +++.++|+.||++|.-+    ...++.|++++|+|+|..+..    +    ..+.+.+.+.+++.   +
T Consensus       306 ~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~----~~e~i~~~~~g~~~~~~d  377 (438)
T 3c48_A          306 KRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVG----G----LPIAVAEGETGLLVDGHS  377 (438)
T ss_dssp             TTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCT----T----HHHHSCBTTTEEEESSCC
T ss_pred             CcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCC----C----hhHHhhCCCcEEECCCCC
Confidence            479999999  67999999999999764    246899999999999998764    1    33344444456553   7


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      +++|.++|.++++
T Consensus       378 ~~~la~~i~~l~~  390 (438)
T 3c48_A          378 PHAWADALATLLD  390 (438)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHc
Confidence            8999999988864

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=97.76  E-value=1.6e-05  Score=61.01  Aligned_cols=76  Identities=13%  Similarity=0.133  Sum_probs=57.6

Q ss_pred             ccEEEEeChhhHHHHHhhccEEE----ecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChH
Q 033065           18 LAVDCFTFSSSIADHLSSASLVI----SHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---HPQ   90 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~~~adlvI----thaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~~~   90 (128)
                      .++++.++.+++.++|+.||++|    .-+...++.|++++|+|+|..+.+..        .+.+.+.+.+++.   +++
T Consensus       267 ~~v~~~g~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~--------~e~v~~~~~g~~~~~~d~~  338 (394)
T 2jjm_A          267 DRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGI--------PEVIQHGDTGYLCEVGDTT  338 (394)
T ss_dssp             GGBCCCBSCSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTS--------TTTCCBTTTEEEECTTCHH
T ss_pred             CeEEEeCchhhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCCh--------HHHhhcCCceEEeCCCCHH
Confidence            47888888889999999999999    55666899999999999999876522        1122233355443   788


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      +|.++|.+++.
T Consensus       339 ~la~~i~~l~~  349 (394)
T 2jjm_A          339 GVADQAIQLLK  349 (394)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHc
Confidence            99999888754

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=97.75  E-value=7.2e-05  Score=57.13  Aligned_cols=77  Identities=12%  Similarity=0.088  Sum_probs=58.5

Q ss_pred             cccEEEEeChhh--HHHHHhhccEEEecCc-----hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--
Q 033065           17 LLAVDCFTFSSS--IADHLSSASLVISHAG-----SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--   87 (128)
Q Consensus        17 ~~~~~v~~f~~~--~~~~~~~adlvIthaG-----~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--   87 (128)
                      ..++++.+|+++  +.++|+.||++|.-+.     ..++.|++++|+|+|..+.+        ...+.+.+...++..  
T Consensus       262 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~--------~~~e~i~~~~~g~~~~~  333 (406)
T 2gek_A          262 AGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLD--------AFRRVLADGDAGRLVPV  333 (406)
T ss_dssp             GGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCH--------HHHHHHTTTTSSEECCT
T ss_pred             cCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCC--------cHHHHhcCCCceEEeCC
Confidence            457999999964  6999999999997653     46999999999999987652        344555544455443  


Q ss_pred             -ChHHHHHHHHhcch
Q 033065           88 -HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 -~~~~l~~~i~~l~~  101 (128)
                       +++++.++|.++++
T Consensus       334 ~d~~~l~~~i~~l~~  348 (406)
T 2gek_A          334 DDADGMAAALIGILE  348 (406)
T ss_dssp             TCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHc
Confidence             78899999888753

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=97.56  E-value=0.00011  Score=59.27  Aligned_cols=80  Identities=10%  Similarity=0.031  Sum_probs=58.6

Q ss_pred             ccEEEEeChh--hHHHHHhhccEEEec---CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChH
Q 033065           18 LAVDCFTFSS--SIADHLSSASLVISH---AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC--AHPQ   90 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~adlvIth---aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~--~~~~   90 (128)
                      .++++.+|++  ++.++|+.||++|.-   ++..++.|++++|+|+|.+|......+   .-+..+...|..-+  -+++
T Consensus       434 ~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~---~~~~~l~~~g~~e~v~~~~~  510 (568)
T 2vsy_A          434 QRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFAAR---VAGSLNHHLGLDEMNVADDA  510 (568)
T ss_dssp             GGEEEECCCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGS---HHHHHHHHHTCGGGBCSSHH
T ss_pred             hHEEeeCCCCHHHHHHHHhcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHH---HHHHHHHHCCChhhhcCCHH
Confidence            4699999995  799999999999843   456799999999999999876532111   22445555566522  2788


Q ss_pred             HHHHHHHhcc
Q 033065           91 SLHQVIVGMD  100 (128)
Q Consensus        91 ~l~~~i~~l~  100 (128)
                      .+.+++.++.
T Consensus       511 ~la~~i~~l~  520 (568)
T 2vsy_A          511 AFVAKAVALA  520 (568)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            8888887775

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=97.36  E-value=0.00032  Score=52.69  Aligned_cols=76  Identities=21%  Similarity=0.185  Sum_probs=56.6

Q ss_pred             ccEEEEeChhh--HHHHHhhccEEEec--------------CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh-
Q 033065           18 LAVDCFTFSSS--IADHLSSASLVISH--------------AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD-   80 (128)
Q Consensus        18 ~~~~v~~f~~~--~~~~~~~adlvIth--------------aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~-   80 (128)
                      .++++.+|+++  +.++|+.||++|.-              +-..++.|++++|+|+|....+    +    +.+.+.+ 
T Consensus       212 ~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~----~~e~~~~~  283 (342)
T 2iuy_A          212 STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----C----LAEIVPSV  283 (342)
T ss_dssp             TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----T----HHHHGGGG
T ss_pred             CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----C----hHHHhccc
Confidence            58999999975  59999999999942              3357899999999999998764    2    3444544 


Q ss_pred             ---CCCEEEeChHHHHHHHHhcch
Q 033065           81 ---RKHLYCAHPQSLHQVIVGMDL  101 (128)
Q Consensus        81 ---~g~~~~~~~~~l~~~i~~l~~  101 (128)
                         .|..+-.+++++.++|.++++
T Consensus       284 ~~~~g~~~~~d~~~l~~~i~~l~~  307 (342)
T 2iuy_A          284 GEVVGYGTDFAPDEARRTLAGLPA  307 (342)
T ss_dssp             EEECCSSSCCCHHHHHHHHHTSCC
T ss_pred             CCCceEEcCCCHHHHHHHHHHHHH
Confidence               233221278999999998864

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=97.25  E-value=0.001  Score=52.66  Aligned_cols=75  Identities=19%  Similarity=0.143  Sum_probs=55.7

Q ss_pred             ccEEEEeCh--hhHHHHHhhc----cEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe
Q 033065           18 LAVDCFTFS--SSIADHLSSA----SLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA   87 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~a----dlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~   87 (128)
                      .++++.+|+  +++.++|+.|    |++|.-+    -..++.|++++|+|+|.-...    +    ..+.+.....++..
T Consensus       335 ~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g----~~e~v~~~~~g~l~  406 (499)
T 2r60_A          335 GKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNG----G----PAEILDGGKYGVLV  406 (499)
T ss_dssp             TTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSB----H----HHHHTGGGTSSEEE
T ss_pred             ceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCC----C----HHHHhcCCceEEEe
Confidence            479999997  6799999999    9999543    235899999999999998653    2    33344443344333


Q ss_pred             ---ChHHHHHHHHhcc
Q 033065           88 ---HPQSLHQVIVGMD  100 (128)
Q Consensus        88 ---~~~~l~~~i~~l~  100 (128)
                         +++.|.++|.+++
T Consensus       407 ~~~d~~~la~~i~~ll  422 (499)
T 2r60_A          407 DPEDPEDIARGLLKAF  422 (499)
T ss_dssp             CTTCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHH
Confidence               7888999988875

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=97.10  E-value=0.0022  Score=50.13  Aligned_cols=92  Identities=9%  Similarity=-0.094  Sum_probs=62.5

Q ss_pred             cccEEEEeChh--hHHHHHhhccEEEec----CchHHHHHHH-------HhCCCEEEEeCCCCCCchHHHHHHHHHhCCC
Q 033065           17 LLAVDCFTFSS--SIADHLSSASLVISH----AGSGSIFETL-------RLGKPLIVVVNEDLMDNHQSELAEELADRKH   83 (128)
Q Consensus        17 ~~~~~v~~f~~--~~~~~~~~adlvIth----aG~~Ti~E~l-------~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~   83 (128)
                      ..++++.++++  ++.++|+.||++|.-    +-..++.|++       ++|+|+|.-..              +.....
T Consensus       264 ~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~--------------v~~~~~  329 (406)
T 2hy7_A          264 GDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA--------------VVGPYK  329 (406)
T ss_dssp             CTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG--------------GTCSCS
T ss_pred             CCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh--------------cccCcc
Confidence            45899999984  699999999998842    2335789999       99999998743              222222


Q ss_pred             EEE-e---ChHHHHHHHHhcchhcCC-CCCCCChHHHHHHHHHh
Q 033065           84 LYC-A---HPQSLHQVIVGMDLKSLL-PYQPGDATPVAKLINRF  122 (128)
Q Consensus        84 ~~~-~---~~~~l~~~i~~l~~~~~~-~~~~~~~~~i~~~i~~~  122 (128)
                      ++. .   +++.|.++|.+++++... .....+-+.+++.+.+.
T Consensus       330 G~l~v~~~d~~~la~ai~~ll~~~~~~~~~~~sw~~~a~~~~~~  373 (406)
T 2hy7_A          330 SRFGYTPGNADSVIAAITQALEAPRVRYRQCLNWSDTTDRVLDP  373 (406)
T ss_dssp             SEEEECTTCHHHHHHHHHHHHHCCCCCCSCCCBHHHHHHHHHCG
T ss_pred             eEEEeCCCCHHHHHHHHHHHHhCcchhhhhcCCHHHHHHHHHHh
Confidence            333 2   789999999988764321 11223455666665544

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=97.05  E-value=0.0018  Score=49.58  Aligned_cols=74  Identities=15%  Similarity=0.065  Sum_probs=52.5

Q ss_pred             cEEEEeCh--hhHHHHHhhccEEEec----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---Ch
Q 033065           19 AVDCFTFS--SSIADHLSSASLVISH----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---HP   89 (128)
Q Consensus        19 ~~~v~~f~--~~~~~~~~~adlvIth----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~~   89 (128)
                      .+.+.+|+  +++.++|+.||++|.-    +-..++.|++++|+|+|.-..+    +    ..+.+. .|.++..   ++
T Consensus       312 ~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~----~----~~e~~~-~~~g~~~~~~d~  382 (439)
T 3fro_A          312 VKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----G----LRDIIT-NETGILVKAGDP  382 (439)
T ss_dssp             EEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESST----H----HHHHCC-TTTCEEECTTCH
T ss_pred             EEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCC----C----cceeEE-cCceEEeCCCCH
Confidence            34456655  4589999999999954    3347999999999999998653    2    223332 3455443   78


Q ss_pred             HHHHHHHHhcch
Q 033065           90 QSLHQVIVGMDL  101 (128)
Q Consensus        90 ~~l~~~i~~l~~  101 (128)
                      +++.++|.++++
T Consensus       383 ~~la~~i~~ll~  394 (439)
T 3fro_A          383 GELANAILKALE  394 (439)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999988865

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=97.01  E-value=0.001  Score=51.17  Aligned_cols=73  Identities=12%  Similarity=0.066  Sum_probs=52.5

Q ss_pred             EEEEeChh--hHHHHHhhccEEEe----cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC------------
Q 033065           20 VDCFTFSS--SIADHLSSASLVIS----HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR------------   81 (128)
Q Consensus        20 ~~v~~f~~--~~~~~~~~adlvIt----haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~------------   81 (128)
                      +.+.+|++  ++.++|+.||++|.    -+...++.|++++|+|+|.-...        ...+.+.+.            
T Consensus       256 v~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~--------g~~e~v~~~~~~~i~~~~~~~  327 (413)
T 3oy2_A          256 MINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG--------GADDYFSGDCVYKIKPSAWIS  327 (413)
T ss_dssp             EEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH--------HHHHHSCTTTSEEECCCEEEE
T ss_pred             eeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC--------ChHHHHccCcccccccccccc
Confidence            66778875  79999999999994    23346899999999999997653        223333221            


Q ss_pred             -----CC--EEE-eChHHHHHHHHhcch
Q 033065           82 -----KH--LYC-AHPQSLHQVIVGMDL  101 (128)
Q Consensus        82 -----g~--~~~-~~~~~l~~~i~~l~~  101 (128)
                           |+  .+. .++++|.++| +++.
T Consensus       328 ~~~~~G~~gl~~~~d~~~la~~i-~l~~  354 (413)
T 3oy2_A          328 VDDRDGIGGIEGIIDVDDLVEAF-TFFK  354 (413)
T ss_dssp             CTTTCSSCCEEEECCHHHHHHHH-HHTT
T ss_pred             cccccCcceeeCCCCHHHHHHHH-HHhc
Confidence                 44  322 3899999999 8853

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=96.96  E-value=0.0015  Score=51.41  Aligned_cols=75  Identities=16%  Similarity=0.085  Sum_probs=54.2

Q ss_pred             ccEE-EEeChhhH-HHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC---------C
Q 033065           18 LAVD-CFTFSSSI-ADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR---------K   82 (128)
Q Consensus        18 ~~~~-v~~f~~~~-~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~---------g   82 (128)
                      .+++ +.+|.++. .++|+.||++|.-+    -..++.|++++|+|+|.....        ...+.+.+.         +
T Consensus       346 ~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~g--------g~~e~v~~~~~~~~~~~~~  417 (485)
T 1rzu_A          346 GRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG--------GLADTVIDANHAALASKAA  417 (485)
T ss_dssp             TTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH--------HHHHHCCBCCHHHHHTTCC
T ss_pred             CcEEEecCCCHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCC--------ChhheecccccccccccCC
Confidence            4676 67886654 79999999999543    346899999999999997642        233444432         3


Q ss_pred             CEEEe---ChHHHHHHHHhcc
Q 033065           83 HLYCA---HPQSLHQVIVGMD  100 (128)
Q Consensus        83 ~~~~~---~~~~l~~~i~~l~  100 (128)
                      .++..   ++++|.++|.+++
T Consensus       418 ~G~l~~~~d~~~la~~i~~ll  438 (485)
T 1rzu_A          418 TGVQFSPVTLDGLKQAIRRTV  438 (485)
T ss_dssp             CBEEESSCSHHHHHHHHHHHH
T ss_pred             cceEeCCCCHHHHHHHHHHHH
Confidence            45443   7889999998876

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=96.92  E-value=0.0034  Score=48.55  Aligned_cols=75  Identities=12%  Similarity=0.088  Sum_probs=55.8

Q ss_pred             cEEEEeChh--hHHHHHhhccEEEe-cCc----------hHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE
Q 033065           19 AVDCFTFSS--SIADHLSSASLVIS-HAG----------SGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLY   85 (128)
Q Consensus        19 ~~~v~~f~~--~~~~~~~~adlvIt-haG----------~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~   85 (128)
                      |+++.++++  ++..+++++|+.+. ..|          .+.+.|.+++|+|+|+-+..        .+++.+.+.+.|+
T Consensus       215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~--------~~~~~v~~~~~G~  286 (339)
T 3rhz_A          215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGI--------ANQELIENNGLGW  286 (339)
T ss_dssp             TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTC--------TTTHHHHHHTCEE
T ss_pred             CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccCh--------hHHHHHHhCCeEE
Confidence            899999985  58888977665444 233          35689999999999986543        3566777788887


Q ss_pred             Ee-ChHHHHHHHHhcch
Q 033065           86 CA-HPQSLHQVIVGMDL  101 (128)
Q Consensus        86 ~~-~~~~l~~~i~~l~~  101 (128)
                      +. +.+++.+.|.++..
T Consensus       287 ~~~~~~e~~~~i~~l~~  303 (339)
T 3rhz_A          287 IVKDVEEAIMKVKNVNE  303 (339)
T ss_dssp             EESSHHHHHHHHHHCCH
T ss_pred             EeCCHHHHHHHHHHhCH
Confidence            75 66788888887753

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=96.87  E-value=0.0019  Score=50.86  Aligned_cols=74  Identities=16%  Similarity=0.227  Sum_probs=53.2

Q ss_pred             ccEEEEeCh--hhHHHHHhhccEEEe-----cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---
Q 033065           18 LAVDCFTFS--SSIADHLSSASLVIS-----HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---   87 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~adlvIt-----haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---   87 (128)
                      .++++.+++  +++.++|+.||++|.     .-| .++.|++++|+|+|. -....  .      +.+.....|+..   
T Consensus       295 ~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g-~~~lEAmA~G~PVV~-~~~g~--~------e~v~~~~~G~lv~~~  364 (413)
T 2x0d_A          295 IHLNSLGKLTLEDYADLLKRSSIGISLMISPHPS-YPPLEMAHFGLRVIT-NKYEN--K------DLSNWHSNIVSLEQL  364 (413)
T ss_dssp             EEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCC-SHHHHHHHTTCEEEE-ECBTT--B------CGGGTBTTEEEESSC
T ss_pred             CcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCC-cHHHHHHhCCCcEEE-eCCCc--c------hhhhcCCCEEEeCCC
Confidence            478899997  579999999999985     334 478999999999998 33211  1      122222345433   


Q ss_pred             ChHHHHHHHHhcch
Q 033065           88 HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ~~~~l~~~i~~l~~  101 (128)
                      +++.|+++|.++++
T Consensus       365 d~~~la~ai~~ll~  378 (413)
T 2x0d_A          365 NPENIAETLVELCM  378 (413)
T ss_dssp             SHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHc
Confidence            78999999998875

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=96.87  E-value=0.002  Score=50.68  Aligned_cols=75  Identities=15%  Similarity=0.114  Sum_probs=54.0

Q ss_pred             ccEE-EEeChhh-HHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhC---------C
Q 033065           18 LAVD-CFTFSSS-IADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR---------K   82 (128)
Q Consensus        18 ~~~~-v~~f~~~-~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~---------g   82 (128)
                      .+++ +.+|.++ +.++|+.||++|.-+    ...++.|++++|+|+|.-...        .+.+.+.+.         +
T Consensus       347 ~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~g--------g~~e~v~~~~~~~~~~~~~  418 (485)
T 2qzs_A          347 GQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTG--------GLADTVSDCSLENLADGVA  418 (485)
T ss_dssp             TTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH--------HHHHHCCBCCHHHHHTTCC
T ss_pred             CcEEEeCCCCHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCC--------CccceeccCcccccccccc
Confidence            4675 7788655 489999999999544    246899999999999998542        233444432         3


Q ss_pred             CEEEe---ChHHHHHHHHhcc
Q 033065           83 HLYCA---HPQSLHQVIVGMD  100 (128)
Q Consensus        83 ~~~~~---~~~~l~~~i~~l~  100 (128)
                      .++..   ++++|+++|.+++
T Consensus       419 ~G~l~~~~d~~~la~~i~~ll  439 (485)
T 2qzs_A          419 SGFVFEDSNAWSLLRAIRRAF  439 (485)
T ss_dssp             CBEEECSSSHHHHHHHHHHHH
T ss_pred             ceEEECCCCHHHHHHHHHHHH
Confidence            45443   7899999998876

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=96.57  E-value=0.0027  Score=42.69  Aligned_cols=77  Identities=14%  Similarity=0.189  Sum_probs=51.1

Q ss_pred             cccEEEEeCh--hhHHHHHhhccEEEec----CchHHHHHHHHhCC-CEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eC
Q 033065           17 LLAVDCFTFS--SSIADHLSSASLVISH----AGSGSIFETLRLGK-PLIVVVNEDLMDNHQSELAEELADRKHLYC-AH   88 (128)
Q Consensus        17 ~~~~~v~~f~--~~~~~~~~~adlvIth----aG~~Ti~E~l~~g~-P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~-~~   88 (128)
                      +.++++ +|+  +++.++|+.||++|.-    +...++.|++++|+ |+|......   ...    +.+.+.+..+. .+
T Consensus        55 ~~~v~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~----~~~~~~~~~~~~~~  126 (166)
T 3qhp_A           55 GVKAEF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLS---ATR----QFALDERSLFEPNN  126 (166)
T ss_dssp             TCEEEC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGG----GGCSSGGGEECTTC
T ss_pred             CCeEEE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chh----hhccCCceEEcCCC
Confidence            347777 886  4699999999999973    33469999999997 988843221   110    01111222222 27


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      ++++.++|.++.+
T Consensus       127 ~~~l~~~i~~l~~  139 (166)
T 3qhp_A          127 AKDLSAKIDWWLE  139 (166)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            8999999988865

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A

Probab=95.64  E-value=0.081  Score=44.41  Aligned_cols=79  Identities=9%  Similarity=0.057  Sum_probs=53.4

Q ss_pred             ccEEEEeChhh--HHHHHhhccEEEec---CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE---EeCh
Q 033065           18 LAVDCFTFSSS--IADHLSSASLVISH---AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLY---CAHP   89 (128)
Q Consensus        18 ~~~~v~~f~~~--~~~~~~~adlvIth---aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~---~~~~   89 (128)
                      .++.+.+..+.  .-..++.||+++--   +|.+|++|++++|+|+|..+-..   -.-..-+..+...|+.-   .-+.
T Consensus       499 ~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~---~asRvgaSlL~~~GLpE~LIA~d~  575 (631)
T 3q3e_A          499 DSATAHPHSPYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAE---VHEHIDEGLFKRLGLPEWLIANTV  575 (631)
T ss_dssp             GGEEEECCCCHHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSS---HHHHHHHHHHHHTTCCGGGEESSH
T ss_pred             ccEEEcCCCCHHHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCc---HHHHhHHHHHHhcCCCcceecCCH
Confidence            36777777653  44778999998854   67899999999999999998752   12233445566678762   2355


Q ss_pred             HHHHHHHHhc
Q 033065           90 QSLHQVIVGM   99 (128)
Q Consensus        90 ~~l~~~i~~l   99 (128)
                      ++..+...+|
T Consensus       576 eeYv~~Av~L  585 (631)
T 3q3e_A          576 DEYVERAVRL  585 (631)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            5555444333

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=95.07  E-value=0.064  Score=46.18  Aligned_cols=76  Identities=11%  Similarity=0.083  Sum_probs=51.8

Q ss_pred             cccEEEEeChh------hHHHHHh-hccEEEec----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE
Q 033065           17 LLAVDCFTFSS------SIADHLS-SASLVISH----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLY   85 (128)
Q Consensus        17 ~~~~~v~~f~~------~~~~~~~-~adlvIth----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~   85 (128)
                      ..++++.+|.+      ++..+++ .||++|.-    +-..++.||+++|+|+|.-...    +    ..+.+.+...++
T Consensus       639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~G----G----~~EiV~dg~~Gl  710 (816)
T 3s28_A          639 NGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----G----PAEIIVHGKSGF  710 (816)
T ss_dssp             BBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSB----T----HHHHCCBTTTBE
T ss_pred             CCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCC----C----hHHHHccCCcEE
Confidence            35788888643      4677777 57999854    2346999999999999998653    2    233333333454


Q ss_pred             Ee---ChHHHHHHHHhcc
Q 033065           86 CA---HPQSLHQVIVGMD  100 (128)
Q Consensus        86 ~~---~~~~l~~~i~~l~  100 (128)
                      ..   +++.+.++|.+++
T Consensus       711 lv~p~D~e~LA~aI~~lL  728 (816)
T 3s28_A          711 HIDPYHGDQAADTLADFF  728 (816)
T ss_dssp             EECTTSHHHHHHHHHHHH
T ss_pred             EeCCCCHHHHHHHHHHHH
Confidence            43   6788888886654

>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A

Probab=93.61  E-value=0.32  Score=35.36  Aligned_cols=79  Identities=15%  Similarity=0.092  Sum_probs=48.6

Q ss_pred             EEEEeChhh-HHHHHhhccEEE-ecCchHHHHHHH---------HhCCCEEEEeCCCCCCchHHHHHHHHHhCCC-----
Q 033065           20 VDCFTFSSS-IADHLSSASLVI-SHAGSGSIFETL---------RLGKPLIVVVNEDLMDNHQSELAEELADRKH-----   83 (128)
Q Consensus        20 ~~v~~f~~~-~~~~~~~adlvI-thaG~~Ti~E~l---------~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~-----   83 (128)
                      +.++.+... -..++..||.+| --||.||+-|+.         .+++|++++-..... ++=...-+.+.+.|.     
T Consensus        89 ~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw-~~l~~~l~~~~~~Gfi~~~~  167 (216)
T 1ydh_A           89 VRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYY-NNLLALFDTGVEEGFIKPGA  167 (216)
T ss_dssp             EEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTT-HHHHHHHHHHHHTTSSCHHH
T ss_pred             ccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccc-hHHHHHHHHHHHCCCCChHH
Confidence            444444432 234456788554 567899998887         469999999543111 122233356777775     


Q ss_pred             ----EEEeChHHHHHHHHhc
Q 033065           84 ----LYCAHPQSLHQVIVGM   99 (128)
Q Consensus        84 ----~~~~~~~~l~~~i~~l   99 (128)
                          .++-+++++.+.|++.
T Consensus       168 ~~~~~~~d~~ee~~~~l~~~  187 (216)
T 1ydh_A          168 RNIVVSAPTAKELMEKMEEY  187 (216)
T ss_dssp             HTTEEEESSHHHHHHHHHHC
T ss_pred             cCeEEEeCCHHHHHHHHHHh
Confidence                2334899988888764

>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}

Probab=93.48  E-value=0.35  Score=33.67  Aligned_cols=73  Identities=18%  Similarity=0.211  Sum_probs=44.6

Q ss_pred             hhHHHHHhhccEEEe--c---CchHHHHHH---HHhCCCEEEEeCC---CCCCchHHHHHHH----------------HH
Q 033065           27 SSIADHLSSASLVIS--H---AGSGSIFET---LRLGKPLIVVVNE---DLMDNHQSELAEE----------------LA   79 (128)
Q Consensus        27 ~~~~~~~~~adlvIt--h---aG~~Ti~E~---l~~g~P~I~vP~~---~~~~~~Q~~nA~~----------------l~   79 (128)
                      .++ +.|.+||+||.  .   .-.||.+|.   .+.|||++.+-..   ....+++..++-.                +-
T Consensus        62 ~D~-~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~~D~R~~g~~~~~~~~~~~~~~e~~f~~~N~~~~G~i  140 (162)
T 3ehd_A           62 ADT-ENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRQQGADNHQKLDALNEIAENQFHYLNLYTVGLI  140 (162)
T ss_dssp             HHH-HHHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEECCCGGGCCTTCHHHHHHTTSTTCCCSCCCCHHHHHHH
T ss_pred             HHH-HHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEcCcccccCCcchhhhhhHHHhhhhhhhhhHHHhhhH
Confidence            343 67999999998  3   358999996   6789999988332   2222333333320                00


Q ss_pred             hCCCEEEeChHHHHHHHHhcc
Q 033065           80 DRKHLYCAHPQSLHQVIVGMD  100 (128)
Q Consensus        80 ~~g~~~~~~~~~l~~~i~~l~  100 (128)
                      +.+..++.+.++|.+.|.+.+
T Consensus       141 ~~~g~~~~~~~~~~~~l~~~~  161 (162)
T 3ehd_A          141 KLNGRVVSSEEDLLEEIKQRL  161 (162)
T ss_dssp             HTTEEEESSHHHHHHHHHHTC
T ss_pred             HhCCeEEeCHHHHHHHHHHHh
Confidence            112234457788887776653

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=93.47  E-value=0.082  Score=39.67  Aligned_cols=34  Identities=12%  Similarity=0.346  Sum_probs=28.1

Q ss_pred             hhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEE
Q 033065           27 SSIADHLSSASLVISHAGSGSIFETLRLGKPLIVV   61 (128)
Q Consensus        27 ~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~v   61 (128)
                      .++..+|+.||++|+.-. |++..|.++|+|+|.+
T Consensus       253 ~e~~ali~~a~l~I~~Ds-g~~HlAaa~g~P~v~l  286 (348)
T 1psw_A          253 DQAVILIAACKAIVTNDS-GLMHVAAALNRPLVAL  286 (348)
T ss_dssp             HHHHHHHHTSSEEEEESS-HHHHHHHHTTCCEEEE
T ss_pred             HHHHHHHHhCCEEEecCC-HHHHHHHHcCCCEEEE
Confidence            568899999999999843 3455588999999988

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=93.46  E-value=0.25  Score=41.69  Aligned_cols=63  Identities=16%  Similarity=0.173  Sum_probs=45.8

Q ss_pred             cEEEEeChh--hHHHHHhhccEEEe---cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCE
Q 033065           19 AVDCFTFSS--SIADHLSSASLVIS---HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL   84 (128)
Q Consensus        19 ~~~v~~f~~--~~~~~~~~adlvIt---haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~   84 (128)
                      ++.+.+..+  +.-..+..+|+++=   .+|.+|.+|++.+|+|+|.+|-....   -..-+..+...|+.
T Consensus       581 r~~f~~~~~~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~---sR~~~s~l~~~gl~  648 (723)
T 4gyw_A          581 RIIFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLA---SRVAASQLTCLGCL  648 (723)
T ss_dssp             GEEEEECCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGG---GTHHHHHHHHHTCG
T ss_pred             eEEECCCCCHHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCcc---HhHHHHHHHHcCCc
Confidence            567777664  33456788999985   67889999999999999999865322   23455666666776

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=92.56  E-value=0.11  Score=43.58  Aligned_cols=91  Identities=11%  Similarity=0.179  Sum_probs=59.8

Q ss_pred             hhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHH---H---HHHHhCCCEEEeChHHHHHHHHhcc
Q 033065           27 SSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSEL---A---EELADRKHLYCAHPQSLHQVIVGMD  100 (128)
Q Consensus        27 ~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~n---A---~~l~~~g~~~~~~~~~l~~~i~~l~  100 (128)
                      +++.++|..||++||=-. +.+.|.+..++|+|+....    -++...   .   ........-++.+.++|.++|.+..
T Consensus       607 ~di~~ll~~aD~lITDyS-Sv~fD~~~l~kPiif~~~D----~~~Y~~~~rg~y~d~~~~~pg~~~~~~~eL~~~i~~~~  681 (729)
T 3l7i_A          607 NDVSELFLISDCLITDYS-SVMFDYGILKRPQFFFAYD----IDKYDKGLRGFYMNYMEDLPGPIYTEPYGLAKELKNLD  681 (729)
T ss_dssp             SCHHHHHHTCSEEEESSC-THHHHHGGGCCCEEEECTT----TTTTTSSCCSBSSCTTSSSSSCEESSHHHHHHHHTTHH
T ss_pred             cCHHHHHHHhCEEEeech-HHHHhHHhhCCCEEEecCC----HHHHhhccCCcccChhHhCCCCeECCHHHHHHHHhhhh
Confidence            468999999999999988 5999999999999999764    122111   0   0001112224458899998887654


Q ss_pred             h-------------hcCCCCC-CCChHHHHHHHHHh
Q 033065          101 L-------------KSLLPYQ-PGDATPVAKLINRF  122 (128)
Q Consensus       101 ~-------------~~~~~~~-~~~~~~i~~~i~~~  122 (128)
                      .             +..-.+. ..+++++++.|.+.
T Consensus       682 ~~~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~  717 (729)
T 3l7i_A          682 KVQQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKD  717 (729)
T ss_dssp             HHHHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHhCCccCChHHHHHHHHHHhc
Confidence            2             1122233 35688888888764

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*

Probab=92.28  E-value=0.15  Score=38.04  Aligned_cols=34  Identities=32%  Similarity=0.452  Sum_probs=28.3

Q ss_pred             hhhHHHHHhhccEEEec-CchHHHHHHHHhCCCEEEE
Q 033065           26 SSSIADHLSSASLVISH-AGSGSIFETLRLGKPLIVV   61 (128)
Q Consensus        26 ~~~~~~~~~~adlvIth-aG~~Ti~E~l~~g~P~I~v   61 (128)
                      ..++..+++.||++||- .|...+  |.++|+|+|.+
T Consensus       244 l~el~ali~~a~l~I~~DSG~~Hl--Aaa~g~P~v~l  278 (326)
T 2gt1_A          244 LEGVARVLAGAKFVVSVDTGLSHL--TAALDRPNITV  278 (326)
T ss_dssp             HHHHHHHHHTCSEEEEESSHHHHH--HHHTTCCEEEE
T ss_pred             HHHHHHHHHhCCEEEecCCcHHHH--HHHcCCCEEEE
Confidence            35788999999999999 765444  77799999988

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=91.24  E-value=0.2  Score=38.35  Aligned_cols=33  Identities=18%  Similarity=0.506  Sum_probs=28.1

Q ss_pred             hhHHHHHhhccEEEec-CchHHHHHHHHhCCCEEEE
Q 033065           27 SSIADHLSSASLVISH-AGSGSIFETLRLGKPLIVV   61 (128)
Q Consensus        27 ~~~~~~~~~adlvIth-aG~~Ti~E~l~~g~P~I~v   61 (128)
                      .++..+|+.||++|+. +|...+  |.++|+|+|.+
T Consensus       253 ~e~~ali~~a~~~i~~DsG~~Hl--Aaa~g~P~v~l  286 (349)
T 3tov_A          253 GPLAAAMNRCNLLITNDSGPMHV--GISQGVPIVAL  286 (349)
T ss_dssp             HHHHHHHHTCSEEEEESSHHHHH--HHTTTCCEEEE
T ss_pred             HHHHHHHHhCCEEEECCCCHHHH--HHhcCCCEEEE
Confidence            5688999999999998 665444  88999999998

>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1

Probab=91.15  E-value=1.2  Score=31.57  Aligned_cols=69  Identities=14%  Similarity=0.119  Sum_probs=42.3

Q ss_pred             HHHHhhccEEE-ecCchHHHHHHHH---------hCCCEEEEeCCCCCCchHHHHHHHHHhCCCE---------EEeChH
Q 033065           30 ADHLSSASLVI-SHAGSGSIFETLR---------LGKPLIVVVNEDLMDNHQSELAEELADRKHL---------YCAHPQ   90 (128)
Q Consensus        30 ~~~~~~adlvI-thaG~~Ti~E~l~---------~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~---------~~~~~~   90 (128)
                      ..+...||.+| --+|.||+.|+..         +++|++++-.....+. =...-+.+.+.|..         +.-+++
T Consensus        92 ~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~-l~~~l~~~~~~Gfi~~~~~~~~~~~~~~~  170 (191)
T 1t35_A           92 AKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEP-MMKMVKYSIQEGFSNESHLKLIHSSSRPD  170 (191)
T ss_dssp             HHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHH-HHHHHHHHHHTTSSCTTHHHHEEEESSHH
T ss_pred             HHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccch-HHHHHHHHHHCCCCCHHHcCeEEEeCCHH
Confidence            34566788554 4677899887652         6899999954211121 12222566777632         224788


Q ss_pred             HHHHHHHhc
Q 033065           91 SLHQVIVGM   99 (128)
Q Consensus        91 ~l~~~i~~l   99 (128)
                      ++.+.+++.
T Consensus       171 e~~~~l~~~  179 (191)
T 1t35_A          171 ELIEQMQNY  179 (191)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHHh
Confidence            888877764

>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1

Probab=91.07  E-value=0.6  Score=33.40  Aligned_cols=34  Identities=29%  Similarity=0.400  Sum_probs=24.2

Q ss_pred             HHHhhccE-EEecCchHHHHHH---HHhCCCEEEEeCC
Q 033065           31 DHLSSASL-VISHAGSGSIFET---LRLGKPLIVVVNE   64 (128)
Q Consensus        31 ~~~~~adl-vIthaG~~Ti~E~---l~~g~P~I~vP~~   64 (128)
                      .+...||. |+--+|.||+.|+   +.+++|+++++..
T Consensus       114 ~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~~  151 (195)
T 1rcu_A          114 VLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRGT  151 (195)
T ss_dssp             HHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETTS
T ss_pred             HHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECCC
Confidence            45566774 4456778887765   5699999999654

>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}

Probab=90.48  E-value=2.5  Score=30.02  Aligned_cols=66  Identities=20%  Similarity=0.177  Sum_probs=40.4

Q ss_pred             HHHHHhhccEEEe-cCchHHHHHHHH---------hCCCEEEEeC-CCCCCchHHHHHHHHHhCCCE---------EEeC
Q 033065           29 IADHLSSASLVIS-HAGSGSIFETLR---------LGKPLIVVVN-EDLMDNHQSELAEELADRKHL---------YCAH   88 (128)
Q Consensus        29 ~~~~~~~adlvIt-haG~~Ti~E~l~---------~g~P~I~vP~-~~~~~~~Q~~nA~~l~~~g~~---------~~~~   88 (128)
                      -..++..||.+|. -+|.||+-|+..         ++||++++=. ..+  ++=...-+.+.+.|..         +.-+
T Consensus       102 k~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw--~~l~~~l~~~~~~Gfi~~~~~~~i~~~d~  179 (189)
T 3sbx_A          102 KQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHF--DGLRAWLSELADTGYVSRTAMERLIVVDN  179 (189)
T ss_dssp             HHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTT--HHHHHHHHHHHHTTSSCHHHHHHEEEESS
T ss_pred             HHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCCccc--hHHHHHHHHHHHCCCCCHHHcCeEEEeCC
Confidence            4466788996665 567899999863         5899999943 222  1222233566777653         1126


Q ss_pred             hHHHHHHH
Q 033065           89 PQSLHQVI   96 (128)
Q Consensus        89 ~~~l~~~i   96 (128)
                      ++++.+.|
T Consensus       180 ~ee~~~~l  187 (189)
T 3sbx_A          180 LDDALQAC  187 (189)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            66665554

>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A

Probab=90.35  E-value=1.4  Score=31.94  Aligned_cols=68  Identities=10%  Similarity=0.165  Sum_probs=41.0

Q ss_pred             HHHhhccEE-EecCchHHHHHHHH---------hCCCEEEEeCCCCCCchHHHHHHHHHhCCC---------EEEeChHH
Q 033065           31 DHLSSASLV-ISHAGSGSIFETLR---------LGKPLIVVVNEDLMDNHQSELAEELADRKH---------LYCAHPQS   91 (128)
Q Consensus        31 ~~~~~adlv-IthaG~~Ti~E~l~---------~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~---------~~~~~~~~   91 (128)
                      .+...||.+ +--+|.||+-|+.-         +++|++++-.....+. =...-+.+.+.|.         .++-++++
T Consensus       105 ~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~-l~~~l~~~~~~Gfi~~~~~~~~~~~d~~ee  183 (215)
T 2a33_A          105 EMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNS-LLSFIDKAVEEGFISPTAREIIVSAPTAKE  183 (215)
T ss_dssp             HHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHH-HHHHHHHHHHHTSSCHHHHTTEEEESSHHH
T ss_pred             HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHH-HHHHHHHHHHcCCCCHHHCCeEEEeCCHHH
Confidence            345567754 45788999988873         3899999954311121 1222345555554         23348888


Q ss_pred             HHHHHHhc
Q 033065           92 LHQVIVGM   99 (128)
Q Consensus        92 l~~~i~~l   99 (128)
                      +.+.|.+.
T Consensus       184 ~~~~l~~~  191 (215)
T 2a33_A          184 LVKKLEEY  191 (215)
T ss_dssp             HHHHHHC-
T ss_pred             HHHHHHHh
Confidence            88888754

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=90.26  E-value=0.51  Score=38.32  Aligned_cols=45  Identities=13%  Similarity=0.090  Sum_probs=34.7

Q ss_pred             ccEEEEeCh--hhHHHHHhhccEEEec-----CchHHHHHHHHhCCCEEEEeC
Q 033065           18 LAVDCFTFS--SSIADHLSSASLVISH-----AGSGSIFETLRLGKPLIVVVN   63 (128)
Q Consensus        18 ~~~~v~~f~--~~~~~~~~~adlvIth-----aG~~Ti~E~l~~g~P~I~vP~   63 (128)
                      .++.+....  +++..+++.||++|.=     .| .+++||+++|+|+|.-..
T Consensus       382 ~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fg-l~~lEAma~G~PvI~s~~  433 (536)
T 3vue_A          382 GKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCG-LIQLQGMRYGTPCACAST  433 (536)
T ss_dssp             TTEEEECSCCHHHHHHHHHHCSEEEECCSCCSSC-SHHHHHHHTTCCEEECSC
T ss_pred             CceEEEEeccHHHHHHHHHhhheeecccccCCCC-HHHHHHHHcCCCEEEcCC
Confidence            456665554  4578899999999863     35 589999999999998754

>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A

Probab=90.22  E-value=1.4  Score=30.89  Aligned_cols=64  Identities=13%  Similarity=0.175  Sum_probs=37.6

Q ss_pred             HHhhccEE-EecCchHHHHHHH---HhCCCEEEEeCCCCCCchHHHHHHHHHhCCCE-EEeChHHHHHHHHhcc
Q 033065           32 HLSSASLV-ISHAGSGSIFETL---RLGKPLIVVVNEDLMDNHQSELAEELADRKHL-YCAHPQSLHQVIVGMD  100 (128)
Q Consensus        32 ~~~~adlv-IthaG~~Ti~E~l---~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~-~~~~~~~l~~~i~~l~  100 (128)
                      +...||.+ +--+|.||+.|+.   ..++|++++|.-    +-....... ...... +.-+++++.+.+.+..
T Consensus       104 m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~----~~~~gfi~~-~~~~~i~~~~~~~e~~~~l~~~~  172 (176)
T 2iz6_A          104 NALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ----PEAEKFFTS-LDAGLVHVAADVAGAIAAVKQLL  172 (176)
T ss_dssp             CGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC----HHHHHHHHH-HCTTTEEEESSHHHHHHHHHHHH
T ss_pred             HHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc----ccccccCCh-hhcCeEEEcCCHHHHHHHHHHHH
Confidence            34556644 4457788877655   599999999872    111111111 112333 3348888888877654

>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}

Probab=89.70  E-value=2.1  Score=30.62  Aligned_cols=76  Identities=12%  Similarity=0.055  Sum_probs=42.6

Q ss_pred             EEEeChh-hHHHHHhhccEEEe-cCchHHHHHHHH---------hCCCEEEEeCCCCCCchHHHHHHHHHhCCCE-----
Q 033065           21 DCFTFSS-SIADHLSSASLVIS-HAGSGSIFETLR---------LGKPLIVVVNEDLMDNHQSELAEELADRKHL-----   84 (128)
Q Consensus        21 ~v~~f~~-~~~~~~~~adlvIt-haG~~Ti~E~l~---------~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~-----   84 (128)
                      .++++.. .-..++..||.+|. =+|.||+.|+..         +++|++++-..... ++=...-+.+.+.|..     
T Consensus       102 i~~~~~~~Rk~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~~gfw-~~l~~~l~~~~~~Gfi~~~~~  180 (199)
T 3qua_A          102 IVTDTMRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDPFGHY-DGLLTWLRGLVPTGYVSQRAM  180 (199)
T ss_dssp             EEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTSTT-HHHHHHHHHTTTTTSSCHHHH
T ss_pred             EEcCCHHHHHHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcCCccc-hHHHHHHHHHHHCCCCCHHHC
Confidence            3444433 33456778886665 567899988863         59999999542211 1222233455566643     


Q ss_pred             ----EEeChHHHHHHHH
Q 033065           85 ----YCAHPQSLHQVIV   97 (128)
Q Consensus        85 ----~~~~~~~l~~~i~   97 (128)
                          +.-|++++.+.|+
T Consensus       181 ~~i~~~d~~~e~~~~l~  197 (199)
T 3qua_A          181 DSLVVVDNVEAALEACA  197 (199)
T ss_dssp             HTSEEESSHHHHHHHHS
T ss_pred             CeEEEeCCHHHHHHHHh
Confidence                1225666655543

>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*

Probab=89.15  E-value=0.65  Score=32.37  Aligned_cols=37  Identities=24%  Similarity=0.429  Sum_probs=30.4

Q ss_pred             ChhhHHHHHhhccEEEe-----cCchHHHHHH---HHhCCCEEEEe
Q 033065           25 FSSSIADHLSSASLVIS-----HAGSGSIFET---LRLGKPLIVVV   62 (128)
Q Consensus        25 f~~~~~~~~~~adlvIt-----haG~~Ti~E~---l~~g~P~I~vP   62 (128)
                      |..++ +.|.+||+||.     -.-.||.+|.   .+.|||++.+.
T Consensus        72 ~~~D~-~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~  116 (167)
T 1s2d_A           72 YQNDL-TGISNATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILVP  116 (167)
T ss_dssp             HHHHH-HHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred             HHHHH-HHHHhCCEEEEECCCCCCCCCceeehhhHhhCCCeEEEEE
Confidence            33454 56899999998     7889999996   47899999996

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*

Probab=88.99  E-value=0.42  Score=40.71  Aligned_cols=37  Identities=14%  Similarity=0.067  Sum_probs=31.3

Q ss_pred             hHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCC
Q 033065           28 SIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNE   64 (128)
Q Consensus        28 ~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~   64 (128)
                      ++.++|+.||++|.=+    -..+++||+++|+|+|.--..
T Consensus       511 d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g  551 (725)
T 3nb0_A          511 DYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVS  551 (725)
T ss_dssp             CHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred             HHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence            4889999999999764    235999999999999998654

>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}

Probab=87.65  E-value=0.43  Score=33.92  Aligned_cols=30  Identities=13%  Similarity=0.231  Sum_probs=25.7

Q ss_pred             hhccEEEecCchHHHHHHHHhCCCEEEEeCC
Q 033065           34 SSASLVISHAGSGSIFETLRLGKPLIVVVNE   64 (128)
Q Consensus        34 ~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~   64 (128)
                      ..+|++|||||......-. .++|+|-+|..
T Consensus        50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s   79 (196)
T 2q5c_A           50 DEVDAIISRGATSDYIKKS-VSIPSISIKVT   79 (196)
T ss_dssp             TTCSEEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred             CCCeEEEECChHHHHHHHh-CCCCEEEEcCC
Confidence            4689999999998888754 78999999986

>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1

Probab=86.73  E-value=0.22  Score=32.64  Aligned_cols=63  Identities=19%  Similarity=0.177  Sum_probs=44.3

Q ss_pred             HHHhhccEEEecCchHH---------HHHHHHhCCCEEEE-eCCCCCCchHHHHHHHHHhCCCEEE-eChHHHHHHHHhc
Q 033065           31 DHLSSASLVISHAGSGS---------IFETLRLGKPLIVV-VNEDLMDNHQSELAEELADRKHLYC-AHPQSLHQVIVGM   99 (128)
Q Consensus        31 ~~~~~adlvIthaG~~T---------i~E~l~~g~P~I~v-P~~~~~~~~Q~~nA~~l~~~g~~~~-~~~~~l~~~i~~l   99 (128)
                      +-|..|++||.-+|..|         +-.|...|+|+|.| |..      +...-..+.+.+-.++ -+.+.+.++|...
T Consensus        34 ~~I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g------~~~~P~~l~~~a~~iV~Wn~~~I~~aI~~~  107 (111)
T 1eiw_A           34 ATPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYG------LENVPPELEAVSSEVVGWNPHCIRDALEDA  107 (111)
T ss_dssp             CCSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSS------SSCCCTTHHHHCSEEECSCHHHHHHHHHHH
T ss_pred             CccccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCC------CCcCCHHHHhhCceeccCCHHHHHHHHHhc
Confidence            56889999999999988         45566799999999 442      1112233555555555 3888888888765

>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*

Probab=86.45  E-value=1.1  Score=30.97  Aligned_cols=67  Identities=15%  Similarity=0.237  Sum_probs=42.9

Q ss_pred             HHHhhccEEEecC---chHHHHHH---HHhCCCEEEEeCCCCCCchHHHHHHHHHhCCC---E--EEeChHHHHHHHHhc
Q 033065           31 DHLSSASLVISHA---GSGSIFET---LRLGKPLIVVVNEDLMDNHQSELAEELADRKH---L--YCAHPQSLHQVIVGM   99 (128)
Q Consensus        31 ~~~~~adlvItha---G~~Ti~E~---l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~---~--~~~~~~~l~~~i~~l   99 (128)
                      ++|.+||+||.-.   ..||.+|+   .+.|||++++-...   .+-..|+. +.....   .  +.-+.++|.+.|.+.
T Consensus        73 ~~i~~aD~vva~~~~~d~Gt~~EiGyA~algKPVi~l~~~~---~~~~~n~M-~~g~~~~~~~~~~~y~~~el~~~l~~~  148 (165)
T 2khz_A           73 NWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQ---SGRVLSAM-IRGAADGSRFQVWDYAEGEVETMLDRY  148 (165)
T ss_dssp             HHHHHCSEEEEECSSCCHHHHHHHHHHHHTCSSEEEEECTT---TTCCCCHH-HHHTCCSSSEEEEECCTTTHHHHHHHH
T ss_pred             HHHHhCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEcCC---CCCcchhh-hcccCccceeEEEecCHHHHHHHHHHH
Confidence            7899999997654   78999996   46899999984431   11112222 333322   1  112777888877777


Q ss_pred             ch
Q 033065          100 DL  101 (128)
Q Consensus       100 ~~  101 (128)
                      ++
T Consensus       149 ~~  150 (165)
T 2khz_A          149 FE  150 (165)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1

Probab=85.87  E-value=2.7  Score=30.35  Aligned_cols=66  Identities=15%  Similarity=0.099  Sum_probs=39.0

Q ss_pred             HHHhhccEE-EecCchHHHHHHHH----------hCCCEEEEeCCCCCCchHHHHHHHHHhCCC---------EEEeChH
Q 033065           31 DHLSSASLV-ISHAGSGSIFETLR----------LGKPLIVVVNEDLMDNHQSELAEELADRKH---------LYCAHPQ   90 (128)
Q Consensus        31 ~~~~~adlv-IthaG~~Ti~E~l~----------~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~---------~~~~~~~   90 (128)
                      .+...||.+ +--||.||+.|+..          .++|++++-...+ + +=...-+.+.+.|.         .++-+++
T Consensus       127 ~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~~~w-~-~l~~~l~~~~~~Gfi~~~~~~~~~~~~~~~  204 (217)
T 1wek_A          127 LFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDRGYW-E-GLVRWLAFLRDQKAVGPEDLQLFRLTDEPE  204 (217)
T ss_dssp             HHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECHHHH-H-HHHHHHHHHHHTTSSCTTGGGGSEEESCHH
T ss_pred             HHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCcccc-h-hHHHHHHHHHHCCCCCHHHcCeEEEeCCHH
Confidence            345567754 44678999988763          3699999843211 1 11112255666664         2334788


Q ss_pred             HHHHHHHh
Q 033065           91 SLHQVIVG   98 (128)
Q Consensus        91 ~l~~~i~~   98 (128)
                      ++.+.+.+
T Consensus       205 e~~~~l~~  212 (217)
T 1wek_A          205 EVVQALKA  212 (217)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHH
Confidence            87777664

>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*

Probab=85.60  E-value=1.3  Score=30.45  Aligned_cols=34  Identities=26%  Similarity=0.545  Sum_probs=28.1

Q ss_pred             HHHhhccEEEec---CchHHHHHH---HHhCCCEEEEeCC
Q 033065           31 DHLSSASLVISH---AGSGSIFET---LRLGKPLIVVVNE   64 (128)
Q Consensus        31 ~~~~~adlvIth---aG~~Ti~E~---l~~g~P~I~vP~~   64 (128)
                      +.+++||+||.-   +..||.+|.   .+.|||++++-.+
T Consensus        64 ~~i~~aD~vvA~l~~~d~Gt~~EiG~A~algkPV~~l~~~  103 (152)
T 4fyk_A           64 NWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRP  103 (152)
T ss_dssp             HHHHHCSEEEEECSSCCHHHHHHHHHHHHTTCCEEEEECG
T ss_pred             HHHHHCCEEEEeCCCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence            679999988874   578999996   5789999998654

>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0

Probab=85.25  E-value=4.2  Score=29.24  Aligned_cols=51  Identities=20%  Similarity=0.300  Sum_probs=37.8

Q ss_pred             cc-EEEecCchHHHH----------------HHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 033065           36 AS-LVISHAGSGSIF----------------ETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC   86 (128)
Q Consensus        36 ad-lvIthaG~~Ti~----------------E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~   86 (128)
                      +| +||.=|-++|+.                .++..++|+|++|...+...-..+|-..+.+.|+.++
T Consensus        95 aD~mvIaPaSanTlakiA~GiaDnLltraadv~Lk~~~plvl~Paem~~~~~~~~Nm~~L~~~G~~ii  162 (209)
T 3zqu_A           95 PNAMVICPCSTGTLSAVATGACNNLIERAADVALKERRPLVLVPREAPFSSIHLENMLKLSNLGAVIL  162 (209)
T ss_dssp             CCEEEEEEECHHHHHHHHHTCCCSHHHHHHHHHHHHTCCEEEEECCSSCCHHHHHHHHHHHHHTCEEC
T ss_pred             cCEEEEeeCCHhHHHHHHccccCcHHHHHHHHHHhcCCcEEEEEcccccCHHHHHHHHHHHHCCCEEe
Confidence            56 567777777765                3445699999999965544455678899999999875

>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1

Probab=84.09  E-value=0.78  Score=33.45  Aligned_cols=29  Identities=17%  Similarity=0.425  Sum_probs=25.1

Q ss_pred             hccEEEecCchHHHHHHHHhCCCEEEEeCC
Q 033065           35 SASLVISHAGSGSIFETLRLGKPLIVVVNE   64 (128)
Q Consensus        35 ~adlvIthaG~~Ti~E~l~~g~P~I~vP~~   64 (128)
                      .+|++||+||........ .++|+|-|+..
T Consensus        63 ~~dVIISRGgta~~Lr~~-~~iPVV~I~vs   91 (225)
T 2pju_A           63 RCDAIIAAGSNGAYLKSR-LSVPVILIKPS   91 (225)
T ss_dssp             CCSEEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred             CCeEEEeCChHHHHHHhh-CCCCEEEecCC
Confidence            389999999998888754 78999999986

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=84.03  E-value=4.6  Score=30.05  Aligned_cols=97  Identities=13%  Similarity=0.111  Sum_probs=54.9

Q ss_pred             hhhHHHHHhhccEEEecCchHH----HHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C--hH---HHH
Q 033065           26 SSSIADHLSSASLVISHAGSGS----IFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---H--PQ---SLH   93 (128)
Q Consensus        26 ~~~~~~~~~~adlvIthaG~~T----i~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~--~~---~l~   93 (128)
                      .+++++++..+|+||--.-...    +..++..|+|+|+-...  .+.+|...-+.+.+....++.   +  ..   .|.
T Consensus        64 ~~dl~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTTG--~s~~~~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~  141 (272)
T 4f3y_A           64 TDDIERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTG--FSEPQKAQLRAAGEKIALVFSANMSVGVNVTMKLL  141 (272)
T ss_dssp             BCCHHHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCC--CCHHHHHHHHHHTTTSEEEECSCCCHHHHHHHHHH
T ss_pred             cCCHHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCC--CCHHHHHHHHHHhccCCEEEECCCCHHHHHHHHHH
Confidence            3568889999999995444333    44577899998875443  245666555555555333332   2  11   222


Q ss_pred             HHHHhcch-----------hc-CCCCCCCChHHHHHHHHHhcC
Q 033065           94 QVIVGMDL-----------KS-LLPYQPGDATPVAKLINRFLG  124 (128)
Q Consensus        94 ~~i~~l~~-----------~~-~~~~~~~~~~~i~~~i~~~~g  124 (128)
                      +...+.+.           .. ....|+..+-.+++.|.+.++
T Consensus       142 ~~aa~~l~~~~diei~E~HH~~K~DaPSGTA~~la~~i~~~~~  184 (272)
T 4f3y_A          142 EFAAKQFAQGYDIEIIEAHHRHKVDAPSGTALMMGETIAAATG  184 (272)
T ss_dssp             HHHHHHTSSSCEEEEEEEECTTCCSSSCHHHHHHHHHHHHTTT
T ss_pred             HHHHHhcCcCCCEEEEEecCCCCCCCCCHHHHHHHHHHHHHhC
Confidence            22222221           12 223455567788888877554

>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*

Probab=83.52  E-value=1.4  Score=30.40  Aligned_cols=34  Identities=21%  Similarity=0.345  Sum_probs=28.0

Q ss_pred             HHHHhhccEEEec--------CchHHHHHHH---HhCCCEEEEeC
Q 033065           30 ADHLSSASLVISH--------AGSGSIFETL---RLGKPLIVVVN   63 (128)
Q Consensus        30 ~~~~~~adlvIth--------aG~~Ti~E~l---~~g~P~I~vP~   63 (128)
                      -+.|.+||+||.-        .-.||.+|+-   +.|||+|++-.
T Consensus        62 ~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~~  106 (161)
T 2f62_A           62 IQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFTS  106 (161)
T ss_dssp             HHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred             HHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEEc
Confidence            4889999999877        4578999964   78999999853

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*

Probab=82.90  E-value=3.6  Score=32.92  Aligned_cols=72  Identities=6%  Similarity=-0.033  Sum_probs=45.9

Q ss_pred             EEEE-eCh--hhHHHHHhhccEEEecC---ch-HHHHHHHHhCC-----CEEEEeCCCCCCchHHHHHHHHHhCCCEEEe
Q 033065           20 VDCF-TFS--SSIADHLSSASLVISHA---GS-GSIFETLRLGK-----PLIVVVNEDLMDNHQSELAEELADRKHLYCA   87 (128)
Q Consensus        20 ~~v~-~f~--~~~~~~~~~adlvItha---G~-~Ti~E~l~~g~-----P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~   87 (128)
                      ++++ +++  +++..+|+.||++|.-+   |. .++.|++++|+     |+|+-.....  .++.       . ++.++.
T Consensus       333 v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~--~~~l-------~-~g~lv~  402 (482)
T 1uqt_A          333 LYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA--ANEL-------T-SALIVN  402 (482)
T ss_dssp             EEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG--GGTC-------T-TSEEEC
T ss_pred             EEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC--HHHh-------C-CeEEEC
Confidence            5543 444  56899999999988643   22 48999999998     4444333221  1222       1 333332


Q ss_pred             --ChHHHHHHHHhcch
Q 033065           88 --HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 --~~~~l~~~i~~l~~  101 (128)
                        +++.++++|.++++
T Consensus       403 p~d~~~lA~ai~~lL~  418 (482)
T 1uqt_A          403 PYDRDEVAAALDRALT  418 (482)
T ss_dssp             TTCHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHc
Confidence              77889999988764

>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}

Probab=80.17  E-value=2  Score=31.87  Aligned_cols=33  Identities=18%  Similarity=0.264  Sum_probs=27.3

Q ss_pred             HHHhhccEEEecCchHHHHHHHHh----CCCEEEEeC
Q 033065           31 DHLSSASLVISHAGSGSIFETLRL----GKPLIVVVN   63 (128)
Q Consensus        31 ~~~~~adlvIthaG~~Ti~E~l~~----g~P~I~vP~   63 (128)
                      ..-..+|+||+-||=||+.+++..    ++|++.|+.
T Consensus        59 ~~~~~~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~   95 (292)
T 2an1_A           59 EIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINR   95 (292)
T ss_dssp             HHHHHCSEEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred             hcccCCCEEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence            345678999999999999999843    788888874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	128
d1rrva_	401	c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am	0.003

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

 Score = 33.9 bits (76), Expect = 0.003
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 4/53 (7%)

Query: 30  ADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRK 82
                  + VI H  +G+     R G P +V+      +  Q   A  +A   
Sbjct: 297 QALFRRVAAVIHHGSAGTEHVATRAGVPQLVIP----RNTDQPYFAGRVAALG 345

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	128
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	99.87
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	99.75
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	99.74
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	99.73
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	99.63
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	99.63
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	99.62
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	99.57
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	97.91
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	97.75
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	97.56
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	97.09
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	96.91
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	96.74
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	95.67
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	95.38
d1rcua_	170	Hypothetical protein TM1055 {Thermotoga maritima [	95.32
d1t35a_	179	Hypothetical protein YvdD {Bacillus subtilis [TaxI	92.23
d2f62a1	152	Nucleoside 2-deoxyribosyltransferase {Trypanosoma	91.84
d1f8ya_	156	Nucleoside 2-deoxyribosyltransferase {Lactobacillu	91.24
d1s2da_	167	Purine transdeoxyribosylase {Lactobacillus helveti	91.05
d2q4oa1	183	Hypothetical protein At2g37210/T2N18.3 {Thale cres	89.69
d1weka_	208	Hypothetical protein TT1465 (TTHA1644) {Thermus th	89.02
d1sbza_	186	Probable aromatic acid decarboxylase Pad1 {Escheri	88.69
d1eiwa_	111	Hypothetical protein MTH538 {Archaeon Methanobacte	87.1
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	86.85
d1ydhb_	181	Hypothetical protein At5g11950 {Thale cress (Arabi	86.81

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=4.5e-22  Score=149.35  Aligned_cols=107  Identities=18%  Similarity=0.175  Sum_probs=89.9

Q ss_pred             CcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChH
Q 033065           16 GLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQ   90 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~   90 (128)
                      ...++++++|+++|.++|+.||++|||||++|++|++++|+|+|++|++. .++||..||+++++.|+++++     +++
T Consensus       229 ~~~~~~v~~f~~~~~~lm~~adl~It~~G~~T~~Eal~~g~P~I~iP~~~-~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e  307 (351)
T d1f0ka_         229 GQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQH-KDRQQYWNALPLEKAGAAKIIEQPQLSVD  307 (351)
T ss_dssp             TCTTSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCC-TTCHHHHHHHHHHHTTSEEECCGGGCCHH
T ss_pred             ccccceeeeehhhHHHHHHhCchhhccccchHHHHHHHhCCceeeeeccc-CCchHHHHHHHHHHCCCEEEechhhCCHH
Confidence            34578999999999999999999999999999999999999999999863 467999999999999999875     578


Q ss_pred             HHHHHHHhcchh--------cCCCCCCCChHHHHHHHHHhc
Q 033065           91 SLHQVIVGMDLK--------SLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        91 ~l~~~i~~l~~~--------~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      .|.++|.++...        .++...++++++|++.|.++.
T Consensus       308 ~l~~~l~~l~~~~~~~~~~~~~~~~~~~~a~~i~~~i~~l~  348 (351)
T d1f0ka_         308 AVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRVA  348 (351)
T ss_dssp             HHHHHHHTCCHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhCHHHHHHHHHHHHccCCccHHHHHHHHHHHHH
Confidence            888888766421        233344577899999998864

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.75  E-value=2.9e-18  Score=129.71  Aligned_cols=103  Identities=16%  Similarity=0.070  Sum_probs=87.9

Q ss_pred             CcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChH
Q 033065           16 GLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQ   90 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~   90 (128)
                      ...|+++.+|+|+ .+++..+|++|||||.||++|++++|+|+|++|..    .||..||+++++.|+++.+     +++
T Consensus       284 ~~~~v~~~~~~p~-~~ll~~~~~~I~hgG~~t~~Eal~~GvP~l~~P~~----~DQ~~na~~v~~~G~g~~l~~~~~~~~  358 (401)
T d1rrva_         284 DRDDCFAIDEVNF-QALFRRVAAVIHHGSAGTEHVATRAGVPQLVIPRN----TDQPYFAGRVAALGIGVAHDGPTPTFE  358 (401)
T ss_dssp             CCTTEEEESSCCH-HHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCS----BTHHHHHHHHHHHTSEEECSSSCCCHH
T ss_pred             CCCCEEEEeccCc-HHHhhhccEEEecCCchHHHHHHHhCCCEEEeccc----ccHHHHHHHHHHCCCEEEcCcCCCCHH
Confidence            4568999999984 79999999999999999999999999999999986    6899999999999999874     689


Q ss_pred             HHHHHHHhcchh--------cCCCCCCCChHHHHHHHHHhc
Q 033065           91 SLHQVIVGMDLK--------SLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        91 ~l~~~i~~l~~~--------~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      .|+++|+++++.        ..+....+++...++.|.+.+
T Consensus       359 ~L~~ai~~vl~~~~r~~a~~~~~~~~~~g~~~aa~~ie~~~  399 (401)
T d1rrva_         359 SLSAALTTVLAPETRARAEAVAGMVLTDGAAAAADLVLAAV  399 (401)
T ss_dssp             HHHHHHHHHTSHHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHh
Confidence            999999998642        122334467888999988765

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.74  E-value=2.7e-18  Score=129.45  Aligned_cols=107  Identities=16%  Similarity=0.064  Sum_probs=87.9

Q ss_pred             CcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChH
Q 033065           16 GLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQ   90 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~   90 (128)
                      ...|+.+.+|++ +.++|..+|++|||||+||++|++++|+|+|++|.......||..||+++++.|+++.+     +++
T Consensus       268 ~~~~v~i~~~~p-~~~ll~~a~~~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~~  346 (391)
T d1pn3a_         268 DGADCFVVGEVN-LQELFGRVAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTID  346 (391)
T ss_dssp             CCTTCCEESSCC-HHHHHTTSSCEEEESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSCCHH
T ss_pred             CCCCEEEecccC-HHHHHhhccEEEecCchHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCCCCHH
Confidence            456899999998 58999999999999999999999999999999999754446799999999999999764     689


Q ss_pred             HHHHHHHhcchh--------cCCCCCCCChHHHHHHHHHhc
Q 033065           91 SLHQVIVGMDLK--------SLLPYQPGDATPVAKLINRFL  123 (128)
Q Consensus        91 ~l~~~i~~l~~~--------~~~~~~~~~~~~i~~~i~~~~  123 (128)
                      +|+++|+++++.        ..+....++..+.++.|.+.+
T Consensus       347 ~l~~~i~~~l~~~~r~~a~~~a~~~~~~g~~~aa~~i~~~l  387 (391)
T d1pn3a_         347 SLSAALDTALAPEIRARATTVADTIRADGTTVAAQLLFDAV  387 (391)
T ss_dssp             HHHHHHHHHTSTTHHHHHHHHGGGSCSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            999999988642        111233466777888887664

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.73  E-value=6.1e-18  Score=127.16  Aligned_cols=81  Identities=17%  Similarity=0.111  Sum_probs=74.3

Q ss_pred             CcccEEEEeChhhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChH
Q 033065           16 GLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA-----HPQ   90 (128)
Q Consensus        16 ~~~~~~v~~f~~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~-----~~~   90 (128)
                      .+.|+++.+|.++ .++|..+|++|||||.||++|++++|+|+|++|..    .||..||+++++.|+++.+     +++
T Consensus       283 ~~~nv~~~~~~p~-~~~l~~~~~~V~hgG~~t~~Eal~~GvP~v~~P~~----~DQ~~na~~l~~~G~g~~l~~~~~~~~  357 (401)
T d1iira_         283 DGADCFAIGEVNH-QVLFGRVAAVIHHGGAGTTHVAARAGAPQILLPQM----ADQPYYAGRVAELGVGVAHDGPIPTFD  357 (401)
T ss_dssp             CGGGEEECSSCCH-HHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHHTSEEECSSSSCCHH
T ss_pred             CCCCEEEEeccCH-HHHHhhcCEEEecCCchHHHHHHHhCCCEEEcccc----ccHHHHHHHHHHCCCEEEcCcCCCCHH
Confidence            4668999999985 89999999999999999999999999999999985    6899999999999999874     789


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      +|+++|.++++
T Consensus       358 ~l~~ai~~~l~  368 (401)
T d1iira_         358 SLSAALATALT  368 (401)
T ss_dssp             HHHHHHHHHTS
T ss_pred             HHHHHHHHHhC
Confidence            99999999874

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=2.5e-16  Score=120.92  Aligned_cols=80  Identities=20%  Similarity=0.167  Sum_probs=71.1

Q ss_pred             cccEEEEeChhhHHHHH--hhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe------
Q 033065           17 LLAVDCFTFSSSIADHL--SSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD-RKHLYCA------   87 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~--~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~-~g~~~~~------   87 (128)
                      ..|+.+.+|.|+ .++|  .+++++|||||.||++|++++|+|+|++|..    .||..||+++++ .|+|+.+      
T Consensus       333 ~~nv~~~~w~Pq-~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~----~DQ~~nA~rv~e~lG~Gv~l~~~~~~  407 (471)
T d2vcha1         333 KRGFVIPFWAPQ-AQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLY----AEQKMNAVLLSEDIRAALRPRAGDDG  407 (471)
T ss_dssp             TTEEEEESCCCH-HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHTTCCEECCCCCTTS
T ss_pred             CCCeeecccCCH-HHHhcCccCCEEEecCCccHHHHHHHcCCCEEEcccc----cccHHHHHHHHHHheeEEEEecCCCC
Confidence            458999999998 5788  6899999999999999999999999999996    789999999955 6999753      


Q ss_pred             --ChHHHHHHHHhcch
Q 033065           88 --HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 --~~~~l~~~i~~l~~  101 (128)
                        +.++|+++|+++++
T Consensus       408 ~~t~~~l~~ai~~vl~  423 (471)
T d2vcha1         408 LVRREEVARVVKGLME  423 (471)
T ss_dssp             CCCHHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHhC
Confidence              77999999999874

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=99.63  E-value=4.4e-16  Score=119.39  Aligned_cols=79  Identities=14%  Similarity=0.053  Sum_probs=70.7

Q ss_pred             ccEEEEeChhhHHHHH--hhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe----ChH
Q 033065           18 LAVDCFTFSSSIADHL--SSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD-RKHLYCA----HPQ   90 (128)
Q Consensus        18 ~~~~v~~f~~~~~~~~--~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~-~g~~~~~----~~~   90 (128)
                      .|+.+..|.++ .+++  .+++++|||||.||++|++++|+|+|++|..    .||..||+++++ .|+|+.+    +.+
T Consensus       346 ~Nv~~~~~~Pq-~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P~~----~DQ~~na~rv~~~~G~G~~l~~~~t~~  420 (473)
T d2pq6a1         346 DRGLIASWCPQ-DKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFF----ADQPTDCRFICNEWEIGMEIDTNVKRE  420 (473)
T ss_dssp             TTEEEESCCCH-HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHTSCCEEECCSSCCHH
T ss_pred             CceEEeeeCCH-HHHhcCCcCcEEEecCCccHHHHHHHcCCCEEeccch----hhhHHHHHHHHHHcCeEEeeCCCcCHH
Confidence            48999999997 5677  7999999999999999999999999999996    789999999955 5999874    789


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      +|+++|++++.
T Consensus       421 ~l~~ai~~vl~  431 (473)
T d2pq6a1         421 ELAKLINEVIA  431 (473)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHHc
Confidence            99999999964

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=99.62  E-value=6.7e-16  Score=118.67  Aligned_cols=80  Identities=16%  Similarity=0.088  Sum_probs=71.4

Q ss_pred             cccEEEEeChhhHHHHH--hhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe-----C
Q 033065           17 LLAVDCFTFSSSIADHL--SSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD-RKHLYCA-----H   88 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~--~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~-~g~~~~~-----~   88 (128)
                      ..|+.+..|+++ .+++  .+++++|||||.||++|++++|+|+|++|..    .||..||.++++ .|+|+.+     +
T Consensus       318 ~~nv~~~~~~pq-~~lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~----~DQ~~na~rv~~~~G~G~~l~~~~~t  392 (450)
T d2c1xa1         318 RGYGMVVPWAPQ-AEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFF----GDQRLNGRMVEDVLEIGVRIEGGVFT  392 (450)
T ss_dssp             TTTEEEESCCCH-HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHTSCCEEECGGGSCC
T ss_pred             cccccccccCCh-HhhhccCceeEEEccCCccHHHHHHHcCCCEEecccc----cchHHHHHHHHHHcCcEEEecCCCcC
Confidence            347899999997 4666  7899999999999999999999999999986    789999999987 5999874     7


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      +++|.++|+++++
T Consensus       393 ~~~l~~ai~~vL~  405 (450)
T d2c1xa1         393 KSGLMSCFDQILS  405 (450)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc
Confidence            8999999999875

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=99.57  E-value=4.7e-15  Score=113.40  Aligned_cols=80  Identities=14%  Similarity=0.062  Sum_probs=67.5

Q ss_pred             ccEEEEeChhhH-HHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHH-HhCCCEEEe--------
Q 033065           18 LAVDCFTFSSSI-ADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEEL-ADRKHLYCA--------   87 (128)
Q Consensus        18 ~~~~v~~f~~~~-~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l-~~~g~~~~~--------   87 (128)
                      .|+.+..|.++- ...+.+|+++|||||.||++|++++|+|+|++|..    .||..||+++ ++.|+|+.+        
T Consensus       330 ~n~~v~~~~pq~~~l~~p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~----~DQ~~nA~rlve~~G~G~~l~~~~~~~~  405 (461)
T d2acva1         330 GKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIY----AEQQLNAFRLVKEWGVGLGLRVDYRKGS  405 (461)
T ss_dssp             CSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCS----TTHHHHHHHHHHTSCCEEESCSSCCTTC
T ss_pred             CCeEEEecCCHHHHHhcccCCEEEecCCccHHHHHHHcCCCEEeCCcc----cchHHHHHHHHHHhCceEEeeccccccC
Confidence            366778887652 23458999999999999999999999999999996    7899999998 567988753        


Q ss_pred             ---ChHHHHHHHHhcch
Q 033065           88 ---HPQSLHQVIVGMDL  101 (128)
Q Consensus        88 ---~~~~l~~~i~~l~~  101 (128)
                         |.++|+++|+++++
T Consensus       406 ~~~t~~~l~~a~~~vl~  422 (461)
T d2acva1         406 DVVAAEEIEKGLKDLMD  422 (461)
T ss_dssp             CCCCHHHHHHHHHHHTC
T ss_pred             CccCHHHHHHHHHHHhh
Confidence               67899999999874

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=97.91  E-value=1.9e-05  Score=56.90  Aligned_cols=77  Identities=17%  Similarity=0.208  Sum_probs=57.9

Q ss_pred             cccEEEEeChhhHHHHHhhccEEEec----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE-E---eC
Q 033065           17 LLAVDCFTFSSSIADHLSSASLVISH----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLY-C---AH   88 (128)
Q Consensus        17 ~~~~~v~~f~~~~~~~~~~adlvIth----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~-~---~~   88 (128)
                      ..++++.++.+++.++|+.||++|.=    +-..++.|++++|+|+|.-+.+.        ..+.+.+.+.|. +   .+
T Consensus       251 ~~~v~~~g~~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g--------~~e~i~~~~~G~l~~~~~d  322 (370)
T d2iw1a1         251 RSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCG--------YAHYIADANCGTVIAEPFS  322 (370)
T ss_dssp             GGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTST--------TTHHHHHHTCEEEECSSCC
T ss_pred             cccccccccccccccccccccccccccccccccceeeecccCCeeEEEeCCCC--------hHHHhcCCCceEEEcCCCC
Confidence            45788889999999999999999853    33479999999999999987652        123344444443 3   27


Q ss_pred             hHHHHHHHHhcch
Q 033065           89 PQSLHQVIVGMDL  101 (128)
Q Consensus        89 ~~~l~~~i~~l~~  101 (128)
                      ++.|.++|.+++.
T Consensus       323 ~~~la~~i~~ll~  335 (370)
T d2iw1a1         323 QEQLNEVLRKALT  335 (370)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHc
Confidence            8999999998854

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.75  E-value=7.3e-05  Score=49.87  Aligned_cols=78  Identities=18%  Similarity=0.177  Sum_probs=59.2

Q ss_pred             cccEEEEeChh--hHHHHHhhccEEEecC----chHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--C
Q 033065           17 LLAVDCFTFSS--SIADHLSSASLVISHA----GSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA--H   88 (128)
Q Consensus        17 ~~~~~v~~f~~--~~~~~~~~adlvItha----G~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~--~   88 (128)
                      ..+++++++++  ++.++|+.||++|.-+    ...++.|++++|+|+|+-+.+    .    ..+.+.....+++.  +
T Consensus        66 ~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~----~----~~e~i~~~~~g~~~~~d  137 (166)
T d2f9fa1          66 PDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEG----G----FKETVINEKTGYLVNAD  137 (166)
T ss_dssp             CTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSH----H----HHHHCCBTTTEEEECSC
T ss_pred             cCcEEEeecccccccccccccccccccccccccccccccccccccccceeecCC----c----ceeeecCCcccccCCCC
Confidence            35799999984  4899999999999764    335999999999999998764    1    23334444555543  7


Q ss_pred             hHHHHHHHHhcchh
Q 033065           89 PQSLHQVIVGMDLK  102 (128)
Q Consensus        89 ~~~l~~~i~~l~~~  102 (128)
                      ++++.+.|.+++++
T Consensus       138 ~~~~~~~i~~l~~~  151 (166)
T d2f9fa1         138 VNEIIDAMKKVSKN  151 (166)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhC
Confidence            89999999999754

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=97.56  E-value=0.00039  Score=52.48  Aligned_cols=100  Identities=22%  Similarity=0.257  Sum_probs=71.6

Q ss_pred             ccEEEEeChh--hHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChHHHH
Q 033065           18 LAVDCFTFSS--SIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC--AHPQSLH   93 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~--~~~~~l~   93 (128)
                      .+++++...+  ++-.+|..|++|||-+|. .+.||.++|+|+|.+...+   ..|..    + +.|..+.  .+++++.
T Consensus       252 ~n~~~~~~l~~~~~l~ll~~s~~vignSss-gi~Ea~~lg~P~Inir~~~---eRqeg----~-~~g~nvlv~~d~~~I~  322 (373)
T d1v4va_         252 RNFVLLDPLEYGSMAALMRASLLLVTDSGG-LQEEGAALGVPVVVLRNVT---ERPEG----L-KAGILKLAGTDPEGVY  322 (373)
T ss_dssp             TTEEEECCCCHHHHHHHHHTEEEEEESCHH-HHHHHHHTTCCEEECSSSC---SCHHH----H-HHTSEEECCSCHHHHH
T ss_pred             ccceeeccchHHHHHHHhhhceeEecccch-hhhcchhhcCcEEEeCCCc---cCHHH----H-hcCeeEEcCCCHHHHH
Confidence            4666666653  466789999999999995 6889999999999995531   34553    1 2455543  3788998


Q ss_pred             HHHHhcch---------hcCCCCC-CCChHHHHHHHHHhcCCC
Q 033065           94 QVIVGMDL---------KSLLPYQ-PGDATPVAKLINRFLGFP  126 (128)
Q Consensus        94 ~~i~~l~~---------~~~~~~~-~~~~~~i~~~i~~~~g~~  126 (128)
                      .+++.++.         ...++|= ..++++|++.|.+.+.+.
T Consensus       323 ~~i~~~l~~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~~  365 (373)
T d1v4va_         323 RVVKGLLENPEELSRMRKAKNPYGDGKAGLMVARGVAWRLGLG  365 (373)
T ss_dssp             HHHHHHHTCHHHHHHHHHSCCSSCCSCHHHHHHHHHHHHTTSS
T ss_pred             HHHHHHHcCHHHHhhcccCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence            88887742         2334553 357889999999998754

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=97.09  E-value=0.0012  Score=49.78  Aligned_cols=100  Identities=13%  Similarity=0.208  Sum_probs=67.5

Q ss_pred             ccEEEEeChh--hHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChHHHH
Q 033065           18 LAVDCFTFSS--SIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC--AHPQSLH   93 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~--~~~~~l~   93 (128)
                      .+++++...+  ++-.+|..|++|||-+|.+ +.||.++|+|+|.+-...   ..|.  .   .+.|..+.  .+.+.+.
T Consensus       256 ~ni~~~~~l~~~~fl~llk~s~~vIgnSss~-i~Ea~~lg~P~Inir~~t---ERqe--~---~~~g~nilv~~~~~~I~  326 (377)
T d1o6ca_         256 DRVHLIEPLEVIDFHNFAAKSHFILTDSGGV-QEEAPSLGKPVLVLRDTT---ERPE--G---VEAGTLKLAGTDEENIY  326 (377)
T ss_dssp             SSEEECCCCCHHHHHHHHHHCSEEEEC--CH-HHHGGGGTCCEEEECSCC---C-----C---TTTTSSEEECSCHHHHH
T ss_pred             cceEeccccchHHHHHHHhhhheeecccchh-HHhhhhhhceEEEeCCCC---cCcc--h---hhcCeeEECCCCHHHHH
Confidence            4677777664  4678999999999999975 889999999999994321   1232  2   13454433  3788888


Q ss_pred             HHHHhcch---------hcCCCCC-CCChHHHHHHHHHhcCCC
Q 033065           94 QVIVGMDL---------KSLLPYQ-PGDATPVAKLINRFLGFP  126 (128)
Q Consensus        94 ~~i~~l~~---------~~~~~~~-~~~~~~i~~~i~~~~g~~  126 (128)
                      +++++++.         ....+|- ..++++|++.|.+.+++.
T Consensus       327 ~~i~~~l~~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~~  369 (377)
T d1o6ca_         327 QLAKQLLTDPDEYKKMSQASNPYGDGEASRRIVEELLFHYGYR  369 (377)
T ss_dssp             HHHHHHHHCHHHHHHHHHCCCTTCCSCHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHhChHHHhhhccCCCCCCCChHHHHHHHHHHHhhCcc
Confidence            88877643         1234553 356889999999988754

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=96.91  E-value=0.0014  Score=48.29  Aligned_cols=73  Identities=14%  Similarity=0.038  Sum_probs=50.8

Q ss_pred             EEEEeCh--hhHHHHHhhccEEEec----CchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChH
Q 033065           20 VDCFTFS--SSIADHLSSASLVISH----AGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---HPQ   90 (128)
Q Consensus        20 ~~v~~f~--~~~~~~~~~adlvIth----aG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~~~   90 (128)
                      ..+.++.  +++..+++.||+++.-    +...++.|++++|+|+|.-..+    +.    .+.+. .+.|++.   +++
T Consensus       311 ~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g----~~----~e~i~-~~~G~~~~~~d~~  381 (437)
T d2bisa1         311 KVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GL----RDIIT-NETGILVKAGDPG  381 (437)
T ss_dssp             EEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCT----TH----HHHCC-TTTCEEECTTCHH
T ss_pred             eeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCCCCEEEeCCC----Cc----HHhEE-CCcEEEECCCCHH
Confidence            3444554  4599999999998865    3456999999999999987654    22    22223 2344443   789


Q ss_pred             HHHHHHHhcch
Q 033065           91 SLHQVIVGMDL  101 (128)
Q Consensus        91 ~l~~~i~~l~~  101 (128)
                      +|+++|.+++.
T Consensus       382 ~la~~i~~ll~  392 (437)
T d2bisa1         382 ELANAILKALE  392 (437)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHHh
Confidence            99999988764

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=96.74  E-value=0.0017  Score=43.82  Aligned_cols=72  Identities=15%  Similarity=0.087  Sum_probs=49.3

Q ss_pred             EEEeCh--hhHHHHHhhccEEEe----cCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChHH
Q 033065           21 DCFTFS--SSIADHLSSASLVIS----HAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCA---HPQS   91 (128)
Q Consensus        21 ~v~~f~--~~~~~~~~~adlvIt----haG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~~---~~~~   91 (128)
                      .+.++.  +++..+|+.||++|.    -+-.+++.|++++|+|+|.--.+    .    ..+ +...+.++..   ++++
T Consensus        95 ~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~----~----~~e-~i~~~~g~~~~~~~~~~  165 (196)
T d2bfwa1          95 VITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----G----LRD-IITNETGILVKAGDPGE  165 (196)
T ss_dssp             EECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCH----H----HHH-HCCTTTCEEECTTCHHH
T ss_pred             EeeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCC----c----cce-eecCCceeeECCCCHHH
Confidence            344444  369999999999994    44457999999999999986432    1    222 2233445443   6788


Q ss_pred             HHHHHHhcch
Q 033065           92 LHQVIVGMDL  101 (128)
Q Consensus        92 l~~~i~~l~~  101 (128)
                      +.+.|.+++.
T Consensus       166 l~~~i~~~l~  175 (196)
T d2bfwa1         166 LANAILKALE  175 (196)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            8888887654

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.67  E-value=0.022  Score=43.03  Aligned_cols=82  Identities=13%  Similarity=-0.066  Sum_probs=51.9

Q ss_pred             cccEEEEeChh--hHHHHHhhccEEEecC-----chHHHHHHHHhCCCEEEEeCCC---CCCchHHHHHHHHHhCCCEEE
Q 033065           17 LLAVDCFTFSS--SIADHLSSASLVISHA-----GSGSIFETLRLGKPLIVVVNED---LMDNHQSELAEELADRKHLYC   86 (128)
Q Consensus        17 ~~~~~v~~f~~--~~~~~~~~adlvItha-----G~~Ti~E~l~~g~P~I~vP~~~---~~~~~Q~~nA~~l~~~g~~~~   86 (128)
                      +.++.+..+.+  ....+++.||++|.-+     | .+++||+++|+|+|.--...   .+.+.  .....+...+.|+.
T Consensus       345 ~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fg-lv~lEAma~G~PvVas~~GG~~E~v~d~--~~~~~~~~~~~G~l  421 (477)
T d1rzua_         345 HGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCG-LTQLYALRYGCIPVVARTGGLADTVIDA--NHAALASKAATGVQ  421 (477)
T ss_dssp             TTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSC-SHHHHHHHHTCEEEEESSHHHHHHCCBC--CHHHHHTTCCCBEE
T ss_pred             CCeEEEEcccChhHHHHHHHhCccccCCccccCCC-HHHHHHHHcCCCEEEcCCCCCcceeecC--CccccccCCCceEE
Confidence            34566665553  3667899999999877     5 48999999999999864421   00000  11122222334544


Q ss_pred             e---ChHHHHHHHHhcch
Q 033065           87 A---HPQSLHQVIVGMDL  101 (128)
Q Consensus        87 ~---~~~~l~~~i~~l~~  101 (128)
                      .   ++++|.++|.++++
T Consensus       422 ~~~~d~~~la~ai~~~l~  439 (477)
T d1rzua_         422 FSPVTLDGLKQAIRRTVR  439 (477)
T ss_dssp             ESSCSHHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHh
Confidence            3   78899999877653

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=95.38  E-value=0.04  Score=41.09  Aligned_cols=95  Identities=15%  Similarity=0.214  Sum_probs=64.0

Q ss_pred             ccEEEEeChh--hHHHHHhhccEEEecCchHHHHHHHHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChHHHH
Q 033065           18 LAVDCFTFSS--SIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC--AHPQSLH   93 (128)
Q Consensus        18 ~~~~v~~f~~--~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~--~~~~~l~   93 (128)
                      .++.+++-..  ++-.+|..|++||+-+|. -+.|+.++|+|+|.+-..    .+|.+   .+ +.|-.+.  .+.+++.
T Consensus       263 ~ni~~~~~l~~~~fl~ll~~a~~vignSss-gi~Ea~~lg~P~Inir~~----ter~~---~~-~~g~~i~v~~~~~~I~  333 (376)
T d1f6da_         263 KNVILIDPQEYLPFVWLMNHAWLILTDSGG-IQEEAPSLGKPVLVMRDT----TERPE---AV-TAGTVRLVGTDKQRIV  333 (376)
T ss_dssp             TTEEEECCCCHHHHHHHHHHCSEEEESSSG-GGGTGGGGTCCEEECSSC----CSCHH---HH-HHTSEEECCSSHHHHH
T ss_pred             ccceeeccccHHHHHHHHhhceEEEecCcc-hHhhHHHhCCCEEEcCCC----ccCcc---ce-ecCeeEECCCCHHHHH
Confidence            4666665543  366789999999999995 588999999999887332    12222   12 2344443  3788888


Q ss_pred             HHHHhcch---------hcCCCCCC-CChHHHHHHHHH
Q 033065           94 QVIVGMDL---------KSLLPYQP-GDATPVAKLINR  121 (128)
Q Consensus        94 ~~i~~l~~---------~~~~~~~~-~~~~~i~~~i~~  121 (128)
                      +++.+++.         ...++|-. .++++|+++|.+
T Consensus       334 ~ai~~~l~~~~~~~~~~~~~npYGdG~as~rI~~iLk~  371 (376)
T d1f6da_         334 EEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALKN  371 (376)
T ss_dssp             HHHHHHHHCHHHHHHHHHSCCTTCCSCHHHHHHHHHHH
T ss_pred             HHHHHHHhChHhhhhhccCCCCCCCChHHHHHHHHHHh
Confidence            88887653         13345543 568899998876

>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TM1055
species: Thermotoga maritima [TaxId: 2336]

Probab=95.32  E-value=0.019  Score=38.56  Aligned_cols=39  Identities=33%  Similarity=0.505  Sum_probs=28.7

Q ss_pred             ChhhHHHHHhhccEEEecCc-hHHHHH---HHHhCCCEEEEeC
Q 033065           25 FSSSIADHLSSASLVISHAG-SGSIFE---TLRLGKPLIVVVN   63 (128)
Q Consensus        25 f~~~~~~~~~~adlvIthaG-~~Ti~E---~l~~g~P~I~vP~   63 (128)
                      |......++..||.+|.-+| .||+.|   ++..++|+|++..
T Consensus        86 ~~~Rk~~m~~~sda~I~lPGG~GTl~El~~a~~l~KPiilln~  128 (170)
T d1rcua_          86 FQMRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRG  128 (170)
T ss_dssp             HHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred             hhhhHHHHhhcccceeeeccccchHHHHHHHHHhCCceEEecC
Confidence            33445567899997776655 999887   4578999998854

>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein YvdD
species: Bacillus subtilis [TaxId: 1423]

Probab=92.23  E-value=0.61  Score=30.95  Aligned_cols=73  Identities=15%  Similarity=0.135  Sum_probs=43.0

Q ss_pred             ChhhHHHHHhhccEEEe-cCchHHHHHHHHh---------CCCEEEEeCCCCCCchHHHHHHHHHhCCCE---------E
Q 033065           25 FSSSIADHLSSASLVIS-HAGSGSIFETLRL---------GKPLIVVVNEDLMDNHQSELAEELADRKHL---------Y   85 (128)
Q Consensus        25 f~~~~~~~~~~adlvIt-haG~~Ti~E~l~~---------g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~---------~   85 (128)
                      +......++..||.+|. -||.||+-|....         .+|++++=..... +.=...-+.+.+.|..         +
T Consensus        87 ~~~Rk~~m~~~sdafI~lPGG~GTLdEl~e~l~~~ql~~~~kPiil~n~~gfw-~~l~~~l~~~~~~gfi~~~~~~~i~~  165 (179)
T d1t35a_          87 MHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYF-EPMMKMVKYSIQEGFSNESHLKLIHS  165 (179)
T ss_dssp             HHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTT-HHHHHHHHHHHHTTSSCTTHHHHEEE
T ss_pred             HHHHHHHHHHhcCeEEEecCccchhhHHHHHHHHHHhhccCCCeEeecCCccH-HHHHHHHHHHHHcCCCChHHhCcEEE
Confidence            33445566788996665 5678999888754         5899888432111 2222334556666642         2


Q ss_pred             EeChHHHHHHHHh
Q 033065           86 CAHPQSLHQVIVG   98 (128)
Q Consensus        86 ~~~~~~l~~~i~~   98 (128)
                      +-+++++.+.|++
T Consensus       166 ~~~~~e~i~~L~~  178 (179)
T d1t35a_         166 SSRPDELIEQMQN  178 (179)
T ss_dssp             ESSHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHh
Confidence            2367766666543

>d2f62a1 c.23.14.1 (A:9-160) Nucleoside 2-deoxyribosyltransferase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: N-(deoxy)ribosyltransferase-like
family: N-deoxyribosyltransferase
domain: Nucleoside 2-deoxyribosyltransferase
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.84  E-value=0.1  Score=34.38  Aligned_cols=38  Identities=21%  Similarity=0.413  Sum_probs=30.4

Q ss_pred             hhhHHHHHhhccEEEe--------cCchHHHHHH---HHhCCCEEEEeCC
Q 033065           26 SSSIADHLSSASLVIS--------HAGSGSIFET---LRLGKPLIVVVNE   64 (128)
Q Consensus        26 ~~~~~~~~~~adlvIt--------haG~~Ti~E~---l~~g~P~I~vP~~   64 (128)
                      ..++ +.|.+||+||.        .+-.||.+|+   .+.|||++.+...
T Consensus        51 ~~d~-~~i~~~D~VIA~Ld~frg~~~D~GTa~EiG~A~algKPVi~~~~d   99 (152)
T d2f62a1          51 QKNI-QMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFTSD   99 (152)
T ss_dssp             HHHH-HHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             HHHH-HHHHhCCEEEEEccccCCCCCCchHHHHHHHHHHCCCeEEEEecC
Confidence            3454 77999999998        3578999996   5789999999653

>d1f8ya_ c.23.14.1 (A:) Nucleoside 2-deoxyribosyltransferase {Lactobacillus leichmannii [TaxId: 28039]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: N-(deoxy)ribosyltransferase-like
family: N-deoxyribosyltransferase
domain: Nucleoside 2-deoxyribosyltransferase
species: Lactobacillus leichmannii [TaxId: 28039]

Probab=91.24  E-value=0.12  Score=34.06  Aligned_cols=38  Identities=16%  Similarity=0.397  Sum_probs=29.2

Q ss_pred             ChhhHHHHHhhccEEEec-----CchHHHHHH---HHhCCCEEEEeC
Q 033065           25 FSSSIADHLSSASLVISH-----AGSGSIFET---LRLGKPLIVVVN   63 (128)
Q Consensus        25 f~~~~~~~~~~adlvIth-----aG~~Ti~E~---l~~g~P~I~vP~   63 (128)
                      |..++ +.|.+||+||..     .-.||.+|+   .+.|||+|++-.
T Consensus        68 f~~D~-~~i~~aD~via~ldg~~~D~Gta~EiG~A~a~gKpvi~~~~  113 (156)
T d1f8ya_          68 YNNDL-NGIKTNDIMLGVYIPDEEDVGLGMELGYALSQGKYVLLVIP  113 (156)
T ss_dssp             HHHHH-HHHHTSSEEEEECCGGGCCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             HHHHH-HHHHHCCEEEEEeCCCCCCCCHHHHHHHHHHcCCcEEEEec
Confidence            34455 679999999983     346999996   578999999844

>d1s2da_ c.23.14.1 (A:) Purine transdeoxyribosylase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: N-(deoxy)ribosyltransferase-like
family: N-deoxyribosyltransferase
domain: Purine transdeoxyribosylase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=91.05  E-value=0.17  Score=33.45  Aligned_cols=36  Identities=28%  Similarity=0.392  Sum_probs=28.6

Q ss_pred             hhHHHHHhhccEEEe-----cCchHHHHHH---HHhCCCEEEEeC
Q 033065           27 SSIADHLSSASLVIS-----HAGSGSIFET---LRLGKPLIVVVN   63 (128)
Q Consensus        27 ~~~~~~~~~adlvIt-----haG~~Ti~E~---l~~g~P~I~vP~   63 (128)
                      .++ +.|.+||+||.     ....||.+|+   .+.|||+|.+..
T Consensus        74 ~D~-~~i~~sD~vIA~ldg~~~D~GTa~EiG~A~a~gKPvi~~~~  117 (167)
T d1s2da_          74 NDL-TGISNATCGVFLYDMDQLDDGSAFEIGFMRAMHKPVILVPF  117 (167)
T ss_dssp             HHH-HHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             HHH-HHHHHCCEEEEEeCCCCCCccHHHHHHHHHHCCCeEEEEec
Confidence            454 67899999987     3567999996   578999999854

>d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At2g37210/T2N18.3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.69  E-value=1.2  Score=29.59  Aligned_cols=71  Identities=13%  Similarity=0.195  Sum_probs=42.4

Q ss_pred             ChhhHHHHHhhccEEEe-cCchHHHHHHHH---------hCCCEEEEeCC-CCCCchHHHHHHHHHhCCCE---------
Q 033065           25 FSSSIADHLSSASLVIS-HAGSGSIFETLR---------LGKPLIVVVNE-DLMDNHQSELAEELADRKHL---------   84 (128)
Q Consensus        25 f~~~~~~~~~~adlvIt-haG~~Ti~E~l~---------~g~P~I~vP~~-~~~~~~Q~~nA~~l~~~g~~---------   84 (128)
                      |......++..||.+|. -||.||+-|...         +.+|++++=.. .+ + .=...-+.+.+.|..         
T Consensus        92 ~~~Rk~~m~~~sdafIvlPGG~GTLdEl~e~lt~~ql~~~~kpiiiln~~gfw-~-~l~~~l~~~~~~g~i~~~~~~~~~  169 (183)
T d2q4oa1          92 MHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY-N-SLLSFIDKAVEEGFISPTAREIIV  169 (183)
T ss_dssp             HHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHHTSCCCCEEEECGGGTT-H-HHHHHHHHHHHTTSSCHHHHTTEE
T ss_pred             HHHHHHHHHHhCceEEEeCCcchhHHHHHHHHHHHHhcCCCCCeEEeecCccH-H-HHHHHHHHHHHCCCCChHHcCcEE
Confidence            33456677888996665 567899988774         46888877332 22 1 112233555556642         


Q ss_pred             EEeChHHHHHHHH
Q 033065           85 YCAHPQSLHQVIV   97 (128)
Q Consensus        85 ~~~~~~~l~~~i~   97 (128)
                      ++-+++++.+.|+
T Consensus       170 ~~d~~~e~~~~l~  182 (183)
T d2q4oa1         170 SAPTAKELVKKLE  182 (183)
T ss_dssp             EESSHHHHHHHHH
T ss_pred             EcCCHHHHHHHHh
Confidence            2236777766665

>d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TT1465 (TTHA1644)
species: Thermus thermophilus [TaxId: 274]

Probab=89.02  E-value=0.73  Score=31.47  Aligned_cols=68  Identities=16%  Similarity=0.159  Sum_probs=38.6

Q ss_pred             hHHHHHhhcc-EEEecCchHHHHHHHHh----------CCCEEEEeCCCCCCchHHHHHHHHHhCCCE---------EEe
Q 033065           28 SIADHLSSAS-LVISHAGSGSIFETLRL----------GKPLIVVVNEDLMDNHQSELAEELADRKHL---------YCA   87 (128)
Q Consensus        28 ~~~~~~~~ad-lvIthaG~~Ti~E~l~~----------g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~---------~~~   87 (128)
                      .-..++..|| +|+--||.||+.|....          .+|+|++=...+  +.-...-+.+.+.|..         ++-
T Consensus       120 Rk~~m~~~sDafI~lPGG~GTLdEl~e~lt~~ql~~~~~kPIil~~~gfw--~~l~~~l~~~~~~gfi~~~~~~~i~v~d  197 (208)
T d1weka_         120 RKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDRGYW--EGLVRWLAFLRDQKAVGPEDLQLFRLTD  197 (208)
T ss_dssp             HHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECHHHH--HHHHHHHHHHHHTTSSCTTGGGGSEEES
T ss_pred             HHHHHHhCCCceEEecCcchhHHHHHHHHHHHhccccCcCcccccCCcHH--HHHHHHHHHHHHCCCCChHHhCcEEEeC
Confidence            3445677798 55667889999887642          578888731111  1111223455555532         223


Q ss_pred             ChHHHHHHHH
Q 033065           88 HPQSLHQVIV   97 (128)
Q Consensus        88 ~~~~l~~~i~   97 (128)
                      +++++.+.|+
T Consensus       198 ~~ee~i~~L~  207 (208)
T d1weka_         198 EPEEVVQALK  207 (208)
T ss_dssp             CHHHHHHHHH
T ss_pred             CHHHHHHHhh
Confidence            6666666554

>d1sbza_ c.34.1.1 (A:) Probable aromatic acid decarboxylase Pad1 {Escherichia coli O157:H7 [TaxId: 83334]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: Probable aromatic acid decarboxylase Pad1
species: Escherichia coli O157:H7 [TaxId: 83334]

Probab=88.69  E-value=1.2  Score=29.66  Aligned_cols=54  Identities=13%  Similarity=0.121  Sum_probs=41.0

Q ss_pred             Hhhcc-EEEecCchHHHHHH----------------HHhCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 033065           33 LSSAS-LVISHAGSGSIFET----------------LRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC   86 (128)
Q Consensus        33 ~~~ad-lvIthaG~~Ti~E~----------------l~~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~~~~   86 (128)
                      -.++| +||+=|-++|+...                +..++|++++|...+...-..+|...|.+.|+.++
T Consensus        75 s~~aD~~vIaPaTanTlAKiA~GiaDnLlt~~a~~~~k~~~~lv~~p~em~~~~~~~~N~~~L~~~G~~i~  145 (186)
T d1sbza_          75 SFRTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMV  145 (186)
T ss_dssp             TSCCSEEEEEEECHHHHHHHHHTCCCSHHHHHHHHHHHHTCEEEEEECCSSBCHHHHHHHHHHHTTTCEEC
T ss_pred             cccccEEEEccccHhHHHHHHcCCCCCHHHHHHHHhccccceeEEeecCCccCHHHHHHHHHHHHCCcEEe
Confidence            34567 56677777777654                34589999999987666666789999999999876

>d1eiwa_ c.23.3.1 (A:) Hypothetical protein MTH538 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Hypothetical protein MTH538
family: Hypothetical protein MTH538
domain: Hypothetical protein MTH538
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.10  E-value=0.083  Score=33.13  Aligned_cols=62  Identities=19%  Similarity=0.162  Sum_probs=44.2

Q ss_pred             HhhccEEEecCchHH---------HHHHHHhCCCEEEE-eCCCCCCchHHHHHHHHHhCCCEEE-eChHHHHHHHHhcc
Q 033065           33 LSSASLVISHAGSGS---------IFETLRLGKPLIVV-VNEDLMDNHQSELAEELADRKHLYC-AHPQSLHQVIVGMD  100 (128)
Q Consensus        33 ~~~adlvIthaG~~T---------i~E~l~~g~P~I~v-P~~~~~~~~Q~~nA~~l~~~g~~~~-~~~~~l~~~i~~l~  100 (128)
                      |..+|+||.-+|.-|         +-.|..+|||+|.| |+.      |.+.-..+.+....++ -+.+.+.++|++.+
T Consensus        36 ~~~~~vvIVL~G~yt~~r~WI~~EI~~A~~~~KpIIgV~p~G------~e~~P~~l~~~A~~iVgWN~~sIvdAIr~al  108 (111)
T d1eiwa_          36 PEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYG------LENVPPELEAVSSEVVGWNPHCIRDALEDAL  108 (111)
T ss_dssp             SSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSS------SSCCCTTHHHHCSEEECSCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEeeccccCCHHHHHHHHHHHHcCCCeEEEEecC------CCcCCHHHHHhhccccCCcHHHHHHHHHHHh
Confidence            467999999999877         45566799999999 553      2234445555555555 38888888887654

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=86.85  E-value=0.46  Score=33.47  Aligned_cols=34  Identities=12%  Similarity=0.346  Sum_probs=30.8

Q ss_pred             hhHHHHHhhccEEEecCchHHHHHHHHhCCCEEEE
Q 033065           27 SSIADHLSSASLVISHAGSGSIFETLRLGKPLIVV   61 (128)
Q Consensus        27 ~~~~~~~~~adlvIthaG~~Ti~E~l~~g~P~I~v   61 (128)
                      .++..+|..||++||-=+ |.+--|.++|+|+|.+
T Consensus       253 ~el~~li~~a~l~I~~Dt-g~~HlAaa~g~p~i~l  286 (348)
T d1pswa_         253 DQAVILIAACKAIVTNDS-GLMHVAAALNRPLVAL  286 (348)
T ss_dssp             HHHHHHHHTSSEEEEESS-HHHHHHHHTTCCEEEE
T ss_pred             HHHHHHHhcceeEeecCc-cHHHHHHHcCCCEEEE
Confidence            467889999999999998 5788899999999999

>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At5g11950
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.81  E-value=1.1  Score=29.80  Aligned_cols=77  Identities=13%  Similarity=0.106  Sum_probs=43.0

Q ss_pred             EEEeChhhHHHHHhhccEEEe-cCchHHHHHHHH---------hCCCEEEEeCCCCCCchHHHHHHHHHhCCC-------
Q 033065           21 DCFTFSSSIADHLSSASLVIS-HAGSGSIFETLR---------LGKPLIVVVNEDLMDNHQSELAEELADRKH-------   83 (128)
Q Consensus        21 ~v~~f~~~~~~~~~~adlvIt-haG~~Ti~E~l~---------~g~P~I~vP~~~~~~~~Q~~nA~~l~~~g~-------   83 (128)
                      .+..+.+....++..||.+|. -||.||+-|...         +.+|.+++=.....+ .=...-+.+.+.|.       
T Consensus        84 ~~~~~~~Rk~~m~~~sdafIvlPGG~GTLdEl~e~l~l~ql~~~~kpiiiln~~gfw~-~l~~~l~~~~~~g~i~~~~~~  162 (181)
T d1ydhb_          84 VVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYN-NLLALFDTGVEEGFIKPGARN  162 (181)
T ss_dssp             EESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTH-HHHHHHHHHHHHTSSCHHHHT
T ss_pred             eeccHHHHHHHHHHhCeeEEEeCCccchHHHHHHHHHHHHhcccCCCeEEEecCccHH-HHHHHHHHHHHCCCCCHHHcC
Confidence            333344557788999997665 567899888763         567777774321111 11122244554443       


Q ss_pred             -E-EEeChHHHHHHHHh
Q 033065           84 -L-YCAHPQSLHQVIVG   98 (128)
Q Consensus        84 -~-~~~~~~~l~~~i~~   98 (128)
                       . ++-+++++.+.|++
T Consensus       163 ~~~~~d~~ee~~~~l~~  179 (181)
T d1ydhb_         163 IVVSAPTAKELMEKMEE  179 (181)
T ss_dssp             TEEEESSHHHHHHHHHH
T ss_pred             eEEEeCCHHHHHHHHHh
Confidence             2 22367766666553