Citrus Sinensis ID: 033657


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110----
MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL
cccccccccccccccccccEEEEEcccccEEEEEEEccccEEEEEEcccHHHHHHHccccccHHHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHHccccc
*************NFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEK******GCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
50S ribosomal protein L18 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.probableA1WVA6
50S ribosomal protein L18 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.probableQ3IJK1
50S ribosomal protein L18 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.probableA4XZ74

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1OVY, chain A
Confidence level:very confident
Coverage over the Query: 14-113
View the alignment between query and template
View the model in PyMOL