Citrus Sinensis ID: 033866

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Protein Sequence
MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKKK
Secondary Structure (PSIPRED)
ccccccccccEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEcccccEccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHcHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcHccc
Coil and Loop (DISEMBL)
mapkqpntglfvglnkghivtkkelpprpadrkgktskrVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRksrapgggekkk
Flexible Loop (DISEMBL)
mapkqpntglfvglnkghivtkkelpprpadrkgktskrvhfvrtvirevagfapyekRITEllkvgkdkralkvakrklgthkrakkkreemsnalrksrapgggekkk
Low Complexity Region (SEG)
MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKKK
Disordered region (IsUnstruct)
*********LFVGLNKGHIV******************RVHFVRTVIREVAGFAPYEKRITELLKVGKD*****************************************
Disordered Region (DISOPRED)
*****PNTGLFVGLNKGHIV*********************FVRTVIREVAGFAPYEKRITEL**********KVAKRKLGTHKRA************************
Disordered Region (DISEMBL)
MAPKQPNTGLFVGLNKGHIVTKKELPP***********RVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKR********************************
Disordered Region (DISPRO)
******NTGLFVGLNKGHIVTK*************TSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAP*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	110	2.2.26 [Sep-21-2011]
Q9M352	112	60S ribosomal protein L36	yes	no	1.0	0.982	0.767	7e-40
O80929	113	60S ribosomal protein L36	no	no	0.9	0.876	0.808	3e-39
Q9LZ57	108	60S ribosomal protein L36	no	no	0.936	0.953	0.8	3e-39
P52866	106	60S ribosomal protein L36	N/A	no	0.809	0.839	0.808	1e-35
Q9LRB8	101	60S ribosomal protein L36	N/A	no	0.890	0.970	0.683	2e-29
Q92365	99	60S ribosomal protein L36	yes	no	0.872	0.969	0.574	2e-26
O94658	99	60S ribosomal protein L36	yes	no	0.872	0.969	0.574	3e-25
Q4PM12	110	60S ribosomal protein L36	N/A	no	0.8	0.8	0.647	1e-24
Q6DER2	105	60S ribosomal protein L36	yes	no	0.854	0.895	0.597	3e-24
Q66KU4	105	60S ribosomal protein L36	N/A	no	0.854	0.895	0.597	3e-24

>sp|Q9M352|RL362_ARATH 60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B PE=2 SV=1

 Score =  162 bits (409), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 86/112 (76%), Positives = 95/112 (84%), Gaps = 2/112 (1%)

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++EL PRP  RKGKTSKR  F+R +I+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGG--EKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ GGG  EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

Arabidopsis thaliana (taxid: 3702)

>sp|O80929|RL361_ARATH 60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A PE=2 SV=1

 Score =  160 bits (404), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 80/99 (80%), Positives = 88/99 (88%)

Query: 8   TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VT++EL PRP  RKGKTSKR  F+R +IREVAG APYEKRITELLKVG
Sbjct: 8   TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGG 106
           KDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ GG 
Sbjct: 68  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGA 106

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZ57|RL363_ARATH 60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C PE=3 SV=1

 Score =  160 bits (404), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 84/105 (80%), Positives = 93/105 (88%), Gaps = 2/105 (1%)

Query: 8   TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VTK+E PPRP +RKGKTSKR  F+R +I+EVAG APYEKRITELLKVG
Sbjct: 4   TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGG--EKKK 110
           KDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ G G  EKKK
Sbjct: 64  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGASEKKK 108

Arabidopsis thaliana (taxid: 3702)

>sp|P52866|RL36_DAUCA 60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2

 Score =  147 bits (372), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/89 (80%), Positives = 80/89 (89%)

Query: 1  MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
          MAPKQPNTGLFVGLNKGHIVTKKEL PRP+DRKGKTSKR HFVR +IREVAGF PYEKRI
Sbjct: 1  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRI 60

Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKK 89
          TELLKVGKDKRALKV + K+G  + +K++
Sbjct: 61 TELLKVGKDKRALKVRQEKVGHSQESKEE 89

Daucus carota (taxid: 4039)

>sp|Q9LRB8|RL36_ENTCP 60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3 SV=1

 Score =  127 bits (320), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/98 (68%), Positives = 77/98 (78%)

Query: 10  LFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 69
           + VGLNKGH VTKK   PRP+ RKG  S+RV  VR V+REVAG+APYE+R+ ELLKVGKD
Sbjct: 4   IAVGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKD 63

Query: 70  KRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGE 107
           KRALK+ KRKLGTH R KKKREEM+  LRK +A   GE
Sbjct: 64  KRALKMCKRKLGTHMRGKKKREEMAGVLRKMQAASKGE 101

Enteromorpha compressa (taxid: 63659)

>sp|Q92365|RL36A_SCHPO 60S ribosomal protein L36-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl36a PE=3 SV=2

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 80/101 (79%), Gaps = 5/101 (4%)

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           MAP     GL VGLNKG ++TK++LP RP+ RKG+ SKR  FVR+++REVAGFAPYE+R+
Sbjct: 1   MAP-----GLVVGLNKGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRV 55

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 101
            EL++  +DKRA K+AK++LGT KRAK K EE+++ ++ SR
Sbjct: 56  MELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|O94658|RL36B_SCHPO 60S ribosomal protein L36-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl36b PE=3 SV=1

 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 78/101 (77%), Gaps = 5/101 (4%)

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           MAP     GL VGLNKG  +TK++LP RP+ RKG  SKR  FVR+++REVAGFAPYE+R+
Sbjct: 1   MAP-----GLVVGLNKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRV 55

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 101
            EL++  +DKRA K+AK++LGT KRAK K EE+++ ++ SR
Sbjct: 56  MELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q4PM12|RL36_IXOSC 60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/88 (64%), Positives = 66/88 (75%)

Query: 10 LFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 69
          L VGL KGH VTK E  PRP+ RKG  SK   FVR +IREV GFAP+E+R  ELLKV KD
Sbjct: 7  LAVGLGKGHKVTKNEYKPRPSRRKGALSKHTRFVRDLIREVCGFAPFERRAMELLKVSKD 66

Query: 70 KRALKVAKRKLGTHKRAKKKREEMSNAL 97
          KRALK  K++LGTH R K+KR+E+SN L
Sbjct: 67 KRALKFIKKRLGTHLRGKRKRDELSNVL 94

Ixodes scapularis (taxid: 6945)

>sp|Q6DER2|RL36_XENTR 60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3 SV=1

 Score =  110 bits (275), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 3/97 (3%)

Query: 1  MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
          MA + P   + VGLNKGH VTK    PR   R+G+ +K   FVR +IREV GFAPYE+R 
Sbjct: 1  MAIRYP---MAVGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRA 57

Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNAL 97
           ELLKV KDKRALK  K+++GTH RAK+KREE+SN L
Sbjct: 58 MELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVL 94

Xenopus tropicalis (taxid: 8364)

>sp|Q66KU4|RL36_XENLA 60S ribosomal protein L36 OS=Xenopus laevis GN=rpl36 PE=3 SV=1

 Score =  110 bits (275), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 3/97 (3%)

Query: 1  MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
          MA + P   + VGLNKGH VTK    PR   R+G+ +K   FVR +IREV GFAPYE+R 
Sbjct: 1  MAIRYP---MAVGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRA 57

Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNAL 97
           ELLKV KDKRALK  K+++GTH RAK+KREE+SN L
Sbjct: 58 MELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVL 94

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
224116904	110	predicted protein [Populus trichocarpa]	1.0	1.0	0.918	1e-49
297745282	145	unnamed protein product [Vitis vinifera]	1.0	0.758	0.909	3e-49
224079093	110	predicted protein [Populus trichocarpa]	1.0	1.0	0.918	6e-49
225464487	110	PREDICTED: 60S ribosomal protein L36-3 i	1.0	1.0	0.918	6e-49
225454218	110	PREDICTED: 60S ribosomal protein L36-3 [	1.0	1.0	0.909	6e-49
356574026	110	PREDICTED: 60S ribosomal protein L36-3 [	1.0	1.0	0.9	2e-48
388500776	110	unknown [Lotus japonicus]	1.0	1.0	0.890	3e-48
224137042	110	predicted protein [Populus trichocarpa]	1.0	1.0	0.890	3e-48
224119984	110	predicted protein [Populus trichocarpa]	1.0	1.0	0.890	3e-48
197312875	110	ribosomal protein L36 [Rheum australe]	1.0	1.0	0.890	3e-48

>gi|224116904|ref|XP_002317423.1| predicted protein [Populus trichocarpa] gi|222860488|gb|EEE98035.1| predicted protein [Populus trichocarpa]

 Score =  199 bits (507), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 101/110 (91%), Positives = 105/110 (95%)

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKEL PRP+DRKGKTSKRV FVR++IREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVQFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSN LRK RA GGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRAAGGGEKKK 110

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745282|emb|CBI40362.3| unnamed protein product [Vitis vinifera]

 Score =  198 bits (504), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 100/110 (90%), Positives = 105/110 (95%)

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGH+VTKKELPPRP+DRKGKTSKRVHFVR +IREVAGFAPYEKRI
Sbjct: 36  MAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNIIREVAGFAPYEKRI 95

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+ LRK R+ G GEKKK
Sbjct: 96  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSGGVGEKKK 145

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079093|ref|XP_002305746.1| predicted protein [Populus trichocarpa] gi|118484529|gb|ABK94139.1| unknown [Populus trichocarpa] gi|118487398|gb|ABK95527.1| unknown [Populus trichocarpa] gi|222848710|gb|EEE86257.1| predicted protein [Populus trichocarpa]

 Score =  197 bits (502), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 101/110 (91%), Positives = 104/110 (94%)

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKEL PRP+DRKGKTSKRV FVR++IREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSN LRK RA GG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAAGGAEKKK 110

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464487|ref|XP_002268801.1| PREDICTED: 60S ribosomal protein L36-3 isoform 2 [Vitis vinifera] gi|225464489|ref|XP_002268754.1| PREDICTED: 60S ribosomal protein L36-3 isoform 1 [Vitis vinifera] gi|302143845|emb|CBI22706.3| unnamed protein product [Vitis vinifera]

 Score =  197 bits (501), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 101/110 (91%), Positives = 105/110 (95%)

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELPPRP+DRKGKTSKRVHFVR +IREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+ LRK R+ G GEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSGGVGEKKK 110

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454218|ref|XP_002273507.1| PREDICTED: 60S ribosomal protein L36-3 [Vitis vinifera] gi|147820141|emb|CAN64895.1| hypothetical protein VITISV_013224 [Vitis vinifera]

 Score =  197 bits (501), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 100/110 (90%), Positives = 105/110 (95%)

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGH+VTKKELPPRP+DRKGKTSKRVHFVR +IREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNIIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+ LRK R+ G GEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSGGVGEKKK 110

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574026|ref|XP_003555154.1| PREDICTED: 60S ribosomal protein L36-3 [Glycine max]

 Score =  196 bits (497), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 99/110 (90%), Positives = 104/110 (94%)

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           MAPK P+TGLFVGLNKGH+VTKKELPPRP+DRKGKTSKRVHFVR +IREVAGFAPYEKRI
Sbjct: 1   MAPKHPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSN LRK RA G G+KKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 110

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500776|gb|AFK38454.1| unknown [Lotus japonicus]

 Score =  195 bits (496), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 98/110 (89%), Positives = 105/110 (95%)

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           MAPKQP+TGLFVGLNKGH+VTKKEL PRP+DRKGKTSKRVHFVR++IREVAGFAPYEKRI
Sbjct: 1   MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSN LRK RA G G+KKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRAGGAGDKKK 110

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137042|ref|XP_002322479.1| predicted protein [Populus trichocarpa] gi|118482219|gb|ABK93038.1| unknown [Populus trichocarpa] gi|118484900|gb|ABK94316.1| unknown [Populus trichocarpa] gi|222869475|gb|EEF06606.1| predicted protein [Populus trichocarpa]

 Score =  195 bits (496), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 98/110 (89%), Positives = 105/110 (95%)

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGH+VTKK+L PRP+DRKGK+SKRV FVR++IREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHVVTKKDLAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSN LRK R+ GGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAGGGEKKK 110

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119984|ref|XP_002318214.1| predicted protein [Populus trichocarpa] gi|118484769|gb|ABK94253.1| unknown [Populus trichocarpa] gi|222858887|gb|EEE96434.1| predicted protein [Populus trichocarpa]

 Score =  195 bits (495), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 98/110 (89%), Positives = 105/110 (95%)

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGH+VTKK+L PRP+DRKGK+SKRV FVR++IREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHVVTKKDLAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSN LRK RA GGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRAAGGGEKKK 110

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|197312875|gb|ACH63218.1| ribosomal protein L36 [Rheum australe]

 Score =  195 bits (495), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 98/110 (89%), Positives = 104/110 (94%)

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           MAPKQP++GLFVGLNKGHIVTKKELP +P+DRKGKTSKRVHFVR +IREVAGFAPYEKRI
Sbjct: 1   MAPKQPSSGLFVGLNKGHIVTKKELPAKPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSN LRK R+ GG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAGGAEKKK 110

Source: Rheum australe

Species: Rheum australe

Genus: Rheum

Family: Polygonaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
TAIR|locus:2084395	112	AT3G53740 [Arabidopsis thalian	1.0	0.982	0.767	4.2e-40
TAIR|locus:2181758	108	AT5G02450 [Arabidopsis thalian	0.936	0.953	0.8	2.3e-39
TAIR|locus:2040756	113	AT2G37600 [Arabidopsis thalian	0.927	0.902	0.790	2.1e-38
POMBASE|SPCC970.05	99	rpl3601 "60S ribosomal protein	0.845	0.939	0.591	3.2e-26
POMBASE|SPBC405.07	99	rpl3602 "60S ribosomal protein	0.845	0.939	0.591	1.8e-25
UNIPROTKB|Q9Y3U8	105	RPL36 "60S ribosomal protein L	0.9	0.942	0.580	9.7e-25
UNIPROTKB|F2Z5K6	105	RPL36 "Uncharacterized protein	0.9	0.942	0.580	9.7e-25
RGD|2322117	105	LOC100360439 "ribosomal protei	0.9	0.942	0.580	9.7e-25
UNIPROTKB|Q3T171	105	RPL36 "60S ribosomal protein L	0.9	0.942	0.580	1.6e-24
RGD|2319728	104	LOC100361644 "ribosomal protei	0.9	0.951	0.571	2e-24

TAIR|locus:2084395 AT3G53740 [Arabidopsis thaliana (taxid:3702)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 86/112 (76%), Positives = 95/112 (84%)

Query:     1 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
             M   Q  TGLFVGLNKGH+VT++EL PRP  RKGKTSKR  F+R +I+EVAG APYEKRI
Sbjct:     1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query:    61 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGG--EKKK 110
             TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ GGG  EKKK
Sbjct:    61 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005840 "ribosome" evidence=IEA;ISS

GO:0006412 "translation" evidence=IEA;ISS

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2181758 AT5G02450 [Arabidopsis thaliana (taxid:3702)]

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 84/105 (80%), Positives = 93/105 (88%)

Query:     8 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 67
             TGLFVGLNKGH+VTK+E PPRP +RKGKTSKR  F+R +I+EVAG APYEKRITELLKVG
Sbjct:     4 TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63

Query:    68 KDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGG--EKKK 110
             KDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ G G  EKKK
Sbjct:    64 KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGASEKKK 108

GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005840 "ribosome" evidence=IEA;ISS

GO:0006412 "translation" evidence=IEA;ISS

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2040756 AT2G37600 [Arabidopsis thaliana (taxid:3702)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 83/105 (79%), Positives = 91/105 (86%)

Query:     8 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 67
             TGLFVGLNKGH+VT++EL PRP  RKGKTSKR  F+R +IREVAG APYEKRITELLKVG
Sbjct:     8 TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67

Query:    68 KDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGG---EKK 109
             KDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ GG    EKK
Sbjct:    68 KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112

GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005840 "ribosome" evidence=IEA;ISS

GO:0006412 "translation" evidence=IEA;ISS

GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA

POMBASE|SPCC970.05 rpl3601 "60S ribosomal protein L36" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 55/93 (59%), Positives = 77/93 (82%)

Query:     9 GLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGK 68
             GL VGLNKG ++TK++LP RP+ RKG+ SKR  FVR+++REVAGFAPYE+R+ EL++  +
Sbjct:     4 GLVVGLNKGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQ 63

Query:    69 DKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 101
             DKRA K+AK++LGT KRAK K EE+++ ++ SR
Sbjct:    64 DKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96

GO:0002181 "cytoplasmic translation" evidence=NAS

GO:0003735 "structural constituent of ribosome" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006412 "translation" evidence=ISO

GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO

POMBASE|SPBC405.07 rpl3602 "60S ribosomal protein L36" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 55/93 (59%), Positives = 75/93 (80%)

Query:     9 GLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGK 68
             GL VGLNKG  +TK++LP RP+ RKG  SKR  FVR+++REVAGFAPYE+R+ EL++  +
Sbjct:     4 GLVVGLNKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQ 63

Query:    69 DKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 101
             DKRA K+AK++LGT KRAK K EE+++ ++ SR
Sbjct:    64 DKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96

GO:0002181 "cytoplasmic translation" evidence=NAS

GO:0003735 "structural constituent of ribosome" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006412 "translation" evidence=ISO

GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO

UNIPROTKB|Q9Y3U8 RPL36 "60S ribosomal protein L36" [Homo sapiens (taxid:9606)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 61/105 (58%), Positives = 76/105 (72%)

Query:     1 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
             MA + P   + VGLNKGH VTK    PR + R+G+ +K   FVR +IREV GFAPYE+R 
Sbjct:     1 MALRYP---MAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRA 57

Query:    61 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSN---ALRKSRA 102
              ELLKV KDKRALK  K+++GTH RAK+KREE+SN   A+RK+ A
Sbjct:    58 MELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAAA 102

GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA

GO:0006412 "translation" evidence=NAS;TAS

GO:0003735 "structural constituent of ribosome" evidence=NAS

GO:0005730 "nucleolus" evidence=IDA

GO:0000184 "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006413 "translational initiation" evidence=TAS

GO:0006414 "translational elongation" evidence=TAS

GO:0006415 "translational termination" evidence=TAS

GO:0006614 "SRP-dependent cotranslational protein targeting to membrane" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0016032 "viral reproduction" evidence=TAS

GO:0016070 "RNA metabolic process" evidence=TAS

GO:0016071 "mRNA metabolic process" evidence=TAS

GO:0019058 "viral infectious cycle" evidence=TAS

GO:0019083 "viral transcription" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|F2Z5K6 RPL36 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 61/105 (58%), Positives = 76/105 (72%)

Query:     1 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
             MA + P   + VGLNKGH VTK    PR + R+G+ +K   FVR +IREV GFAPYE+R 
Sbjct:     1 MALRYP---MAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRA 57

Query:    61 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSN---ALRKSRA 102
              ELLKV KDKRALK  K+++GTH RAK+KREE+SN   A+RK+ A
Sbjct:    58 MELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAAA 102

GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

RGD|2322117 LOC100360439 "ribosomal protein L36-like" [Rattus norvegicus (taxid:10116)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 61/105 (58%), Positives = 76/105 (72%)

Query:     1 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
             MA + P   + +GLNKGH VTK    PR + R+G+ +K   FVR +IREV GFAPYE+R 
Sbjct:     1 MALRYP---MAMGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRA 57

Query:    61 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSN---ALRKSRA 102
              ELLKV KDKRALK  K+K+GTH RAK+KREE+SN   A+RK+ A
Sbjct:    58 MELLKVSKDKRALKFIKKKVGTHIRAKRKREELSNVLAAMRKAAA 102

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

UNIPROTKB|Q3T171 RPL36 "60S ribosomal protein L36" [Bos taurus (taxid:9913)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 61/105 (58%), Positives = 76/105 (72%)

Query:     1 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
             MA + P   + VGLNKGH VTK    PR + R+G+ +K   FVR +IREV GFAPYE+R 
Sbjct:     1 MALRYP---MAVGLNKGHKVTKNVGKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRA 57

Query:    61 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSN---ALRKSRA 102
              ELLKV KDKRALK  K+++GTH RAK+KREE+SN   A+RK+ A
Sbjct:    58 MELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAAA 102

GO:0005840 "ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

RGD|2319728 LOC100361644 "ribosomal protein L36-like" [Rattus norvegicus (taxid:10116)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 60/105 (57%), Positives = 76/105 (72%)

Query:     1 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
             MA + P   + VGLNKGH VTK    PR + R+G+ +K   FVR +IREV GFAPY++R 
Sbjct:     1 MALRYP---MAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYQRRA 57

Query:    61 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSN---ALRKSRA 102
              ELLKV KDKRALK  K+++GTH RAK+KREE+SN   A+RK+ A
Sbjct:    58 MELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAAA 102

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6Q415	RL36_DANRE	No assigned EC number	0.6022	0.8	0.8380	yes	no
Q3T171	RL36_BOVIN	No assigned EC number	0.5979	0.8545	0.8952	yes	no
Q92365	RL36A_SCHPO	No assigned EC number	0.5742	0.8727	0.9696	yes	no
Q9Y3U8	RL36_HUMAN	No assigned EC number	0.5979	0.8545	0.8952	yes	no
P39032	RL36_RAT	No assigned EC number	0.5876	0.8545	0.8952	yes	no
Q6DER2	RL36_XENTR	No assigned EC number	0.5979	0.8545	0.8952	yes	no
Q8UW19	RL36_LAPHA	No assigned EC number	0.5979	0.8545	0.8952	N/A	no
O80929	RL361_ARATH	No assigned EC number	0.8080	0.9	0.8761	no	no
P52866	RL36_DAUCA	No assigned EC number	0.8089	0.8090	0.8396	N/A	no
Q24F59	RL36_TETTS	No assigned EC number	0.5555	0.8454	0.8942	N/A	no
Q98TF6	RL36_CHICK	No assigned EC number	0.5876	0.8545	0.8952	yes	no
Q66KU4	RL36_XENLA	No assigned EC number	0.5979	0.8545	0.8952	N/A	no
P49630	RL36_DROME	No assigned EC number	0.5098	0.8363	0.8	yes	no
Q90YT2	RL36_ICTPU	No assigned EC number	0.5773	0.8545	0.8952	N/A	no
Q9LRB8	RL36_ENTCP	No assigned EC number	0.6836	0.8909	0.9702	N/A	no
P47964	RL36_MOUSE	No assigned EC number	0.5670	0.8545	0.8952	yes	no
Q5RAZ9	RL36_PONAB	No assigned EC number	0.5979	0.8545	0.8952	yes	no
O94658	RL36B_SCHPO	No assigned EC number	0.5742	0.8727	0.9696	yes	no
P49181	RL36_CAEEL	No assigned EC number	0.5393	0.8090	0.8557	yes	no
P05745	RL36A_YEAST	No assigned EC number	0.4787	0.8545	0.94	yes	no
Q55AQ9	RL36_DICDI	No assigned EC number	0.4947	0.8454	0.8857	yes	no
Q9LZ57	RL363_ARATH	No assigned EC number	0.8	0.9363	0.9537	no	no
O14455	RL36B_YEAST	No assigned EC number	0.4787	0.8545	0.94	yes	no
Q9HFR7	RL36_TRIHM	No assigned EC number	0.5392	0.9181	0.9619	N/A	no
Q9M352	RL362_ARATH	No assigned EC number	0.7678	1.0	0.9821	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	110
pfam01158	95	pfam01158, Ribosomal_L36e, Ribosomal protein L36e	2e-40
PTZ00196	98	PTZ00196, PTZ00196, 60S ribosomal protein L36; Pro	9e-33
COG5051	97	COG5051, RPL36A, Ribosomal protein L36E [Translati	1e-19

>gnl|CDD|201631 pfam01158, Ribosomal_L36e, Ribosomal protein L36e

 Score =  129 bits (326), Expect = 2e-40
 Identities = 67/93 (72%), Positives = 77/93 (82%)

Query: 9   GLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGK 68
           G+ VGLNKGH VTK+   PRP+ RKGK SKR  FVR +IREVAGFAPYEKR+ ELLKVGK
Sbjct: 1   GIAVGLNKGHKVTKRPRKPRPSRRKGKLSKRTKFVRDIIREVAGFAPYEKRVIELLKVGK 60

Query: 69  DKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 101
           DKRALK AK++LGTH+RAK+KREE+SN L   R
Sbjct: 61  DKRALKFAKKRLGTHRRAKRKREELSNVLAAQR 93

Length = 95

>gnl|CDD|185509 PTZ00196, PTZ00196, 60S ribosomal protein L36; Provisional

 Score =  109 bits (275), Expect = 9e-33
 Identities = 64/97 (65%), Positives = 75/97 (77%)

Query: 6   PNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLK 65
           P TG+ VGLNKGHIVTK+   P P+ RKG  SKR   V+ VIREV GF+PYE+R+ ELLK
Sbjct: 1   PRTGIAVGLNKGHIVTKRARKPSPSKRKGLLSKRKRLVKDVIREVCGFSPYERRMIELLK 60

Query: 66  VGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRA 102
           VGKDKRALK AK++LGTHKRAK KR+E+  ALR  R 
Sbjct: 61  VGKDKRALKYAKKRLGTHKRAKAKRDEIQEALRAQRK 97

Length = 98

>gnl|CDD|227384 COG5051, RPL36A, Ribosomal protein L36E [Translation, ribosomal structure and biogenesis]

 Score = 76.5 bits (188), Expect = 1e-19
 Identities = 49/93 (52%), Positives = 73/93 (78%)

Query: 8   TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 67
            GL VGLNKG  VTK++ P RP+ +KG+ SKR  FVR+++RE+AG +PYE+R+ EL++  
Sbjct: 5   PGLVVGLNKGKKVTKRQPPERPSRKKGQLSKRTEFVRSIVREIAGLSPYERRVIELIRNS 64

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSNALRKS 100
           +DKRA K+AK++LG+ KRAK K EE+++ ++ S
Sbjct: 65  QDKRARKLAKKRLGSLKRAKAKVEELTSVIQSS 97

Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	110
PF01158	98	Ribosomal_L36e: Ribosomal protein L36e; InterPro:	100.0
PTZ00196	98	60S ribosomal protein L36; Provisional	100.0
KOG3452	102	consensus 60S ribosomal protein L36 [Translation,	100.0
COG5051	97	RPL36A Ribosomal protein L36E [Translation, riboso	100.0

>PF01158 Ribosomal_L36e: Ribosomal protein L36e; InterPro: IPR000509 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms

Probab=100.00  E-value=1.9e-55  Score=311.06  Aligned_cols=98  Identities=66%  Similarity=0.979  Sum_probs=84.4

Q ss_pred             CCccceeeecCCceecccCCCCCCCcccCCCCchhHHHHHHHHHhhccchhHHHHHHHHhhcchhHHHHHHHHhhhhhHH
Q 033866            6 PNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKR   85 (110)
Q Consensus         6 ~~~~iavGlnKGhkvtk~~~~~r~s~~kg~~tkr~kfVr~vIrEV~GfAPYErr~mELlk~skdKrAlKf~KKRlGth~R   85 (110)
                      +++||||||||||+||+|+++++||+++|.+|+|++||||||+|||||||||+++||||++|+||+||||+|+|||||+|
T Consensus         1 ~~~~iavGlnkGh~vtk~~~~~r~s~~kg~~tk~~kfvr~vIrEv~GfaPYEkr~mELlkv~kdKrAlKf~KKRlGth~R   80 (98)
T PF01158_consen    1 PRYGIAVGLNKGHKVTKNVSKPRPSRRKGRLTKRTKFVRDVIREVCGFAPYEKRAMELLKVSKDKRALKFAKKRLGTHIR   80 (98)
T ss_dssp             --TTSTTSSS-S-----TTS---STTS-SHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHH
T ss_pred             CCCceeeeCCCCcccCCCCCCCCcccccCccchhHHHHHHHHHHhcCCChHHHHHHHHHhcchhHHHHHHHHHHhhhhHH
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhCC
Q 033866           86 AKKKREEMSNALRKSRAP  103 (110)
Q Consensus        86 AKrK~eel~~vl~~~Rk~  103 (110)
                      ||+|+|||+|||++||++
T Consensus        81 AKrKrEel~~vl~~~rk~   98 (98)
T PF01158_consen   81 AKRKREELSNVLAAMRKA   98 (98)
T ss_dssp             HHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHhcC
Confidence            999999999999999974

The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. A number of eukaryotic ribosomal proteins can be grouped on the basis of sequence similarities. The L36E ribosomal family consists of mammalian, Caenorhabditis elegans and Drosophila L36, Candida albicans L39, and yeast YL39 ribosomal proteins [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 4A1B_Q 4A1D_Q 4A19_Q 4A18_Q 3IZS_k 3IZR_k.

>PTZ00196 60S ribosomal protein L36; Provisional

Probab=100.00  E-value=9.2e-55  Score=307.75  Aligned_cols=98  Identities=65%  Similarity=1.007  Sum_probs=95.7

Q ss_pred             CCccceeeecCCceecccCCCCCCCcccCCCCchhHHHHHHHHHhhccchhHHHHHHHHhhcchhHHHHHHHHhhhhhHH
Q 033866            6 PNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKR   85 (110)
Q Consensus         6 ~~~~iavGlnKGhkvtk~~~~~r~s~~kg~~tkr~kfVr~vIrEV~GfAPYErr~mELlk~skdKrAlKf~KKRlGth~R   85 (110)
                      +++||||||||||+||+++++++||+++|.+|+|++||||||+|||||||||+|+||||++|+|||||||+|+|||||+|
T Consensus         1 ~~~g~avGlnKGh~vtk~~~~~r~s~rkg~~tkr~~fVr~vIrEV~GfaPYErr~mELLkv~kdKrAlKfaKkRlGth~R   80 (98)
T PTZ00196          1 PRTGIAVGLNKGHIVTKRARKPSPSKRKGLLSKRKRLVKDVIREVCGFSPYERRMIELLKVGKDKRALKYAKKRLGTHKR   80 (98)
T ss_pred             CCCceeeecCCCcccCcCCCCCCcccccCCCCchhHHHHHHHHHHhcccHHHHHHHHHHHhcchHHHHHHHHHHhhhHHH
Confidence            36899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhCC
Q 033866           86 AKKKREEMSNALRKSRAP  103 (110)
Q Consensus        86 AKrK~eel~~vl~~~Rk~  103 (110)
                      ||+|+|||++||++||+.
T Consensus        81 aK~Kreel~~vl~~~rkk   98 (98)
T PTZ00196         81 AKAKRDEIQEALRAQRKK   98 (98)
T ss_pred             HHHHHHHHHHHHHHHhcC
Confidence            999999999999999973

>KOG3452 consensus 60S ribosomal protein L36 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2.2e-51  Score=291.49  Aligned_cols=99  Identities=66%  Similarity=0.938  Sum_probs=96.9

Q ss_pred             CccceeeecCCceecccCCCCCCCcccCCCCchhHHHHHHHHHhhccchhHHHHHHHHhhcchhHHHHHHHHhhhhhHHH
Q 033866            7 NTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRA   86 (110)
Q Consensus         7 ~~~iavGlnKGhkvtk~~~~~r~s~~kg~~tkr~kfVr~vIrEV~GfAPYErr~mELlk~skdKrAlKf~KKRlGth~RA   86 (110)
                      .+|++|||||||++|+++++||+|+++|.+|+|++||+|||+|||||||||+++||||++|+||||+||+|+|||||+||
T Consensus         4 ~~~~~vglnkgh~~tk~~~~pr~s~~kg~~sk~tkfvr~lirEv~G~aPyErr~meLlkvskdkrA~K~lKkRlGth~RA   83 (102)
T KOG3452|consen    4 CYGLAVGLNKGHKVTKRVSKPRQSRRKGETSKRTKFVRDLIREVAGFAPYERRAMELLKVSKDKRALKLLKKRLGTHKRA   83 (102)
T ss_pred             ccceeecccccchhhcccCCCCcCccccchhhhHHHHHHHHHHHhCCChHHHHHHHHHHHcccHHHHHHHHHHhhHHHHH
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhCCCC
Q 033866           87 KKKREEMSNALRKSRAPGG  105 (110)
Q Consensus        87 KrK~eel~~vl~~~Rk~~~  105 (110)
                      |+|+|||+|||+++|++++
T Consensus        84 k~KrEELsnvl~~~rk~~~  102 (102)
T KOG3452|consen   84 KRKREELSNVLAAMRKAHA  102 (102)
T ss_pred             HHHHHHHHHHHHHHHhccC
Confidence            9999999999999999764

>COG5051 RPL36A Ribosomal protein L36E [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=9.1e-36  Score=209.40  Aligned_cols=92  Identities=52%  Similarity=0.904  Sum_probs=90.2

Q ss_pred             ccceeeecCCceecccCCCCCCCcccCCCCchhHHHHHHHHHhhccchhHHHHHHHHhhcchhHHHHHHHHhhhhhHHHH
Q 033866            8 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAK   87 (110)
Q Consensus         8 ~~iavGlnKGhkvtk~~~~~r~s~~kg~~tkr~kfVr~vIrEV~GfAPYErr~mELlk~skdKrAlKf~KKRlGth~RAK   87 (110)
                      .|+++|||+|-+||++...+|||+++|.+++|+.||+++++|++||+|||+++||||++|.|++|.|++|||||||+||+
T Consensus         5 ~g~~~glNkgKkvt~r~p~~rps~kkgq~s~Rt~fvrsivrEiaGlsPyErr~i~Lirns~~krArKlakKRLGs~kRAk   84 (97)
T COG5051           5 PGLVVGLNKGKKVTKRQPPERPSRKKGQLSKRTEFVRSIVREIAGLSPYERRVIELIRNSQDKRARKLAKKRLGSLKRAK   84 (97)
T ss_pred             cchhhhhcccceeeeccCCCCcchhhhccccHHHHHHHHHHHHccCCHHHHHHHHHHHhcccHHHHHHHHHHhhhHHHHH
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 033866           88 KKREEMSNALRK   99 (110)
Q Consensus        88 rK~eel~~vl~~   99 (110)
                      .|.|||.++|++
T Consensus        85 aKvEel~~~i~~   96 (97)
T COG5051          85 AKVEELTSVIQS   96 (97)
T ss_pred             HHHHHHHHHHhc
Confidence            999999999975

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	110
3izr_k	112	Localization Of The Large Subunit Ribosomal Protein		1e-47
3izs_k	100	Localization Of The Large Subunit Ribosomal Protein		2e-19
4a18_Q	104	T.Thermophila 60s Ribosomal Subunit In Complex With		8e-19
3zf7_m	109	High-resolution Cryo-electron Microscopy Structure		9e-18

>pdb|3IZR|KK Chain k, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 112

Iteration: 1
 Score =  184 bits (466), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 90/106 (84%), Positives = 99/106 (93%)
Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
           MAP QP +GLFVG+NKGH+VTK+ELPPRP+DRKGK +KRVHFVR +IREVAGFAPYEKRI
Sbjct: 1   MAPSQPKSGLFVGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRI 60
Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGG 106
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+ LRK R+ GGG
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSAGGG 106

>pdb|3IZS|KK Chain k, Localization Of The Large Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 100

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 66/94 (70%)
Query: 8   TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 67
           TG+ +GLNKG  VT     P+ + +KG  S R  FVR+++RE+AG +PYE+R+ +L++  
Sbjct: 5   TGIAIGLNKGKKVTSMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNS 64
Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 101
            +KRA KVAK++LG+  RAK K EEM+N +  SR
Sbjct: 65  GEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 98

>pdb|4A18|Q Chain Q, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 1 Length = 104

Iteration: 1
 Score = 88.6 bits (218), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 68/99 (68%), Gaps = 6/99 (6%)
Query: 9   GLFVGLNKGHIVTK--KELPPRPA-DRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLK 65
           G  VG+NKG I T+  K+L    A  RKGK  KRV  VR VIREV GFAPYEKRI EL+K
Sbjct: 4   GQAVGINKGFITTQLEKKLQKHSAVQRKGKLGKRVALVRQVIREVTGFAPYEKRIIELIK 63
Query: 66  VG--KD-KRALKVAKRKLGTHKRAKKKREEMSNALRKSR 101
            G  KD K+A K+A+++LGTH+RAK K+  +  A+R  R
Sbjct: 64  AGSAKDSKKATKIARKRLGTHRRAKVKKALLEEAVRAQR 102

>pdb|3ZF7|MM Chain m, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 109

Iteration: 1
 Score = 85.1 bits (209), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 63/94 (67%)
Query: 6   PNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLK 65
           P TG+  G NKG+  T++   P   DR     K++  V+ +I ++ GF+P E+R+ ELL+
Sbjct: 11  PRTGIIAGFNKGYKTTRRARRPSSNDRYALPHKKLRAVKAIISDLVGFSPMERRVQELLR 70
Query: 66  VGKDKRALKVAKRKLGTHKRAKKKREEMSNALRK 99
           VGKDKRALK  K++LG+ K AKK+R ++  ALR+
Sbjct: 71  VGKDKRALKFCKKRLGSIKAAKKRRAKVEEALRQ 104

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	110
3iz5_K	206	60S ribosomal protein L13A (L13P); eukaryotic ribo	8e-32
3izc_K	199	60S ribosomal protein RPL16 (L13P); eukaryotic rib	1e-30
4a18_Q	104	RPL36, 60S ribosomal protein L36; ribosome, eukary	2e-25

>4a18_Q RPL36, 60S ribosomal protein L36; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_Q 4a1b_Q 4a1d_Q Length = 104

 Score = 90.8 bits (225), Expect = 2e-25
 Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 6/100 (6%)

Query: 8   TGLFVGLNKGHIVTKKEL---PPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELL 64
            G  VG+NKG I T+ E          RKGK  KRV  VR VIREV GFAPYEKRI EL+
Sbjct: 3   KGQAVGINKGFITTQLEKKLQKHSAVQRKGKLGKRVALVRQVIREVTGFAPYEKRIIELI 62

Query: 65  KVGK---DKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 101
           K G     K+A K+A+++LGTH+RAK K+  +  A+R  R
Sbjct: 63  KAGSAKDSKKATKIARKRLGTHRRAKVKKALLEEAVRAQR 102

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	110
3izc_k	100	60S ribosomal protein RPL36 (L36E); eukaryotic rib	100.0
3iz5_k	112	60S ribosomal protein L36 (L36E); eukaryotic ribos	100.0
4a18_Q	104	RPL36, 60S ribosomal protein L36; ribosome, eukary	100.0

>4a18_Q RPL36, 60S ribosomal protein L36; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_Q 4a1b_Q 4a1d_Q

Probab=100.00  E-value=5.5e-55  Score=310.54  Aligned_cols=96  Identities=54%  Similarity=0.816  Sum_probs=94.5

Q ss_pred             CccceeeecCCceec---ccCCCCCCCcccCCCCchhHHHHHHHHHhhccchhHHHHHHHHhhcc---hhHHHHHHHHhh
Q 033866            7 NTGLFVGLNKGHIVT---KKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGK---DKRALKVAKRKL   80 (110)
Q Consensus         7 ~~~iavGlnKGhkvt---k~~~~~r~s~~kg~~tkr~kfVr~vIrEV~GfAPYErr~mELlk~sk---dKrAlKf~KKRl   80 (110)
                      ++|||||||+||+||   ++++++|||+++|.+|+|++||||||+|||||||||+|+||||++|+   |||||||+|+||
T Consensus         2 ~~~iavGlnKGhkvT~~~k~~~k~r~s~rkg~ltK~tkfVrdiIrEV~GfaPYErR~mELLKvsk~~~dKRAlKf~KKRl   81 (104)
T 4a18_Q            2 AKGQAVGINKGFITTQLEKKLQKHSAVQRKGKLGKRVALVRQVIREVTGFAPYEKRIIELIKAGSAKDSKKATKIARKRL   81 (104)
T ss_dssp             CTTSTTSSSCSCCCCCCCTTTSCCCSTTCCSCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHH
T ss_pred             CCCeeeecCCCcccccccccCCCCCcccccCCCcchHHHHHHHHHHHhcCchhHHHHHHHHHcccchhhHHHHHHHHHHh
Confidence            579999999999999   99999999999999999999999999999999999999999999999   999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHhhC
Q 033866           81 GTHKRAKKKREEMSNALRKSRA  102 (110)
Q Consensus        81 Gth~RAKrK~eel~~vl~~~Rk  102 (110)
                      |||+|||+|+|||+|||++||+
T Consensus        82 Gth~RAKrKreel~~vl~~~Rk  103 (104)
T 4a18_Q           82 GTHRRAKVKKALLEEAVRAQRK  103 (104)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00