Citrus Sinensis ID: 033156
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 126 | ||||||
| 224116008 | 406 | predicted protein [Populus trichocarpa] | 0.912 | 0.283 | 0.791 | 4e-49 | |
| 356516961 | 402 | PREDICTED: GPI-anchor transamidase-like | 0.825 | 0.258 | 0.830 | 1e-45 | |
| 255561891 | 391 | gpi-anchor transamidase, putative [Ricin | 0.698 | 0.225 | 0.909 | 2e-43 | |
| 21537105 | 388 | putative GPI-anchor transamidase [Arabid | 0.674 | 0.219 | 0.917 | 4e-43 | |
| 18390936 | 388 | peptidase C13-like protein [Arabidopsis | 0.674 | 0.219 | 0.917 | 5e-43 | |
| 297843662 | 382 | hypothetical protein ARALYDRAFT_888110 [ | 0.674 | 0.222 | 0.929 | 5e-43 | |
| 359488041 | 430 | PREDICTED: GPI-anchor transamidase-like | 0.642 | 0.188 | 0.975 | 1e-42 | |
| 296087890 | 405 | unnamed protein product [Vitis vinifera] | 0.642 | 0.2 | 0.975 | 1e-42 | |
| 449449547 | 399 | PREDICTED: GPI-anchor transamidase-like | 0.706 | 0.223 | 0.853 | 4e-42 | |
| 148906753 | 404 | unknown [Picea sitchensis] | 0.634 | 0.198 | 0.95 | 3e-41 |
| >gi|224116008|ref|XP_002332025.1| predicted protein [Populus trichocarpa] gi|222875250|gb|EEF12381.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/120 (79%), Positives = 107/120 (89%), Gaps = 5/120 (4%)
Query: 1 MMVRFKMYNSFGFKSLAAMLLFFILSISISYRA---SAETTMHTNNWAVLVCTSRFWFNY 57
MM+ FK+Y+ F FK ++ LFF L+ +I+Y + SA+TTMHTNNWAVLVCTSRFWFNY
Sbjct: 1 MMMGFKIYSLFSFK--MSIFLFFFLNNAIAYSSHSSSADTTMHTNNWAVLVCTSRFWFNY 58
Query: 58 RHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEV 117
RHMANTLSLYRTVKRLG+PDERIILMLADDMACNARNKYPAQVFNNENH+LNLYGDNVEV
Sbjct: 59 RHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKYPAQVFNNENHRLNLYGDNVEV 118
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516961|ref|XP_003527159.1| PREDICTED: GPI-anchor transamidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|255561891|ref|XP_002521954.1| gpi-anchor transamidase, putative [Ricinus communis] gi|223538758|gb|EEF40358.1| gpi-anchor transamidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|21537105|gb|AAM61446.1| putative GPI-anchor transamidase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|18390936|ref|NP_563825.1| peptidase C13-like protein [Arabidopsis thaliana] gi|30680805|ref|NP_849616.1| peptidase C13-like protein [Arabidopsis thaliana] gi|42571407|ref|NP_973794.1| peptidase C13-like protein [Arabidopsis thaliana] gi|26450273|dbj|BAC42253.1| putative GPI-anchor transamidase [Arabidopsis thaliana] gi|332190220|gb|AEE28341.1| peptidase C13-like protein [Arabidopsis thaliana] gi|332190221|gb|AEE28342.1| peptidase C13-like protein [Arabidopsis thaliana] gi|332190222|gb|AEE28343.1| peptidase C13-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297843662|ref|XP_002889712.1| hypothetical protein ARALYDRAFT_888110 [Arabidopsis lyrata subsp. lyrata] gi|297335554|gb|EFH65971.1| hypothetical protein ARALYDRAFT_888110 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|359488041|ref|XP_003633692.1| PREDICTED: GPI-anchor transamidase-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296087890|emb|CBI35173.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449449547|ref|XP_004142526.1| PREDICTED: GPI-anchor transamidase-like [Cucumis sativus] gi|449479751|ref|XP_004155697.1| PREDICTED: GPI-anchor transamidase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|148906753|gb|ABR16523.1| unknown [Picea sitchensis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 126 | ||||||
| TAIR|locus:2025590 | 388 | AT1G08750 "AT1G08750" [Arabido | 0.777 | 0.252 | 0.818 | 1.4e-41 | |
| DICTYBASE|DDB_G0285461 | 446 | pigK "phosphatidylinositol gly | 0.619 | 0.174 | 0.794 | 2e-33 | |
| UNIPROTKB|Q5R6L8 | 395 | PIGK "GPI-anchor transamidase" | 0.817 | 0.260 | 0.644 | 3.7e-32 | |
| UNIPROTKB|Q4KRV1 | 395 | PIGK "GPI-anchor transamidase" | 0.841 | 0.268 | 0.627 | 4.7e-32 | |
| UNIPROTKB|A6NEM5 | 332 | PIGK "GPI-anchor transamidase" | 0.809 | 0.307 | 0.641 | 1.3e-31 | |
| UNIPROTKB|Q92643 | 395 | PIGK "GPI-anchor transamidase" | 0.809 | 0.258 | 0.641 | 1.3e-31 | |
| UNIPROTKB|Q3MHZ7 | 395 | PIGK "GPI-anchor transamidase" | 0.857 | 0.273 | 0.616 | 1.6e-31 | |
| MGI|MGI:1913863 | 395 | Pigk "phosphatidylinositol gly | 0.619 | 0.197 | 0.782 | 1.6e-31 | |
| RGD|1306753 | 395 | Pigk "phosphatidylinositol gly | 0.619 | 0.197 | 0.782 | 1.6e-31 | |
| ZFIN|ZDB-GENE-040625-162 | 389 | pigk "phosphatidylinositol gly | 0.817 | 0.264 | 0.616 | 2e-31 |
| TAIR|locus:2025590 AT1G08750 "AT1G08750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 81/99 (81%), Positives = 91/99 (91%)
Query: 20 LLFFILSISISYRASA-ETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDE 78
+L ++ + S+ +S +TT+HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLG+PDE
Sbjct: 3 ILTLVMLLCYSFVSSTGDTTIHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDE 62
Query: 79 RIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEV 117
RIILMLADDMACNARN+YPAQVFNNENHKLNLYGDNVEV
Sbjct: 63 RIILMLADDMACNARNEYPAQVFNNENHKLNLYGDNVEV 101
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| DICTYBASE|DDB_G0285461 pigK "phosphatidylinositol glycan, class K" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5R6L8 PIGK "GPI-anchor transamidase" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q4KRV1 PIGK "GPI-anchor transamidase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A6NEM5 PIGK "GPI-anchor transamidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q92643 PIGK "GPI-anchor transamidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q3MHZ7 PIGK "GPI-anchor transamidase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| MGI|MGI:1913863 Pigk "phosphatidylinositol glycan anchor biosynthesis, class K" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1306753 Pigk "phosphatidylinositol glycan anchor biosynthesis, class K" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040625-162 pigk "phosphatidylinositol glycan, class K" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 126 | |||
| COG5206 | 382 | COG5206, GPI8, Glycosylphosphatidylinositol transa | 7e-36 | |
| pfam01650 | 258 | pfam01650, Peptidase_C13, Peptidase C13 family | 2e-17 |
| >gnl|CDD|227531 COG5206, GPI8, Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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Score = 125 bits (316), Expect = 7e-36
Identities = 54/101 (53%), Positives = 69/101 (68%)
Query: 17 AAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVP 76
A +LS+ + + A +TNNWAVL+ TSRFWFNYRHMAN L YR VKRLG+P
Sbjct: 3 PAFTHLLLLSLILLHVLGAAARTNTNNWAVLLSTSRFWFNYRHMANVLVFYRVVKRLGIP 62
Query: 77 DERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEV 117
D +IILM DD ACN+RN +P VFNN + +LYG++ E+
Sbjct: 63 DSQIILMSYDDQACNSRNLFPGSVFNNSDRAGDLYGEDSEI 103
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Length = 382 |
| >gnl|CDD|216627 pfam01650, Peptidase_C13, Peptidase C13 family | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 126 | |||
| KOG1348 | 477 | consensus Asparaginyl peptidases [Posttranslationa | 100.0 | |
| KOG1349 | 309 | consensus Gpi-anchor transamidase [Posttranslation | 100.0 | |
| PF01650 | 256 | Peptidase_C13: Peptidase C13 family; InterPro: IPR | 100.0 | |
| COG5206 | 382 | GPI8 Glycosylphosphatidylinositol transamidase (GP | 100.0 | |
| COG2949 | 235 | SanA Uncharacterized membrane protein [Function un | 92.97 | |
| PRK10629 | 127 | EnvZ/OmpR regulon moderator; Provisional | 91.87 | |
| KOG1017 | 267 | consensus Predicted uracil phosphoribosyltransfera | 85.03 |
| >KOG1348 consensus Asparaginyl peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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Probab=100.00 E-value=1.5e-39 Score=279.18 Aligned_cols=86 Identities=31% Similarity=0.537 Sum_probs=82.4
Q ss_pred cCCCcEEEEEecCCCccchhhhHHHHHHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCCCccCCceeec
Q 033156 39 MHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVG 118 (126)
Q Consensus 39 ~~~~nwAVlvagS~~w~NYRHqAdv~~~Y~~Lk~~Gi~denIIlm~~DDia~nprNp~pG~if~~~~~~~nlYg~~v~ID 118 (126)
..+.+||||||||+||||||||||+||+||+||++|||+||||+|||||||+||+||+||+|+|.|+|+ ++| ++|..|
T Consensus 42 dggt~waVLVAGSngyyNYRHQADvcHAYqiLrkgGikeEnIvv~MYDDIA~~~~NPrpG~iiN~P~G~-DvY-~GvpkD 119 (477)
T KOG1348|consen 42 DGGTRWAVLVAGSNGYYNYRHQADVCHAYQILRKGGIKEENIVVMMYDDIANNEENPRPGVIINRPNGK-DVY-QGVPKD 119 (477)
T ss_pred cCceeEEEEEecCCcccchhhhhhHHHHHHHHHhcCCCchhEEEEEehhhhcCCCCCCCceeecCCCch-hhh-cCCCCc
Confidence 346999999999999999999999999999999999999999999999999999999999999999995 999 789999
Q ss_pred ccCCcCCC
Q 033156 119 TVFSRYSA 126 (126)
Q Consensus 119 Y~~~~v~~ 126 (126)
|++++|++
T Consensus 120 Ytg~~Vt~ 127 (477)
T KOG1348|consen 120 YTGEDVTP 127 (477)
T ss_pred ccCCcCCH
Confidence 99999984
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| >KOG1349 consensus Gpi-anchor transamidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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| >PF01650 Peptidase_C13: Peptidase C13 family; InterPro: IPR001096 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
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| >COG5206 GPI8 Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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| >COG2949 SanA Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
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| >PRK10629 EnvZ/OmpR regulon moderator; Provisional | Back alignment and domain information |
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| >KOG1017 consensus Predicted uracil phosphoribosyltransferase [General function prediction only] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 126 | |||
| 4af8_A | 367 | Metacaspase MCA2; hydrolase, cysteine peptidase, c | 82.14 |
| >4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A | Back alignment and structure |
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Probab=82.14 E-value=2.6 Score=35.30 Aligned_cols=49 Identities=8% Similarity=0.202 Sum_probs=36.8
Q ss_pred cccCCCcEEEEEecCCCc----cchhhhHHHHHHHHHHHhCCCCCCCEEEEecC
Q 033156 37 TTMHTNNWAVLVCTSRFW----FNYRHMANTLSLYRTVKRLGVPDERIILMLAD 86 (126)
Q Consensus 37 ~~~~~~nwAVlvagS~~w----~NYRHqAdv~~~Y~~Lk~~Gi~denIIlm~~D 86 (126)
....+++||++|+-+.+= -++ =..|+-.+.+.|++.|++.++|.++.-+
T Consensus 87 ~~~~grr~ALlIGIn~Y~~~~~L~g-~vnDA~~m~~~L~~~GF~~~~i~~L~D~ 139 (367)
T 4af8_A 87 PLPGQTVRALFIGINYYGTSAALSG-CCNDVKQMLATLQKRGLPINEAVILVDE 139 (367)
T ss_dssp CCTTCCEEEEEEECCCTTSTTCCSS-HHHHHHHHHHHHHHTTCCCSEEEEEECC
T ss_pred CCCCCCeEEEEEEeCCCCCccCCCC-HHHHHHHHHHHHHHcCCCchheEEeccc
Confidence 345789999999988421 011 2678999999999999999998876643
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Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00