Citrus Sinensis ID: 033681

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110---
Protein Sequence
MGRKRSILSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSFSS
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHcHHHHHHHccccccEEEEccccccEEEEcccccccccccccHHHHHHHcccccccccccEEEEEcccccEEEEEEccEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccccEcccccccHHHHHHHHHHHccccHHHHcccEEEEcccHHccccEEEEccHHcccccccccHHHHHHHcccccccccccEEEEccccccEEEEEEcccEEcccccEEcc
Coil and Loop (DISEMBL)
mgrkrsilsqcdgdyqHNKIMEMLVVKFLHQTLTdviiptfdirllqpisfsTLKAKRnaskvswlsdncigtsaapyymppyyfemhastgtkkfnlvdgvvaanipvsfss
Flexible Loop (DISEMBL)
mgrkrsilsqcdgdyqHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKrnaskvswlsdnciGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSFSS
Low Complexity Region (SEG)
MGRKRSILSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSFSS
Disordered region (IsUnstruct)
*********QCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPV****
Disordered Region (DISOPRED)
*******LSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSFS*
Disordered Region (DISEMBL)
MGRKRSILSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSFSS
Disordered Region (DISPRO)
****RSILSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSFSS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGRKRSILSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSFSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	113	2.2.26 [Sep-21-2011]
Q2MY48	387	Patatin-03 OS=Solanum tub	N/A	no	0.823	0.240	0.425	6e-14
Q3YJT5	387	Patatin-05 OS=Solanum tub	N/A	no	0.823	0.240	0.414	2e-13
Q2MY44	386	Patatin-07 OS=Solanum tub	N/A	no	0.823	0.240	0.414	2e-13
Q42502	386	Patatin-2-Kuras 3 OS=Sola	N/A	no	0.823	0.240	0.414	5e-13
Q3YJT3	374	Patatin-2-Kuras 1 OS=Sola	N/A	no	0.823	0.248	0.404	5e-13
Q2MY38	387	Patatin-13 OS=Solanum tub	N/A	no	0.823	0.240	0.414	6e-13
P15477	386	Patatin-B2 OS=Solanum tub	N/A	no	0.823	0.240	0.393	2e-12
Q3YJT0	374	Patatin-2-Kuras 4 OS=Sola	N/A	no	0.823	0.248	0.404	2e-12
Q3YJT4	375	Patatin-1-Kuras 2 OS=Sola	N/A	no	0.823	0.248	0.404	2e-12
Q2MY54	387	Patatin group J-1 OS=Sola	N/A	no	0.823	0.240	0.404	3e-12

>sp|Q2MY48|PAT03_SOLTU Patatin-03 OS=Solanum tuberosum PE=2 SV=1

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y    + E L    +HQ LT+V I +FDI+  +P+ F+     R+    + +SD C 
Sbjct: 127 DGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLARSPELDAKMSDICY 186

Query: 72  GTSAAPYYMPPYYFEMHASTGTK-KFNLVDGVVA 104
            T+AAP Y PP+YF  + S G K +FNLVDG VA
Sbjct: 187 STAAAPTYFPPHYFATNTSNGDKYEFNLVDGAVA 220

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.
Solanum tuberosum (taxid: 4113)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q3YJT5|PAT05_SOLTU Patatin-05 OS=Solanum tuberosum GN=pat1-k1 PE=1 SV=1

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y    + E L    +HQ LT+V I +FDI+  +P+ F+     ++    + +SD C 
Sbjct: 127 DGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMSDICY 186

Query: 72  GTSAAPYYMPPYYFEMHASTGTK-KFNLVDGVVA 104
            T+AAP Y PP+YF  + S G K +FNLVDG VA
Sbjct: 187 STAAAPTYFPPHYFATNTSNGDKYEFNLVDGAVA 220

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q2MY44|PAT07_SOLTU Patatin-07 OS=Solanum tuberosum PE=2 SV=1

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y    + E L    +HQ LT+V I +FDI+  +P+ F+     ++    + +SD C 
Sbjct: 126 DGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMSDICY 185

Query: 72  GTSAAPYYMPPYYFEMHASTGTK-KFNLVDGVVA 104
            T+AAP Y PP+YF  + S G K +FNLVDG VA
Sbjct: 186 STAAAPTYFPPHYFATNTSNGDKYEFNLVDGAVA 219

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q42502|PT2K3_SOLTU Patatin-2-Kuras 3 OS=Solanum tuberosum GN=pat2-k3 PE=1 SV=1

 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y    + E L    +HQ LT+V I +FDI+  +P+ F+     ++    + + D C 
Sbjct: 126 DGKYFLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICY 185

Query: 72  GTSAAPYYMPPYYFEMHASTGTK-KFNLVDGVVA 104
            T+AAP Y PP+YF  H S G K +FNLVDG VA
Sbjct: 186 STAAAPTYFPPHYFVTHTSNGDKYEFNLVDGAVA 219

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q3YJT3|PT2K1_SOLTU Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 PE=1 SV=1

 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y    + E L    +HQ LT+V I +FDI+  +P+ F+     ++    + + D C 
Sbjct: 114 DGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICY 173

Query: 72  GTSAAPYYMPPYYFEMHASTGTK-KFNLVDGVVA 104
            T+AAP Y PP+YF  H S G + +FNLVDG VA
Sbjct: 174 STAAAPIYFPPHYFVTHTSNGDRYEFNLVDGAVA 207

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q2MY38|PAT13_SOLTU Patatin-13 OS=Solanum tuberosum PE=2 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y      E L    +HQ LT+V I +FDI+  +P+ F+     ++    + +SD C 
Sbjct: 127 DGKYLMQVPQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMSDICY 186

Query: 72  GTSAAPYYMPPYYFEMHASTGTK-KFNLVDGVVA 104
            T+AAP Y PP+YF  + S G K +FNLVDG VA
Sbjct: 187 STAAAPTYFPPHYFATNTSNGDKYEFNLVDGAVA 220

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P15477|PATB2_SOLTU Patatin-B2 OS=Solanum tuberosum GN=PATB2 PE=1 SV=1

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y    + E L    +HQ LT+V I +FDI+  +P+ F+     ++    + + D C 
Sbjct: 126 DGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICY 185

Query: 72  GTSAAPYYMPPYYFEMHASTGTK-KFNLVDGVVA 104
            T+AAP Y PP++F  H S G + +FNLVDG VA
Sbjct: 186 STAAAPIYFPPHHFVTHTSNGARYEFNLVDGAVA 219

Lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens. Can use p-nitrophenyl esters as substrats with highest activity on p-nitrophenyl caprate (C10). Also active on mono-acylglycolphosphocholines and diacylphospholipids, with highest specific activities observed were obtained with the synthetic phospholipids diC8PCho and diC9PCho. Mono-olein and myverol can also be hydrolyzed.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q3YJT0|PT2K4_SOLTU Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y    + E L    +HQ LT+V I +FDI+  +P+ F+      +    + + D C 
Sbjct: 114 DGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAESPQLDAKMYDICY 173

Query: 72  GTSAAPYYMPPYYFEMHASTGTK-KFNLVDGVVA 104
            T+AAP Y PP+YF  H S G + +FNLVDG VA
Sbjct: 174 STAAAPIYFPPHYFVTHTSNGDRYEFNLVDGGVA 207

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q3YJT4|PT1K2_SOLTU Patatin-1-Kuras 2 OS=Solanum tuberosum GN=pat1-k2 PE=1 SV=1

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y    + E L    +HQ LT+V I +FDI+  +P+ F+     ++    + + D C 
Sbjct: 115 DGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICY 174

Query: 72  GTSAAPYYMPPYYFEMHASTGTK-KFNLVDGVVA 104
            T+AAP Y PP+YF  +   G K KFNLVDG VA
Sbjct: 175 STAAAPTYFPPHYFATNTINGDKYKFNLVDGAVA 208

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q2MY54|PATJ1_SOLTU Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y    + E L    +HQ LT+V I +FDI+  +P+ F+     ++    + + D C 
Sbjct: 127 DGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICY 186

Query: 72  GTSAAPYYMPPYYFEMHASTG-TKKFNLVDGVVA 104
            T+AAP Y PP++F  H S G T +FNLVDG VA
Sbjct: 187 STAAAPIYFPPHHFVTHTSNGATYEFNLVDGGVA 220

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	113
302142341	460	unnamed protein product [Vitis vinifera]	0.858	0.210	0.571	2e-22
225458565	425	PREDICTED: patatin group A-3 [Vitis vini	0.858	0.228	0.571	2e-22
224063539	405	predicted protein [Populus trichocarpa]	0.858	0.239	0.571	5e-22
302142349	467	unnamed protein product [Vitis vinifera]	0.867	0.209	0.555	5e-22
125536953	435	hypothetical protein OsI_38653 [Oryza sa	0.858	0.222	0.545	6e-22
225458555	413	PREDICTED: patatin group A-3-like [Vitis	0.867	0.237	0.555	6e-22
147861175	390	hypothetical protein VITISV_028107 [Viti	0.858	0.248	0.561	6e-22
225458561	444	PREDICTED: patatin-T5-like [Vitis vinife	0.867	0.220	0.555	6e-22
302142345	413	unnamed protein product [Vitis vinifera]	0.867	0.237	0.555	7e-22
147768494	413	hypothetical protein VITISV_001725 [Viti	0.867	0.237	0.555	1e-21

>gi|302142341|emb|CBI19544.3| unnamed protein product [Vitis vinifera]

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 1/98 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y HN + E L    LHQTLT+V+IPTFDI+ LQP  FST + K   S  + LSD CI
Sbjct: 174 DGKYLHNLVKEKLGETQLHQTLTNVVIPTFDIKCLQPTIFSTYQVKSRPSLDALLSDICI 233

Query: 72  GTSAAPYYMPPYYFEMHASTG-TKKFNLVDGVVAANIP 108
           GTSAAP Y+P +YFE    TG  ++FNL+DG VAAN P
Sbjct: 234 GTSAAPTYLPAHYFETKDPTGRVREFNLIDGGVAANNP 271

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458565|ref|XP_002284571.1| PREDICTED: patatin group A-3 [Vitis vinifera]

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 1/98 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y HN + E L    LHQTLT+V+IPTFDI+ LQP  FST + K   S  + LSD CI
Sbjct: 139 DGKYLHNLVKEKLGETQLHQTLTNVVIPTFDIKCLQPTIFSTYQVKSRPSLDALLSDICI 198

Query: 72  GTSAAPYYMPPYYFEMHASTG-TKKFNLVDGVVAANIP 108
           GTSAAP Y+P +YFE    TG  ++FNL+DG VAAN P
Sbjct: 199 GTSAAPTYLPAHYFETKDPTGRVREFNLIDGGVAANNP 236

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063539|ref|XP_002301194.1| predicted protein [Populus trichocarpa] gi|222842920|gb|EEE80467.1| predicted protein [Populus trichocarpa]

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 56/98 (57%), Positives = 68/98 (69%), Gaps = 1/98 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y H+ + E L  K LHQTLT+V+IPTFDI+ LQP  FS+ + K + S  + LSD CI
Sbjct: 124 DGKYLHSIVKEKLGEKRLHQTLTNVVIPTFDIKYLQPTIFSSYQVKNDPSTDALLSDICI 183

Query: 72  GTSAAPYYMPPYYFEMHASTG-TKKFNLVDGVVAANIP 108
           GTSAAP Y+P +YFE   S G  + FNLVDG VAAN P
Sbjct: 184 GTSAAPTYLPAHYFETKDSEGKVRGFNLVDGGVAANNP 221

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142349|emb|CBI19552.3| unnamed protein product [Vitis vinifera]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 66/99 (66%), Gaps = 1/99 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y HN + E L    LHQTLT+V+IPTFDI+ LQP  FST + K   S  + LSD CI
Sbjct: 181 DGKYLHNLVKEKLGETRLHQTLTNVVIPTFDIKRLQPTIFSTYQVKSRPSLDALLSDICI 240

Query: 72  GTSAAPYYMPPYYFEMHASTG-TKKFNLVDGVVAANIPV 109
           GTSAAP Y+P +YFE     G  ++FNL+DG VAAN P 
Sbjct: 241 GTSAAPTYLPAHYFETKDPAGRVREFNLIDGGVAANNPT 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125536953|gb|EAY83441.1| hypothetical protein OsI_38653 [Oryza sativa Indica Group]

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/99 (54%), Positives = 70/99 (70%), Gaps = 2/99 (2%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y  + + E+L    +  TLT+V+IPTFD+RLLQP+ FST  AK +  K + LSD CI
Sbjct: 141 DGRYLRDMVREVLGETTVDGTLTNVVIPTFDVRLLQPVIFSTYDAKNSTLKNARLSDVCI 200

Query: 72  GTSAAPYYMPPYYFEMH--ASTGTKKFNLVDGVVAANIP 108
           GTSAAP Y+P +YFE H  AS  T+++NL+DG VAAN P
Sbjct: 201 GTSAAPTYLPAHYFETHDAASGETREYNLIDGGVAANNP 239

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458555|ref|XP_002282481.1| PREDICTED: patatin group A-3-like [Vitis vinifera]

 Score =  107 bits (268), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 66/99 (66%), Gaps = 1/99 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y HN + E L    LHQTLT+V+IPTFDI+ LQP  FST + K   S  + LSD CI
Sbjct: 127 DGKYLHNLVKEKLGETRLHQTLTNVVIPTFDIKRLQPTIFSTYQVKSRPSLDALLSDICI 186

Query: 72  GTSAAPYYMPPYYFEMHASTG-TKKFNLVDGVVAANIPV 109
           GTSAAP Y+P +YFE     G  ++FNL+DG VAAN P 
Sbjct: 187 GTSAAPTYLPAHYFETKDPAGRVREFNLIDGGVAANNPT 225

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147861175|emb|CAN80453.1| hypothetical protein VITISV_028107 [Vitis vinifera]

 Score =  107 bits (268), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 1/98 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y HN + E L    LHQTLT+V+IPTFDI+ LQP  FST + K   S  + LSD CI
Sbjct: 127 DGKYLHNLVKEKLGETRLHQTLTNVVIPTFDIKRLQPTIFSTYQVKSRPSLDALLSDICI 186

Query: 72  GTSAAPYYMPPYYFEMHASTG-TKKFNLVDGVVAANIP 108
           GTSAAP Y+P +YFE     G  ++FNL+DG VAAN P
Sbjct: 187 GTSAAPTYLPAHYFETKDPAGRVREFNLIDGGVAANNP 224

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458561|ref|XP_002282546.1| PREDICTED: patatin-T5-like [Vitis vinifera]

 Score =  107 bits (268), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 66/99 (66%), Gaps = 1/99 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y HN + E L    LHQTLT+V+IPTFDI+ LQP  FST + K   S  + LSD CI
Sbjct: 127 DGKYLHNLVKEKLGETRLHQTLTNVVIPTFDIKRLQPTIFSTYQVKSRPSLDALLSDICI 186

Query: 72  GTSAAPYYMPPYYFEMHASTG-TKKFNLVDGVVAANIPV 109
           GTSAAP Y+P +YFE     G  ++FNL+DG VAAN P 
Sbjct: 187 GTSAAPTYLPAHYFETKDPAGRVREFNLIDGGVAANNPT 225

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142345|emb|CBI19548.3| unnamed protein product [Vitis vinifera]

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 66/99 (66%), Gaps = 1/99 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y HN + E L    LHQTLT+V+IPTFDI+ LQP  FST + K   S  + LSD CI
Sbjct: 127 DGKYLHNLVKEKLGETRLHQTLTNVVIPTFDIKRLQPTIFSTYQVKSRPSLDALLSDICI 186

Query: 72  GTSAAPYYMPPYYFEMHASTG-TKKFNLVDGVVAANIPV 109
           GTSAAP Y+P +YFE     G  ++FNL+DG VAAN P 
Sbjct: 187 GTSAAPTYLPAHYFETKDPAGRVREFNLIDGGVAANNPT 225

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147768494|emb|CAN76066.1| hypothetical protein VITISV_001725 [Vitis vinifera]

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 66/99 (66%), Gaps = 1/99 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y HN + E L    LHQTLT+V+IPTFDI+ LQP  FST + K   S  + LSD CI
Sbjct: 127 DGKYLHNLVKEKLGETRLHQTLTNVVIPTFDIKRLQPTIFSTYQVKSRPSLDALLSDICI 186

Query: 72  GTSAAPYYMPPYYFEMHASTG-TKKFNLVDGVVAANIPV 109
           GTSAAP Y+P +YFE     G  ++FNL+DG VAAN P 
Sbjct: 187 GTSAAPTYLPAHYFETKDPAGRVREFNLIDGGVAANNPT 225

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	113
TAIR|locus:2158337	401	AT5G43590 [Arabidopsis thalian	0.840	0.236	0.515	8.3e-19
TAIR|locus:2114995	414	PLP1 [Arabidopsis thaliana (ta	0.849	0.231	0.505	1.6e-18
TAIR|locus:2066286	407	PLA2A "phospholipase A 2A" [Ar	0.858	0.238	0.479	7e-17
TAIR|locus:2115065	428	PLP4 "AT4G37050" [Arabidopsis	0.858	0.226	0.459	1.3e-15

TAIR|locus:2158337 AT5G43590 [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 50/97 (51%), Positives = 65/97 (67%)

Query:    12 DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
             +G+Y H ++ E+L    L QTLT+V+IPTFDI+ LQP  FS+  A  + S  + LSD CI
Sbjct:   119 NGEYLHTRLGEILGETKLDQTLTNVVIPTFDIKKLQPTIFSSYHASVDPSLNAKLSDICI 178

Query:    72 GTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIP 108
             GTSAAP+Y+PPY F  +    T  FNL+DG V AN P
Sbjct:   179 GTSAAPFYLPPYKFPENDKMRT--FNLIDGGVTANDP 213

GO:0005634 "nucleus" evidence=ISM

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0045735 "nutrient reservoir activity" evidence=ISS

TAIR|locus:2114995 PLP1 [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 1.6e-18, P = 1.6e-18
 Identities = 49/97 (50%), Positives = 63/97 (64%)

Query:    13 GDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIG 72
             G Y  N + ++L    LHQTLT+++IPTFDI+ LQP  FS+ +   + S    +SD CIG
Sbjct:   127 GKYLRNLLSKLLGETRLHQTLTNIVIPTFDIKKLQPTIFSSYQLLVDPSLDVKVSDICIG 186

Query:    73 TSAAPYYMPPYYFEMHASTGTK-KFNLVDGVVAANIP 108
             TSAAP + PP+YF    S G K +FNLVDG V AN P
Sbjct:   187 TSAAPTFFPPHYFSNEDSQGNKTEFNLVDGAVTANNP 223

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0045735 "nutrient reservoir activity" evidence=ISS

GO:0004620 "phospholipase activity" evidence=IDA

GO:0010311 "lateral root formation" evidence=IMP

TAIR|locus:2066286 PLA2A "phospholipase A 2A" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 7.0e-17, P = 7.0e-17
 Identities = 47/98 (47%), Positives = 63/98 (64%)

Query:    12 DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
             DG Y H  I   L    L QTLT+V+IPTFDI+ LQP  FS+ + K +  K + L+D  I
Sbjct:   126 DGKYLHQLIHAKLGDTKLSQTLTNVVIPTFDIKHLQPTIFSSYEVKNHPLKDATLADIAI 185

Query:    72 GTSAAPYYMPPYYFEMHASTGT-KKFNLVDGVVAANIP 108
              TSAAP Y+P ++F++    G  K++NL+DG VAAN P
Sbjct:   186 STSAAPTYLPAHFFKVEDLNGNAKEYNLIDGGVAANNP 223

GO:0006629 "lipid metabolic process" evidence=IEA;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0045735 "nutrient reservoir activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009626 "plant-type hypersensitive response" evidence=IEP;IMP

GO:0016020 "membrane" evidence=IDA

GO:0016298 "lipase activity" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0008219 "cell death" evidence=IGI

GO:0031408 "oxylipin biosynthetic process" evidence=IMP

GO:0051607 "defense response to virus" evidence=IMP

GO:0071456 "cellular response to hypoxia" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009646 "response to absence of light" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0051707 "response to other organism" evidence=RCA

TAIR|locus:2115065 PLP4 "AT4G37050" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 45/98 (45%), Positives = 62/98 (63%)

Query:    12 DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
             +G Y H+ +   L    L Q+LT+V+IP FDI+ LQP+ FS+ +A  N +  + LSD CI
Sbjct:   150 NGKYLHDLVEGFLGDTKLTQSLTNVVIPCFDIKKLQPVIFSSYQAVNNQAMNAKLSDICI 209

Query:    72 GTSAAPYYMPPYYFEMHASTGTK-KFNLVDGVVAANIP 108
              TSAAP + P + F    S G K +FNL+DG +AAN P
Sbjct:   210 STSAAPTFFPAHRFTNEDSEGIKHEFNLIDGGIAANNP 247


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.134   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      113       113   0.00091  102 3  11 22  0.42    30
                                                     29  0.44    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  127 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.85u 0.12s 10.97t   Elapsed:  00:00:00
  Total cpu time:  10.86u 0.12s 10.98t   Elapsed:  00:00:00
  Start:  Thu May  9 23:09:17 2013   End:  Thu May  9 23:09:17 2013

GO:0005575 "cellular_component" evidence=ND

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0045735 "nutrient reservoir activity" evidence=ISS

GO:0004620 "phospholipase activity" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	113
cd07214	349	cd07214, Pat17_isozyme_like, Patatin-like phosphol	1e-38
cd07215	329	cd07215, Pat17_PNPLA8_PNPLA9_like2, Patatin-like p	7e-09
COG3621	394	COG3621, COG3621, Patatin [General function predic	1e-08
cd07199	258	cd07199, Pat17_PNPLA8_PNPLA9_like, Patatin-like ph	5e-08

>gnl|CDD|132853 cd07214, Pat17_isozyme_like, Patatin-like phospholipase of plants

 Score =  131 bits (332), Expect = 1e-38
 Identities = 52/98 (53%), Positives = 66/98 (67%), Gaps = 1/98 (1%)

Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y H+ + E+L    L  TLT+V+IPTFDI+LLQP+ FS+ KAK +    + L+D CI
Sbjct: 111 DGVYLHDLLNELLGDTRLSDTLTNVVIPTFDIKLLQPVIFSSSKAKNDKLTNARLADVCI 170

Query: 72  GTSAAPYYMPPYYFEMHASTG-TKKFNLVDGVVAANIP 108
            TSAAP Y P +YF    S G  ++FNLVDG VAAN P
Sbjct: 171 STSAAPTYFPAHYFTTEDSNGDIREFNLVDGGVAANNP 208

Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates. Length = 349

>gnl|CDD|132854 cd07215, Pat17_PNPLA8_PNPLA9_like2, Patatin-like phospholipase of bacteria

 Score = 51.3 bits (123), Expect = 7e-09
 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 7/98 (7%)

Query: 15  YQHNKIMEMLVVKFLHQTLTDVIIP----TFDIRLLQPISFSTLKAKRNASKVSWLSDNC 70
           Y H  + E+L+  F    L++++ P    ++DI    P  F +  A +N  +  ++ D  
Sbjct: 104 YSHKPLEEVLLEYFGDTKLSELLKPCLITSYDIERRSPHFFKSHTAIKNEQRDFYVRDVA 163

Query: 71  IGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIP 108
             TSAAP Y  P       S   +K+ L+DG V AN P
Sbjct: 164 RATSAAPTYFEPARIH---SLTGEKYTLIDGGVFANNP 198

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum. Length = 329

>gnl|CDD|226148 COG3621, COG3621, Patatin [General function prediction only]

 Score = 50.7 bits (121), Expect = 1e-08
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 4/76 (5%)

Query: 35  DVIIPTFDIRLLQP--ISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHASTG 92
            V++P +D+   +    +FST  A+ +      LSD  + ++AAP Y PP++FE    T 
Sbjct: 131 RVVVPGYDLNNQKNPLFTFSTHHARPSRYNNYKLSDIILASTAAPTYFPPHHFE--NITN 188

Query: 93  TKKFNLVDGVVAANIP 108
           TK   ++DG V AN P
Sbjct: 189 TKYHPIIDGGVVANNP 204

Length = 394

>gnl|CDD|132838 cd07199, Pat17_PNPLA8_PNPLA9_like, Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17

 Score = 48.9 bits (117), Expect = 5e-08
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 36  VIIPTFDIRLLQPISFSTLKAKRNASKVSW-LSDNCIGTSAAPYYMPPYYFEMHASTGTK 94
           V++  +D+   +P+ FS   A+       + L D    TSAAP Y PP   E    +G  
Sbjct: 76  VLVTAYDLSTGKPVVFSNYDAEEPDDDDDFKLWDVARATSAAPTYFPPAVIE----SGGD 131

Query: 95  KFNLVDGVVAANIPV 109
           +   VDG VAAN P 
Sbjct: 132 EGAFVDGGVAANNPA 146

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum. Length = 258

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	113
cd07214	349	Pat17_isozyme_like Patatin-like phospholipase of p	99.97
cd07215	329	Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipa	99.96
cd07217	344	Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipa	99.93
COG3621	394	Patatin [General function prediction only]	99.91
cd07211	308	Pat_PNPLA8 Patatin-like phospholipase domain conta	99.9
cd07216	309	Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipa	99.9
cd07213	288	Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipa	99.88
cd07212	312	Pat_PNPLA9 Patatin-like phospholipase domain conta	99.88
cd07207	194	Pat_ExoU_VipD_like ExoU and VipD-like proteins; ho	99.84
cd07205	175	Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholi	99.83
cd07199	258	Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipas	99.81
cd07228	175	Pat_NTE_like_bacteria Bacterial patatin-like phosp	99.8
cd07225	306	Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domai	99.78
cd07210	221	Pat_hypo_W_succinogenes_WS1459_like Hypothetical p	99.77
KOG4231	763	consensus Intracellular membrane-bound Ca2+-indepe	99.74
PRK10279	300	hypothetical protein; Provisional	99.64
cd07208	266	Pat_hypo_Ecoli_yjju_like Hypothetical patatin simi	99.63
cd07209	215	Pat_hypo_Ecoli_Z1214_like Hypothetical patatin sim	99.62
cd07227	269	Pat_Fungal_NTE1 Fungal patatin-like phospholipase	99.62
cd07222	246	Pat_PNPLA4 Patatin-like phospholipase domain conta	99.55
cd07198	172	Patatin Patatin-like phospholipase. Patatin is a s	99.55
cd07218	245	Pat_iPLA2 Calcium-independent phospholipase A2; Cl	99.53
cd07204	243	Pat_PNPLA_like Patatin-like phospholipase domain c	99.51
COG1752	306	RssA Predicted esterase of the alpha-beta hydrolas	99.48
PF01734	204	Patatin: Patatin-like phospholipase This Prosite f	99.47
cd07221	252	Pat_PNPLA3 Patatin-like phospholipase domain conta	99.44
cd07219	382	Pat_PNPLA1 Patatin-like phospholipase domain conta	99.42
cd07220	249	Pat_PNPLA2 Patatin-like phospholipase domain conta	99.36
cd07232	407	Pat_PLPL Patain-like phospholipase. Patatin-like p	99.34
cd07230	421	Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TG	99.3
cd07224	233	Pat_like Patatin-like phospholipase. Patatin-like	99.25
cd07223	405	Pat_PNPLA5-mammals Patatin-like phospholipase doma	99.19
KOG0513	503	consensus Ca2+-independent phospholipase A2 [Lipid	99.17
cd07231	323	Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar	99.02
cd07206	298	Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and	98.99
TIGR03607	739	patatin-related protein. This bacterial protein fa	98.91
cd01819	155	Patatin_and_cPLA2 Patatins and Phospholipases. Pat	98.84
COG4667	292	Predicted esterase of the alpha-beta hydrolase sup	98.48
cd07229	391	Pat_TGL3_like Triacylglycerol lipase 3. Triacylgly	98.47
KOG0513	503	consensus Ca2+-independent phospholipase A2 [Lipid	97.6
KOG2968	1158	consensus Predicted esterase of the alpha-beta hyd	97.55
KOG3773	354	consensus Adiponutrin and related vesicular transp	97.17
KOG2214	543	consensus Predicted esterase of the alpha-beta hyd	95.21

>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants

Probab=99.97  E-value=1.4e-30  Score=201.50  Aligned_cols=108  Identities=48%  Similarity=0.722  Sum_probs=95.4

Q ss_pred             ccCccCCChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceE
Q 033681            5 RSILSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYY   84 (113)
Q Consensus         5 ~~~~~~y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~   84 (113)
                      ++..++|+++.|+++|+++||+.+|.|+.++++|||+|+.+++|++|++++...+...+.+||||||||||||+||||++
T Consensus       104 ~~~~~~y~~~~L~~~L~~~~gd~~l~d~~~~v~I~a~dl~~~~p~~F~~~~~~~~~~~~~~l~da~rASSAaPtyFpp~~  183 (349)
T cd07214         104 SLLGPKYDGVYLHDLLNELLGDTRLSDTLTNVVIPTFDIKLLQPVIFSSSKAKNDKLTNARLADVCISTSAAPTYFPAHY  183 (349)
T ss_pred             HhccCccCcHHHHHHHHHHhccccHhhhCCceEEEeEECCCCCeEEEeCccccCCcccCcCHHHHHHHhcccccccCCeE
Confidence            34679999999999999999999999999999999999999999999999876656678999999999999999999999


Q ss_pred             EEecCCCC-CeeeeEecceeecCCCCCcC
Q 033681           85 FEMHASTG-TKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        85 ~~~~~~~g-~~~~~~vDGGl~aNnP~~~~  112 (113)
                      +.+..+.| .+++.||||||++|||+++|
T Consensus       184 i~~~~~~g~~~~~~~vDGGv~aNNP~~~A  212 (349)
T cd07214         184 FTTEDSNGDIREFNLVDGGVAANNPTLLA  212 (349)
T ss_pred             eecccCCCCcceEEEecCceecCCHHHHH
Confidence            97643223 24568999999999998765

Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.

>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria

Probab=99.96  E-value=2.1e-29  Score=193.15  Aligned_cols=107  Identities=26%  Similarity=0.349  Sum_probs=95.0

Q ss_pred             ccccCccCCChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCc
Q 033681            3 RKRSILSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPP   82 (113)
Q Consensus         3 ~~~~~~~~y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p   82 (113)
                      +.+++.++|+++.|+++|+++||+.+|.|+.++++|+++|+.+++|++|+++....++..++++|||||||||||+||||
T Consensus        96 ~~~~~~~~y~~~~L~~~L~~~fg~~~l~d~~~~~~i~a~d~~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~~F~p  175 (329)
T cd07215          96 RGGFLNEKYSHKPLEEVLLEYFGDTKLSELLKPCLITSYDIERRSPHFFKSHTAIKNEQRDFYVRDVARATSAAPTYFEP  175 (329)
T ss_pred             hccccccccCcHHHHHHHHHHhCCCchhhhcCCceEEeeecCCCCceEecCcccCCCcccCccHHHHhHHHhhcccccCc
Confidence            34677899999999999999999999999999999999999999999999987654456788999999999999999999


Q ss_pred             eEEEecCCCCCeeeeEecceeecCCCCCcC
Q 033681           83 YYFEMHASTGTKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        83 ~~~~~~~~~g~~~~~~vDGGl~aNnP~~~~  112 (113)
                      +++.+.+  | .++.|||||+++|||+++|
T Consensus       176 ~~i~~~~--g-~~~~~vDGGv~aNnP~~~a  202 (329)
T cd07215         176 ARIHSLT--G-EKYTLIDGGVFANNPTLCA  202 (329)
T ss_pred             eEeecCC--C-cEEEEecCceecCCHHHHH
Confidence            9997542  3 4567999999999998765

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase

Probab=99.93  E-value=1.1e-25  Score=173.97  Aligned_cols=100  Identities=22%  Similarity=0.197  Sum_probs=83.6

Q ss_pred             CCChHHHHHHHHHHhccccccc--cccceEEEEEecCCCccEEeeCCCCC-------cCCCCCccHHHHHhHhccCCCCc
Q 033681           10 QCDGDYQHNKIMEMLVVKFLHQ--TLTDVIIPTFDIRLLQPISFSTLKAK-------RNASKVSWLSDNCIGTSAAPYYM   80 (113)
Q Consensus        10 ~y~~~~l~~~L~~~~g~~~l~d--~~~~v~i~a~di~~~~~~~f~~~~~~-------~~~~~~~~l~da~~ASsAaP~yF   80 (113)
                      +|+++.|+++|+++||+.+|.|  +.++++|+++|+.++++++|+++...       .+...+.+||||||||||||+||
T Consensus        96 ~y~~~~L~~~L~~~fg~~~l~d~~~~~~l~i~a~dl~tg~p~~f~~~~~~~~~~~~~~~~~~~~~L~da~rASsAaPt~F  175 (344)
T cd07217          96 QYDPTNLGKKLNTVFPETTLGDDTLRTLLMIVTRNATTGSPWPVCNNPEAKYNDSDRSDCNLDLPLWQLVRASTAAPTFF  175 (344)
T ss_pred             ccCcHHHHHHHHHHcCceeecccccCceEEEEEEecCCCCeeEeecCchhhcccccccCcccCCcHHHHHHHHccCcccc
Confidence            4999999999999999999998  44789999999999999999986421       11345789999999999999999


Q ss_pred             CceEEEecCCCCCeeeeEecceee-cCCCCCcC
Q 033681           81 PPYYFEMHASTGTKKFNLVDGVVA-ANIPVSFS  112 (113)
Q Consensus        81 ~p~~~~~~~~~g~~~~~~vDGGl~-aNnP~~~~  112 (113)
                      ||+.+...+  | .++.||||||+ +|||+++|
T Consensus       176 pP~~i~~~~--~-~~~~lVDGGv~aaNNP~l~A  205 (344)
T cd07217         176 PPEVVSIAP--G-TAFVFVDGGVTTYNNPAFQA  205 (344)
T ss_pred             CceEEEecC--C-ceEEEECCccccccCHHHHH
Confidence            999885422  2 36789999999 69998754

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>COG3621 Patatin [General function prediction only]

Probab=99.91  E-value=9.3e-25  Score=166.38  Aligned_cols=103  Identities=24%  Similarity=0.285  Sum_probs=90.0

Q ss_pred             cCccCCChHHHHHHHHHHhccccccccccceEEEEEecCCCc-cEEeeC-CCCCcCCCCCccHHHHHhHhccCCCCcCce
Q 033681            6 SILSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQ-PISFST-LKAKRNASKVSWLSDNCIGTSAAPYYMPPY   83 (113)
Q Consensus         6 ~~~~~y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~-~~~f~~-~~~~~~~~~~~~l~da~~ASsAaP~yF~p~   83 (113)
                      +++|||++++|-++|+-+.+|.+|.|+..+|+||.+|+.+.+ |.+|.+ +++..+.+.+++|||+|+||||||+||||+
T Consensus       102 ~~~pkys~~pLiK~lk~~~~D~tlkDL~~~Vvv~~~~l~~~knp~~t~~~~~~~~~ry~~~~LsDii~~stAAPtyFp~h  181 (394)
T COG3621         102 LFSPKYSPQPLIKLLKFVCKDYTLKDLIGRVVVPGYDLNNQKNPLFTFSTHHARPSRYNNYKLSDIILASTAAPTYFPPH  181 (394)
T ss_pred             hcCCcCCchhHHHHHHHhccccchhhhccceEEEeeecccccCCceeecccCccccccccchHHHHHHhcccCCcccCcc
Confidence            578999999999999988899999999999999999999988 655544 455455578999999999999999999999


Q ss_pred             EEEecCCCCCeeeeEecceeecCCCCC
Q 033681           84 YFEMHASTGTKKFNLVDGVVAANIPVS  110 (113)
Q Consensus        84 ~~~~~~~~g~~~~~~vDGGl~aNnP~~  110 (113)
                      ++.+..  .++-+.+|||||.||||++
T Consensus       182 ~~~~i~--~~k~~~~iDGGv~ANnPsl  206 (394)
T COG3621         182 HFENIT--NTKYHPIIDGGVVANNPSL  206 (394)
T ss_pred             cccccc--cccceeeecceeeecChhH
Confidence            998776  2356789999999999984

>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8

Probab=99.90  E-value=4.6e-24  Score=162.05  Aligned_cols=98  Identities=21%  Similarity=0.168  Sum_probs=79.4

Q ss_pred             CccCCChHHHHHHHHHHhccccccccc----c-ceEEEEE--ecCCCccEEeeCCCCCcCC------CCCccHHHHHhHh
Q 033681            7 ILSQCDGDYQHNKIMEMLVVKFLHQTL----T-DVIIPTF--DIRLLQPISFSTLKAKRNA------SKVSWLSDNCIGT   73 (113)
Q Consensus         7 ~~~~y~~~~l~~~L~~~~g~~~l~d~~----~-~v~i~a~--di~~~~~~~f~~~~~~~~~------~~~~~l~da~~AS   73 (113)
                      ..++|+++.||++|+++||+.+|.|..    + +++++++  |..+.+|++|+||+...+.      ..+.++|||+|||
T Consensus        95 ~~~~y~~~~l~~~l~~~~g~~~l~~~~~~~~~p~~~v~st~~~~~~~~p~~f~ny~~~~~~~~~~~~~~~~~l~dA~rAS  174 (308)
T cd07211          95 SHAYYDTETWEKILKEMMGSDELIDTSADPNCPKVACVSTQVNRTPLKPYVFRNYNHPPGTRSHYLGSCKHKLWEAIRAS  174 (308)
T ss_pred             cCCccChHHHHHHHHHHhCCccccccccCCCCCEEEEEEEeccCCCCceEEEeCCCCCCCcccccCCcccccHHHHHHHh
Confidence            368999999999999999999988753    2 3555665  4557799999999754321      3467999999999


Q ss_pred             ccCCCCcCceEEEecCCCCCeeeeEecceeecCCCCCcC
Q 033681           74 SAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        74 sAaP~yF~p~~~~~~~~~g~~~~~~vDGGl~aNnP~~~~  112 (113)
                      ||||+||||+++++        ..|||||+.+|||+.+|
T Consensus       175 sAaP~~F~p~~i~~--------~~~vDGGv~aNnP~~~a  205 (308)
T cd07211         175 SAAPGYFEEFKLGN--------NLHQDGGLLANNPTALA  205 (308)
T ss_pred             ccchhcCCcEEECC--------CeEEECCcccCCcHHHH
Confidence            99999999998843        26999999999998764

PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.

>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase

Probab=99.90  E-value=8.7e-24  Score=160.79  Aligned_cols=100  Identities=19%  Similarity=0.141  Sum_probs=84.3

Q ss_pred             CccCCChHHHHHHHHHHhcccccc---------ccccceEEEEEecC-CCccEEeeCCCCCcCC--CCCccHHHHHhHhc
Q 033681            7 ILSQCDGDYQHNKIMEMLVVKFLH---------QTLTDVIIPTFDIR-LLQPISFSTLKAKRNA--SKVSWLSDNCIGTS   74 (113)
Q Consensus         7 ~~~~y~~~~l~~~L~~~~g~~~l~---------d~~~~v~i~a~di~-~~~~~~f~~~~~~~~~--~~~~~l~da~~ASs   74 (113)
                      ..++|+.+.++++|+++|++..+.         +..++++|++++++ +++|++|++|+.....  ..+.++||||||||
T Consensus        95 ~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~~~~~f~~y~~~~~~~~~~~~~l~~a~rASs  174 (309)
T cd07216          95 TGARFDSKKLAEAIKVILKELGNDEDDLLDEGEEDGCKVFVCATDKDVTGKAVRLRSYPSKDEPSLYKNATIWEAARATS  174 (309)
T ss_pred             cCCCCChHHHHHHHHHHHHhcCCCchhhhccccccCCCEEEEEEeeCCCCceEEEecCCCCCCCCcccCccHHHHHHHHh
Confidence            357899999999999999977654         24568999999998 9999999999865432  56889999999999


Q ss_pred             cCCCCcCceEEEecCCCCCeeeeEecceeecCCCCCcC
Q 033681           75 AAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        75 AaP~yF~p~~~~~~~~~g~~~~~~vDGGl~aNnP~~~~  112 (113)
                      |||+||+|+++..      ....|+|||+.+|||+..|
T Consensus       175 AaP~~f~p~~~~~------~~~~~vDGGv~~NnP~~~a  206 (309)
T cd07216         175 AAPTFFDPVKIGP------GGRTFVDGGLGANNPIREV  206 (309)
T ss_pred             hhHhhCCCEEecC------CCceEecCCcccCCcHHHH
Confidence            9999999999841      2347999999999998765

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase

Probab=99.88  E-value=4.8e-23  Score=155.49  Aligned_cols=92  Identities=26%  Similarity=0.337  Sum_probs=79.6

Q ss_pred             CccCCChH-HHHHHHHHHhccccccccccceEEEEEecCCCc--------cEEeeCCCCCcCCCCCccHHHHHhHhccCC
Q 033681            7 ILSQCDGD-YQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQ--------PISFSTLKAKRNASKVSWLSDNCIGTSAAP   77 (113)
Q Consensus         7 ~~~~y~~~-~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~--------~~~f~~~~~~~~~~~~~~l~da~~ASsAaP   77 (113)
                      ...+|..+ .++++++++|++.+|.|+.++++||++|+.+++        +++|+|+...  ...+.++|||++||||||
T Consensus        82 ~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~~~~~~~~~~~~~~~~~~f~n~~~~--~~~~~~l~d~~~ASsAaP  159 (288)
T cd07213          82 GNNQYFAAGFLKAFAEVFFGDLTLGDLKRKVLVPSFQLDSGKDDPNRRWKPKLFHNFPGE--PDLDELLVDVCLRSSAAP  159 (288)
T ss_pred             ccccCCchHHHHHHHHHHhCcCCHhhcCCCEEEEEEeccCCCCCccccccceEeecCCCC--CCccccHHHHHHHhcccc
Confidence            34566666 899999999999999999999999999999886        6999987642  345789999999999999


Q ss_pred             CCcCceEEEecCCCCCeeeeEecceeecCCCCCcC
Q 033681           78 YYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        78 ~yF~p~~~~~~~~~g~~~~~~vDGGl~aNnP~~~~  112 (113)
                      +||||+     .       .|||||+.+|||+++|
T Consensus       160 ~~F~p~-----~-------~~iDGGv~~NnP~~~a  182 (288)
T cd07213         160 TYFPSY-----Q-------GYVDGGVFANNPSLCA  182 (288)
T ss_pred             ccchhh-----h-------ceecceeecCChHHHH
Confidence            999998     1       4999999999998765

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9

Probab=99.88  E-value=8.6e-23  Score=156.05  Aligned_cols=92  Identities=15%  Similarity=0.118  Sum_probs=76.2

Q ss_pred             cCCChHHHHHHHHHHhccc-cccccccceEEEEEecCCC---ccEEeeCCCCCcCC--------------CCCccHHHHH
Q 033681            9 SQCDGDYQHNKIMEMLVVK-FLHQTLTDVIIPTFDIRLL---QPISFSTLKAKRNA--------------SKVSWLSDNC   70 (113)
Q Consensus         9 ~~y~~~~l~~~L~~~~g~~-~l~d~~~~v~i~a~di~~~---~~~~f~~~~~~~~~--------------~~~~~l~da~   70 (113)
                      ++|+++.||++|+++||+. +|.|...+.+++++++.++   ++++|+||+.....              ..+.+||||+
T Consensus        74 ~~y~~~~le~~L~~~~g~~~~l~d~~~p~~~v~~~~~~~~~~~~~~f~ny~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~  153 (312)
T cd07212          74 RPYNSEPLEEFLKREFGEDTKMTDVKYPRLMVTGVLADRQPVQLHLFRNYDPPEDVEEPEKNANFLPPTDPAEQLLWRAA  153 (312)
T ss_pred             CCCCChHHHHHHHHHHCcCccccccCCCeEEEEeEeccCCCcCceeeecCCCCCCchhccccccccccCCcccccHHHHH
Confidence            6899999999999999987 8999888877777666544   45999999753321              2368999999


Q ss_pred             hHhccCCCCcCceEEEecCCCCCeeeeEecceeecCCCCCcC
Q 033681           71 IGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        71 ~ASsAaP~yF~p~~~~~~~~~g~~~~~~vDGGl~aNnP~~~~  112 (113)
                      |||||||+||+|+     +       .|||||+.+|||++.|
T Consensus       154 rASsAaP~~F~p~-----~-------~~vDGGv~~NnP~~~a  183 (312)
T cd07212         154 RSSGAAPTYFRPM-----G-------RFLDGGLIANNPTLDA  183 (312)
T ss_pred             Hhhcccccccccc-----c-------ceecCceeccChHHHH
Confidence            9999999999998     2       4999999999998654

PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.

>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2

Probab=99.84  E-value=1.5e-20  Score=133.48  Aligned_cols=92  Identities=20%  Similarity=0.150  Sum_probs=78.6

Q ss_pred             ccCCChHHHHHHHHHHhccccc------------cccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhcc
Q 033681            8 LSQCDGDYQHNKIMEMLVVKFL------------HQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSA   75 (113)
Q Consensus         8 ~~~y~~~~l~~~L~~~~g~~~l------------~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsA   75 (113)
                      ...|+.+.|+++|++.+++..+            .+..+++.|+++|+.++++++|+....     .+..+|||++||||
T Consensus        83 ~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~I~atd~~tg~~~~f~~~~~-----~~~~l~~av~AS~A  157 (194)
T cd07207          83 GGLYKGDALEEWLRELLKEKTGNSFATSLLRDLDDDLGKDLKVVATDLTTGALVVFSAETT-----PDMPVAKAVRASMS  157 (194)
T ss_pred             cCCccHHHHHHHHHHHHHhccCCcccchhhhhhccccCCcEEEEEEECCCCCEEEecCCCC-----CcccHHHHHHHHcC
Confidence            4579999999999999988766            566789999999999999999976532     25679999999999


Q ss_pred             CCCCcCceEEEecCCCCCeeeeEecceeecCCCCCc
Q 033681           76 APYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSF  111 (113)
Q Consensus        76 aP~yF~p~~~~~~~~~g~~~~~~vDGGl~aNnP~~~  111 (113)
                      +|++|||+++..       +..|+|||+.+|||+.+
T Consensus       158 iP~~f~pv~i~~-------g~~~vDGG~~~n~Pv~~  186 (194)
T cd07207         158 IPFVFKPVRLAK-------GDVYVDGGVLDNYPVWL  186 (194)
T ss_pred             CCcccccEEeCC-------CeEEEeCccccCCCchh
Confidence            999999999951       23799999999999864

ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona

>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1

Probab=99.83  E-value=1.8e-20  Score=131.66  Aligned_cols=87  Identities=21%  Similarity=0.201  Sum_probs=78.4

Q ss_pred             ccCCChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEEEe
Q 033681            8 LSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEM   87 (113)
Q Consensus         8 ~~~y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~~~   87 (113)
                      ...|+.+.++++|++.|++.+++++.+++.|+++|+.++++++|++          ..+|||++||||+|+||||++++.
T Consensus        76 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~i~a~~l~~g~~~~f~~----------~~l~~av~AS~a~P~~f~pv~~~g  145 (175)
T cd07205          76 AGLLRGDKFLELLDEYFGDRDIEDLWIPFFIVATDLTSGKLVVFRS----------GSLVRAVRASMSIPGIFPPVKIDG  145 (175)
T ss_pred             ccccChHHHHHHHHHHcCCCcHHHCCCCEEEEEEECCCCCEEEEcC----------CCHHHHHHHHcccccccCCEEECC
Confidence            4569999999999999999999999999999999999999999864          249999999999999999999853


Q ss_pred             cCCCCCeeeeEecceeecCCCCCcC
Q 033681           88 HASTGTKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        88 ~~~~g~~~~~~vDGGl~aNnP~~~~  112 (113)
                              ..|+|||+.+|+|+..|
T Consensus       146 --------~~~~DGG~~~n~P~~~a  162 (175)
T cd07205         146 --------QLLVDGGVLNNLPVDVL  162 (175)
T ss_pred             --------EEEEeccCcCCccHHHH
Confidence                    36999999999998654

Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc

>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17

Probab=99.81  E-value=4.9e-20  Score=136.75  Aligned_cols=94  Identities=28%  Similarity=0.348  Sum_probs=75.1

Q ss_pred             CCChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCc-CCCCCccHHHHHhHhccCCCCcCceEEEec
Q 033681           10 QCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKR-NASKVSWLSDNCIGTSAAPYYMPPYYFEMH   88 (113)
Q Consensus        10 ~y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~-~~~~~~~l~da~~ASsAaP~yF~p~~~~~~   88 (113)
                      +|+.+.+.++.++....     .-.+++||++|+.++++++|++++... .+..+.++|||++||||||+||||+++...
T Consensus        55 ~~~~~~~~~~~~~~~~~-----if~~~~i~a~~~~~~~~~~f~~~~~~~~~~~~~~~l~d~~~ASsAaP~~f~p~~i~~~  129 (258)
T cd07199          55 RYSAEELVELYEELGRK-----IFPRVLVTAYDLSTGKPVVFSNYDAEEPDDDDDFKLWDVARATSAAPTYFPPAVIESG  129 (258)
T ss_pred             CCCHHHHHHHHHHHhHh-----hccCeEEEEEEcCCCCeEEEECCCCcccCCcCCccHHHHHHHHhcchhccCcEEeccC
Confidence            57777777776664322     112899999999999999999997643 445688999999999999999999999542


Q ss_pred             CCCCCeeeeEecceeecCCCCCcC
Q 033681           89 ASTGTKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        89 ~~~g~~~~~~vDGGl~aNnP~~~~  112 (113)
                      .    ....|+|||+.+|||+++|
T Consensus       130 ~----~~~~~vDGGv~~NnP~~~a  149 (258)
T cd07199         130 G----DEGAFVDGGVAANNPALLA  149 (258)
T ss_pred             C----CeeEEecCccccCChHHHH
Confidence            1    3458999999999998765

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6

Probab=99.80  E-value=1.4e-19  Score=127.54  Aligned_cols=87  Identities=20%  Similarity=0.138  Sum_probs=78.1

Q ss_pred             ccCCChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEEEe
Q 033681            8 LSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEM   87 (113)
Q Consensus         8 ~~~y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~~~   87 (113)
                      ...++.+.+++.|++.+++.+++|+.+++.|+++|++++++++|++.          .++|+++||||+|.+|||++++.
T Consensus        76 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~i~at~~~tg~~~~f~~~----------~l~~av~AS~a~P~~f~p~~~~g  145 (175)
T cd07228          76 SGLLKGEKVLEYLREIMGGVTIEELPIPFAAVATDLQTGKEVWFREG----------SLIDAIRASISIPGIFAPVEHNG  145 (175)
T ss_pred             ccccCHHHHHHHHHHHcCCCCHHHCCCCEEEEEEECCCCCEEEECCC----------CHHHHHHHHcccCccccCEEECC
Confidence            45689999999999999999999999999999999999999999742          39999999999999999999843


Q ss_pred             cCCCCCeeeeEecceeecCCCCCcC
Q 033681           88 HASTGTKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        88 ~~~~g~~~~~~vDGGl~aNnP~~~~  112 (113)
                              ..|+|||+.+|.|+..|
T Consensus       146 --------~~~vDGG~~~~~P~~~a  162 (175)
T cd07228         146 --------RLLVDGGVVNPIPVSVA  162 (175)
T ss_pred             --------EEEEeccCcCCCcHHHH
Confidence                    37999999999997543

Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.

>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7

Probab=99.78  E-value=3.4e-19  Score=135.99  Aligned_cols=90  Identities=19%  Similarity=0.130  Sum_probs=79.3

Q ss_pred             CccCCChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEEE
Q 033681            7 ILSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFE   86 (113)
Q Consensus         7 ~~~~y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~~   86 (113)
                      ..+.|+++.+++.|+++|++.+++|+.+++.++++|+.++++++|+..          .+++|+|||||+|++|||+.+.
T Consensus        94 ~~~~~~~~~~~~~l~~~~~~~~~edl~~p~~~vatdl~tg~~~~~~~g----------~l~~avrAS~siP~~f~Pv~~~  163 (306)
T cd07225          94 ITSMFSGAAFNRSIHSIFGDKQIEDLWLPYFTITTDITASAMRVHTDG----------SLWRYVRASMSLSGYLPPLCDP  163 (306)
T ss_pred             ccccCChHHHHHHHHHHhCCCCHHHcCCCeEEEeeecCCCCEEEecCC----------CHHHHHHHHhcCCeeccceEeC
Confidence            456799999999999999999999999999999999999999998643          5999999999999999999642


Q ss_pred             ecCCCCCeeeeEecceeecCCCCCcC
Q 033681           87 MHASTGTKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        87 ~~~~~g~~~~~~vDGGl~aNnP~~~~  112 (113)
                      .      ....|||||+.+|+|+..|
T Consensus       164 ~------~g~~~vDGGv~~n~Pv~~a  183 (306)
T cd07225         164 K------DGHLLMDGGYINNLPADVA  183 (306)
T ss_pred             C------CCeEEEeccccCcchHHHH
Confidence            1      2347999999999998754

Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE

>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes

Probab=99.77  E-value=1.1e-18  Score=127.80  Aligned_cols=86  Identities=19%  Similarity=0.171  Sum_probs=78.2

Q ss_pred             ccCCChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEEEe
Q 033681            8 LSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEM   87 (113)
Q Consensus         8 ~~~y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~~~   87 (113)
                      ...|+.+.+++.|++.+++.++.++..++.|+++|+.++++++|++.          .++++++||||+|++|+|+++++
T Consensus        76 ~g~~~~~~l~~~l~~~l~~~~~~~~~~~l~i~atdl~tg~~~~f~~~----------~l~~av~AS~aiP~~f~Pv~i~g  145 (221)
T cd07210          76 GGLLSGDRFAALLREHLPPDRFEELRIPLAVSVVDLTSRETLLLSEG----------DLAEAVAASCAVPPLFQPVEIGG  145 (221)
T ss_pred             ccccChHHHHHHHHHHcCCCCHHHCCCCeEEEEEECCCCCEEEECCC----------CHHHHHHHHcccccccCCEEECC
Confidence            46789999999999999999999999999999999999999999753          38999999999999999999843


Q ss_pred             cCCCCCeeeeEecceeecCCCCCc
Q 033681           88 HASTGTKKFNLVDGVVAANIPVSF  111 (113)
Q Consensus        88 ~~~~g~~~~~~vDGGl~aNnP~~~  111 (113)
                              ..|+|||+.+|+|+..
T Consensus       146 --------~~~vDGGv~~n~Pi~~  161 (221)
T cd07210         146 --------RPFVDGGVADRLPFDA  161 (221)
T ss_pred             --------EEEEeccccccccHHH
Confidence                    3799999999999754

Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.

>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]

Probab=99.74  E-value=1e-18  Score=139.69  Aligned_cols=101  Identities=20%  Similarity=0.213  Sum_probs=79.3

Q ss_pred             CCccccCccCCChHHHHHHHHHHhccc-cccccc-----cceEEEEEec---CCCccEEeeCCCCCcC------CCCCcc
Q 033681            1 MGRKRSILSQCDGDYQHNKIMEMLVVK-FLHQTL-----TDVIIPTFDI---RLLQPISFSTLKAKRN------ASKVSW   65 (113)
Q Consensus         1 ~~~~~~~~~~y~~~~l~~~L~~~~g~~-~l~d~~-----~~v~i~a~di---~~~~~~~f~~~~~~~~------~~~~~~   65 (113)
                      |+|.+   ++|+.+.+|++|++.+|.. .|-.+.     -+|.|.++=+   -+.||++|+||.+...      ...++.
T Consensus       500 ~sw~H---s~y~~n~we~iLKem~ged~~mi~tsr~~~~PkvavVStiVn~~pT~qpfIFRNY~hp~G~~Shy~Ggc~h~  576 (763)
T KOG4231|consen  500 ASWIH---SKYSANEWERILKEMCGEDGDMIITSRVKNVPKVAVVSTIVNVMPTAQPFIFRNYQHPVGTQSHYMGGCKHQ  576 (763)
T ss_pred             heehh---hhcchHHHHHHHHHHhhhhhhHHHhhccCCCCceeehhhhhhcCCCccceeeeccCCCCCcchhhcccchHH
Confidence            45655   7999999999999999943 354443     2466666533   3579999999976432      245789


Q ss_pred             HHHHHhHhccCCCCcCceEEEecCCCCCeeeeEecceeecCCCCCcC
Q 033681           66 LSDNCIGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        66 l~da~~ASsAaP~yF~p~~~~~~~~~g~~~~~~vDGGl~aNnP~~~~  112 (113)
                      +|+|+|||||||.||..+.+++        +.++|||+.+|||+.+|
T Consensus       577 ~WqAIrASsAAP~Yf~e~~lgn--------~l~QDGgi~aNNPta~A  615 (763)
T KOG4231|consen  577 VWQAIRASSAAPYYFDEFSLGN--------YLWQDGGIVANNPTAFA  615 (763)
T ss_pred             HHHHHHhcccCCcchhhhcccc--------ceeccCcEeecCccHHH
Confidence            9999999999999999998854        47999999999999876

>PRK10279 hypothetical protein; Provisional

Probab=99.64  E-value=4.6e-16  Score=118.60  Aligned_cols=86  Identities=19%  Similarity=0.190  Sum_probs=77.4

Q ss_pred             cCCChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEEEec
Q 033681            9 SQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMH   88 (113)
Q Consensus         9 ~~y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~~~~   88 (113)
                      .-++++.+++.|++.++..++.|+..++.|+++|+.++++++|+..          .+++|+|||+|+|++|+|++++. 
T Consensus        82 gl~~~~~~~~~l~~~~~~~~~e~l~~~~~ivAtdl~tg~~v~~~~g----------~l~~avrAS~aiP~vf~Pv~~~g-  150 (300)
T PRK10279         82 GLLRGERVFNQYREIMPETEIENCSRRFGAVATNLSTGRELWFTEG----------DLHLAIRASCSMPGLMAPVAHNG-  150 (300)
T ss_pred             cccCcHHHHHHHHHHcChhhHHhCCCCEEEEEEECCCCCEEEecCC----------CHHHHHHHhcccccCCCCEEECC-
Confidence            5689999999999999999999999999999999999999999743          38899999999999999999843 


Q ss_pred             CCCCCeeeeEecceeecCCCCCcC
Q 033681           89 ASTGTKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        89 ~~~g~~~~~~vDGGl~aNnP~~~~  112 (113)
                             ..|||||+.+|-|+..|
T Consensus       151 -------~~~vDGGv~~~~Pv~~a  167 (300)
T PRK10279        151 -------YWLVDGAVVNPVPVSLT  167 (300)
T ss_pred             -------EEEEECccCccccHHHH
Confidence                   47999999999997643

>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli

Probab=99.63  E-value=1.9e-16  Score=117.93  Aligned_cols=89  Identities=19%  Similarity=0.237  Sum_probs=74.1

Q ss_pred             cCCChHHHHHHH---HHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEE
Q 033681            9 SQCDGDYQHNKI---MEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYF   85 (113)
Q Consensus         9 ~~y~~~~l~~~L---~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~   85 (113)
                      ..++.+.+.+.+   .+.|+..++.++.+++.|+++|+.++++++|++...      +..++++++||||+|++|||+++
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~~g~~~~~~~~~~------~~~l~~av~AS~aiP~~f~pv~i  149 (266)
T cd07208          76 NLFDLDFLYDELPDGLDPFDFEAFAASPARFYVVATDADTGEAVYFDKPDI------LDDLLDALRASSALPGLFPPVRI  149 (266)
T ss_pred             CeecHHHHHhhccCccCCcCHHHHHhCCCcEEEEEEECCCCCEEEEeCcCc------chHHHHHHHHHhcchhhcCCEEE
Confidence            346777777765   455666778888899999999999999999998754      35699999999999999999988


Q ss_pred             EecCCCCCeeeeEecceeecCCCCCc
Q 033681           86 EMHASTGTKKFNLVDGVVAANIPVSF  111 (113)
Q Consensus        86 ~~~~~~g~~~~~~vDGGl~aNnP~~~  111 (113)
                      +.        ..|+|||+.+|+|+..
T Consensus       150 ~g--------~~yvDGGv~~~~P~~~  167 (266)
T cd07208         150 DG--------EPYVDGGLSDSIPVDK  167 (266)
T ss_pred             CC--------EEEEcCccCcchhHHH
Confidence            43        3699999999999764

Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.

>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli

Probab=99.62  E-value=6.4e-16  Score=112.40  Aligned_cols=81  Identities=20%  Similarity=0.297  Sum_probs=70.5

Q ss_pred             HHHHHHHHhcccccccccc---ceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEEEecCCCC
Q 033681           16 QHNKIMEMLVVKFLHQTLT---DVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHASTG   92 (113)
Q Consensus        16 l~~~L~~~~g~~~l~d~~~---~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~~~~~~~g   92 (113)
                      +++++++.+...++.+...   ++.|+++|+.++++++|++...       ..++|+++||+|+|.+|||++++.     
T Consensus        68 l~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~tg~~~~f~~~~~-------~~~~~av~AS~aiP~~f~pv~i~g-----  135 (215)
T cd07209          68 LRGLLDRALDFDTLRLLAILFAGLVIVAVNVLTGEPVYFDDIPD-------GILPEHLLASAALPPFFPPVEIDG-----  135 (215)
T ss_pred             HHHHHHHhCCHHHHhhccccCceEEEEEEEcCCCCEEEEeCCCc-------chHHHHHHHhccccccCCCEEECC-----
Confidence            7888888888888888775   4999999999999999997752       469999999999999999999843     


Q ss_pred             CeeeeEecceeecCCCCCc
Q 033681           93 TKKFNLVDGVVAANIPVSF  111 (113)
Q Consensus        93 ~~~~~~vDGGl~aNnP~~~  111 (113)
                         ..|+|||+.+|+|+..
T Consensus       136 ---~~yvDGGv~~n~Pv~~  151 (215)
T cd07209         136 ---RYYWDGGVVDNTPLSP  151 (215)
T ss_pred             ---eEEEcCccccCcCHHH
Confidence               3799999999999754

Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.

>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6

Probab=99.62  E-value=6.5e-16  Score=116.24  Aligned_cols=83  Identities=16%  Similarity=0.072  Sum_probs=73.6

Q ss_pred             CChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEEEecCC
Q 033681           11 CDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHAS   90 (113)
Q Consensus        11 y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~~~~~~   90 (113)
                      .+++.+.+.|.+.|++..++|+..++.++++|+.++++++|++.          .+|+++|||+|+|++|||+.++.   
T Consensus        93 ~~g~~~~~~l~~~~~~~~iedl~~pf~~~aTdl~tg~~~~~~~g----------~l~~avrAS~slPg~~pPv~~~G---  159 (269)
T cd07227          93 TTGHEFNRGIWKTFGNTHIEDFWIPFYANSTNITHSRMEIHSSG----------YAWRYIRASMSLAGLLPPLSDNG---  159 (269)
T ss_pred             cchhHHHHHHHHHcCcCCHHHCCCCEEEEEEECCCCCEEEecCC----------CHHHHHHHHccchhcCCCEEECC---
Confidence            45677788899999999999999999999999999999998743          39999999999999999999843   


Q ss_pred             CCCeeeeEecceeecCCCCCc
Q 033681           91 TGTKKFNLVDGVVAANIPVSF  111 (113)
Q Consensus        91 ~g~~~~~~vDGGl~aNnP~~~  111 (113)
                           ..|+|||+.+|.|+..
T Consensus       160 -----~~~vDGGv~dnlPv~~  175 (269)
T cd07227         160 -----SMLLDGGYMDNLPVSP  175 (269)
T ss_pred             -----EEEEcccCCccHhHHH
Confidence                 4799999999999754

These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.

>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4

Probab=99.55  E-value=3e-14  Score=105.76  Aligned_cols=90  Identities=13%  Similarity=0.163  Sum_probs=72.4

Q ss_pred             ccCCC-hHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCC--cCceE
Q 033681            8 LSQCD-GDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYY--MPPYY   84 (113)
Q Consensus         8 ~~~y~-~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~y--F~p~~   84 (113)
                      .+.|. .+.|++.|++++++........++.|+++|+.+++.++|+.+...      ..|.||++||||+|+|  |+|++
T Consensus        78 ~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~aTdl~tg~~v~~~~f~s~------~~L~~av~AS~aiP~~~g~~pv~  151 (246)
T cd07222          78 TPGYDFMARLRKGIESILPTDAHELANDRLHVSITNLKTRKNYLVSNFTSR------EDLIKVLLASCYVPVYAGLKPVE  151 (246)
T ss_pred             CCcchHHHHHHHHHHHHCCHHHHhcCCCcEEEEEEECCCCCeEEEeccCCc------chHHHHHHHhhcCccccCCCCeE
Confidence            34444 667899999999874433334899999999999999999987542      2499999999999998  69998


Q ss_pred             EEecCCCCCeeeeEecceeecCCCCCc
Q 033681           85 FEMHASTGTKKFNLVDGVVAANIPVSF  111 (113)
Q Consensus        85 ~~~~~~~g~~~~~~vDGGl~aNnP~~~  111 (113)
                      +.+        ..|||||+.+|.|+..
T Consensus       152 ~~G--------~~~vDGGv~~~~P~~~  170 (246)
T cd07222         152 YKG--------QKWIDGGFTNSLPVLP  170 (246)
T ss_pred             ECC--------EEEEecCccCCCCCCC
Confidence            843        3799999999999863

PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.

>cd07198 Patatin Patatin-like phospholipase

Probab=99.55  E-value=2.2e-14  Score=100.72  Aligned_cols=85  Identities=16%  Similarity=0.144  Sum_probs=66.1

Q ss_pred             hHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEEEecCCCC
Q 033681           13 GDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHASTG   92 (113)
Q Consensus        13 ~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~~~~~~~g   92 (113)
                      +..++..+++ +....+.+...++.|.++|+.++++++|+. ..      +..+++|++||||+|++|+|+++...    
T Consensus        79 ~~~~~~~~~~-~~~~~~~~~~~~~~i~at~l~tg~~~~~~~-~~------~~~l~~av~AS~aiP~~f~p~~~~~~----  146 (172)
T cd07198          79 GILRQPLLSA-LPDDAHEDASGKLFISLTRLTDGENVLVSD-TS------KGELWSAVRASSSIPGYFGPVPLSFR----  146 (172)
T ss_pred             HHHHHHHHHh-ccHhHHHHCCCCEEEEEEECCCCCEEEEeC-CC------cchHHHHHHHHcchhhhcCceeecCC----
Confidence            3334444443 345667788899999999999999999976 22      45799999999999999999998211    


Q ss_pred             CeeeeEecceeecCCCCCc
Q 033681           93 TKKFNLVDGVVAANIPVSF  111 (113)
Q Consensus        93 ~~~~~~vDGGl~aNnP~~~  111 (113)
                        ...|+|||+.+|+|+..
T Consensus       147 --g~~~vDGGv~~n~Pv~~  163 (172)
T cd07198         147 --GRRYGDGGLSNNLPVAE  163 (172)
T ss_pred             --CeEEEeCCcccCCCCcc
Confidence              23699999999999863

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.

>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2

Probab=99.53  E-value=5e-14  Score=104.70  Aligned_cols=89  Identities=12%  Similarity=0.131  Sum_probs=75.2

Q ss_pred             ccCCC-hHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCC--cCceE
Q 033681            8 LSQCD-GDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYY--MPPYY   84 (113)
Q Consensus         8 ~~~y~-~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~y--F~p~~   84 (113)
                      .|.|+ .+.+++.|++++.+....+...++.|+++++.+++.++|+.++.      +..|+||++|||++|+|  |.|..
T Consensus        76 ~p~~~l~~~l~~~l~~~lp~d~~~~~~~~L~i~~T~l~~g~~~~~s~f~s------~~dLi~al~AS~~IP~~~g~~P~~  149 (245)
T cd07218          76 SPSFNIQTCLLEGLQKFLPDDAHERVSGRLHISLTRVSDGKNVIVSEFES------REELLQALLCSCFIPVFSGLLPPK  149 (245)
T ss_pred             ccccCHHHHHHHHHHHHCCcchHHhCCCCEEEEEEECCCCCeEEEecCCC------cchHHHHHHHhcCCCcccCCCCeE
Confidence            46666 77899999999998888888899999999999999999998754      23599999999999999  45666


Q ss_pred             EEecCCCCCeeeeEecceeecCCCCC
Q 033681           85 FEMHASTGTKKFNLVDGVVAANIPVS  110 (113)
Q Consensus        85 ~~~~~~~g~~~~~~vDGGl~aNnP~~  110 (113)
                      +.        ...|||||+.+|.|+.
T Consensus       150 ~~--------G~~~vDGGv~dnlP~~  167 (245)
T cd07218         150 FR--------GVRYMDGGFSDNLPTL  167 (245)
T ss_pred             EC--------CEEEEcCcccCCCCCC
Confidence            63        2379999999999973

Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.

>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family

Probab=99.51  E-value=9.6e-14  Score=102.89  Aligned_cols=89  Identities=15%  Similarity=0.175  Sum_probs=73.1

Q ss_pred             cCCC-hHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCC--cCceEE
Q 033681            9 SQCD-GDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYY--MPPYYF   85 (113)
Q Consensus         9 ~~y~-~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~y--F~p~~~   85 (113)
                      +.|+ .+.+++.|++.+++....+...++.|.++|+.++++++|+.+..+      ..|.||++||||+|+|  |.|.++
T Consensus        78 ~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~~g~~~~~~~f~s~------~~Li~Al~AS~~iP~~~g~~P~~~  151 (243)
T cd07204          78 PSFNLLKILRQGLEKILPDDAHELASGRLHISLTRVSDGENVLVSEFDSK------EELIQALVCSCFIPFYCGLIPPKF  151 (243)
T ss_pred             ccchHHHHHHHHHHHHCChhHHHhcCCCEEEEEEECCCCCEEEEecCCCc------hHHHHHHHHhccCCcccCCCCeEE
Confidence            3443 356788899999887777788999999999999999999987542      2488999999999999  578888


Q ss_pred             EecCCCCCeeeeEecceeecCCCCCc
Q 033681           86 EMHASTGTKKFNLVDGVVAANIPVSF  111 (113)
Q Consensus        86 ~~~~~~g~~~~~~vDGGl~aNnP~~~  111 (113)
                      .+        ..|||||+.+|.|...
T Consensus       152 ~G--------~~~vDGGv~~~lP~~~  169 (243)
T cd07204         152 RG--------VRYIDGGLSDNLPILD  169 (243)
T ss_pred             CC--------EEEEeCCcccCCCCCC
Confidence            43        3799999999999763

Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.

>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]

Probab=99.48  E-value=1.1e-13  Score=105.32  Aligned_cols=85  Identities=24%  Similarity=0.250  Sum_probs=77.1

Q ss_pred             cCCChHHHHHHHHHHhccc--cccccccc-eEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEE
Q 033681            9 SQCDGDYQHNKIMEMLVVK--FLHQTLTD-VIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYF   85 (113)
Q Consensus         9 ~~y~~~~l~~~L~~~~g~~--~l~d~~~~-v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~   85 (113)
                      .-++++.+++.+++++|+.  .++++.++ +.|+++|+.+++.++|..-          .+|+|++||+|.|++|||+.+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~atd~~~g~~~~~~~g----------~~~~av~AS~siP~vF~Pv~i  166 (306)
T COG1752          97 GLLRGEKLRNLLRELLGDLLFDFEDLPIPLLYVVATDLLTGREVVFSEG----------SLAEAVRASCSIPGVFPPVEI  166 (306)
T ss_pred             ceecHHHHHHHHHHHhcccccCHHHcCCCcEEEEeeEcCCCCEEEecCC----------cHHHHHHHhcccCccCCCEEE
Confidence            5688999999999999999  99999999 9999999999999998844          299999999999999999998


Q ss_pred             EecCCCCCeeeeEecceeecCCCCCc
Q 033681           86 EMHASTGTKKFNLVDGVVAANIPVSF  111 (113)
Q Consensus        86 ~~~~~~g~~~~~~vDGGl~aNnP~~~  111 (113)
                      ..        ..|+|||+.+|-|+..
T Consensus       167 ~~--------~~~vDGg~~~n~Pv~~  184 (306)
T COG1752         167 DG--------RLLVDGGVLNNVPVSL  184 (306)
T ss_pred             CC--------EEEEecCccCCccHHH
Confidence            54        4799999999999754

>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2

Probab=99.47  E-value=1.4e-13  Score=94.67  Aligned_cols=97  Identities=18%  Similarity=0.141  Sum_probs=58.9

Q ss_pred             ccCCChHHHHHHHHHHhccccccccccceEEE-------EE---ecCC-------CccEEeeCCCCCcCCCCCccHHHHH
Q 033681            8 LSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIP-------TF---DIRL-------LQPISFSTLKAKRNASKVSWLSDNC   70 (113)
Q Consensus         8 ~~~y~~~~l~~~L~~~~g~~~l~d~~~~v~i~-------a~---di~~-------~~~~~f~~~~~~~~~~~~~~l~da~   70 (113)
                      ...|+.+.+++.|++.+++....+........       ..   ....       .................+..+++++
T Consensus        90 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~  169 (204)
T PF01734_consen   90 SGLFDSEPLRDWLRRVLGDLTLEEFSARLPRAIGAADDFTTRSRSIFQSPSSPFRASSNNFNESRSRYDFDPDVPLWDAV  169 (204)
T ss_dssp             S-SS--HHHHHHHHHHHCCHCHHHHCTCECCC-EE--------------EEECCCCECCEEECCCCCTTCCCTSBHHHHH
T ss_pred             ccchhHHHHHHHHHHhccccCHHHhhhccccccccccccccccccccccccccccccccccccccccccCCCcchHHHhh
Confidence            45689999999999999987776654322111       00   0000       0111111111112234578999999


Q ss_pred             hHhccCCCCcCceEEEecCCCCCeeeeEecceeecCCCCCcC
Q 033681           71 IGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        71 ~ASsAaP~yF~p~~~~~~~~~g~~~~~~vDGGl~aNnP~~~~  112 (113)
                      +||+|+|++|+|+++++.        .|+|||+..|+|+..|
T Consensus       170 ~AS~a~P~~~~p~~~~g~--------~~~DGG~~~n~P~~~a  203 (204)
T PF01734_consen  170 RASSAIPGIFPPVKIDGE--------YYIDGGILDNNPIEAA  203 (204)
T ss_dssp             HHCCHSTTTSTTEEETS---------EEEEGGGCS---GGGC
T ss_pred             ChhccccccCCCEEECCE--------EEEecceeeccccccC
Confidence            999999999999999432        7999999999999876

This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.

>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3

Probab=99.44  E-value=4.5e-13  Score=100.01  Aligned_cols=87  Identities=16%  Similarity=0.175  Sum_probs=69.4

Q ss_pred             ChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCC--cCceEEEecC
Q 033681           12 DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYY--MPPYYFEMHA   89 (113)
Q Consensus        12 ~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~y--F~p~~~~~~~   89 (113)
                      ..+.+++.|+++++.........++.|+++|+.+++.++|+.++.+      ..++||++||||+|.|  |.|..+.+  
T Consensus        83 ~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~tg~~v~~~~f~s~------~~l~~av~AS~siP~~~g~~P~~~~G--  154 (252)
T cd07221          83 LSKHLRDGLQRHLPDNVHQLISGKMCISLTRVSDGENVLVSDFHSK------DEVVDALVCSCFIPFFSGLIPPSFRG--  154 (252)
T ss_pred             HHHHHHHHHHHHCCcCHHHhcCCCEEEEEEECCCCCEEEEecCCCc------hHHHHHHHHHccCccccCCCCeEECC--
Confidence            3467888899988865444445789999999999999999987542      3589999999999999  55766632  


Q ss_pred             CCCCeeeeEecceeecCCCCCcC
Q 033681           90 STGTKKFNLVDGVVAANIPVSFS  112 (113)
Q Consensus        90 ~~g~~~~~~vDGGl~aNnP~~~~  112 (113)
                            ..|||||+.+|.|..-+
T Consensus       155 ------~~yvDGGv~dnlPv~~~  171 (252)
T cd07221         155 ------VRYVDGGVSDNVPFFDA  171 (252)
T ss_pred             ------EEEEeCCcccCCCccCC
Confidence                  36999999999998643

PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.

>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1

Probab=99.42  E-value=5.8e-13  Score=104.15  Aligned_cols=84  Identities=13%  Similarity=0.150  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCc--CceEEEecCCC
Q 033681           14 DYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYM--PPYYFEMHAST   91 (113)
Q Consensus        14 ~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF--~p~~~~~~~~~   91 (113)
                      +.++++|++.+.+..+.+...++.|+++|+.+++.++|+.++.      +..|.||++|||++|.|+  .|.++.     
T Consensus        97 ~~lr~~L~~~LP~da~e~~~g~L~IsaTdl~tGknv~fS~F~S------~~dLidAV~AScaIP~y~G~~Pp~ir-----  165 (382)
T cd07219          97 QMMRQFLYRVLPEDSYKVATGKLHVSLTRVTDGENVVVSEFTS------KEELIEALYCSCFVPVYCGLIPPTYR-----  165 (382)
T ss_pred             HHHHHHHHhhCcHhhHHhCCCcEEEEEEECCCCCEEEEeccCC------cchHHHHHHHHccCccccCCcCeEEC-----
Confidence            5678888898888888888899999999999999999998754      345999999999999985  355663     


Q ss_pred             CCeeeeEecceeecCCCCCc
Q 033681           92 GTKKFNLVDGVVAANIPVSF  111 (113)
Q Consensus        92 g~~~~~~vDGGl~aNnP~~~  111 (113)
                         ...|||||+.+|.|+..
T Consensus       166 ---G~~yVDGGvsdnlPv~~  182 (382)
T cd07219         166 ---GVRYIDGGFTGMQPCSF  182 (382)
T ss_pred             ---CEEEEcCCccCCcCccC
Confidence               23699999999999753

Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.

>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2

Probab=99.36  E-value=3.4e-12  Score=95.15  Aligned_cols=84  Identities=15%  Similarity=0.144  Sum_probs=67.8

Q ss_pred             HHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCc--CceEEEecCCC
Q 033681           14 DYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYM--PPYYFEMHAST   91 (113)
Q Consensus        14 ~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF--~p~~~~~~~~~   91 (113)
                      +.+++.|++.+.+........++.|.++|+.+++.++|+.+...      ..|.||++|||++|.|+  .|..+.     
T Consensus        89 ~~l~~~l~~~lp~~a~~~~~~~l~is~T~~~tg~~~~~s~f~s~------~dLi~al~AScsiP~~~g~~P~~~~-----  157 (249)
T cd07220          89 KILRDGLLRTLPENAHELASGRLGISLTRVSDGENVLVSDFNSK------EELIQALVCSCFIPVYCGLIPPTLR-----  157 (249)
T ss_pred             HHHHHHHHHHCChhhHHHCCCcEEEEEEECCCCCEEEEecCCCc------chHHHHHHHhccCccccCCCCeeEC-----
Confidence            45777777778777777788999999999999999999987642      24899999999999775  344453     


Q ss_pred             CCeeeeEecceeecCCCCCc
Q 033681           92 GTKKFNLVDGVVAANIPVSF  111 (113)
Q Consensus        92 g~~~~~~vDGGl~aNnP~~~  111 (113)
                         ...|||||+.+|.|+..
T Consensus       158 ---G~~yvDGGvsdnlPv~~  174 (249)
T cd07220         158 ---GVRYVDGGISDNLPQYE  174 (249)
T ss_pred             ---CEEEEcCCcccCCCCCC
Confidence               23799999999999654

PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.

>cd07232 Pat_PLPL Patain-like phospholipase

Probab=99.34  E-value=3.3e-12  Score=101.03  Aligned_cols=98  Identities=13%  Similarity=0.101  Sum_probs=78.0

Q ss_pred             cCCChHHHHHH-HHHHhccccccccc----cceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCce
Q 033681            9 SQCDGDYQHNK-IMEMLVVKFLHQTL----TDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPY   83 (113)
Q Consensus         9 ~~y~~~~l~~~-L~~~~g~~~l~d~~----~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~   83 (113)
                      ..+|.+.+++. ++..+|+.++.|..    +.+-|+.++.+++++.+|.||....    ++.+|+|++||||+|++|+|+
T Consensus       151 ~~~d~~~l~~~~~~~~~gd~TFeEa~~~tgr~l~I~vt~~d~~~~~~lln~~tsp----~v~I~sAV~AS~svPgvf~pv  226 (407)
T cd07232         151 ARFDSVEWARTCCWFTRGSMTFEEAYERTGRILNISVVPADPHSPTILLNYLTSP----NCTIWSAVLASAAVPGILNPV  226 (407)
T ss_pred             CCCCHHHHHHHHHHHhcCCCCHHHHHHhcCCEEEEEEEECCCCCceEEeccCCCC----ccHHHHHHhcccCccccccCe
Confidence            47899999999 88999999988764    3466777777788888887775322    678999999999999999999


Q ss_pred             EEEecCCCCC------eeeeEecceeecCCCCC
Q 033681           84 YFEMHASTGT------KKFNLVDGVVAANIPVS  110 (113)
Q Consensus        84 ~~~~~~~~g~------~~~~~vDGGl~aNnP~~  110 (113)
                      ++...+.+|.      ....++|||+..|.|..
T Consensus       227 ~l~~k~~~g~~~~~~~~g~~~~DGgv~~diP~~  259 (407)
T cd07232         227 VLMMKDPDGTLIPPFSFGSKWKDGSLRTDIPLK  259 (407)
T ss_pred             EEEeecCCCCcccccCCCCceecCCcCcccHHH
Confidence            9966655552      24579999999999964

Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.

>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5

Probab=99.30  E-value=5.7e-12  Score=100.05  Aligned_cols=98  Identities=14%  Similarity=0.139  Sum_probs=72.8

Q ss_pred             ccCCChHHHHHHHHHHhcccccccc----ccceEEEEEecCCCc-cEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCc
Q 033681            8 LSQCDGDYQHNKIMEMLVVKFLHQT----LTDVIIPTFDIRLLQ-PISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPP   82 (113)
Q Consensus         8 ~~~y~~~~l~~~L~~~~g~~~l~d~----~~~v~i~a~di~~~~-~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p   82 (113)
                      +..||.+.+++.+++.+|+.++.|.    .+.+.|+.++...++ |.++.-...     .++.+|+|++||||+|++|+|
T Consensus       161 g~~~d~~~l~~~l~~~lgd~tF~Eay~rt~r~L~I~vt~~~~~~~p~llny~t~-----p~v~I~~AV~AS~AlP~vf~p  235 (421)
T cd07230         161 GSWFDISHLTRVMRGFLGDLTFQEAYNRTRRILNITVSPASIYELPRLLNYITA-----PNVLIWSAVCASCSVPGVFPS  235 (421)
T ss_pred             CCCcCHHHHHHHHHHHhCCCCHHHHHHhhCCeEEEEEEeccccCCCeeeeeccC-----CCcHHHHHHHHhcCchhhcCC
Confidence            3579999999999999999998875    344666666655554 555443322     256799999999999999999


Q ss_pred             eEEEecCC-CCC------eeeeEecceeecCCCCC
Q 033681           83 YYFEMHAS-TGT------KKFNLVDGVVAANIPVS  110 (113)
Q Consensus        83 ~~~~~~~~-~g~------~~~~~vDGGl~aNnP~~  110 (113)
                      +++..+++ +|.      ....++|||+..|.|..
T Consensus       236 v~l~~Kd~~~g~i~p~~~~g~~~vDGgv~~~iPi~  270 (421)
T cd07230         236 SPLYEKDPKTGEIVPWNPSSVKWIDGSVDNDLPMT  270 (421)
T ss_pred             eEEEeecCCCCceecccCCCCceeCCCccccChHH
Confidence            99954442 220      13579999999999964

TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.

>cd07224 Pat_like Patatin-like phospholipase

Probab=99.25  E-value=2.8e-11  Score=89.18  Aligned_cols=84  Identities=20%  Similarity=0.237  Sum_probs=66.5

Q ss_pred             hHHHHHHHHHHhccccccccc-cceEEEEEecCCC-ccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCc---eEEEe
Q 033681           13 GDYQHNKIMEMLVVKFLHQTL-TDVIIPTFDIRLL-QPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPP---YYFEM   87 (113)
Q Consensus        13 ~~~l~~~L~~~~g~~~l~d~~-~~v~i~a~di~~~-~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p---~~~~~   87 (113)
                      +..+++.|+++++.....+.. .++.|.++++.++ +...++.+...      ..+.||++|||++|+||+|   +++. 
T Consensus        76 ~~~l~~~l~~~lp~d~~e~~~~~~l~i~~T~~~~~~~~~~v~~f~~~------~~l~~al~AS~~iP~~~~p~~~v~~~-  148 (233)
T cd07224          76 GGVLRDELDKTLPDDAHERCNRGRIRVAVTQLFPVPRGLLVSSFDSK------SDLIDALLASCNIPGYLAPWPATMFR-  148 (233)
T ss_pred             HHHHHHHHHHHcCcHHHHHhcCCCEEEEEEecccCCCceEEEecCCc------chHHHHHHHhccCCcccCCCCCeeEC-
Confidence            467888899999887777777 7999999999876 46666655432      2389999999999999995   5663 


Q ss_pred             cCCCCCeeeeEecceeecCCCCC
Q 033681           88 HASTGTKKFNLVDGVVAANIPVS  110 (113)
Q Consensus        88 ~~~~g~~~~~~vDGGl~aNnP~~  110 (113)
                             ...+||||+.+|.|..
T Consensus       149 -------G~~~vDGG~~~~~P~~  164 (233)
T cd07224         149 -------GKLCVDGGFALFIPPT  164 (233)
T ss_pred             -------CEEEEeCCcccCCCCC
Confidence                   3479999999999975

Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.

>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5

Probab=99.19  E-value=6.8e-11  Score=92.80  Aligned_cols=92  Identities=15%  Similarity=0.119  Sum_probs=79.6

Q ss_pred             cccCccCCC-hHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCC--c
Q 033681            4 KRSILSQCD-GDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYY--M   80 (113)
Q Consensus         4 ~~~~~~~y~-~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~y--F   80 (113)
                      .+.+.|.|+ .+.+++.|++++.+........++.|..+++.+++-++.+++..+      -.|.||++|||.+|.|  |
T Consensus        83 lG~~~p~f~l~~~lr~~L~~~LP~daHe~~sgrL~ISlT~l~~gknvlvS~F~Sr------edLIqALlASc~IP~y~g~  156 (405)
T cd07223          83 LGIFHPAYAPIEHIRQQLQESLPPNIHILASQRLGISMTRWPDGRNFIVTDFATR------DELIQALICTLYFPFYCGI  156 (405)
T ss_pred             cCCCCccccHHHHHHHHHHHhCCchhhHHhCCceEEEEEEccCCceEEecCCCCH------HHHHHHHHHhccCccccCC
Confidence            366777775 678999999999998888888999999999999999998888653      3499999999999999  8


Q ss_pred             CceEEEecCCCCCeeeeEecceeecCCCC
Q 033681           81 PPYYFEMHASTGTKKFNLVDGVVAANIPV  109 (113)
Q Consensus        81 ~p~~~~~~~~~g~~~~~~vDGGl~aNnP~  109 (113)
                      .|..+.+        ..|||||+.+|-|.
T Consensus       157 ~P~~~rG--------~~yVDGGvsnNLP~  177 (405)
T cd07223         157 IPPEFRG--------ERYIDGALSNNLPF  177 (405)
T ss_pred             CCceECC--------EEEEcCcccccCCC
Confidence            8888843        36999999999995

PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.

>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]

Probab=99.17  E-value=1.9e-11  Score=98.68  Aligned_cols=106  Identities=34%  Similarity=0.417  Sum_probs=92.1

Q ss_pred             CccCCCh------HHHHHHHHHHhccccccccccc----eEEEEEecCCCccEEeeCCCCCcC---CCCCccHHHHHhHh
Q 033681            7 ILSQCDG------DYQHNKIMEMLVVKFLHQTLTD----VIIPTFDIRLLQPISFSTLKAKRN---ASKVSWLSDNCIGT   73 (113)
Q Consensus         7 ~~~~y~~------~~l~~~L~~~~g~~~l~d~~~~----v~i~a~di~~~~~~~f~~~~~~~~---~~~~~~l~da~~AS   73 (113)
                      .+++|+.      +......++.+|+++|+++.++    ++|+++|++..+|.+|..+.....   +..+..++++|++|
T Consensus       145 s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~~~~i~~ldl~~~~P~lf~~~~~~~~~~v~~~~~~~~~~c~~t  224 (503)
T KOG0513|consen  145 SGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENLLVVIPCLDLKSLTPNLFSIYDALGTKIVPLLDFKAIDICIDT  224 (503)
T ss_pred             cCccccceeecccccccchhhhhcCCceeeeeccCCCcceEEEeeccCcCCceeeeeeccccccchhhhhhhhhhhhhcc
Confidence            4566777      7788888888999999999998    999999999999999999877666   66788999999999


Q ss_pred             --ccCCCCcCc-eEEEecCCCC-CeeeeEecce-eecCCCCCcC
Q 033681           74 --SAAPYYMPP-YYFEMHASTG-TKKFNLVDGV-VAANIPVSFS  112 (113)
Q Consensus        74 --sAaP~yF~p-~~~~~~~~~g-~~~~~~vDGG-l~aNnP~~~~  112 (113)
                        +|+|++|+| +.+...+..| +....++||| +.+|||+..+
T Consensus       225 ~~sa~~~~f~~~~~~~~~Dg~~~~~~~~~~~~g~~~m~n~t~~~  268 (503)
T KOG0513|consen  225 YGSAAPTIFPPILGFPSEDGQGIKTVCVLLDGGDIAMNNPTLHA  268 (503)
T ss_pred             ccccCccccCcccccccccccccceeeEEecchhhhccCchHhh
Confidence              999999999 8887777444 6788899999 9999998754

>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase

Probab=99.02  E-value=1.2e-09  Score=83.94  Aligned_cols=94  Identities=12%  Similarity=0.052  Sum_probs=74.4

Q ss_pred             CChHHHHHHHHHHhcccccccc----ccceEEEEEecCCCc-cEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEE
Q 033681           11 CDGDYQHNKIMEMLVVKFLHQT----LTDVIIPTFDIRLLQ-PISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYF   85 (113)
Q Consensus        11 y~~~~l~~~L~~~~g~~~l~d~----~~~v~i~a~di~~~~-~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~   85 (113)
                      +..+.|++++++.+|+.++.|.    .+.+.|+.++...++ |.+++-...     .++.+|.|++||+|.|++|+|+.+
T Consensus       116 ~t~~El~~~~~~~~gd~TF~Eay~~tgr~lnI~v~~~~~~~~~~lln~~T~-----Pnv~I~sAv~aS~a~P~if~~~~L  190 (323)
T cd07231         116 RTDEELQSFFRALLGDLTFQEAYDRTGRILGITVCPPRKSEPPRLLNYLTS-----PHVVIWSAVAASCAFPGLFEAQEL  190 (323)
T ss_pred             CCHHHHHHHHHHHcCcccHHHHHhccCCEEEEEEecccCCCCceeeccCCC-----CCcHHHHHHHHHcCChhhccceeE
Confidence            5678899999999999999987    567778888876664 555543332     278999999999999999999998


Q ss_pred             EecCCCCC-e----------eeeEecceeecCCCC
Q 033681           86 EMHASTGT-K----------KFNLVDGVVAANIPV  109 (113)
Q Consensus        86 ~~~~~~g~-~----------~~~~vDGGl~aNnP~  109 (113)
                      -.++.+|. .          ...++||++..+.|.
T Consensus       191 ~~Kd~~G~ivp~~~~~~~~~~~~~~DGs~~~dlP~  225 (323)
T cd07231         191 MAKDRFGEIVPYHPPGKVSSPRRWRDGSLEQDLPM  225 (323)
T ss_pred             EEECCCCCEeeccCCCccccccccccCcccccCch
Confidence            87776661 1          245999999999885

Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.

>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase

Probab=98.99  E-value=6.7e-10  Score=84.78  Aligned_cols=83  Identities=14%  Similarity=0.146  Sum_probs=62.5

Q ss_pred             hcccccccc----ccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEEEecCCCCC-----e
Q 033681           24 LVVKFLHQT----LTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHASTGT-----K   94 (113)
Q Consensus        24 ~g~~~l~d~----~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~~~~~~~g~-----~   94 (113)
                      +|+.++.|.    .+.+.|++++..+++...+-|+....    +..+|+|++||||.|++|+|+++..++.+|.     .
T Consensus       123 ~gdlTf~EA~~~tgr~lnI~vt~~~~~~~~~lln~~tsp----nv~i~sAv~AS~slP~~f~pv~l~~k~~~g~~~p~~~  198 (298)
T cd07206         123 IGDLTFQEAYERTGRIINITVAPAEPHQNSRLLNALTSP----NVLIWSAVLASCAVPGVFPPVMLMAKNRDGEIVPYLP  198 (298)
T ss_pred             HcCCCHHHHHHhcCCEEEEEEEECCCCCceEEecccCCC----chHHHHHHhhccCccccccCeEEEeecCCCccccCCC
Confidence            777776654    34677888888888776666664321    6789999999999999999999865544441     2


Q ss_pred             eeeEecceeecCCCCC
Q 033681           95 KFNLVDGVVAANIPVS  110 (113)
Q Consensus        95 ~~~~vDGGl~aNnP~~  110 (113)
                      ...|+|||+..|.|..
T Consensus       199 g~~~~DGgv~~~iPv~  214 (298)
T cd07206         199 GRKWVDGSVSDDLPAK  214 (298)
T ss_pred             CCcccCCCcCcchHHH
Confidence            3579999999999964

Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.

>TIGR03607 patatin-related protein

Probab=98.91  E-value=3.8e-09  Score=88.74  Aligned_cols=100  Identities=20%  Similarity=0.208  Sum_probs=69.2

Q ss_pred             CCChHHHHHHHHHHhccc------cccccc-----cceEEEEEecCCCccEEe-eCCC--------------------CC
Q 033681           10 QCDGDYQHNKIMEMLVVK------FLHQTL-----TDVIIPTFDIRLLQPISF-STLK--------------------AK   57 (113)
Q Consensus        10 ~y~~~~l~~~L~~~~g~~------~l~d~~-----~~v~i~a~di~~~~~~~f-~~~~--------------------~~   57 (113)
                      -|+++.++++|++.|++.      +..++.     ..+.||++|+ +|+...+ -+..                    ..
T Consensus       126 Ll~G~~l~~~L~~~L~~~~~~~~~~~~~lp~~~~~~dL~VTaTDl-~G~~~~l~dd~~~~~~e~~hr~~f~F~~~~~~~~  204 (739)
T TIGR03607       126 LLDGEYFLPLLLDALAAMVRAGPAGPSLLPTGTRPLDLFVTATDL-RGRSTRLFDDDGTVVEEREHRGVFRFTEAGRAGG  204 (739)
T ss_pred             ccccHHHHHHHHHHHHHhCCCCCCCccccccCCCCccEEEEEEcC-CCcEEEeecCCCcccccccccceeeeecccCCCC
Confidence            489999999999999754      344543     5789999999 5544332 1111                    01


Q ss_pred             cC----CCCCccHHHHHhHhccCCCCcCceEEEecC-------------------------CCC--CeeeeEecceeecC
Q 033681           58 RN----ASKVSWLSDNCIGTSAAPYYMPPYYFEMHA-------------------------STG--TKKFNLVDGVVAAN  106 (113)
Q Consensus        58 ~~----~~~~~~l~da~~ASsAaP~yF~p~~~~~~~-------------------------~~g--~~~~~~vDGGl~aN  106 (113)
                      .+    ......|..|+||||+.|++|+|+++...+                         +.+  .....|+|||+..|
T Consensus       205 ~~~d~~~~~~~~lA~AaRaSaSfP~aF~Pv~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDGGvldN  284 (739)
T TIGR03607       205 RLSDFDAANAPRLAFAARATASFPGAFPPSRLAEIDDVLARRFLPWGGRDAFLHPDFPDYAELGTTPRPRYVVDGGVLDN  284 (739)
T ss_pred             CCccccccccHHHHHHHHHhcCCCcccCceehhhhhHHHHhccCCCCccccccccccccccccCCCccceEEeecccccC
Confidence            11    112367999999999999999999764221                         012  25688999999999


Q ss_pred             CCCC
Q 033681          107 IPVS  110 (113)
Q Consensus       107 nP~~  110 (113)
                      -|..
T Consensus       285 ~Pl~  288 (739)
T TIGR03607       285 RPFA  288 (739)
T ss_pred             cchH
Confidence            8853

This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.

>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases

Probab=98.84  E-value=5.6e-09  Score=72.46  Aligned_cols=76  Identities=17%  Similarity=0.112  Sum_probs=56.6

Q ss_pred             cccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEEEecC---CCC-CeeeeEecceeec
Q 033681           30 HQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHA---STG-TKKFNLVDGVVAA  105 (113)
Q Consensus        30 ~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~~~~~---~~g-~~~~~~vDGGl~a  105 (113)
                      .+...++.|.++++++++..++.....      ...++++++||++.|.+|+++......   +.+ .+...|||||+.+
T Consensus        62 ~~~~~~~~i~~T~~~tG~~~~~~~~~~------~~~~~~av~aS~s~P~~f~~v~~~~~~~~~~~~~~~g~~lVDGG~~~  135 (155)
T cd01819          62 EALSGKLWVSFTPVTAGENVLVSRFVS------KEELIRALFASGSWPSYFGLIPPAELYTSKSNLKEKGVRLVDGGVSN  135 (155)
T ss_pred             HhcCCCeEEEEEEcCCCcEEEEecccc------chHHHHHHhHHhhhhhhcCCcccccccccccccccCCeEEeccceec
Confidence            355678899999999999999885432      235899999999999999987551000   000 1356899999999


Q ss_pred             CCCCCc
Q 033681          106 NIPVSF  111 (113)
Q Consensus       106 NnP~~~  111 (113)
                      |+|..+
T Consensus       136 ~iP~~~  141 (155)
T cd01819         136 NLPAPV  141 (155)
T ss_pred             CcCCcc
Confidence            999874

Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.

>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]

Probab=98.48  E-value=1.4e-07  Score=70.97  Aligned_cols=67  Identities=19%  Similarity=0.165  Sum_probs=52.0

Q ss_pred             ccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEEEecCCCCCeeeeEecceeecCCC
Q 033681           29 LHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIP  108 (113)
Q Consensus        29 l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~~~~~~~g~~~~~~vDGGl~aNnP  108 (113)
                      ..+.+.+..+.+++..+++...+..-.       ..-+-|++|||||+|.|-++++|++.        .|+|||+.+--|
T Consensus       112 f~~~~~k~~~~~~~~~~g~~~~~~~~~-------~~~~m~viRASSaiPf~~~~V~i~G~--------~YlDGGIsdsIP  176 (292)
T COG4667         112 FSQDKGKFFYMATCRQDGEAVYYFLPD-------VFNWLDVIRASSAIPFYSEGVEINGK--------NYLDGGISDSIP  176 (292)
T ss_pred             HhcccCCeEEEEEeccCCccceeeccc-------HHHHHHHHHHhccCCCCCCCeEECCE--------ecccCccccccc
Confidence            345557788999998888766554332       23477999999999999999999654        699999998888


Q ss_pred             CC
Q 033681          109 VS  110 (113)
Q Consensus       109 ~~  110 (113)
                      +.
T Consensus       177 vq  178 (292)
T COG4667         177 VK  178 (292)
T ss_pred             ch
Confidence            64

>cd07229 Pat_TGL3_like Triacylglycerol lipase 3

Probab=98.47  E-value=7.1e-07  Score=70.52  Aligned_cols=80  Identities=11%  Similarity=-0.045  Sum_probs=64.2

Q ss_pred             ccCCChHHHHHHHHHHhccccccccc----cceEEEEEecC-CCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcC-
Q 033681            8 LSQCDGDYQHNKIMEMLVVKFLHQTL----TDVIIPTFDIR-LLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMP-   81 (113)
Q Consensus         8 ~~~y~~~~l~~~L~~~~g~~~l~d~~----~~v~i~a~di~-~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~-   81 (113)
                      +..+|.+.|++++++.+|+.++.|..    +.+.|+.+... ++.|.+++-....     ++.+|.|++||+|.|+.|+ 
T Consensus       181 G~l~D~~~l~~~lr~~lgd~TFeEAy~rTgriLnItv~~~~~~~~p~LLNylTaP-----nVlIwsAv~aS~a~p~~~~~  255 (391)
T cd07229         181 GYFLDVKVLEEFVRANLGDLTFEEAYARTGRVLNITVAPSAVSGSPNLLNYLTAP-----NVLIWSAALASNASSAALYR  255 (391)
T ss_pred             CCcccHHHHHHHHHHHcCCCcHHHHHHhhCCEEEEEEECCCCCCCCeeeecCCCC-----CchHHHHHHHHcCCccccCC
Confidence            34689999999999999999999864    55667777654 5677777655432     7999999999999998887 


Q ss_pred             ceEEEecCCCC
Q 033681           82 PYYFEMHASTG   92 (113)
Q Consensus        82 p~~~~~~~~~g   92 (113)
                      |+.+-.++.+|
T Consensus       256 ~~~L~~Kd~~G  266 (391)
T cd07229         256 SVTLLCKDETG  266 (391)
T ss_pred             CceEEEECCCC
Confidence            99998887666

Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.

>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]

Probab=97.60  E-value=1.3e-05  Score=65.30  Aligned_cols=93  Identities=16%  Similarity=0.084  Sum_probs=66.6

Q ss_pred             CccCCChHHHHHHHHHHhcccccccccc-ceEEEEE--ecCCCccEEeeCCCCCcC----------------CCCCccHH
Q 033681            7 ILSQCDGDYQHNKIMEMLVVKFLHQTLT-DVIIPTF--DIRLLQPISFSTLKAKRN----------------ASKVSWLS   67 (113)
Q Consensus         7 ~~~~y~~~~l~~~L~~~~g~~~l~d~~~-~v~i~a~--di~~~~~~~f~~~~~~~~----------------~~~~~~l~   67 (113)
                      .++.|+...|+.+++..||...+-|... ++.|+..  |+..-+...+++|+...+                ..-...+|
T Consensus       365 ~r~~~~~~~Ie~~~~~~~G~~~~~di~~~~~nl~~~~~~~~~~~l~~~rn~~~~i~~~~~~~~~~snde~~~~~~~~l~w  444 (503)
T KOG0513|consen  365 LRSEYNYVRIECAIDRLFGDAPSMDIDGIRLNLTGLLVDITGEELLMARNYRHNINGGKPRSEEVSNDEALEEPAMQLVW  444 (503)
T ss_pred             ccCCCCccchhhhhhcccCccccccCCcchhhhhhhhccccHHHHHHhhccccccccccccccccccchhhhhHHHHHHH
Confidence            4578999999999999999988888775 4445443  333223344455433110                11245799


Q ss_pred             HHHhHhccCCCCcCceEEEecCCCCCeeeeEecceeecCCCCC
Q 033681           68 DNCIGTSAAPYYMPPYYFEMHASTGTKKFNLVDGVVAANIPVS  110 (113)
Q Consensus        68 da~~ASsAaP~yF~p~~~~~~~~~g~~~~~~vDGGl~aNnP~~  110 (113)
                      ++.|.|+++|.+|++..-           .++|||..+|||.+
T Consensus       445 e~~rrss~a~~~f~~~~~-----------~~~d~~~~~~n~~l  476 (503)
T KOG0513|consen  445 EAKRRSSRAPPTFPPSEG-----------KFIDGGLIANNPAL  476 (503)
T ss_pred             HHHHhccCCCCccccccc-----------ceeecCccCCCcch
Confidence            999999999999998732           59999999999975

>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]

Probab=97.55  E-value=4.5e-05  Score=65.42  Aligned_cols=87  Identities=17%  Similarity=0.125  Sum_probs=71.2

Q ss_pred             cCCChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceEEEec
Q 033681            9 SQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYYFEMH   88 (113)
Q Consensus         9 ~~y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~~~~~   88 (113)
                      +.+++..+.+-+.+.|||..++|+=.+.++.++||.+-.-.+-+          +-.+|.-+|||.+.-+|.||.--+ +
T Consensus       920 smftGh~FNrsI~~~Fgd~~IEDlWi~yfciTTdIt~S~mriH~----------~G~~WrYvRASMsLaGylPPlcdp-~  988 (1158)
T KOG2968|consen  920 SMFTGHEFNRSIHSTFGDVLIEDLWIPYFCITTDITSSEMRVHR----------NGSLWRYVRASMSLAGYLPPLCDP-K  988 (1158)
T ss_pred             hccchhhhhhHHHHHhcccchhhhhheeeecccccchhhhhhhc----------CCchHHHHHhhccccccCCCCCCC-C
Confidence            56788899999999999999999999988888998665444433          446999999999999999998432 1


Q ss_pred             CCCCCeeeeEecceeecCCCCCc
Q 033681           89 ASTGTKKFNLVDGVVAANIPVSF  111 (113)
Q Consensus        89 ~~~g~~~~~~vDGGl~aNnP~~~  111 (113)
                           ....++|||-.+|-|+.+
T Consensus       989 -----dGhlLlDGGYvnNlPadv 1006 (1158)
T KOG2968|consen  989 -----DGHLLLDGGYVNNLPADV 1006 (1158)
T ss_pred             -----CCCEEecccccccCcHHH
Confidence                 235899999999999764

>KOG3773 consensus Adiponutrin and related vesicular transport proteins; predicted alpha/beta hydrolase [Intracellular trafficking, secretion, and vesicular transport]

Probab=97.17  E-value=0.00084  Score=52.14  Aligned_cols=90  Identities=14%  Similarity=0.165  Sum_probs=68.9

Q ss_pred             CccC-CChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcC--ce
Q 033681            7 ILSQ-CDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMP--PY   83 (113)
Q Consensus         7 ~~~~-y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~--p~   83 (113)
                      +.|- +.++.|.+.|+.++...-......++.|.-+.++.++-++.+.+..      ..-|.|+.+||+-+|.|=+  |-
T Consensus        82 ~tP~f~~~~~l~~~le~~LPpda~~la~~rl~iSlTr~~~~~N~lis~F~s------~~~liq~L~~scyiP~ysg~~pp  155 (354)
T KOG3773|consen   82 FTPGFNLSDRLRSGLEDFLPPDAHWLASGRLHISLTRVKDRENVLISEFPS------RDELIQALMCSCYIPMYSGLKPP  155 (354)
T ss_pred             CCCCcCHHHHHHHHHHHhCChHHHHHhhcceeEEEEeeeehhhhhhhcccc------HHHHHHHHHHhccCccccCCCCc
Confidence            4444 4678999999999987655556778889988888887777776654      3359999999999999966  22


Q ss_pred             EEEecCCCCCeeeeEecceeecCCCCC
Q 033681           84 YFEMHASTGTKKFNLVDGVVAANIPVS  110 (113)
Q Consensus        84 ~~~~~~~~g~~~~~~vDGGl~aNnP~~  110 (113)
                      .+        +...|||||+..|-|..
T Consensus       156 ~~--------rg~~yiDGg~snnlP~~  174 (354)
T KOG3773|consen  156 IF--------RGVRYIDGGTSNNLPEA  174 (354)
T ss_pred             ce--------eeEEEeccccccccccc
Confidence            22        34479999999999964

>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]

Probab=95.21  E-value=0.011  Score=48.44  Aligned_cols=94  Identities=12%  Similarity=0.122  Sum_probs=65.7

Q ss_pred             cCCChHHHHHHHHHHhcccccccccc------ceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCc
Q 033681            9 SQCDGDYQHNKIMEMLVVKFLHQTLT------DVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPP   82 (113)
Q Consensus         9 ~~y~~~~l~~~L~~~~g~~~l~d~~~------~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p   82 (113)
                      ..+|-..+...+++++|+.++.+...      .++|+..+. .+.|.+.....++     ++.+|-|+-||+|.|++|++
T Consensus       261 ~~~Di~~l~~~~~~~~~~lTFqEAY~rTGrIlNItV~p~s~-~e~P~lLNylTaP-----nVLIWSAV~aScs~pgif~~  334 (543)
T KOG2214|consen  261 ALFDISHLACVMKKRLGNLTFQEAYDRTGRILNIVVPPSSK-SEPPRLLNYLTAP-----NVLIWSAVCASCSVPGIFES  334 (543)
T ss_pred             hHHHHHHHHHHHHHHhcchhHHHHHHhhCceEEEEECcccc-CCChhHhhccCCC-----ceehhHHHHHhcccccccCc
Confidence            45677788899999999888887642      345555553 6677776655442     78999999999999999998


Q ss_pred             eEEEecCCCCC--------eeeeEecceeecCCC
Q 033681           83 YYFEMHASTGT--------KKFNLVDGVVAANIP  108 (113)
Q Consensus        83 ~~~~~~~~~g~--------~~~~~vDGGl~aNnP  108 (113)
                      ..+-..+..|.        ....+.||-+-.-+|
T Consensus       335 ~~Ll~Kd~t~ei~p~~~~~~~~r~~dgsl~~d~P  368 (543)
T KOG2214|consen  335 TPLLAKDLTNEIEPFIVTFSEPRFMDGSLDNDLP  368 (543)
T ss_pred             cHHHHhhccCcEeeccCCccchhhccCcccccCc
Confidence            87655442221        223467777766655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	113
1oxw_A	373	The Crystal Structure Of Semet Patatin Length = 373		1e-11

>pdb|1OXW|A Chain A, The Crystal Structure Of Semet Patatin Length = 373

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 12  DGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCI 71
           DG Y    + E L    +HQ LT+V+I +FDI+  +P+ F+      +    +   D   
Sbjct: 113 DGKYLXQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPELDAKXYDISY 172
Query: 72  GTSAAPYYMPPYYFEMHASTGTK-KFNLVDGVVA 104
            T+AAP Y PP+YF  + S G + +FNLVDG VA
Sbjct: 173 STAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAVA 206

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	113
1oxw_A	373	Patatin; alpha/beta class fold with approximately	3e-10

>1oxw_A Patatin; alpha/beta class fold with approximately three layers; 2.20A {Solanum cardiophyllum} SCOP: c.19.1.3 Length = 373

 Score = 54.9 bits (131), Expect = 3e-10
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 2/111 (1%)

Query: 1   MGRKRSILSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNA 60
               + +  + DG Y    + E L    +HQ LT+V+I +FDI+  +P+ F+      + 
Sbjct: 102 NPSGQILGPKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSP 161

Query: 61  SKVSWLSDNCIGTSAAPYYMPPYYFEMHASTGTK-KFNLVDG-VVAANIPV 109
              + + D    T+AAP Y PP+YF  + S G + +FNLVDG V     P 
Sbjct: 162 ELDAKMYDISYSTAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAVATVADPA 212

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	113
1oxw_A	373	Patatin; alpha/beta class fold with approximately	99.93
4akf_A	577	VIPD; transferase; 2.90A {Legionella pneumophila}	99.63
3tu3_B	711	EXOU; type III secretion system, SPC infectious di	99.42

>1oxw_A Patatin; alpha/beta class fold with approximately three layers; 2.20A {Solanum cardiophyllum} SCOP: c.19.1.3

Probab=99.93  E-value=9.4e-26  Score=174.44  Aligned_cols=108  Identities=35%  Similarity=0.542  Sum_probs=94.5

Q ss_pred             ccCccCCChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceE
Q 033681            5 RSILSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYY   84 (113)
Q Consensus         5 ~~~~~~y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~   84 (113)
                      .+.+++|+++.|+++|++.||+.+|.|+.++++|+++|+.++++++|++++...++..+.++|||+|||||+|+||||++
T Consensus       106 ~l~~~~~~~~~L~~~l~~~~~~~~l~d~~~~~~i~atd~~~~~~~~f~~~~~~~~~~~~~~l~~av~ASsA~P~~F~p~~  185 (373)
T 1oxw_A          106 QILGPKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPELDAKMYDISYSTAAAPTYFPPHY  185 (373)
T ss_dssp             CSSSCSCCCHHHHHHHHHHHTTCBGGGCSSEEEEEEEETTTTEEEEEESSSTTTCGGGCCBHHHHHHHHHCCTTTSCCEE
T ss_pred             ccccCCcCcHHHHHHHHHHHCcCcHHHcCCCEEEEeEECCCCCeEEEeCCCCCCCCccCchHHHHHHHHccCCcCcCcEE
Confidence            35678999999999999999999999999999999999999999999999865555668899999999999999999999


Q ss_pred             EEecCCCCC-eeeeEecceeec-CCCCCcC
Q 033681           85 FEMHASTGT-KKFNLVDGVVAA-NIPVSFS  112 (113)
Q Consensus        85 ~~~~~~~g~-~~~~~vDGGl~a-NnP~~~~  112 (113)
                      +.+.+.+|. .++.|||||+.+ |||+..|
T Consensus       186 i~~~d~~G~~~~~~~vDGGv~~~NnP~~~a  215 (373)
T 1oxw_A          186 FVTNTSNGDEYEFNLVDGAVATVADPALLS  215 (373)
T ss_dssp             EEEECTTSCEEEEEEEEGGGGTCSSCHHHH
T ss_pred             eeccCCCCcccceeeecCcccccCChHHHH
Confidence            976543342 246899999999 9998754

>4akf_A VIPD; transferase; 2.90A {Legionella pneumophila}

Probab=99.63  E-value=1.7e-16  Score=127.70  Aligned_cols=64  Identities=13%  Similarity=0.066  Sum_probs=55.1

Q ss_pred             ceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCceE-EEecCCCCCeeeeEecceeecCCCCCc
Q 033681           35 DVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPPYY-FEMHASTGTKKFNLVDGVVAANIPVSF  111 (113)
Q Consensus        35 ~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p~~-~~~~~~~g~~~~~~vDGGl~aNnP~~~  111 (113)
                      ++.|+++|+.+|++++|++...     .+..++||+|||||+|++|+|+. ++        ...|+|||+.+|+|+..
T Consensus       237 ~L~IvATDv~TGk~v~F~~~~~-----~d~~l~dAVRASsAlP~~F~PV~~Id--------G~~yvDGGV~~N~PV~~  301 (577)
T 4akf_A          237 NLSVVVTNQTKHELERYSEDTT-----PQQSIAQVVQWSGAHPVLFVPGRNAK--------GEYIADGGILDNMPEIE  301 (577)
T ss_dssp             EEEEEEEETTTTEEEEEETTTC-----TTSBHHHHHHHHTCCTTTBCCEECTT--------CCEEECTTSSSCCCCCT
T ss_pred             eEEEEEEECCCCCEEEeCCCCC-----CCCCHHHHHHHHhCccccccCEEeEC--------CEEEECCCcccCCchHH
Confidence            7999999999999999997632     25679999999999999999994 52        34799999999999863

>3tu3_B EXOU; type III secretion system, SPC infectious diseases, structural genomics, center for struct genomics of infectious diseases, csgid; 1.92A {Pseudomonas aeruginosa} PDB: 4akx_B*

Probab=99.42  E-value=1.3e-13  Score=112.43  Aligned_cols=92  Identities=12%  Similarity=0.042  Sum_probs=47.9

Q ss_pred             hHHHHHHHHHHhc--cccccccc---------cceEEEEEecCCCcc--EEeeCCCCCcCCCCCccHHHHHhHhccCCCC
Q 033681           13 GDYQHNKIMEMLV--VKFLHQTL---------TDVIIPTFDIRLLQP--ISFSTLKAKRNASKVSWLSDNCIGTSAAPYY   79 (113)
Q Consensus        13 ~~~l~~~L~~~~g--~~~l~d~~---------~~v~i~a~di~~~~~--~~f~~~~~~~~~~~~~~l~da~~ASsAaP~y   79 (113)
                      +..++.+++++.+  +.++.|+.         +.+.|+++|+.++++  ++|.....     .+..+|+|+|||||+|+|
T Consensus       272 ~~~l~~Ll~rL~~~~~ITF~dL~~L~~~~P~~k~L~IvATNL~TGkpelvyFs~~~t-----Pd~~I~dAVRASsSlP~v  346 (711)
T 3tu3_B          272 QPTVAAIASRLQSGSGVTFGDLDRLSAYIPQIKTLNITGTAMFEGRPQLVVFNASHT-----PDLEVAQAAHISGSFPGV  346 (711)
T ss_dssp             SHHHHHHHHHHHTTCCCBHHHHHHHHTTCTTSCEEEEEEEEEETTEEEEEEESTTTC-----TTSBHHHHHHHHHHCC--
T ss_pred             chhHHHHHHHhcCCCCCCHHHHHHHhhcCCCCceEEEEEEECCCCCcceEEeCCCCC-----CCchHHHHHHHHhccccc
Confidence            3444455555543  45555543         469999999999997  58865432     257899999999999999


Q ss_pred             cCceEEEecC-CCCCeeeeEecceeecCCCC
Q 033681           80 MPPYYFEMHA-STGTKKFNLVDGVVAANIPV  109 (113)
Q Consensus        80 F~p~~~~~~~-~~g~~~~~~vDGGl~aNnP~  109 (113)
                      |+|+.+.... ..+.....|+|||+.+|+|+
T Consensus       347 F~PV~I~G~~f~~~~e~~~YVDGGIsdNiPI  377 (711)
T 3tu3_B          347 FQKVSLSDQPYQAGVEWTEFQDGGVMINVPV  377 (711)
T ss_dssp             --------------------------CCCCG
T ss_pred             CCCEEECCccccccccCceEeecCcCCCcCH
Confidence            9999886430 00012237999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	113
d1oxwa_	360	c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solan	1e-08

>d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]} Length = 360

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: Patatin
domain: Patatin
species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]

 Score = 48.8 bits (115), Expect = 1e-08
 Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 9   SQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSD 68
            + DG Y    + E L    +HQ LT+V+I +FDI+  +P+ F+      +    + + D
Sbjct: 99  PKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPELDAKMYD 158

Query: 69  NCIGTSAAPYYMPPYYFEMHASTGTK-KFNLVDGVVAANIP 108
               T+AAP Y PP+YF  + S G + +FNLVDG VA    
Sbjct: 159 ISYSTAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAVATVAD 199

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	113
d1oxwa_	360	Patatin {Heartleaf nightshade (Solanum cardiophyll	99.88

>d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]}

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: Patatin
domain: Patatin
species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]

Probab=99.88  E-value=4.4e-23  Score=154.35  Aligned_cols=110  Identities=35%  Similarity=0.522  Sum_probs=95.3

Q ss_pred             ccccCccCCChHHHHHHHHHHhccccccccccceEEEEEecCCCccEEeeCCCCCcCCCCCccHHHHHhHhccCCCCcCc
Q 033681            3 RKRSILSQCDGDYQHNKIMEMLVVKFLHQTLTDVIIPTFDIRLLQPISFSTLKAKRNASKVSWLSDNCIGTSAAPYYMPP   82 (113)
Q Consensus         3 ~~~~~~~~y~~~~l~~~L~~~~g~~~l~d~~~~v~i~a~di~~~~~~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yF~p   82 (113)
                      +..+.+++|+.+.|+++|++.||+.++.+..+++.++++++.++++++|++++...+...+.+||||++||||+|+||||
T Consensus        93 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~ASsA~P~~F~p  172 (360)
T d1oxwa_          93 SGQILGPKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPELDAKMYDISYSTAAAPTYFPP  172 (360)
T ss_dssp             CCCSSSCSCCCHHHHHHHHHHHTTCBGGGCSSEEEEEEEETTTTEEEEEESSSTTTCGGGCCBHHHHHHHHHCCTTTSCC
T ss_pred             cccccCcccchHHHHHHHHHHhCCchhhhccCcceeEecccCCCCeEEEeccccccCCcccchHHHhhhhhhcCCCCCCC
Confidence            34556889999999999999999999999999999999999999999999988766666789999999999999999999


Q ss_pred             eEEEecCCCC-CeeeeEecceeecC-CCCCcC
Q 033681           83 YYFEMHASTG-TKKFNLVDGVVAAN-IPVSFS  112 (113)
Q Consensus        83 ~~~~~~~~~g-~~~~~~vDGGl~aN-nP~~~~  112 (113)
                      +++.+....| ...+.|+|||+.+| ||+.+|
T Consensus       173 ~~~~~~~~~~~~~~~~~~Dgg~~~~nnp~~~a  204 (360)
T d1oxwa_         173 HYFVTNTSNGDEYEFNLVDGAVATVADPALLS  204 (360)
T ss_dssp             EEEEEECTTSCEEEEEEEEGGGGTCSSCHHHH
T ss_pred             EEEecccCCCCceeEEecccchhhccCchHHH
Confidence            9998754322 35667999999865 787654