Citrus Sinensis ID: 033676

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110----
MVTTFGMSEIGPWSLVDGSQSGDVIMRMMARNSMSEKLAADIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPSENRVAPAVPAPLSVSA
cccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccccccccc
MVTTFGMSEIGPWSLVDGSQSGDVIMRMM****MSEKLAADIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEI******************
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MVTTFGMSEIGPWSLVDGSQSGDVIMRMMARNSMSEKLAADIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPSENRVAPAVPAPLSVSA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
ATP-dependent zinc metalloprotease FTSH 2, chloroplastic Probable ATP-dependent zinc metallopeptidase.probableQ655S1
ATP-dependent zinc metalloprotease FTSH 8, chloroplastic Part of a complex that function as an ATP-dependent zinc metallopeptidase. Involved in the thylakoid formation and in the removal of damaged D1 in the photosystem II, preventing cell death under high-intensity light conditions.probableQ8W585

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2CE7, chain A
Confidence level:very confident
Coverage over the Query: 1-17,31-92
View the alignment between query and template
View the model in PyMOL