Citrus Sinensis ID: 033156


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120------
MMVRFKMYNSFGFKSLAAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVGTVFSRYSA
ccEEEEcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEccccccccccccHHHHHHHHHHHcccccccEEEEcccccccccccccccEEEEccccccccccccEEEccEEEEccc
ccHHHcHcccHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEcccccHcHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccEEEEEcccccccccccccccccEEEEEcc
MMVRFKMYNSFGFKSLAAMLLFFILSISISYRASaettmhtnnWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMacnarnkypaqvfnnenhklnlygdnvevgtVFSRYSA
MMVRFKMYNSFGFKSLAAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHklnlygdnvevgtvfsrysa
MMVRFKMYNSFGFKSLAAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVGTVFSRYSA
***RFKMYNSFGFKSLAAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVGTVF*****
********NSFGFKSLAAMLLFFILSISISYR******MHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVGTVFSRYSA
MMVRFKMYNSFGFKSLAAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVGTVFSRYSA
*MVRFKMYNSFGFKSLAAMLLFFILSISISYRAS****MHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVGTVFSRYSA
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MMVRFKMYNSFGFKSLAAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVGTVFSRYSA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query126 2.2.26 [Sep-21-2011]
Q4KRV1 395 GPI-anchor transamidase O yes no 0.841 0.268 0.627 2e-34
Q5R6L8 395 GPI-anchor transamidase O yes no 0.817 0.260 0.644 4e-34
Q9CXY9 395 GPI-anchor transamidase O yes no 0.619 0.197 0.782 6e-34
Q92643 395 GPI-anchor transamidase O yes no 0.809 0.258 0.641 2e-33
Q8T4E1 355 Putative GPI-anchor trans yes no 0.666 0.236 0.702 4e-33
Q3MHZ7 395 GPI-anchor transamidase O yes no 0.619 0.197 0.756 7e-33
P49018 411 GPI-anchor transamidase O yes no 0.619 0.189 0.743 2e-32
Q9USP5 380 GPI-anchor transamidase O yes no 0.658 0.218 0.626 8e-29
P49048 319 Putative GPI-anchor trans yes no 0.642 0.253 0.597 5e-25
P09841 429 Hemoglobinase OS=Schistos N/A no 0.706 0.207 0.386 7e-13
>sp|Q4KRV1|GPI8_PIG GPI-anchor transamidase OS=Sus scrofa GN=PIGK PE=2 SV=1 Back     alignment and function desciption
 Score =  144 bits (363), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 69/110 (62%), Positives = 86/110 (78%), Gaps = 4/110 (3%)

Query: 12  GFKSLAAMLLFFILSISIS-YRASAET---TMHTNNWAVLVCTSRFWFNYRHMANTLSLY 67
           GF +LA +LL    S++ S     AE    + HTNNWAVLVCTSRFWFNYRH+ANTLS+Y
Sbjct: 10  GFTTLAGLLLLPFGSLAASQIEDQAEQFFRSGHTNNWAVLVCTSRFWFNYRHVANTLSVY 69

Query: 68  RTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEV 117
           R+VKRLG+PD  I+LMLADDMACN RN  PA V++++N +LN+YGD+VEV
Sbjct: 70  RSVKRLGIPDSHIVLMLADDMACNPRNPKPATVYSHKNMELNVYGDDVEV 119




Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.
Sus scrofa (taxid: 9823)
EC: 3EC: .EC: -EC: .EC: -EC: .EC: -
>sp|Q5R6L8|GPI8_PONAB GPI-anchor transamidase OS=Pongo abelii GN=PIGK PE=2 SV=1 Back     alignment and function description
>sp|Q9CXY9|GPI8_MOUSE GPI-anchor transamidase OS=Mus musculus GN=Pigk PE=2 SV=2 Back     alignment and function description
>sp|Q92643|GPI8_HUMAN GPI-anchor transamidase OS=Homo sapiens GN=PIGK PE=1 SV=2 Back     alignment and function description
>sp|Q8T4E1|GPI8_DROME Putative GPI-anchor transamidase OS=Drosophila melanogaster GN=CG4406 PE=2 SV=1 Back     alignment and function description
>sp|Q3MHZ7|GPI8_BOVIN GPI-anchor transamidase OS=Bos taurus GN=PIGK PE=2 SV=1 Back     alignment and function description
>sp|P49018|GPI8_YEAST GPI-anchor transamidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI8 PE=1 SV=1 Back     alignment and function description
>sp|Q9USP5|GPI8_SCHPO GPI-anchor transamidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi8 PE=2 SV=1 Back     alignment and function description
>sp|P49048|GPI8_CAEEL Putative GPI-anchor transamidase OS=Caenorhabditis elegans GN=T05E11.6 PE=1 SV=3 Back     alignment and function description
>sp|P09841|HGLB_SCHMA Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query126
224116008 406 predicted protein [Populus trichocarpa] 0.912 0.283 0.791 4e-49
356516961 402 PREDICTED: GPI-anchor transamidase-like 0.825 0.258 0.830 1e-45
255561891 391 gpi-anchor transamidase, putative [Ricin 0.698 0.225 0.909 2e-43
21537105 388 putative GPI-anchor transamidase [Arabid 0.674 0.219 0.917 4e-43
18390936 388 peptidase C13-like protein [Arabidopsis 0.674 0.219 0.917 5e-43
297843662 382 hypothetical protein ARALYDRAFT_888110 [ 0.674 0.222 0.929 5e-43
359488041 430 PREDICTED: GPI-anchor transamidase-like 0.642 0.188 0.975 1e-42
296087890 405 unnamed protein product [Vitis vinifera] 0.642 0.2 0.975 1e-42
449449547 399 PREDICTED: GPI-anchor transamidase-like 0.706 0.223 0.853 4e-42
148906753 404 unknown [Picea sitchensis] 0.634 0.198 0.95 3e-41
>gi|224116008|ref|XP_002332025.1| predicted protein [Populus trichocarpa] gi|222875250|gb|EEF12381.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  199 bits (505), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 95/120 (79%), Positives = 107/120 (89%), Gaps = 5/120 (4%)

Query: 1   MMVRFKMYNSFGFKSLAAMLLFFILSISISYRA---SAETTMHTNNWAVLVCTSRFWFNY 57
           MM+ FK+Y+ F FK   ++ LFF L+ +I+Y +   SA+TTMHTNNWAVLVCTSRFWFNY
Sbjct: 1   MMMGFKIYSLFSFK--MSIFLFFFLNNAIAYSSHSSSADTTMHTNNWAVLVCTSRFWFNY 58

Query: 58  RHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEV 117
           RHMANTLSLYRTVKRLG+PDERIILMLADDMACNARNKYPAQVFNNENH+LNLYGDNVEV
Sbjct: 59  RHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKYPAQVFNNENHRLNLYGDNVEV 118




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516961|ref|XP_003527159.1| PREDICTED: GPI-anchor transamidase-like [Glycine max] Back     alignment and taxonomy information
>gi|255561891|ref|XP_002521954.1| gpi-anchor transamidase, putative [Ricinus communis] gi|223538758|gb|EEF40358.1| gpi-anchor transamidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|21537105|gb|AAM61446.1| putative GPI-anchor transamidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18390936|ref|NP_563825.1| peptidase C13-like protein [Arabidopsis thaliana] gi|30680805|ref|NP_849616.1| peptidase C13-like protein [Arabidopsis thaliana] gi|42571407|ref|NP_973794.1| peptidase C13-like protein [Arabidopsis thaliana] gi|26450273|dbj|BAC42253.1| putative GPI-anchor transamidase [Arabidopsis thaliana] gi|332190220|gb|AEE28341.1| peptidase C13-like protein [Arabidopsis thaliana] gi|332190221|gb|AEE28342.1| peptidase C13-like protein [Arabidopsis thaliana] gi|332190222|gb|AEE28343.1| peptidase C13-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297843662|ref|XP_002889712.1| hypothetical protein ARALYDRAFT_888110 [Arabidopsis lyrata subsp. lyrata] gi|297335554|gb|EFH65971.1| hypothetical protein ARALYDRAFT_888110 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|359488041|ref|XP_003633692.1| PREDICTED: GPI-anchor transamidase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296087890|emb|CBI35173.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449449547|ref|XP_004142526.1| PREDICTED: GPI-anchor transamidase-like [Cucumis sativus] gi|449479751|ref|XP_004155697.1| PREDICTED: GPI-anchor transamidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|148906753|gb|ABR16523.1| unknown [Picea sitchensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query126
TAIR|locus:2025590 388 AT1G08750 "AT1G08750" [Arabido 0.777 0.252 0.818 1.4e-41
DICTYBASE|DDB_G0285461 446 pigK "phosphatidylinositol gly 0.619 0.174 0.794 2e-33
UNIPROTKB|Q5R6L8 395 PIGK "GPI-anchor transamidase" 0.817 0.260 0.644 3.7e-32
UNIPROTKB|Q4KRV1 395 PIGK "GPI-anchor transamidase" 0.841 0.268 0.627 4.7e-32
UNIPROTKB|A6NEM5 332 PIGK "GPI-anchor transamidase" 0.809 0.307 0.641 1.3e-31
UNIPROTKB|Q92643 395 PIGK "GPI-anchor transamidase" 0.809 0.258 0.641 1.3e-31
UNIPROTKB|Q3MHZ7 395 PIGK "GPI-anchor transamidase" 0.857 0.273 0.616 1.6e-31
MGI|MGI:1913863 395 Pigk "phosphatidylinositol gly 0.619 0.197 0.782 1.6e-31
RGD|1306753 395 Pigk "phosphatidylinositol gly 0.619 0.197 0.782 1.6e-31
ZFIN|ZDB-GENE-040625-162 389 pigk "phosphatidylinositol gly 0.817 0.264 0.616 2e-31
TAIR|locus:2025590 AT1G08750 "AT1G08750" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 81/99 (81%), Positives = 91/99 (91%)

Query:    20 LLFFILSISISYRASA-ETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDE 78
             +L  ++ +  S+ +S  +TT+HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLG+PDE
Sbjct:     3 ILTLVMLLCYSFVSSTGDTTIHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDE 62

Query:    79 RIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEV 117
             RIILMLADDMACNARN+YPAQVFNNENHKLNLYGDNVEV
Sbjct:    63 RIILMLADDMACNARNEYPAQVFNNENHKLNLYGDNVEV 101




GO:0003923 "GPI-anchor transamidase activity" evidence=ISS
GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0046520 "sphingoid biosynthetic process" evidence=RCA
GO:0005783 "endoplasmic reticulum" evidence=IDA
DICTYBASE|DDB_G0285461 pigK "phosphatidylinositol glycan, class K" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q5R6L8 PIGK "GPI-anchor transamidase" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KRV1 PIGK "GPI-anchor transamidase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|A6NEM5 PIGK "GPI-anchor transamidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q92643 PIGK "GPI-anchor transamidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q3MHZ7 PIGK "GPI-anchor transamidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1913863 Pigk "phosphatidylinositol glycan anchor biosynthesis, class K" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1306753 Pigk "phosphatidylinositol glycan anchor biosynthesis, class K" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040625-162 pigk "phosphatidylinositol glycan, class K" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9CXY9GPI8_MOUSE3, ., -, ., -, ., -0.78200.61900.1974yesno
P49018GPI8_YEAST3, ., -, ., -, ., -0.74350.61900.1897yesno
Q3MHZ7GPI8_BOVIN3, ., -, ., -, ., -0.75640.61900.1974yesno
Q8T4E1GPI8_DROME3, ., -, ., -, ., -0.70230.66660.2366yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query126
COG5206 382 COG5206, GPI8, Glycosylphosphatidylinositol transa 7e-36
pfam01650 258 pfam01650, Peptidase_C13, Peptidase C13 family 2e-17
>gnl|CDD|227531 COG5206, GPI8, Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
 Score =  125 bits (316), Expect = 7e-36
 Identities = 54/101 (53%), Positives = 69/101 (68%)

Query: 17  AAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVP 76
            A     +LS+ + +   A    +TNNWAVL+ TSRFWFNYRHMAN L  YR VKRLG+P
Sbjct: 3   PAFTHLLLLSLILLHVLGAAARTNTNNWAVLLSTSRFWFNYRHMANVLVFYRVVKRLGIP 62

Query: 77  DERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEV 117
           D +IILM  DD ACN+RN +P  VFNN +   +LYG++ E+
Sbjct: 63  DSQIILMSYDDQACNSRNLFPGSVFNNSDRAGDLYGEDSEI 103


Length = 382

>gnl|CDD|216627 pfam01650, Peptidase_C13, Peptidase C13 family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 126
KOG1348 477 consensus Asparaginyl peptidases [Posttranslationa 100.0
KOG1349 309 consensus Gpi-anchor transamidase [Posttranslation 100.0
PF01650 256 Peptidase_C13: Peptidase C13 family; InterPro: IPR 100.0
COG5206 382 GPI8 Glycosylphosphatidylinositol transamidase (GP 100.0
COG2949235 SanA Uncharacterized membrane protein [Function un 92.97
PRK10629127 EnvZ/OmpR regulon moderator; Provisional 91.87
KOG1017267 consensus Predicted uracil phosphoribosyltransfera 85.03
>KOG1348 consensus Asparaginyl peptidases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
Probab=100.00  E-value=1.5e-39  Score=279.18  Aligned_cols=86  Identities=31%  Similarity=0.537  Sum_probs=82.4

Q ss_pred             cCCCcEEEEEecCCCccchhhhHHHHHHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCCCccCCceeec
Q 033156           39 MHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVG  118 (126)
Q Consensus        39 ~~~~nwAVlvagS~~w~NYRHqAdv~~~Y~~Lk~~Gi~denIIlm~~DDia~nprNp~pG~if~~~~~~~nlYg~~v~ID  118 (126)
                      ..+.+||||||||+||||||||||+||+||+||++|||+||||+|||||||+||+||+||+|+|.|+|+ ++| ++|..|
T Consensus        42 dggt~waVLVAGSngyyNYRHQADvcHAYqiLrkgGikeEnIvv~MYDDIA~~~~NPrpG~iiN~P~G~-DvY-~GvpkD  119 (477)
T KOG1348|consen   42 DGGTRWAVLVAGSNGYYNYRHQADVCHAYQILRKGGIKEENIVVMMYDDIANNEENPRPGVIINRPNGK-DVY-QGVPKD  119 (477)
T ss_pred             cCceeEEEEEecCCcccchhhhhhHHHHHHHHHhcCCCchhEEEEEehhhhcCCCCCCCceeecCCCch-hhh-cCCCCc
Confidence            346999999999999999999999999999999999999999999999999999999999999999995 999 789999


Q ss_pred             ccCCcCCC
Q 033156          119 TVFSRYSA  126 (126)
Q Consensus       119 Y~~~~v~~  126 (126)
                      |++++|++
T Consensus       120 Ytg~~Vt~  127 (477)
T KOG1348|consen  120 YTGEDVTP  127 (477)
T ss_pred             ccCCcCCH
Confidence            99999984



>KOG1349 consensus Gpi-anchor transamidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF01650 Peptidase_C13: Peptidase C13 family; InterPro: IPR001096 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG5206 GPI8 Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2949 SanA Uncharacterized membrane protein [Function unknown] Back     alignment and domain information
>PRK10629 EnvZ/OmpR regulon moderator; Provisional Back     alignment and domain information
>KOG1017 consensus Predicted uracil phosphoribosyltransferase [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query126
4af8_A 367 Metacaspase MCA2; hydrolase, cysteine peptidase, c 82.14
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A Back     alignment and structure
Probab=82.14  E-value=2.6  Score=35.30  Aligned_cols=49  Identities=8%  Similarity=0.202  Sum_probs=36.8

Q ss_pred             cccCCCcEEEEEecCCCc----cchhhhHHHHHHHHHHHhCCCCCCCEEEEecC
Q 033156           37 TTMHTNNWAVLVCTSRFW----FNYRHMANTLSLYRTVKRLGVPDERIILMLAD   86 (126)
Q Consensus        37 ~~~~~~nwAVlvagS~~w----~NYRHqAdv~~~Y~~Lk~~Gi~denIIlm~~D   86 (126)
                      ....+++||++|+-+.+=    -++ =..|+-.+.+.|++.|++.++|.++.-+
T Consensus        87 ~~~~grr~ALlIGIn~Y~~~~~L~g-~vnDA~~m~~~L~~~GF~~~~i~~L~D~  139 (367)
T 4af8_A           87 PLPGQTVRALFIGINYYGTSAALSG-CCNDVKQMLATLQKRGLPINEAVILVDE  139 (367)
T ss_dssp             CCTTCCEEEEEEECCCTTSTTCCSS-HHHHHHHHHHHHHHTTCCCSEEEEEECC
T ss_pred             CCCCCCeEEEEEEeCCCCCccCCCC-HHHHHHHHHHHHHHcCCCchheEEeccc
Confidence            345789999999988421    011 2678999999999999999998876643




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00