Citrus Sinensis ID: 033514

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------
MSKSNFKIEHEFEKRRAEAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG
cccccccccccHHHHHHHHHHHHHHccccEEEEEEEccccccccccccEEEEEccccHHHHHHHHHHHcccccccEEEEEEccccccccccHHHHHHHccccccEEEEEEccccccc
***SNFK*EHEFEKRRAEAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG
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MSKSNFKIEHEFEKRRAEAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Autophagy-related protein 8 Involved in cytoplasm to vacuole transport (Cvt) vesicles and autophagosomes formation. May mediate the delivery of the vesicles and autophagosomes to the vacuole via the microtubule cytoskeleton.confidentP0CO54
Autophagy-related protein 8 Involved in autophagy, in the development of aerial hyphae, in pigmentation and in the differentiation of female reproductive organs. May be also involved in cytoplasm to vacuole transport (Cvt) vesicles formation (By similarity). May mediate the delivery of the vesicles and autophagosomes to the vacuole via the microtubule cytoskeleton.confidentQ8J282
Autophagy-related protein 8 Involved in cytoplasm to vacuole transport (Cvt) vesicles and autophagosomes formation. May mediate the delivery of the vesicles and autophagosomes to the vacuole via the microtubule cytoskeleton.confidentO94272

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3RUI, chain B
Confidence level:very confident
Coverage over the Query: 5-117
View the alignment between query and template
View the model in PyMOL