Citrus Sinensis ID: 034522

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90--
Protein Sequence
MLGLALGSKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGVKAYSQIFSRIAFGARRNRYILED
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccEEEEEcHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccEEcccccccHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHEEEccccccccEEEEEccHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
mlglalgskpgmvtTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRsiaasgstkptYLRFLTGVKAYSQIFSRIAfgarrnryiled
Flexible Loop (DISEMBL)
mlglalgskpgmVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIrsiaasgstkptyLRFLTGVKaysqifsriafgarrnryiled
Low Complexity Region (SEG)
MLGLALGSKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGVKAYSQIFSRIAFGARRNRYILED
Disordered region (IsUnstruct)
************VTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGVKAYSQIFSRIAFGARRNRYI***
Disordered Region (DISOPRED)
*******SKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIR***********YLRFLTGVKAYSQIFSRIAFGAR********
Disordered Region (DISEMBL)
MLGLALGSKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGVKAYSQIFSRIAFGARRNRYILED
Disordered Region (DISPRO)
*LGLALGSKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGVKAYSQIFSRIAFGARRN******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLGLALGSKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGVKAYSQIFSRIAFGARRNRYILED
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	92	2.2.26 [Sep-21-2011]
Q8LEU3	348	Chlorophyll(ide) b reduct	yes	no	0.902	0.238	0.807	8e-35
Q84ST4	343	Chlorophyll(ide) b reduct	yes	no	0.902	0.241	0.795	9e-34
Q5N800	504	Probable chlorophyll(ide)	no	no	0.836	0.152	0.317	7e-05
Q93ZA0	496	Probable chlorophyll(ide)	no	no	0.521	0.096	0.428	8e-05

>sp|Q8LEU3|NOL_ARATH Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=2 SV=1

 Score =  145 bits (366), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 67/83 (80%), Positives = 77/83 (92%)

Query: 10  PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
           PGMVTTDLLMSGATTKQAKFFINVLAEPA+VVAE LVP IR+I ASGS KPTY+RFLTG+
Sbjct: 266 PGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRAIPASGSMKPTYIRFLTGI 325

Query: 70  KAYSQIFSRIAFGARRNRYILED 92
           KAY++IFSR+A GAR+NRY+ E+
Sbjct: 326 KAYTKIFSRVALGARKNRYVTEE 348

Required for chlorophyll b degradation. Chlorophyll b, chlorophyllide b, pheophorbide b and pheophytin b can be used as substrates.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 9EC: 4

>sp|Q84ST4|NOL_ORYSJ Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica GN=NOL PE=1 SV=1

 Score =  142 bits (357), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 66/83 (79%), Positives = 76/83 (91%)

Query: 10  PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
           PGMVTTDLLMSGATTKQAKFFIN+LAEPA+VVA+ LVP IR+I  + S KPTY+RFLTG+
Sbjct: 261 PGMVTTDLLMSGATTKQAKFFINILAEPANVVADYLVPNIRAIPTNQSMKPTYIRFLTGL 320

Query: 70  KAYSQIFSRIAFGARRNRYILED 92
           KAYS+IFSRIAFGARRN+Y+ ED
Sbjct: 321 KAYSRIFSRIAFGARRNKYVAED 343

Required for chlorophyll b degradation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q5N800|NYC1_ORYSJ Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1

 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 8/85 (9%)

Query: 8   SKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLT 67
           + PGMV TDLL+SG++ +  + F N++ E  + VA  LVP++R +  SG      + +LT
Sbjct: 367 ASPGMVLTDLLLSGSSLRNKQMF-NLICELPETVARTLVPRMRVVKGSGKA----INYLT 421

Query: 68  GVKAYSQIFSRIAFGARRNRYILED 92
             +    + + +    RR R+  E+
Sbjct: 422 PPRI---LLALVTAWVRRGRWFDEE 443

Required for proper chloroplast degradation. Involved in chlorophyll b degradation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q93ZA0|NYC1_ARATH Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 1/49 (2%)

Query: 8   SKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASG 56
           + PGMV T+LL+SG++ K  + F N++ E  + VA  LVP++R +  SG
Sbjct: 358 ASPGMVLTELLLSGSSIKNKQMF-NIICELPETVARTLVPRMRVVKGSG 405


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.136    0.380 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,874,881
Number of Sequences: 539616
Number of extensions: 951375
Number of successful extensions: 2053
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2049
Number of HSP's gapped (non-prelim): 4
length of query: 92
length of database: 191,569,459
effective HSP length: 62
effective length of query: 30
effective length of database: 158,113,267
effective search space: 4743398010
effective search space used: 4743398010
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)

Involved in chlorophyll b degradation.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	92
225424993	345	PREDICTED: chlorophyll(ide) b reductase	0.902	0.240	0.879	8e-36
356556680	349	PREDICTED: chlorophyll(ide) b reductase	0.902	0.237	0.855	5e-35
449446317	352	PREDICTED: chlorophyll(ide) b reductase	0.902	0.235	0.843	3e-34
18414726	348	chlorophyll(ide) b reductase NOL [Arabid	0.902	0.238	0.807	3e-33
297806477	349	short-chain dehydrogenase/reductase fami	0.902	0.237	0.807	4e-33
154756876	83	short-chain dehydrogenase/reductase fami	0.902	1.0	0.807	5e-33
75298085	343	RecName: Full=Chlorophyll(ide) b reducta	0.902	0.241	0.795	4e-32
345846651	178	chlorophyll(ide) b reductase [Pyrus x br	0.847	0.438	0.858	5e-32
326519666	346	predicted protein [Hordeum vulgare subsp	0.902	0.239	0.795	5e-32
226532277	341	short-chain dehydrogenase/reductase SDR	0.902	0.243	0.771	3e-31

>gi|225424993|ref|XP_002266979.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic [Vitis vinifera] gi|297738201|emb|CBI27402.3| unnamed protein product [Vitis vinifera]

 Score =  154 bits (388), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 73/83 (87%), Positives = 78/83 (93%)

Query: 10  PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
           PGMVTTDLLMSGATTKQAKFFINVLAEPA+VVAE LVP IRSI  +GSTKPTY+RFLTG+
Sbjct: 263 PGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRSIPVNGSTKPTYIRFLTGL 322

Query: 70  KAYSQIFSRIAFGARRNRYILED 92
           KAYSQIFSR AFGARRNRY+LED
Sbjct: 323 KAYSQIFSRFAFGARRNRYLLED 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556680|ref|XP_003546651.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Glycine max]

 Score =  151 bits (382), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 71/83 (85%), Positives = 77/83 (92%)

Query: 10  PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
           PGMVTTDLLMSG  TKQAKFFINVLAEPA+VVAE LVP IRS+ A+GS KPTY+RFLTG+
Sbjct: 267 PGMVTTDLLMSGVNTKQAKFFINVLAEPAEVVAEYLVPNIRSVPANGSMKPTYIRFLTGL 326

Query: 70  KAYSQIFSRIAFGARRNRYILED 92
           KAYSQIFSR+AFGARRNRYILED
Sbjct: 327 KAYSQIFSRLAFGARRNRYILED 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446317|ref|XP_004140918.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Cucumis sativus] gi|449494121|ref|XP_004159455.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Cucumis sativus]

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/83 (84%), Positives = 76/83 (91%)

Query: 10  PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
           PGMVTTDLLMSGA TKQAKFFINVLAEP +VVAE LVP IRSI  +GST+PTY+RFLTG+
Sbjct: 270 PGMVTTDLLMSGADTKQAKFFINVLAEPPEVVAEYLVPNIRSIPTNGSTRPTYIRFLTGL 329

Query: 70  KAYSQIFSRIAFGARRNRYILED 92
           KAYSQIFSR+AFGARRNRY LED
Sbjct: 330 KAYSQIFSRLAFGARRNRYFLED 352

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18414726|ref|NP_568145.1| chlorophyll(ide) b reductase NOL [Arabidopsis thaliana] gi|75301367|sp|Q8LEU3.1|NOL_ARATH RecName: Full=Chlorophyll(ide) b reductase NOL, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1-LIKE; Short=AtNOL; Short=Protein NYC1-LIKE; AltName: Full=Short-chain dehydrogenase/reductase NOL; Flags: Precursor gi|21553369|gb|AAM62462.1| unknown [Arabidopsis thaliana] gi|94442407|gb|ABF18991.1| At5g04900 [Arabidopsis thaliana] gi|134254417|dbj|BAF49742.1| short-chain dehydrogenase/reductase AtNOL1 [Arabidopsis thaliana] gi|332003419|gb|AED90802.1| chlorophyll(ide) b reductase NOL [Arabidopsis thaliana]

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/83 (80%), Positives = 77/83 (92%)

Query: 10  PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
           PGMVTTDLLMSGATTKQAKFFINVLAEPA+VVAE LVP IR+I ASGS KPTY+RFLTG+
Sbjct: 266 PGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRAIPASGSMKPTYIRFLTGI 325

Query: 70  KAYSQIFSRIAFGARRNRYILED 92
           KAY++IFSR+A GAR+NRY+ E+
Sbjct: 326 KAYTKIFSRVALGARKNRYVTEE 348

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806477|ref|XP_002871122.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297316959|gb|EFH47381.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  145 bits (365), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 67/83 (80%), Positives = 77/83 (92%)

Query: 10  PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
           PGMVTTDLLMSGATTKQAKFFINVLAEPA+VVAE LVP IR+I ASGS KPTY+RFLTG+
Sbjct: 267 PGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRAIPASGSMKPTYIRFLTGI 326

Query: 70  KAYSQIFSRIAFGARRNRYILED 92
           KAY++IFSR+A GAR+NRY+ E+
Sbjct: 327 KAYTKIFSRVALGARKNRYVTEE 349

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|154756876|gb|ABS85189.1| short-chain dehydrogenase/reductase family protein, partial [Hypericum perforatum]

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 67/83 (80%), Positives = 78/83 (93%)

Query: 10 PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
          PGMVTTDLLMSGA TKQAKFFINVLAEPADVVAE +VP IRS+ A+GSTKPT +RFLTG+
Sbjct: 1  PGMVTTDLLMSGANTKQAKFFINVLAEPADVVAEYIVPSIRSVPANGSTKPTCIRFLTGI 60

Query: 70 KAYSQIFSRIAFGARRNRYILED 92
          KAY++IFSRIAFGARRNR+++E+
Sbjct: 61 KAYTKIFSRIAFGARRNRFVVEE 83

Source: Hypericum perforatum

Species: Hypericum perforatum

Genus: Hypericum

Family: Hypericaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75298085|sp|Q84ST4.1|NOL_ORYSJ RecName: Full=Chlorophyll(ide) b reductase NOL, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1-LIKE; Short=OsNOL; Short=Protein NYC1-LIKE; AltName: Full=Short-chain dehydrogenase/reductase NOL; Flags: Precursor gi|29244639|gb|AAO73232.1| putative oxidoreductase protein [Oryza sativa Japonica Group] gi|50582763|gb|AAT78833.1| putative short chain dehydrogenase (having alternative splicing products) [Oryza sativa Japonica Group] gi|134254415|dbj|BAF49741.1| short-chain dehydrogenase/reductase NOL1 [Oryza sativa Japonica Group] gi|218193420|gb|EEC75847.1| hypothetical protein OsI_12846 [Oryza sativa Indica Group] gi|222625482|gb|EEE59614.1| hypothetical protein OsJ_11943 [Oryza sativa Japonica Group]

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/83 (79%), Positives = 76/83 (91%)

Query: 10  PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
           PGMVTTDLLMSGATTKQAKFFIN+LAEPA+VVA+ LVP IR+I  + S KPTY+RFLTG+
Sbjct: 261 PGMVTTDLLMSGATTKQAKFFINILAEPANVVADYLVPNIRAIPTNQSMKPTYIRFLTGL 320

Query: 70  KAYSQIFSRIAFGARRNRYILED 92
           KAYS+IFSRIAFGARRN+Y+ ED
Sbjct: 321 KAYSRIFSRIAFGARRNKYVAED 343

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|345846651|gb|AEO19897.1| chlorophyll(ide) b reductase [Pyrus x bretschneideri]

 Score =  141 bits (355), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 67/78 (85%), Positives = 72/78 (92%)

Query: 10  PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
           PGMVTTDLLMSGATTKQAKFFINVLAEP +VVAE LVP IRS+ A+GS KPTY+RFLTG+
Sbjct: 101 PGMVTTDLLMSGATTKQAKFFINVLAEPPEVVAEYLVPNIRSVPANGSMKPTYIRFLTGI 160

Query: 70  KAYSQIFSRIAFGARRNR 87
           KAYSQIFSR AFGARRNR
Sbjct: 161 KAYSQIFSRFAFGARRNR 178

Source: Pyrus x bretschneideri

Species: Pyrus x bretschneideri

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326519666|dbj|BAK00206.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  141 bits (355), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 66/83 (79%), Positives = 74/83 (89%)

Query: 10  PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
           PGMVTTDLLMSGATTKQAKFFIN+LAEP DVVA+ LVP IR I  + S KPTY+RFLTG+
Sbjct: 264 PGMVTTDLLMSGATTKQAKFFINILAEPPDVVADYLVPNIREIPTNQSMKPTYIRFLTGL 323

Query: 70  KAYSQIFSRIAFGARRNRYILED 92
           KAYS+IFSRIAFGARRN+Y+ ED
Sbjct: 324 KAYSRIFSRIAFGARRNKYVAED 346

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226532277|ref|NP_001146883.1| short-chain dehydrogenase/reductase SDR [Zea mays] gi|195604660|gb|ACG24160.1| short-chain dehydrogenase/reductase SDR [Zea mays]

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/83 (77%), Positives = 73/83 (87%)

Query: 10  PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
           PGMVTTDLLMSGATTKQAKFFIN+LAEP DVVA+ LVP +R I    S KPTY+RFLTG+
Sbjct: 259 PGMVTTDLLMSGATTKQAKFFINILAEPPDVVADYLVPNVREIPTKQSMKPTYIRFLTGL 318

Query: 70  KAYSQIFSRIAFGARRNRYILED 92
           KAYS+IFSR+AFGARRN+Y+ ED
Sbjct: 319 KAYSRIFSRLAFGARRNKYVTED 341

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	92
TAIR|locus:2175254	348	NOL "NYC1-like" [Arabidopsis t	0.902	0.238	0.807	7.7e-32
UNIPROTKB|Q84ST4	343	NOL "Chlorophyll(ide) b reduct	0.902	0.241	0.795	5.4e-31
TAIR|locus:2119330	496	NYC1 "NON-YELLOW COLORING 1" [	0.576	0.106	0.436	2.8e-05
UNIPROTKB|Q5N800	504	NYC1 "Probable chlorophyll(ide	0.836	0.152	0.317	2.8e-05

TAIR|locus:2175254 NOL "NYC1-like" [Arabidopsis thaliana (taxid:3702)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 67/83 (80%), Positives = 77/83 (92%)

Query:    10 PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
             PGMVTTDLLMSGATTKQAKFFINVLAEPA+VVAE LVP IR+I ASGS KPTY+RFLTG+
Sbjct:   266 PGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRAIPASGSMKPTYIRFLTGI 325

Query:    70 KAYSQIFSRIAFGARRNRYILED 92
             KAY++IFSR+A GAR+NRY+ E+
Sbjct:   326 KAYTKIFSRVALGARKNRYVTEE 348

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=TAS

GO:0015996 "chlorophyll catabolic process" evidence=IDA

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q84ST4 NOL "Chlorophyll(ide) b reductase NOL, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 66/83 (79%), Positives = 76/83 (91%)

Query:    10 PGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLTGV 69
             PGMVTTDLLMSGATTKQAKFFIN+LAEPA+VVA+ LVP IR+I  + S KPTY+RFLTG+
Sbjct:   261 PGMVTTDLLMSGATTKQAKFFINILAEPANVVADYLVPNIRAIPTNQSMKPTYIRFLTGL 320

Query:    70 KAYSQIFSRIAFGARRNRYILED 92
             KAYS+IFSRIAFGARRN+Y+ ED
Sbjct:   321 KAYSRIFSRIAFGARRNKYVAED 343

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

TAIR|locus:2119330 NYC1 "NON-YELLOW COLORING 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 108 (43.1 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 24/55 (43%), Positives = 36/55 (65%)

Query:     2 LGLALGSKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASG 56
             +GL   S PGMV T+LL+SG++ K  + F N++ E  + VA  LVP++R +  SG
Sbjct:   353 VGLHTAS-PGMVLTELLLSGSSIKNKQMF-NIICELPETVARTLVPRMRVVKGSG 405

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IC

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q5N800 NYC1 "Probable chlorophyll(ide) b reductase NYC1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 108 (43.1 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 27/85 (31%), Positives = 47/85 (55%)

Query:     8 SKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIAASGSTKPTYLRFLT 67
             + PGMV TDLL+SG++ +  + F N++ E  + VA  LVP++R +  SG      + +LT
Sbjct:   367 ASPGMVLTDLLLSGSSLRNKQMF-NLICELPETVARTLVPRMRVVKGSGKA----INYLT 421

Query:    68 GVKAYSQIFSRIAFGARRNRYILED 92
               +    + + +    RR R+  E+
Sbjct:   422 PPRI---LLALVTAWVRRGRWFDEE 443


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.136   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       92        92   0.00091  102 3  11 22  0.44    29
                                                     29  0.40    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  445 (47 KB)
  Total size of DFA:  78 KB (2063 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.03u 0.13s 9.16t   Elapsed:  00:00:01
  Total cpu time:  9.03u 0.13s 9.16t   Elapsed:  00:00:01
  Start:  Thu May  9 18:27:00 2013   End:  Thu May  9 18:27:01 2013

GO:0009536 "plastid" evidence=IDA

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=IDA

GO:0042170 "plastid membrane" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q84ST4	NOL_ORYSJ	1, ., 1, ., 1, ., 2, 9, 4	0.7951	0.9021	0.2419	yes	no
Q8LEU3	NOL_ARATH	1, ., 1, ., 1, ., 2, 9, 4	0.8072	0.9021	0.2385	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00021145001	SubName- Full=Chromosome chr1 scaffold_22, whole genome shotgun sequence; (345 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00038863001	SubName- Full=Chromosome chr8 scaffold_99, whole genome shotgun sequence; (370 aa)				•		•			0.905
	GSVIVG00023780001	SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (319 aa)						•			0.899
	GSVIVG00020049001	SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (322 aa)						•			0.899
	GSVIVG00015396001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (534 aa)						•			0.900
	GSVIVG00037883001	SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (266 aa)			•						0.433
	GSVIVG00024252001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (271 aa)			•						0.421
	GSVIVG00021371001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (180 aa)			•						0.413

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	92
PRK07832	272	short chain dehydrogenase; Provisional	86.88
PRK05599	246	hypothetical protein; Provisional	84.5
PRK12937	245	short chain dehydrogenase; Provisional	81.08
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	80.05

>PRK07832 short chain dehydrogenase; Provisional

Probab=86.88  E-value=2  Score=31.34  Aligned_cols=45  Identities=18%  Similarity=0.246  Sum_probs=28.1

Q ss_pred             cccccchhhhhhhhcCC------ChHHHHHHHHHh---CCChHHHHHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGA------TTKQAKFFINVL---AEPADVVAECLVPKIR   50 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a------~~~~~k~f~NiL---aE~petVA~~LVprI~   50 (92)
                      ..++||.|.|++..+..      ..+....+.+..   .-+||.||+.++--|.
T Consensus       177 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~  230 (272)
T PRK07832        177 SVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVE  230 (272)
T ss_pred             EEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHh
Confidence            45899999999865421      111122222222   2589999999987774

>PRK05599 hypothetical protein; Provisional

Probab=84.50  E-value=2.3  Score=30.77  Aligned_cols=39  Identities=21%  Similarity=0.252  Sum_probs=27.1

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHhCCChHHHHHHHHHHHHhh
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSI   52 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiLaE~petVA~~LVprI~~~   52 (92)
                      ..++||+|.|++.......+        +..+||.||+.++.-+...
T Consensus       176 ~~v~PG~v~T~~~~~~~~~~--------~~~~pe~~a~~~~~~~~~~  214 (246)
T PRK05599        176 IIARPGFVIGSMTTGMKPAP--------MSVYPRDVAAAVVSAITSS  214 (246)
T ss_pred             EEecCCcccchhhcCCCCCC--------CCCCHHHHHHHHHHHHhcC
Confidence            35899999999853211110        1358999999999877764

>PRK12937 short chain dehydrogenase; Provisional

Probab=81.08  E-value=1.8  Score=30.45  Aligned_cols=41  Identities=20%  Similarity=0.373  Sum_probs=24.5

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHhC----CChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVLA----EPADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiLa----E~petVA~~LV   46 (92)
                      ..++||+|.|++.......+....+.+.+.    .+|+.||..++
T Consensus       179 ~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  223 (245)
T PRK12937        179 NAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVA  223 (245)
T ss_pred             EEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            357999999998655444333333433321    26777776643

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=80.05  E-value=1.5  Score=31.57  Aligned_cols=42  Identities=26%  Similarity=0.440  Sum_probs=23.7

Q ss_pred             cccccchhhhhhhhcCCChH---HHH-HHHHH--h--CCChHHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTK---QAK-FFINV--L--AEPADVVAECLVP   47 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~---~~k-~f~Ni--L--aE~petVA~~LVp   47 (92)
                      ..++||+|.|++.......+   +.. .+.+-  +  --+||.||+.++-
T Consensus       178 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  227 (255)
T PRK06463        178 NAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLF  227 (255)
T ss_pred             EEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHH
Confidence            45899999999975432221   111 11111  0  1368888877665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	92
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	84.5
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	83.21
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	81.96
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	81.54
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	81.15
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	80.53
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	80.4

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=84.50  E-value=0.28  Score=35.17  Aligned_cols=46  Identities=22%  Similarity=0.177  Sum_probs=23.7

Q ss_pred             cccccchhhhhhhhcCCCh---HHHHHHHHHhCCChHHHHHHHHHHHHh
Q 034522            6 LGSKPGMVTTDLLMSGATT---KQAKFFINVLAEPADVVAECLVPKIRS   51 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~---~~~k~f~NiLaE~petVA~~LVprI~~   51 (92)
                      ..++||.|.|++.......   ...+.....++.+||.+|..++-=...
T Consensus       193 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~  241 (291)
T 3rd5_A          193 LAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQ  241 (291)
T ss_dssp             EEECCSGGGSCC--------------------CHHHHHHHHHHHHHHHS
T ss_pred             EEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHcC
Confidence            4689999999997653221   112234455677899999887765554

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=83.21  E-value=0.82  Score=31.49  Aligned_cols=41  Identities=17%  Similarity=0.225  Sum_probs=25.6

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHhC-----CChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVLA-----EPADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiLa-----E~petVA~~LV   46 (92)
                      ..++||.|.|++.......+..+.++.-..     -+||.||+.++
T Consensus       187 ~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  232 (255)
T 3icc_A          187 NAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAA  232 (255)
T ss_dssp             EEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHH
T ss_pred             EEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHH
Confidence            468999999998766544333333332221     26888888655

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=81.96  E-value=0.45  Score=34.10  Aligned_cols=41  Identities=20%  Similarity=0.338  Sum_probs=18.0

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHhC----CChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVLA----EPADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiLa----E~petVA~~LV   46 (92)
                      ..++||.|.|++.......+..+.+.....    -+||.||+.++
T Consensus       201 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  245 (267)
T 3u5t_A          201 NAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVA  245 (267)
T ss_dssp             EEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHH
T ss_pred             EEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            468999999999765443322233322111    25888887665

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=81.54  E-value=0.58  Score=34.93  Aligned_cols=40  Identities=30%  Similarity=0.213  Sum_probs=18.7

Q ss_pred             cccccchhhhhhhhcCCC--hHHHHHHHHHhC--------CChHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGAT--TKQAKFFINVLA--------EPADVVAECL   45 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~--~~~~k~f~NiLa--------E~petVA~~L   45 (92)
                      ..++||.|.||++..-..  +.+.+.+++.+.        -+||.||...
T Consensus       199 N~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v  248 (273)
T 4fgs_A          199 NTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAA  248 (273)
T ss_dssp             EEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             EEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            468999999998766432  223333444332        1567777643

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=81.15  E-value=0.73  Score=31.55  Aligned_cols=43  Identities=14%  Similarity=0.108  Sum_probs=24.8

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHhC--------CChHHHHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVLA--------EPADVVAECLVPKI   49 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiLa--------E~petVA~~LVprI   49 (92)
                      ..++||.|.|++...-... ....++..+.        -+||.||+.++-=+
T Consensus       154 n~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~  204 (223)
T 3uce_A          154 NAISPGLTKTEAYKGMNAD-DRDAMYQRTQSHLPVGKVGEASDIAMAYLFAI  204 (223)
T ss_dssp             EEEEECSBCSGGGTTSCHH-HHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHH
T ss_pred             EEEEeCCCcchhhhhcchh-hHHHHHHHHhhcCCCCCccCHHHHHHHHHHHc
Confidence            4689999999987543322 2222222111        26888887665433

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=80.53  E-value=0.77  Score=32.11  Aligned_cols=41  Identities=20%  Similarity=0.174  Sum_probs=23.7

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHhCC-----ChHHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVLAE-----PADVVAECLVP   47 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiLaE-----~petVA~~LVp   47 (92)
                      ..++||+|.|++...- .....+.+...+.-     +||.||+.++=
T Consensus       189 n~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~r~~~p~dva~~v~~  234 (257)
T 3tl3_A          189 MTIAPGLFDTPLLASL-PEEARASLGKQVPHPSRLGNPDEYGALAVH  234 (257)
T ss_dssp             EEEEECSBCCTTC----CHHHHHHHHHTSSSSCSCBCHHHHHHHHHH
T ss_pred             EEEEecCccChhhhhc-cHHHHHHHHhcCCCCCCccCHHHHHHHHHH
Confidence            4689999999987543 22233333333322     68888876654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=80.40  E-value=0.66  Score=32.93  Aligned_cols=42  Identities=14%  Similarity=0.164  Sum_probs=22.1

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHh----CCChHHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVL----AEPADVVAECLVP   47 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiL----aE~petVA~~LVp   47 (92)
                      ..++||.|.|++.......+....+....    .-+||.||+.++-
T Consensus       187 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~  232 (262)
T 3ksu_A          187 NAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKF  232 (262)
T ss_dssp             EEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHHHH
T ss_pred             EEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHH
Confidence            46899999999986643322222221111    1378888876554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	92
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	94.95
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	92.68
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	91.6
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	91.25
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	90.26
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	88.77
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	88.74
d2bnma1	71	Hydroxypropylphosphonic acid epoxidase Fom4, N-ter	86.16
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	85.94
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	85.87
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	84.49
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	84.39
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	84.38
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	84.11
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	83.8
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	83.72
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	83.3
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	82.74
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	82.68
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	82.65
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	82.44
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	82.2
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	81.45
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	81.18
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	80.3
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	80.22
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	80.16

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.95  E-value=0.015  Score=41.21  Aligned_cols=63  Identities=19%  Similarity=0.184  Sum_probs=33.7

Q ss_pred             cccccchhhhhhhhcCCC----------hHHHHHHHH----------HhCCChHHHHHHHHHHHHhhhccCCCCCceeEe
Q 034522            6 LGSKPGMVTTDLLMSGAT----------TKQAKFFIN----------VLAEPADVVAECLVPKIRSIAASGSTKPTYLRF   65 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~----------~~~~k~f~N----------iLaE~petVA~~LVprI~~~~~~g~~~~~~I~~   65 (92)
                      ..++||+|.|+++..-..          ....+++..          --.-+||.||+.++.-+.+.    +.   .++|
T Consensus       181 n~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~----~p---~~ry  253 (285)
T d1jtva_         181 SLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAP----KP---TLRY  253 (285)
T ss_dssp             EEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCS----SC---CSEE
T ss_pred             EEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCC----CC---CeEE
Confidence            468999999998754321          112222322          23458999999877654332    22   3789


Q ss_pred             echHHHHHHH
Q 034522           66 LTGVKAYSQI   75 (92)
Q Consensus        66 LTp~ka~~k~   75 (92)
                      +|+...+.-+
T Consensus       254 ~~g~~~~~~~  263 (285)
T d1jtva_         254 FTTERFLPLL  263 (285)
T ss_dssp             ESCSTTHHHH
T ss_pred             ecHHHHHHHH
Confidence            9987544433

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=92.68  E-value=0.04  Score=37.91  Aligned_cols=40  Identities=15%  Similarity=0.111  Sum_probs=26.4

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHhCC----ChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVLAE----PADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiLaE----~petVA~~LV   46 (92)
                      ..++||+|.||++. +.+++..+++.+-..-    +||.||+.++
T Consensus       174 N~I~PG~v~T~~~~-~~~~~~~~~~~~~~p~~r~~~p~dva~~v~  217 (241)
T d2a4ka1         174 NVLLPGLIQTPMTA-GLPPWAWEQEVGASPLGRAGRPEEVAQAAL  217 (241)
T ss_dssp             EEEEECSBCCGGGT-TSCHHHHHHHHHTSTTCSCBCHHHHHHHHH
T ss_pred             eeeccCcCCCHHHH-hhhHhHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence            46899999999874 3344455666554332    6788777654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.60  E-value=0.025  Score=39.24  Aligned_cols=43  Identities=14%  Similarity=0.139  Sum_probs=31.0

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHhCCChHHHHHHHHHHHHhhh
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSIA   53 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiLaE~petVA~~LVprI~~~~   53 (92)
                      ..++||.|.||+.......     .......+||.||+.++..+...+
T Consensus       191 ~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~e~~a~~i~~~~~~~~  233 (269)
T d1xu9a_         191 TLCVLGLIDTETAMKAVSG-----IVHMQAAPKEECALEIIKGGALRQ  233 (269)
T ss_dssp             EEEEECCBCCHHHHHHSCG-----GGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred             EEEecCcCCCcHHHHhccC-----CccccCCCHHHHHHHHHHHhhcCC
Confidence            4689999999997654433     123346889999999988765543

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=91.25  E-value=0.038  Score=38.41  Aligned_cols=51  Identities=16%  Similarity=0.294  Sum_probs=33.8

Q ss_pred             cccccchhhhhhhhcCCCh-----HHHHHHHHHhCCChHHHHHHHHHHHHhhhccCC
Q 034522            6 LGSKPGMVTTDLLMSGATT-----KQAKFFINVLAEPADVVAECLVPKIRSIAASGS   57 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~-----~~~k~f~NiLaE~petVA~~LVprI~~~~~~g~   57 (92)
                      ..++||.|.||+.-.-...     ...+.....-.++||+||+.++--+.+. .+|.
T Consensus       177 n~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~~-~tG~  232 (254)
T d1sbya1         177 YSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEAN-KNGA  232 (254)
T ss_dssp             EEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHHC-CTTC
T ss_pred             EEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhCC-CCCC
Confidence            4689999999987543221     1233344455779999999998666443 4664

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.26  E-value=0.1  Score=36.11  Aligned_cols=41  Identities=22%  Similarity=0.249  Sum_probs=27.3

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHhC----CChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVLA----EPADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiLa----E~petVA~~LV   46 (92)
                      ..|+||.|.||++....+++..+.+.+-..    -+||.||+..+
T Consensus       185 N~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~  229 (255)
T d1fmca_         185 NGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAAL  229 (255)
T ss_dssp             EEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHH
T ss_pred             EEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            468999999999887666544454443211    15788887544

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.77  E-value=0.13  Score=35.02  Aligned_cols=44  Identities=14%  Similarity=0.121  Sum_probs=26.9

Q ss_pred             cccccchhhhhhhhcC----CChHHHHHHHHH--h--CCChHHHHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSG----ATTKQAKFFINV--L--AEPADVVAECLVPKI   49 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~----a~~~~~k~f~Ni--L--aE~petVA~~LVprI   49 (92)
                      ..++||.|.|++....    .+++..++|-..  +  -.+||.||+.++-=+
T Consensus       193 n~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll  244 (259)
T d1oaaa_         193 LSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLL  244 (259)
T ss_dssp             EEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHH
T ss_pred             EEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            4689999999986542    222223333222  2  147889998887544

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=88.74  E-value=0.07  Score=37.02  Aligned_cols=41  Identities=22%  Similarity=0.266  Sum_probs=23.7

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHhC--------CChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVLA--------EPADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiLa--------E~petVA~~LV   46 (92)
                      ..|+||.|.||+.-.....+..+..++-+.        -+||.||+..+
T Consensus       184 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~  232 (259)
T d2ae2a_         184 NGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVA  232 (259)
T ss_dssp             EEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHH
T ss_pred             EEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            468999999999765443322222222211        14777876543

>d2bnma1 a.35.1.3 (A:6-76) Hydroxypropylphosphonic acid epoxidase Fom4, N-terminal domain {Streptomyces wedmorensis [TaxId: 43759]}

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: SinR domain-like
domain: Hydroxypropylphosphonic acid epoxidase Fom4, N-terminal domain
species: Streptomyces wedmorensis [TaxId: 43759]

Probab=86.16  E-value=0.16  Score=30.66  Aligned_cols=15  Identities=27%  Similarity=0.443  Sum_probs=14.1

Q ss_pred             HHHHhCCChHHHHHH
Q 034522           30 FINVLAEPADVVAEC   44 (92)
Q Consensus        30 f~NiLaE~petVA~~   44 (92)
                      +-.+|+|.||+||+|
T Consensus        24 las~lgetpetvaaw   38 (71)
T d2bnma1          24 LASLLGETPETVAAW   38 (71)
T ss_dssp             HHHHHTCCHHHHHHH
T ss_pred             HHHHHcCCchHHHHh
Confidence            678999999999998

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=85.94  E-value=0.087  Score=36.25  Aligned_cols=40  Identities=15%  Similarity=0.096  Sum_probs=13.7

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHh---C--CChHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVL---A--EPADVVAECL   45 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiL---a--E~petVA~~L   45 (92)
                      ..|+||+|.|++.-.....+..+...+.+   .  -+||.||+..
T Consensus       178 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v  222 (247)
T d2ew8a1         178 NAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAA  222 (247)
T ss_dssp             EEEEECCC------------------CTTSSSCSCCCTHHHHHHH
T ss_pred             EEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHH
Confidence            46899999999976554432222222211   1  1577777644

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=85.87  E-value=0.14  Score=35.40  Aligned_cols=17  Identities=29%  Similarity=0.345  Sum_probs=14.0

Q ss_pred             cccccchhhhhhhhcCC
Q 034522            6 LGSKPGMVTTDLLMSGA   22 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a   22 (92)
                      ..|+||+|.||+.....
T Consensus       187 N~I~PG~i~T~~~~~~~  203 (272)
T d1xkqa_         187 NSVSPGMVETGFTNAMG  203 (272)
T ss_dssp             EEEEECCBCSSHHHHTT
T ss_pred             EEEeeCCCcchhhhccC
Confidence            46899999999987654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=84.49  E-value=0.21  Score=34.22  Aligned_cols=39  Identities=18%  Similarity=0.213  Sum_probs=24.4

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHhC----CChHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVLA----EPADVVAECL   45 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiLa----E~petVA~~L   45 (92)
                      ..++||.|.||+...-.. ++.+.+.+-+.    -+||.||+..
T Consensus       176 N~I~PG~i~T~~~~~~~~-~~~~~~~~~~pl~R~~~pedvA~~v  218 (243)
T d1q7ba_         176 NVVAPGFIETDMTRALSD-DQRAGILAQVPAGRLGGAQEIANAV  218 (243)
T ss_dssp             EEEEECSBCCHHHHTSCH-HHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             EEEecceEechhhhhhhh-hHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            468999999998765443 34444433221    1588888753

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=84.39  E-value=0.13  Score=35.55  Aligned_cols=41  Identities=20%  Similarity=0.263  Sum_probs=18.0

Q ss_pred             cccccchhhhhhhhcCCC-----hHHHHHHHHHh----CCChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGAT-----TKQAKFFINVL----AEPADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~-----~~~~k~f~NiL----aE~petVA~~LV   46 (92)
                      ..|+||.|.||+..+...     .+..+.+....    -=+||.||+..+
T Consensus       182 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~  231 (258)
T d1ae1a_         182 NSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIA  231 (258)
T ss_dssp             EEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHH
T ss_pred             EEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            468999999998755432     12233332211    127888887443

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.38  E-value=0.13  Score=35.64  Aligned_cols=40  Identities=15%  Similarity=0.168  Sum_probs=14.6

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHH-----HHhCCChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFI-----NVLAEPADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~-----NiLaE~petVA~~LV   46 (92)
                      ..++||.|.||+......++..+.+.     .-++ +||.||+..+
T Consensus       184 N~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~-~pedvA~~v~  228 (259)
T d1xq1a_         184 NAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFG-EPEEVSSLVA  228 (259)
T ss_dssp             EEEECCSCC-------------------------C-CGGGGHHHHH
T ss_pred             EEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCc-CHHHHHHHHH
Confidence            46899999999876544332222222     2233 4677776544

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=84.11  E-value=0.14  Score=35.21  Aligned_cols=40  Identities=18%  Similarity=0.117  Sum_probs=24.1

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHH-----HhCCChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFIN-----VLAEPADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~N-----iLaE~petVA~~LV   46 (92)
                      ..|+||.|.||+.-.-...++.+...+     -++ +||.||+..+
T Consensus       183 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~-~pedvA~~v~  227 (251)
T d1zk4a1         183 NTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIG-EPNDIAYICV  227 (251)
T ss_dssp             EEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCB-CHHHHHHHHH
T ss_pred             EEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCc-CHHHHHHHHH
Confidence            468999999999876554433322211     122 5777777543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=83.80  E-value=0.25  Score=32.30  Aligned_cols=38  Identities=18%  Similarity=0.207  Sum_probs=23.7

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHH------hCCChHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINV------LAEPADVVAECL   45 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~Ni------LaE~petVA~~L   45 (92)
                      ..++||.|.|++....... ..+.+..-      ++ +||.||+.+
T Consensus       173 N~V~PG~i~T~~~~~~~~~-~~~~~~~~~~~~~R~g-~pedvA~~v  216 (241)
T d1uaya_         173 VTVAPGLFDTPLLQGLPEK-AKASLAAQVPFPPRLG-RPEEYAALV  216 (241)
T ss_dssp             EEEEECSCSSHHHHTSCHH-HHHHHHTTCCSSCSCC-CHHHHHHHH
T ss_pred             eeecCCcccccccchhhhh-HHHHHHhcCCCCCCCc-CHHHHHHHH
Confidence            4689999999998765543 33322221      22 578887743

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=83.72  E-value=0.24  Score=33.47  Aligned_cols=36  Identities=22%  Similarity=0.246  Sum_probs=18.3

Q ss_pred             ccccccchhhhhhhhcCCChHHHHHHHHHhCCChHHHHHHHHHHHHhh
Q 034522            5 ALGSKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPKIRSI   52 (92)
Q Consensus         5 ~~~LSPGMV~TdLL~~~a~~~~~k~f~NiLaE~petVA~~LVprI~~~   52 (92)
                      ...++||.|.|||--...            +.+||.+|+.++..+...
T Consensus       197 v~~i~PG~v~T~m~~~~~------------~~~~e~~a~~~~~~~~~~  232 (250)
T d1yo6a1         197 VVNFCPGWVQTNLGGKNA------------ALTVEQSTAELISSFNKL  232 (250)
T ss_dssp             EEEEECCCC-------------------------HHHHHHHHHHHTTC
T ss_pred             EEEEecCCCCCCCCCCCC------------CCCHHHHHHHHHHHHhcC
Confidence            356899999999843221            246888888888887543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=83.30  E-value=0.28  Score=33.55  Aligned_cols=40  Identities=18%  Similarity=0.075  Sum_probs=24.3

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHhC----CChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVLA----EPADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiLa----E~petVA~~LV   46 (92)
                      ..++||+|.|++.... +++..+++.+-..    -+||.||+.++
T Consensus       174 N~I~PG~v~T~~~~~~-~~~~~~~~~~~~pl~R~~~pedia~~v~  217 (242)
T d1ulsa_         174 NTLAPGFIETRMTAKV-PEKVREKAIAATPLGRAGKPLEVAYAAL  217 (242)
T ss_dssp             EEEEECSBCCTTTSSS-CHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             EEEeeCcccChhhhcC-CHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            4689999999987543 3333444443321    15788876543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=82.74  E-value=0.2  Score=34.36  Aligned_cols=39  Identities=18%  Similarity=0.246  Sum_probs=20.0

Q ss_pred             ccccccchhhhhhhhcCCChHHHHHHHHH-----hCCChHHHHHHH
Q 034522            5 ALGSKPGMVTTDLLMSGATTKQAKFFINV-----LAEPADVVAECL   45 (92)
Q Consensus         5 ~~~LSPGMV~TdLL~~~a~~~~~k~f~Ni-----LaE~petVA~~L   45 (92)
                      ...|+||+|.|++.-... ++..+.+.+-     ++ +||.||+..
T Consensus       184 VN~V~PG~v~T~~~~~~~-~~~~~~~~~~~pl~R~~-~pedvA~~v  227 (251)
T d2c07a1         184 VNAIAPGFISSDMTDKIS-EQIKKNIISNIPAGRMG-TPEEVANLA  227 (251)
T ss_dssp             EEEEEECSBCC-----CC-HHHHHHHHTTCTTSSCB-CHHHHHHHH
T ss_pred             EEEEccCCEecccccccC-HHHHHHHHhcCCCCCCc-CHHHHHHHH
Confidence            356899999999875543 3333444332     22 477777643

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=82.68  E-value=0.53  Score=31.28  Aligned_cols=40  Identities=13%  Similarity=-0.068  Sum_probs=24.2

Q ss_pred             cccccchhhhhhhhcCCCh-HHHHHHHHHh----CCChHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATT-KQAKFFINVL----AEPADVVAECL   45 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~-~~~k~f~NiL----aE~petVA~~L   45 (92)
                      -.|+||+|.|++....... +..+.+.+..    -=+||.||...
T Consensus       184 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v  228 (258)
T d1qsga_         184 NAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSA  228 (258)
T ss_dssp             EEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             ecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            4689999999987654433 2333333331    12578888644

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.65  E-value=0.32  Score=33.16  Aligned_cols=41  Identities=17%  Similarity=0.255  Sum_probs=25.9

Q ss_pred             cccccchhhhhhhhcCCCh-HHHHHHHHHhC----CChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATT-KQAKFFINVLA----EPADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~-~~~k~f~NiLa----E~petVA~~LV   46 (92)
                      ..++||.|.|++......+ +..+.+.+-+-    -+||.||+..+
T Consensus       175 N~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~  220 (244)
T d1pr9a_         175 NAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAIL  220 (244)
T ss_dssp             EEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred             EEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            4689999999998765543 33444443321    24788887544

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=82.44  E-value=0.38  Score=33.24  Aligned_cols=40  Identities=20%  Similarity=0.257  Sum_probs=24.6

Q ss_pred             cccccchhhhhhhhcCCCh----HHHHHHHHHhCC--------ChHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATT----KQAKFFINVLAE--------PADVVAECL   45 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~----~~~k~f~NiLaE--------~petVA~~L   45 (92)
                      ..++||.|.||+.......    ++.+.++.-..+        +||.||+..
T Consensus       184 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v  235 (274)
T d1xhla_         184 NSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANII  235 (274)
T ss_dssp             EEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH
T ss_pred             eeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHH
Confidence            4689999999998765432    223334433222        578888743

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=82.20  E-value=0.12  Score=35.41  Aligned_cols=37  Identities=19%  Similarity=0.176  Sum_probs=24.4

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHhCCChHHHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLVPK   48 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiLaE~petVA~~LVpr   48 (92)
                      ..++||.|.||+.-.-....+ +    .+ -+||.||+.++-=
T Consensus       183 n~i~PG~v~T~~~~~~~~~~~-~----~~-~~PedvA~~v~~l  219 (240)
T d2bd0a1         183 TDVQPGAVYTPMWGKVDDEMQ-A----LM-MMPEDIAAPVVQA  219 (240)
T ss_dssp             EEEEECCBCSTTTCCCCSTTG-G----GS-BCHHHHHHHHHHH
T ss_pred             EEeeeCcccCchhhhcCHhhH-h----cC-CCHHHHHHHHHHH
Confidence            468999999998754333211 1    12 3689998877653

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=81.45  E-value=0.2  Score=34.42  Aligned_cols=16  Identities=25%  Similarity=0.275  Sum_probs=10.8

Q ss_pred             cccccchhhhhhhhcC
Q 034522            6 LGSKPGMVTTDLLMSG   21 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~   21 (92)
                      ..++||.|.||+....
T Consensus       187 N~V~PG~v~T~~~~~~  202 (264)
T d1spxa_         187 NSISPGLVATGFGSAM  202 (264)
T ss_dssp             EEEEECCBCCCC----
T ss_pred             EEEeeCCCCCcchhcc
Confidence            4689999999987654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.18  E-value=0.41  Score=32.17  Aligned_cols=17  Identities=41%  Similarity=0.481  Sum_probs=13.4

Q ss_pred             cccccchhhhhhhhcCC
Q 034522            6 LGSKPGMVTTDLLMSGA   22 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a   22 (92)
                      ..++||.|.||+.-...
T Consensus       196 n~v~PG~v~T~m~~~~~  212 (248)
T d1snya_         196 VSLHPGWVKTDMGGSSA  212 (248)
T ss_dssp             EEECCCSBCSTTTCTTC
T ss_pred             EEcCCCcccCCcccccC
Confidence            46899999999865443

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.30  E-value=0.22  Score=34.23  Aligned_cols=40  Identities=10%  Similarity=0.116  Sum_probs=24.8

Q ss_pred             cccccchhhhhhhhcCCC-hHHHHHHHHH-----hCCChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGAT-TKQAKFFINV-----LAEPADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~-~~~~k~f~Ni-----LaE~petVA~~LV   46 (92)
                      ..++||+|.||+...... .+..+.+.+-     ++ +||.||+..+
T Consensus       182 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~-~pedvA~~v~  227 (251)
T d1vl8a_         182 NVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTG-VPEDLKGVAV  227 (251)
T ss_dssp             EEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCB-CGGGGHHHHH
T ss_pred             EEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCC-CHHHHHHHHH
Confidence            468999999998765432 2334444433     22 5777777554

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=80.22  E-value=0.34  Score=33.10  Aligned_cols=40  Identities=15%  Similarity=0.191  Sum_probs=23.7

Q ss_pred             cccccchhhhhhhhcCCChHHHHHHHHHh----CCChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGATTKQAKFFINVL----AEPADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a~~~~~k~f~NiL----aE~petVA~~LV   46 (92)
                      ..++||.|.||+...-. ++..+++.+-.    --+||.||+.++
T Consensus       177 N~I~PG~i~T~~~~~~~-~~~~~~~~~~~pl~R~~~p~dvA~~v~  220 (244)
T d1edoa_         177 NVVCPGFIASDMTAKLG-EDMEKKILGTIPLGRTGQPENVAGLVE  220 (244)
T ss_dssp             EEEEECSBCSHHHHTTC-HHHHHHHHTSCTTCSCBCHHHHHHHHH
T ss_pred             EEEecceeccHHHHHhh-HHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            46899999999876543 22333333221    125777777544

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=80.16  E-value=0.51  Score=32.29  Aligned_cols=41  Identities=20%  Similarity=0.159  Sum_probs=24.7

Q ss_pred             cccccchhhhhhhhcCC--ChHHHHHHHHHhC------CChHHHHHHHH
Q 034522            6 LGSKPGMVTTDLLMSGA--TTKQAKFFINVLA------EPADVVAECLV   46 (92)
Q Consensus         6 ~~LSPGMV~TdLL~~~a--~~~~~k~f~NiLa------E~petVA~~LV   46 (92)
                      ..|+||.|.|++...-.  ..++.+.+.....      -+||.||+..+
T Consensus       183 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~  231 (268)
T d2bgka1         183 NCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVA  231 (268)
T ss_dssp             EEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHH
T ss_pred             EecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHH
Confidence            46899999999876543  3333333333211      25788887544