Citrus Sinensis ID: 034456

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90----
MAISTVSIHIFGDVPSSPLVGVLQDRVNNWRETALILTAILFPAAAIWFIGIFLHSVDKFSEDNEDKVSRIERSKTTPLLEDEKAETTQACAEP
ccEEEEEEEEEcccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHccccccccccccccccHHHccccc
***STVSIHIFGDVPSSPLVGVLQDRVNNWRETALILTAILFPAAAIWFIGIFLHSVD************************************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAISTVSIHIFGDVPSSPLVGVLQDRVNNWRETALILTAILFPAAAIWFIGIFLHSVDKFSEDNEDKVSRIERSKTTPLLEDEKAETTQACAEP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable sphingolipid transporter spinster homolog 2 Probable sphingolipid transporter that plays a central role in endosomes and/or lysosomes storage.probableQ9FLG8

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1PW4, chain A
Confidence level:probable
Coverage over the Query: 3-50
View the alignment between query and template
View the model in PyMOL