Citrus Sinensis ID: 034639

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------
Protein Sequence
MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFWEEEKPAPAESDSKPTDAVAAA
Secondary Structure (PSIPRED)
ccEEEEEEEEEccHHHHHHHHHHHcccccEEEEEEEccccEEEEEEEccHHHHHHHHHHHcccEEEcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEEcccHHHHHHHHHHHHccccEEEEEEccccEEEEEEEccHHHHHHHHHHcccccEEccccccccHHHccccccHHccc
Coil and Loop (DISEMBL)
MSQTVVLKVGMSCEGCVGAVKRVLgkmdgvetfdidlkEQKVTvkgnvqpgavLQTVSKTgkktafweeekpapaesdskptdavaaa
Flexible Loop (DISEMBL)
msqtvvlkvgmscegcVGAVKRVLGKMDGVETFDidlkeqkvtvkgnvqpgavlqtvsktgkktafweeekpapaesdskptdavaaa
Low Complexity Region (SEG)
MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFWEEEKPAPAESDSKPTDAVAAA
Disordered region (IsUnstruct)
****VVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTV*******************************
Disordered Region (DISOPRED)
*SQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTA***********************
Disordered Region (DISEMBL)
MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVS******************************
Disordered Region (DISPRO)
*SQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK**************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFWEEEKPAPAESDSKPTDAVAAA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	88	2.2.26 [Sep-21-2011]
Q9TT99	68	Copper transport protein	yes	no	0.681	0.882	0.459	5e-08
Q9SZN7	153	Heavy metal-associated is	no	no	0.738	0.424	0.454	2e-07
Q9XT28	68	Copper transport protein	N/A	no	0.681	0.882	0.442	2e-07
Q3T0E0	68	Copper transport protein	yes	no	0.681	0.882	0.442	2e-07
O08997	68	Copper transport protein	yes	no	0.681	0.882	0.442	2e-07
Q6BK66	250	Superoxide dismutase 1 co	no	no	0.659	0.232	0.379	8e-07
Q9WUC4	68	Copper transport protein	yes	no	0.681	0.882	0.426	2e-06
O00244	68	Copper transport protein	yes	no	0.681	0.882	0.409	1e-05
Q6BZU2	234	Superoxide dismutase 1 co	no	no	0.704	0.264	0.338	0.0001
Q54PZ2	67	Copper transport protein	yes	no	0.704	0.925	0.4	0.0001

>sp|Q9TT99|ATOX1_CANFA Copper transport protein ATOX1 OS=Canis familiaris GN=ATOX1 PE=3 SV=1

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 7  LKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAF 66
            V M+CEGC  AV RVL K+ GVE FDIDL  +KV +        +L+T+ KTGK  ++
Sbjct: 6  FSVDMTCEGCSNAVSRVLNKLGGVE-FDIDLPNKKVCINSEHSVDILLETLEKTGKAVSY 64

Query: 67 W 67
           
Sbjct: 65 L 65

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.
Canis familiaris (taxid: 9615)

>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 3  QTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVS-KTG 61
          QTV +KV M CEGC   V+R +  M GV +  ++ K  KVTV G V P  V+  +S +TG
Sbjct: 26 QTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTG 85

Query: 62 KKTAFW 67
          KK   W
Sbjct: 86 KKVELW 91

Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9XT28|ATOX1_SHEEP Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 7  LKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAF 66
            V M+CEGC  AV RVL K+ GV+ FDIDL  +KV +        +L+T+ KTGK  ++
Sbjct: 6  FSVDMTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVDTLLETLGKTGKAVSY 64

Query: 67 W 67
           
Sbjct: 65 L 65

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.

Ovis aries (taxid: 9940)

>sp|Q3T0E0|ATOX1_BOVIN Copper transport protein ATOX1 OS=Bos taurus GN=ATOX1 PE=3 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 7  LKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAF 66
            V M+CEGC  AV RVL K+ GV+ FDIDL  +KV +        +L+T+ KTGK  ++
Sbjct: 6  FSVDMTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVDTLLETLGKTGKAVSY 64

Query: 67 W 67
           
Sbjct: 65 L 65

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.

Bos taurus (taxid: 9913)

>sp|O08997|ATOX1_MOUSE Copper transport protein ATOX1 OS=Mus musculus GN=Atox1 PE=2 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 7  LKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAF 66
            V M+CEGC  AV RVL K+ GVE F+IDL  +KV +        +L T++KTGK  ++
Sbjct: 6  FSVDMTCEGCAEAVSRVLNKLGGVE-FNIDLPNKKVCIDSEHSSDTLLATLNKTGKAVSY 64

Query: 67 W 67
           
Sbjct: 65 L 65

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.

Mus musculus (taxid: 10090)

>sp|Q6BK66|CCS1_DEBHA Superoxide dismutase 1 copper chaperone OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CCS1 PE=3 SV=2

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 5  VVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
          +V  V M C+ CV +V   L  ++G+  +DIDLK   VT +G+V P  +++ +  TGK
Sbjct: 7  IVFAVPMECQSCVDSVSSSLKSLNGISKYDIDLKSNLVTTEGSVPPSEIVKAIQSTGK 64

Copper chaperone for superoxide dismutase 1 (SOD1). Binds copper ions and delivers them specifically to SOD1.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

>sp|Q9WUC4|ATOX1_RAT Copper transport protein ATOX1 OS=Rattus norvegicus GN=Atox1 PE=1 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 7  LKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAF 66
            V M+C GC  AV RVL K+ GVE F+IDL  +KV ++       +L T++KTGK  ++
Sbjct: 6  FSVDMTCGGCAEAVSRVLNKLGGVE-FNIDLPNKKVCIESEHSSDILLATLNKTGKAVSY 64

Query: 67 W 67
           
Sbjct: 65 L 65

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.

Rattus norvegicus (taxid: 10116)

>sp|O00244|ATOX1_HUMAN Copper transport protein ATOX1 OS=Homo sapiens GN=ATOX1 PE=1 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 7  LKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAF 66
            V M+C GC  AV RVL K+ GV+ +DIDL  +KV ++       +L T+ KTGK  ++
Sbjct: 6  FSVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSY 64

Query: 67 W 67
           
Sbjct: 65 L 65

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.

Homo sapiens (taxid: 9606)

>sp|Q6BZU2|CCS1_YARLI Superoxide dismutase 1 copper chaperone OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CCS1 PE=3 SV=1

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60
          MS T    V + CE C  +VK+ L  + G+E+ D  L +Q ++V G   P  +++ V   
Sbjct: 1  MSFTTTFAVPLECESCCDSVKQALANVQGIESVDCKLVDQLISVTGTSAPSQIVKAVQNI 60

Query: 61 GK 62
          GK
Sbjct: 61 GK 62

Copper chaperone for superoxide dismutase 1 (SOD1). Binds copper ions and delivers them specifically to SOD1.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|Q54PZ2|ATOX1_DICDI Copper transport protein ATOX1 homolog OS=Dictyostelium discoideum GN=atox1 PE=3 SV=2

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 4  TVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGA--VLQTVSKTG 61
          T    V M+C GC  AV  +L K+DGV    IDL+ +KV+ + + + GA  +L+ + KTG
Sbjct: 2  TYSFFVDMTCGGCSKAVNAILSKIDGVSNIQIDLENKKVSCESS-KMGADELLKNIQKTG 60

Query: 62 KKTAF 66
          KK + 
Sbjct: 61 KKCSI 65

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	88
119367485	88	putative copper chaperone [Citrus hybrid	1.0	1.0	1.0	2e-42
290886187	86	copper transport protein ATOX1 [Hevea br	0.977	1.0	0.818	3e-32
47176684	85	copper chaperone [Populus alba x Populus	0.965	1.0	0.829	3e-32
257219554	93	copper chaperone [Jatropha curcas]	1.0	0.946	0.774	5e-32
224110212	72	predicted protein [Populus trichocarpa]	0.806	0.986	0.915	3e-29
225449673	86	PREDICTED: copper transport protein ATOX	0.977	1.0	0.784	3e-29
350538525	81	copper chaperone [Solanum lycopersicum]	0.897	0.975	0.835	1e-28
18408466	106	homolog of anti-oxidant 1 [Arabidopsis t	0.795	0.660	0.857	2e-28
326523151	130	predicted protein [Hordeum vulgare subsp	0.795	0.538	0.857	4e-28
356535571	81	PREDICTED: copper transport protein ATOX	0.795	0.864	0.885	4e-28

>gi|119367485|gb|ABL67657.1| putative copper chaperone [Citrus hybrid cultivar]

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 88/88 (100%), Positives = 88/88 (100%)

Query: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60
          MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60

Query: 61 GKKTAFWEEEKPAPAESDSKPTDAVAAA 88
          GKKTAFWEEEKPAPAESDSKPTDAVAAA
Sbjct: 61 GKKTAFWEEEKPAPAESDSKPTDAVAAA 88

Source: Citrus hybrid cultivar

Species: Citrus hybrid cultivar

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|290886187|gb|ADD69807.1| copper transport protein ATOX1 [Hevea brasiliensis]

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/88 (81%), Positives = 78/88 (88%), Gaps = 2/88 (2%)

Query: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60
          MSQTVVLKVGMSCEGCVGAVKRVLGKM+GVE++DIDLKEQKVTVKGNVQP AVLQTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPEAVLQTVSKT 60

Query: 61 GKKTAFWEEEKPAPAESDSKPTDAVAAA 88
          GKKT FWE E  APAE ++KP + V  A
Sbjct: 61 GKKTTFWEAE--APAEPETKPAETVTVA 86

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|47176684|gb|AAT12488.1| copper chaperone [Populus alba x Populus tremula var. glandulosa] gi|118484492|gb|ABK94121.1| unknown [Populus trichocarpa] gi|118485074|gb|ABK94400.1| unknown [Populus trichocarpa] gi|118487941|gb|ABK95792.1| unknown [Populus trichocarpa] gi|118488816|gb|ABK96218.1| unknown [Populus trichocarpa x Populus deltoides] gi|118489538|gb|ABK96571.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/88 (82%), Positives = 78/88 (88%), Gaps = 3/88 (3%)

Query: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60
          MSQTVVLKVGMSCEGCVGAVKRVLGKM+GVE++DIDLKEQKVTVKGNVQP AVLQTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKT 60

Query: 61 GKKTAFWEEEKPAPAESDSKPTDAVAAA 88
          GKKTAFWE E PA     +KP + VAAA
Sbjct: 61 GKKTAFWEAEAPA---EPAKPAETVAAA 85

Source: Populus alba x Populus tremula var. glandulosa

Species: Populus alba x Populus glandulosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|257219554|gb|ACV50430.1| copper chaperone [Jatropha curcas]

 Score =  141 bits (355), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 72/93 (77%), Positives = 80/93 (86%), Gaps = 5/93 (5%)

Query: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60
          MSQTVVLKVGMSC+GCVGAVKRVLGKM+GVE++DIDL+EQKVTVKGNVQP AVLQTVSKT
Sbjct: 1  MSQTVVLKVGMSCQGCVGAVKRVLGKMEGVESYDIDLQEQKVTVKGNVQPEAVLQTVSKT 60

Query: 61 GKKTAFWEEEKPA-----PAESDSKPTDAVAAA 88
          GKKT FWE E PA     PAE+ S+P + VA A
Sbjct: 61 GKKTEFWEAEAPAAPETKPAETVSEPAETVAVA 93

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110212|ref|XP_002315448.1| predicted protein [Populus trichocarpa] gi|222864488|gb|EEF01619.1| predicted protein [Populus trichocarpa]

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/71 (91%), Positives = 68/71 (95%)

Query: 3  QTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
          QTVVLKVGMSCEGCVGAVKRVLGKM+GVE++DIDLKEQKVTVKGNVQP AVLQTVSKTGK
Sbjct: 1  QTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGK 60

Query: 63 KTAFWEEEKPA 73
          KTAFWE E PA
Sbjct: 61 KTAFWEAEAPA 71

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449673|ref|XP_002264332.1| PREDICTED: copper transport protein ATOX1 [Vitis vinifera] gi|296090431|emb|CBI40250.3| unnamed protein product [Vitis vinifera]

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/88 (78%), Positives = 76/88 (86%), Gaps = 2/88 (2%)

Query: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60
          M+QTVVLKVGMSCEGCVGAVKRVLGKM+GVE+FDIDLKEQKVTVKGNVQP AVL+TVSKT
Sbjct: 1  MAQTVVLKVGMSCEGCVGAVKRVLGKMEGVESFDIDLKEQKVTVKGNVQPDAVLKTVSKT 60

Query: 61 GKKTAFWEEEKPAPAESDSKPTDAVAAA 88
          GKKT+FWE E  A AE  +K  + V  A
Sbjct: 61 GKKTSFWEAE--ASAEPGAKAAETVPVA 86

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350538525|ref|NP_001234347.1| copper chaperone [Solanum lycopersicum] gi|30039180|gb|AAP06757.1| copper chaperone [Solanum lycopersicum] gi|170773918|gb|ACB32235.1| copper chaperone [Solanum chacoense]

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/79 (83%), Positives = 71/79 (89%)

Query: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60
          MSQTVVLKVGMSCEGCVGAVKRVLGKM+GVETFDIDLKEQKVTVKGNVQP AVL+TVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVETFDIDLKEQKVTVKGNVQPDAVLKTVSKT 60

Query: 61 GKKTAFWEEEKPAPAESDS 79
          GK T+FWE  + A  E+ S
Sbjct: 61 GKPTSFWEAGESAQTEAVS 79

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18408466|ref|NP_564870.1| homolog of anti-oxidant 1 [Arabidopsis thaliana] gi|14532548|gb|AAK64002.1| At1g66240/T6J19_6 [Arabidopsis thaliana] gi|18655401|gb|AAL76156.1| At1g66240/T6J19_6 [Arabidopsis thaliana] gi|332196360|gb|AEE34481.1| homolog of anti-oxidant 1 [Arabidopsis thaliana]

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/70 (85%), Positives = 67/70 (95%)

Query: 1   MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60
           MSQTVVL+V M+CEGCVGAVKRVLGKM+GVE+FD+D+KEQKVTVKGNVQP AVLQTV+KT
Sbjct: 31  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 90

Query: 61  GKKTAFWEEE 70
           GKKTAFWE E
Sbjct: 91  GKKTAFWEAE 100

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326523151|dbj|BAJ88616.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 60/70 (85%), Positives = 66/70 (94%)

Query: 1   MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60
           MSQTV L+VGMSCEGCVGAVKRVLGKM+GVE+FD+D+KEQKVTVKGNV P AVLQTVSKT
Sbjct: 52  MSQTVELRVGMSCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVTPDAVLQTVSKT 111

Query: 61  GKKTAFWEEE 70
           GKKT+FWE E
Sbjct: 112 GKKTSFWEAE 121

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535571|ref|XP_003536318.1| PREDICTED: copper transport protein ATOX1-like [Glycine max]

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/70 (88%), Positives = 65/70 (92%)

Query: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60
          MSQTVVLKVGMSCEGCVGAVKRVLGK+DGVE++DIDLKEQKV VKGNVQP  VLQTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKLDGVESYDIDLKEQKVVVKGNVQPDTVLQTVSKT 60

Query: 61 GKKTAFWEEE 70
          GKKT FWE E
Sbjct: 61 GKKTTFWEGE 70

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	88
TAIR|locus:2205288	106	ATX1 "homolog of anti-oxidant	0.795	0.660	0.857	1.5e-28
TAIR|locus:2078461	121	CCH "copper chaperone" [Arabid	0.909	0.661	0.756	3.9e-28
TAIR|locus:2157457	149	HIPP21 "heavy metal associated	0.738	0.436	0.446	3.9e-12
TAIR|locus:2180265	352	AT5G27690 [Arabidopsis thalian	0.727	0.181	0.468	4.3e-12
TAIR|locus:2049731	259	NAKR2 "AT2G37390" [Arabidopsis	0.886	0.301	0.412	1.3e-11
TAIR|locus:2181718	319	NAKR1 "SODIUM POTASSIUM ROOT D	0.75	0.206	0.477	1.9e-11
TAIR|locus:2135277	158	AT4G39700 [Arabidopsis thalian	0.738	0.411	0.476	3.5e-11
TAIR|locus:2026336	152	HIPP20 "heavy metal associated	0.738	0.427	0.446	4.5e-11
TAIR|locus:2179604	587	AT5G19090 [Arabidopsis thalian	0.897	0.134	0.405	9.1e-11
TAIR|locus:2202265	159	AT1G06330 "AT1G06330" [Arabido	0.75	0.415	0.439	9.4e-11

TAIR|locus:2205288 ATX1 "homolog of anti-oxidant 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 60/70 (85%), Positives = 67/70 (95%)

Query:     1 MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60
             MSQTVVL+V M+CEGCVGAVKRVLGKM+GVE+FD+D+KEQKVTVKGNVQP AVLQTV+KT
Sbjct:    31 MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 90

Query:    61 GKKTAFWEEE 70
             GKKTAFWE E
Sbjct:    91 GKKTAFWEAE 100

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0000785 "chromatin" evidence=IDA

TAIR|locus:2078461 CCH "copper chaperone" [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 62/82 (75%), Positives = 71/82 (86%)

Query:     1 MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60
             M+QTVVLKVGMSC+GCVGAV RVLGKM+GVE+FDID+KEQKVTVKGNV+P AV QTVSKT
Sbjct:     1 MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query:    61 GKKTAFW--EEEKPAPAESDSK 80
             GKKT++W  E E    AE+D K
Sbjct:    61 GKKTSYWPVEAEAEPKAEADPK 82

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0009507 "chloroplast" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

GO:0000302 "response to reactive oxygen species" evidence=IGI

GO:0006827 "high-affinity iron ion transport" evidence=IGI

GO:0006878 "cellular copper ion homeostasis" evidence=IMP;TAS

GO:0007568 "aging" evidence=IEP

GO:0016531 "copper chaperone activity" evidence=ISS

TAIR|locus:2157457 HIPP21 "heavy metal associated isoprenylated plant protein 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 29/65 (44%), Positives = 44/65 (67%)

Query:     3 QTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
             QTV +KV M C+GC   V+ V+ +M GV++ +++ K+ ++TV G+V P  VL+ V  TGK
Sbjct:    26 QTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTGK 85

Query:    63 KTAFW 67
             K  FW
Sbjct:    86 KAEFW 90

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;IGI

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2180265 AT5G27690 [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 4.3e-12, P = 4.3e-12
 Identities = 30/64 (46%), Positives = 45/64 (70%)

Query:     4 TVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKK 63
             T VL+V + CEGC   +K++L K+DGV T +ID+K+QKVTV GNV+P  +++ + K G+ 
Sbjct:    31 TWVLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRH 90

Query:    64 TAFW 67
                W
Sbjct:    91 AELW 94

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2049731 NAKR2 "AT2G37390" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 33/80 (41%), Positives = 45/80 (56%)

Query:     3 QTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
             Q VVLKV + C GC G V++ L +M GV +F+ID   +KVTV G++ P  +L ++SK  K
Sbjct:   181 QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKV-K 239

Query:    63 KTAFWEEEK-PAPAESDSKP 81
                FW     P P      P
Sbjct:   240 NAQFWTNPTIPKPNVETQNP 259

GO:0005575 "cellular_component" evidence=ND

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2181718 NAKR1 "SODIUM POTASSIUM ROOT DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 32/67 (47%), Positives = 44/67 (65%)

Query:     3 QTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
             Q VVL+V + C+GC G VK+ L K+ GV +++ID   +KVTV G+V P  VL ++SK  K
Sbjct:   250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKV-K 308

Query:    63 KTAFWEE 69
                FW E
Sbjct:   309 NAQFWPE 315

GO:0009507 "chloroplast" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009908 "flower development" evidence=IMP

GO:0010015 "root morphogenesis" evidence=IMP

GO:0010233 "phloem transport" evidence=IMP

GO:0055078 "sodium ion homeostasis" evidence=IMP

TAIR|locus:2135277 AT4G39700 [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 31/65 (47%), Positives = 39/65 (60%)

Query:     3 QTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
             QTV LKV M C+GCV  +K  L  + GV+T +I+ K+QKVTV G      VL+    TGK
Sbjct:    32 QTVELKVRMDCDGCVLKIKNSLSSLKGVKTVEINKKQQKVTVSGYADASKVLKKAKATGK 91

Query:    63 KTAFW 67
             K   W
Sbjct:    92 KAEIW 96

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2026336 HIPP20 "heavy metal associated isoprenylated plant protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 29/65 (44%), Positives = 41/65 (63%)

Query:     3 QTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
             QTV +KV M C+GC   VK  +  M GV++ +++ K  KVTV G V+P  VL+ + +TGK
Sbjct:    28 QTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERTGK 87

Query:    63 KTAFW 67
             K   W
Sbjct:    88 KAEIW 92

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2179604 AT5G19090 [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 9.1e-11, P = 9.1e-11
 Identities = 32/79 (40%), Positives = 47/79 (59%)

Query:     3 QTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
             QT VLKV + C+GC   VK++L K++GV T  ID +  KVTV GNV P  +++ + K+GK
Sbjct:    10 QTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGK 69

Query:    63 KTAFWEEEKPAPAESDSKP 81
                 W   K     + ++P
Sbjct:    70 HAEIWGAPKGGSNNNQNQP 88

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2202265 AT1G06330 "AT1G06330" [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 29/66 (43%), Positives = 40/66 (60%)

Query:     3 QTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
             QT+ ++V M C GC   VK  L KM GV+  +ID+ +QKVTV G      VL+ V KTG+
Sbjct:    11 QTIEMRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTGR 70

Query:    63 KTAFWE 68
             +   W+
Sbjct:    71 RAELWQ 76

GO:0005507 "copper ion binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.X.3496.1 SubName- Full=Putative uncharacterized protein; (72 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	88
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	2e-14
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	3e-11
PRK10671	834	PRK10671, copA, copper exporting ATPase; Provision	3e-08
COG2608	71	COG2608, CopZ, Copper chaperone [Inorganic ion tra	2e-07
PLN02957	238	PLN02957, PLN02957, copper, zinc superoxide dismut	5e-07
PRK10671	834	PRK10671, copA, copper exporting ATPase; Provision	8e-07
TIGR00003	66	TIGR00003, TIGR00003, copper ion binding protein	3e-04
COG2217	713	COG2217, ZntA, Cation transport ATPase [Inorganic	0.004

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 61.5 bits (150), Expect = 2e-14
 Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 10 GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN--VQPGAVLQTVSKTGKK 63
          GM+C GCV  +++ L K+ GVE+ ++DL+  K TV+ +  V P  +L+ +   G K
Sbjct: 6  GMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIEDAGYK 61

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 53.4 bits (129), Expect = 3e-11
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 5  VVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN---VQPGAVLQTVSKTG 61
           +   GM+C GC   V++ L K+ GV +  +DL+  KVTV G+   ++   + + + K G
Sbjct: 1  TLRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKAG 60

Query: 62 KK 63
           +
Sbjct: 61 YE 62

Length = 62

>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional

 Score = 48.6 bits (116), Expect = 3e-08
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 1  MSQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSK 59
          MSQT+ L + G+SC  CV  VK  L +   VE  D+ + E  VT  G     A+++T+ +
Sbjct: 1  MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVT--GTASAEALIETIKQ 58

Query: 60 TGKKTAFWEEEKPAPAESDSKPTDAVAAA 88
           G   +     K  P    S P++A+ AA
Sbjct: 59 AGYDASV-SHPKAKPLTESSIPSEALTAA 86

Length = 834

>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]

 Score = 43.9 bits (104), Expect = 2e-07
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
          M +T +   GM+C  CV  V++ L ++DGV + D+DL++   TV 
Sbjct: 1  MMKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVT 45

Length = 71

>gnl|CDD|215516 PLN02957, PLN02957, copper, zinc superoxide dismutase

 Score = 44.7 bits (106), Expect = 5e-07
 Identities = 23/55 (41%), Positives = 33/55 (60%)

Query: 9  VGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKK 63
          V M CEGCV AVK  L  ++GV+  ++DL  Q V V G+    A+   + +TG+K
Sbjct: 12 VDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRK 66

Length = 238

>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional

 Score = 44.3 bits (105), Expect = 8e-07
 Identities = 19/52 (36%), Positives = 27/52 (51%)

Query: 10  GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTG 61
           GMSC  CV  V+  L  + GV    ++L E+   V G+  P  ++Q V K G
Sbjct: 107 GMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAG 158

Length = 834

>gnl|CDD|188014 TIGR00003, TIGR00003, copper ion binding protein

 Score = 35.2 bits (81), Expect = 3e-04
 Identities = 13/36 (36%), Positives = 25/36 (69%)

Query: 10 GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
          GMSC  CV  +++ +G+++GV    + L+++KV V+
Sbjct: 8  GMSCNHCVDKIEKFVGEIEGVSKVKVQLEKEKVVVE 43

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases [Transport and binding proteins, Cations and iron carrying compounds]. Length = 66

>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]

 Score = 34.1 bits (79), Expect = 0.004
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 11/95 (11%)

Query: 3  QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQ----PGAVLQTV 57
          +   L V GM+C  C   ++  L K+ GVE   ++L  ++ TV  + +    P  ++  V
Sbjct: 2  RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAV 60

Query: 58 SKTG-----KKTAFWEEEKPAPAESDSKPTDAVAA 87
           K G             E  A    +      +A 
Sbjct: 61 EKAGYSARLTAALADPAEAEARLLRELLRRLIIAG 95

Length = 713

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	88
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.35
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.3
KOG4656	247	consensus Copper chaperone for superoxide dismutas	98.52
PRK10671	834	copA copper exporting ATPase; Provisional	98.49
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	98.38
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.16
PLN02957	238	copper, zinc superoxide dismutase	98.08
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.63
TIGR00003	68	copper ion binding protein. This model describes a	97.57
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.18
PRK10671	834	copA copper exporting ATPase; Provisional	97.01
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.0

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.35  E-value=3.8e-11  Score=54.26  Aligned_cols=58  Identities=34%  Similarity=0.705  Sum_probs=52.0

Q ss_pred             EEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEee---CCHHHHHHHHHhcCCc
Q 034639            6 VLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN---VQPGAVLQTVSKTGKK   63 (88)
Q Consensus         6 ~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~i~~~i~~~g~~   63 (88)
                      .|.+ ||.|.+|...+++.|.+++|+..+.+++..+++.+...   ...+.+...+...||.
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCcC
Confidence            3788 99999999999999999999999999999999998832   4569999999999984

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.30  E-value=1.5e-10  Score=53.67  Aligned_cols=62  Identities=35%  Similarity=0.675  Sum_probs=55.2

Q ss_pred             EEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE--e-eCCHHHHHHHHHhcCCcee
Q 034639            4 TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK--G-NVQPGAVLQTVSKTGKKTA   65 (88)
Q Consensus         4 ~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~-~~~~~~i~~~i~~~g~~~~   65 (88)
                      +..|.+ ||+|.+|...+.+.|..+.|+..+.+++..+...+.  . ....+.+...+..+||...
T Consensus         3 ~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~   68 (71)
T COG2608           3 KTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVE   68 (71)
T ss_pred             eEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCee
Confidence            467899 999999999999999999999999999999777666  3 5789999999999999764

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=98.52  E-value=2.2e-06  Score=46.90  Aligned_cols=64  Identities=33%  Similarity=0.633  Sum_probs=57.0

Q ss_pred             EEEEEecccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCceeee
Q 034639            4 TVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         4 ~~~~~~g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      +.+|.+.|.|..|.+.++..|..++|+..+++++..+.+.+.....+.++...++..|..+...
T Consensus         8 ~~efaV~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~s~i~~~le~tGr~Avl~   71 (247)
T KOG4656|consen    8 EAEFAVQMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPPSEIQNTLENTGRDAVLR   71 (247)
T ss_pred             eEEEEEechhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCChHHHHHHHHhhChheEEe
Confidence            3567779999999999999999999999999999999998887778899999999998877654

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.49  E-value=1.7e-06  Score=56.23  Aligned_cols=65  Identities=32%  Similarity=0.552  Sum_probs=55.5

Q ss_pred             CceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCceeee
Q 034639            1 MSQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         1 ~~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      |+++..+.+ ||+|.+|...+++.+.+++|+..+.+++.  +..+....+.+.+...+...||.....
T Consensus         1 ~~~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~~~~~i~~~i~~~Gy~~~~~   66 (834)
T PRK10671          1 MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTASAEALIETIKQAGYDASVS   66 (834)
T ss_pred             CCeEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecCCHHHHHHHHHhcCCccccc
Confidence            788899999 99999999999999999999999999984  344444457788999999999987653

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=98.38  E-value=1.4e-05  Score=37.21  Aligned_cols=58  Identities=66%  Similarity=1.004  Sum_probs=51.4

Q ss_pred             EEEEEecccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcC
Q 034639            4 TVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTG   61 (88)
Q Consensus         4 ~~~~~~g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g   61 (88)
                      ...+.+.|+|..|...+.+.+..+.|+....++...+.+.+.+..++..+...+.+.+
T Consensus         6 ~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p~~vl~~l~k~~   63 (73)
T KOG1603|consen    6 TVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDPVKLLKKLKKTG   63 (73)
T ss_pred             EEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEecCHHHHHHHHHhcC
Confidence            3455568999999999999999999999999999999998887789999999988766

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.16  E-value=2.2e-05  Score=50.37  Aligned_cols=63  Identities=30%  Similarity=0.628  Sum_probs=53.8

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE-e--eCC-HHHHHHHHHhcCCceee
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK-G--NVQ-PGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~--~~~-~~~i~~~i~~~g~~~~~   66 (88)
                      .+..|.+ ||+|..|.+.++ .+++++|+....+++......+. .  ... ...+...+...||....
T Consensus         2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy~~~~   69 (713)
T COG2217           2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGYSARL   69 (713)
T ss_pred             ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcCccccc
Confidence            3567899 999999999999 99999999999999999999877 2  233 67889999999997653

>PLN02957 copper, zinc superoxide dismutase

Probab=98.08  E-value=0.00027  Score=40.01  Aligned_cols=65  Identities=35%  Similarity=0.596  Sum_probs=53.8

Q ss_pred             EEEEEecccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCceeeec
Q 034639            4 TVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFWE   68 (88)
Q Consensus         4 ~~~~~~g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~~~~   68 (88)
                      ++.+.++|.|..|...++..+..+.++....+++....+.+........+...+...||...+..
T Consensus         7 ~~~~~VgMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~   71 (238)
T PLN02957          7 LTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKARLIG   71 (238)
T ss_pred             EEEEEECccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCCHHHHHHHHHHcCCcEEEec
Confidence            45555699999999999999999999999999999988777654567778888999999876543

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.63  E-value=0.00042  Score=45.52  Aligned_cols=64  Identities=25%  Similarity=0.603  Sum_probs=56.9

Q ss_pred             EEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCceeee
Q 034639            4 TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         4 ~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      +..|.+ ||.|..|...++..+.++.|+...++++...++.+.   ....+.++.+.+...|+.....
T Consensus       147 ~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~~~~~~~  214 (951)
T KOG0207|consen  147 KIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETGFEASVR  214 (951)
T ss_pred             cEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHHhhcccceee
Confidence            567889 999999999999999999999999999999998876   4588999999999999976543

>TIGR00003 copper ion binding protein

Probab=97.57  E-value=0.001  Score=28.71  Aligned_cols=59  Identities=20%  Similarity=0.532  Sum_probs=43.9

Q ss_pred             EEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEe---eCCHHHHHHHHHhcCCc
Q 034639            5 VVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKG---NVQPGAVLQTVSKTGKK   63 (88)
Q Consensus         5 ~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~~~i~~~i~~~g~~   63 (88)
                      ..+.+ ++.|..|...++..+....++....+++......+..   ......+...+...|+.
T Consensus         4 ~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   66 (68)
T TIGR00003         4 FTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILDAGYE   66 (68)
T ss_pred             EEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence            56889 9999999999999998888888888888887766652   23455555555555553

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.18  E-value=0.0036  Score=41.46  Aligned_cols=62  Identities=29%  Similarity=0.568  Sum_probs=54.1

Q ss_pred             EEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCceeee
Q 034639            6 VLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         6 ~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      .+++ ||.|..|...+++.+++++|+....+.+....+.+.   .....+.+...+.+.|+.....
T Consensus        72 ~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~~~~~e~ie~~gf~a~~i  137 (951)
T KOG0207|consen   72 YLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSPDSIAESIEDLGFSAELI  137 (951)
T ss_pred             EEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCchhHHHHHHhcCccceeh
Confidence            4788 999999999999999999999999999988888766   4578888888899999987654

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.01  E-value=0.0096  Score=39.49  Aligned_cols=61  Identities=33%  Similarity=0.571  Sum_probs=49.3

Q ss_pred             EEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCcee
Q 034639            5 VVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTA   65 (88)
Q Consensus         5 ~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~   65 (88)
                      ..+.+ ||+|..|...+++.+...+|+....+++......+........+...+...||...
T Consensus       101 ~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~~~Gy~a~  162 (834)
T PRK10671        101 QQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAE  162 (834)
T ss_pred             EEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHHhcCCCcc
Confidence            45789 99999999999999999999999999988877666533456667777788888653

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.00  E-value=0.011  Score=38.76  Aligned_cols=62  Identities=26%  Similarity=0.422  Sum_probs=47.7

Q ss_pred             EEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE-eeCCHHHHHHHHHhcCCcee
Q 034639            4 TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK-GNVQPGAVLQTVSKTGKKTA   65 (88)
Q Consensus         4 ~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~i~~~i~~~g~~~~   65 (88)
                      +..+.+ ||+|..|...++..+...+|+....+++...+..+. .......+...+...||...
T Consensus        54 r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~~~I~~aI~~~Gy~a~  117 (741)
T PRK11033         54 RYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAGFSLR  117 (741)
T ss_pred             eEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccchHHHHHHHHhcccccc
Confidence            456889 999999999999999999999999999888876665 22122555666777777643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	88
3cjk_A	68	Crystal Structure Of The Adduct Hah1-Cd(Ii)-Mnk1 Le		8e-07
1fe4_A	68	Crystal Structure Of Mercury-Hah1 Length = 68		8e-07
1jk9_B	249	Heterodimer Between H48f-Ysod1 And Yccs Length = 24		2e-05
2roe_A	66	Solution Structure Of Thermus Thermophilus Hb8 Ttha		5e-05
1fd8_A	73	Solution Structure Of The Cu(I) Form Of The Yeast M		1e-04
1cc7_A	73	Crystal Structure Of The Atx1 Metallochaperone Prot		1e-04
1qup_A	222	Crystal Structure Of The Copper Chaperone For Super		2e-04

>pdb|3CJK|A Chain A, Crystal Structure Of The Adduct Hah1-Cd(Ii)-Mnk1 Length = 68

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 7  LKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAF 66
            V M+C GC  AV RVL K+ GV+ +DIDL  +KV ++       +L T+ KTGK  ++
Sbjct: 5  FSVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSY 63
Query: 67 W 67
Sbjct: 64 L 64

>pdb|1FE4|A Chain A, Crystal Structure Of Mercury-Hah1 Length = 68

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 7  LKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAF 66
            V M+C GC  AV RVL K+ GV+ +DIDL  +KV ++       +L T+ KTGK  ++
Sbjct: 6  FSVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSY 64
Query: 67 W 67
Sbjct: 65 L 65

>pdb|1JK9|B Chain B, Heterodimer Between H48f-Ysod1 And Yccs Length = 249

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 9  VGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
          + M CE CV  +K  L  + G+ + + D+++Q ++V+ +V P  ++ T+   GK
Sbjct: 13 IPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGK 66

>pdb|2ROE|A Chain A, Solution Structure Of Thermus Thermophilus Hb8 Ttha1718 Protein In Vitro Length = 66

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 7  LKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKK 63
          LKV GM+C  CV AV + L K+ GVE  ++ L++ +  V+G   P A++Q V + G K
Sbjct: 4  LKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYK 61

>pdb|1FD8|A Chain A, Solution Structure Of The Cu(I) Form Of The Yeast Metallochaperone, Atx1 Length = 73

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 7  LKVGMSCEGCVGAVKRVLGKMD-GVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
            V M+C GC GAV +VL K++  V   DI L++Q V V   +    +L+ + KTGK
Sbjct: 9  FNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGK 65

>pdb|1CC7|A Chain A, Crystal Structure Of The Atx1 Metallochaperone Protein Length = 73

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 7  LKVGMSCEGCVGAVKRVLGKMD-GVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
            V M+C GC GAV +VL K++  V   DI L++Q V V   +    +L+ + KTGK
Sbjct: 9  FNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGK 65

>pdb|1QUP|A Chain A, Crystal Structure Of The Copper Chaperone For Superoxide Dismutase Length = 222

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 13 CEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
          CE CV  +K  L  + G+ + + D+++Q  +V+ +V P  ++ T+   GK
Sbjct: 16 CENCVNDIKACLKNVPGINSLNFDIEQQIXSVESSVAPSTIINTLRNCGK 65

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	88
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	8e-23
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	2e-21
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	3e-21
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	5e-21
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	1e-19
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	5e-11
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	6e-11
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	8e-11
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	2e-10
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	2e-10
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	1e-09
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	1e-09
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	2e-09
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	2e-09
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	3e-09
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	3e-09
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	3e-09
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	4e-09
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	5e-09
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	6e-09
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	2e-07
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	1e-08
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	2e-08
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	2e-08
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	2e-08
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	2e-08
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	3e-07
2kkh_A	95	Putative heavy metal transporter; zinc transport,	3e-08
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	4e-08
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	5e-08
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	4e-07
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	5e-08
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	9e-08
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	1e-07
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	2e-07
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	3e-07
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	4e-07
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	9e-07
2kyz_A	67	Heavy metal binding protein; structural genomics,	3e-06
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	2e-05

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 86.3 bits (213), Expect = 8e-23
 Identities = 19/87 (21%), Positives = 37/87 (42%)

Query: 2  SQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTG 61
          +      + M CE CV  +K  L  + G+ + + D+++Q ++V+ +V P  ++ T+   G
Sbjct: 5  TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCG 64

Query: 62 KKTAFWEEEKPAPAESDSKPTDAVAAA 88
          K        KP  +      T      
Sbjct: 65 KDAIIRGAGKPNSSAVAILETFQKYTI 91

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 78.6 bits (194), Expect = 2e-21
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 3  QTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
                V M+C GC  AV RVL K+ GV+ +DIDL  +KV ++       +L T+ KTGK
Sbjct: 2  PKHEFSVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGK 60

Query: 63 KTAFWEEE 70
            ++   E
Sbjct: 61 TVSYLGLE 68

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 79.1 bits (195), Expect = 3e-21
 Identities = 19/75 (25%), Positives = 34/75 (45%)

Query: 3  QTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
           T+   V M+C+ CV AV++ L  + GV+  ++ L++Q V V   +    V   +  TG+
Sbjct: 19 CTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGR 78

Query: 63 KTAFWEEEKPAPAES 77
          +             S
Sbjct: 79 QAVLKGMGSGQLQNS 93

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 82.1 bits (202), Expect = 5e-21
 Identities = 19/87 (21%), Positives = 37/87 (42%)

Query: 2  SQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTG 61
          +      + M CE CV  +K  L  + G+ + + D+++Q ++V+ +V P  ++ T+   G
Sbjct: 6  TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCG 65

Query: 62 KKTAFWEEEKPAPAESDSKPTDAVAAA 88
          K        KP  +      T      
Sbjct: 66 KDAIIRGAGKPNSSAVAILETFQKYTI 92

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 74.0 bits (182), Expect = 1e-19
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 3  QTVVLKVGMSCEGCVGAVKRVLGKMD-GVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTG 61
          +     V M+C GC GAV +VL K++  V   DI L++Q V V   +    +L+ + KTG
Sbjct: 5  KHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTG 64

Query: 62 KKTAFWEE 69
          K+    ++
Sbjct: 65 KEVRSGKQ 72

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 52.0 bits (125), Expect = 5e-11
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 4  TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTG 61
          T+ L V  ++CE C  AV + +   D   T  +DL  +KVT+   +    +   ++  G
Sbjct: 2  TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAG 60

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 52.5 bits (126), Expect = 6e-11
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 1/62 (1%)

Query: 1  MSQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSK 59
              +   V  M+C  C G +K  + K         D   + V V G      + + ++ 
Sbjct: 20 QGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITA 79

Query: 60 TG 61
           G
Sbjct: 80 AG 81

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72

 Score = 51.5 bits (124), Expect = 8e-11
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 1  MSQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQT 56
          ++Q  V+ + GM+C  CV +++ V+ K  GV++  + L     TV+       P  +   
Sbjct: 1  LTQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGA 60

Query: 57 VSKTG 61
          +   G
Sbjct: 61 IEDMG 65

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71

 Score = 50.8 bits (122), Expect = 2e-10
 Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 1  MSQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQK--VTVKGNVQPGAVLQTV 57
          M+QT+ L++ GM C  C  +++R + K+ GV++  ++   ++  V+  G   P  +   V
Sbjct: 1  MAQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAV 60

Query: 58 SKTG 61
           + G
Sbjct: 61 ERAG 64

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 50.3 bits (121), Expect = 2e-10
 Identities = 20/52 (38%), Positives = 32/52 (61%)

Query: 10 GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTG 61
          GM+C  CV AV + L K+ GVE  ++ L++ +  V+G   P A++Q V + G
Sbjct: 8  GMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEG 59

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75

 Score = 48.8 bits (117), Expect = 1e-09
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 4/63 (6%)

Query: 3  QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVS 58
           +V + V GM+C  CV  +++ +GK++GV    + L+E+  T+        P  + + + 
Sbjct: 2  NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID 61

Query: 59 KTG 61
            G
Sbjct: 62 DMG 64

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71

 Score = 48.4 bits (116), Expect = 1e-09
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%)

Query: 3  QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVS 58
          + + L+V GMSC  CV A++  + +++GVE   + L E  V V      V    ++  + 
Sbjct: 5  EQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE 64

Query: 59 KTG 61
            G
Sbjct: 65 DQG 67

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79

 Score = 48.5 bits (116), Expect = 2e-09
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 4/63 (6%)

Query: 3  QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVS 58
           +V + V GM+C  CV  +++ +GK++GV    + L+E+  T+        P  + + + 
Sbjct: 8  NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID 67

Query: 59 KTG 61
            G
Sbjct: 68 DMG 70

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69

 Score = 48.1 bits (115), Expect = 2e-09
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 4/63 (6%)

Query: 3  QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVS 58
          +   L+V GMSC+ CV AV+  +G++DGV    ++L+  KV V      V    +   + 
Sbjct: 2  EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE 61

Query: 59 KTG 61
            G
Sbjct: 62 DQG 64

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72

 Score = 48.1 bits (115), Expect = 3e-09
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTV 57
          +QTV L V GM+C  C   VK+ + K++GV   D+  + ++  V           + +  
Sbjct: 2  TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKAT 61

Query: 58 SKTG 61
          +  G
Sbjct: 62 ADAG 65

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74

 Score = 47.7 bits (114), Expect = 3e-09
 Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 4/72 (5%)

Query: 3  QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVS 58
          + + + V GM+C  C  +V+  L  ++GV    + L + +  V      V+   + + + 
Sbjct: 2  RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE 61

Query: 59 KTGKKTAFWEEE 70
            G +     EE
Sbjct: 62 DAGFEAEILAEE 73

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72

 Score = 47.6 bits (114), Expect = 3e-09
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 3/63 (4%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK--GNVQPGAVLQTVS 58
          ++ V+L V GM+C  C   +   L  + GV   DI L   +  V     V   ++ + + 
Sbjct: 1  AREVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE 60

Query: 59 KTG 61
            G
Sbjct: 61 DCG 63

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90

 Score = 47.8 bits (114), Expect = 4e-09
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 4  TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN---VQPGAVLQTVSK 59
          T    + GM C+ CV  ++  L  +  V +  + L+ +   V  N   V P ++ + +  
Sbjct: 4  TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEA 63

Query: 60 TG 61
            
Sbjct: 64 VS 65

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84

 Score = 47.4 bits (113), Expect = 5e-09
 Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 3  QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVS 58
            + +KV GM+C  C   ++  +GK+ GV+   + L  Q+ T+      +    + + + 
Sbjct: 9  VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE 68

Query: 59 KTGKKTAFWEEEKP 72
            G      ++ K 
Sbjct: 69 AMGFPAFVKKQPKY 82

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 48.5 bits (116), Expect = 6e-09
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN---VQPGAVLQTV 57
           Q   L++ GM+C  CV  ++R L K  GV +  + L   K  +K +   +QP  + Q +
Sbjct: 3  PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFI 62

Query: 58 SKTGKKTAFWEEEKPAPAE 76
             G + A  E+   +   
Sbjct: 63 QDLGFEAAVMEDYAGSDGN 81

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 45.0 bits (107), Expect = 2e-07
 Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 2   SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTV 57
              + L + GM+C  CV  ++  L + +G+    + L   K  VK     + P  +++ +
Sbjct: 79  DGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKII 138

Query: 58  SKTG 61
            + G
Sbjct: 139 EEIG 142

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 46.1 bits (110), Expect = 1e-08
 Identities = 11/61 (18%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 4  TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK--GNVQPGAVLQTVSKT 60
              +V  ++C  CV  +++ +G+++GV   D+ ++++ V V+         + + +   
Sbjct: 2  KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDA 61

Query: 61 G 61
          G
Sbjct: 62 G 62

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71

 Score = 45.7 bits (109), Expect = 2e-08
 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 4/63 (6%)

Query: 3  QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVS 58
          +T  ++V GM C  C  +++R L ++ GV    + +   ++TV      V    + + ++
Sbjct: 3  KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA 62

Query: 59 KTG 61
            G
Sbjct: 63 ALG 65

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68

 Score = 45.7 bits (109), Expect = 2e-08
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 10 GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTG 61
          GMSC  CV  ++  +G++ GV+   + LK++K  VK    NVQ   + Q +++ G
Sbjct: 8  GMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELG 62

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77

 Score = 45.8 bits (109), Expect = 2e-08
 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTV 57
          S    ++V GM+C  CV  ++R L + +G+ +  + L   K  V+     +QP  + + +
Sbjct: 2  SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFI 61

Query: 58 SKTG 61
           + G
Sbjct: 62 RELG 65

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 48.1 bits (114), Expect = 2e-08
 Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 3   QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVS 58
            T ++ + GM+C  CV +++ ++ +++GV+   + L E   TV      + P  +   + 
Sbjct: 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIE 181

Query: 59  KTGKKTAFWEEEKPAPAESD 78
             G + +   E        +
Sbjct: 182 DMGFEASVVSESCSTNPLGN 201

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 44.6 bits (105), Expect = 3e-07
 Identities = 16/93 (17%), Positives = 42/93 (45%), Gaps = 7/93 (7%)

Query: 3   QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN------VQPGAVLQ 55
            T+ L++ GM C+ CV  ++  +G++ GV++  + L+ +   VK +      V     ++
Sbjct: 20  VTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIE 79

Query: 56  TVSKTGKKTAFWEEEKPAPAESDSKPTDAVAAA 88
            +     K +  +  + +  +  S  + +  + 
Sbjct: 80  ALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGSP 112

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95

 Score = 45.9 bits (109), Expect = 3e-08
 Identities = 12/63 (19%), Positives = 28/63 (44%), Gaps = 4/63 (6%)

Query: 3  QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVS 58
          Q     V G+ C   V  ++ +L  +DGV+ + + +  + V V      + P  + + ++
Sbjct: 16 QKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALN 75

Query: 59 KTG 61
          +  
Sbjct: 76 EAR 78

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69

 Score = 44.6 bits (106), Expect = 4e-08
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 10 GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQK--VTVKGNVQPGAVLQTVSKTG 61
          GM+C+ C   VK  L K+ GV++  +   +    + +     P A+   V+  G
Sbjct: 8  GMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLG 61

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 46.3 bits (110), Expect = 5e-08
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTV 57
           + + ++V GM+C  C   +++ L +M GV   +++L  + V V          A+ + +
Sbjct: 5  QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKI 64

Query: 58 SKTG 61
           K G
Sbjct: 65 EKLG 68

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 43.9 bits (104), Expect = 4e-07
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 3   QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVS 58
           +     + GM+C  C   +++ L K++GV    ++   + VTV+          + + V 
Sbjct: 74  EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 133

Query: 59  KTGKKTAFWEEEKPA 73
           K G K     E+   
Sbjct: 134 KLGYKLKLKGEQDSI 148

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Length = 80

 Score = 44.6 bits (106), Expect = 5e-08
 Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 1  MSQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQT 56
          +++     + GM+C  C   +++ L K++GV    ++   + VTV+          + + 
Sbjct: 1  VTEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEA 60

Query: 57 VSKTG 61
          V K G
Sbjct: 61 VDKLG 65

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723

 Score = 46.7 bits (112), Expect = 9e-08
 Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 3  QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVS 58
              ++V GM+C  CV +++  +G ++GVE   ++L  +   ++     +    + + + 
Sbjct: 2  MERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE 61

Query: 59 KTGKKTAFWEEEKPAPAE 76
            G      +    A  E
Sbjct: 62 DLGYGVVDEQAAVSAEVE 79

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71

 Score = 43.6 bits (103), Expect = 1e-07
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 1  MSQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSK 59
          M++  V +V G+SC  C    +R + +++GV    ++    K+TV G      V Q  + 
Sbjct: 1  MAEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASIQQVEQAGAF 60

Query: 60 TGKK 63
             K
Sbjct: 61 EHLK 64

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76

 Score = 43.1 bits (102), Expect = 2e-07
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTV 57
           + + ++V GM+C  C   +++ L +M GV   +++L  + V V          A+ + +
Sbjct: 5  QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKI 64

Query: 58 SKTG 61
           K G
Sbjct: 65 EKLG 68

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73

 Score = 42.8 bits (101), Expect = 3e-07
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT 60
           + +VL++ G+SC  CV  VK+ L +  G +   +DL E  V           ++ V   
Sbjct: 4  VEKIVLELSGLSCHHCVARVKKALEEA-GAKVEKVDLNEAVVAGNK-EDVDKYIKAVEAA 61

Query: 61 G 61
          G
Sbjct: 62 G 62

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75

 Score = 41.5 bits (98), Expect = 9e-07
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTV 57
             + L V GM+C  CV  ++  L K  G+    + L   K  +K     + P  ++ T+
Sbjct: 3  DGVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTI 62

Query: 58 SKTGKKTAFWEEE 70
             G + +  + E
Sbjct: 63 ESLGFEPSLVKIE 75

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Length = 67

 Score = 40.2 bits (94), Expect = 3e-06
 Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 4  TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTG 61
            VL V  +SC  C   + + L ++ GV+ +++ ++E+KV V+      +VL+ + +  
Sbjct: 2  RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETE-NLDSVLKKLEEID 58

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73

 Score = 38.2 bits (89), Expect = 2e-05
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN-VQPGAVLQTVSK 59
                KV GM C  C   V+  + ++ GV    +    +K+ V  +      V   + K
Sbjct: 2  GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQK 61

Query: 60 TG 61
           G
Sbjct: 62 AG 63

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	88
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.44
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.44
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.41
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.4
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.39
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.35
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.24
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.2
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.18
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.18
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	99.16
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.16
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.16
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.15
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.15
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.14
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.14
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	99.12
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.11
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.11
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.1
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.1
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	99.09
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	99.09
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	99.08
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	99.07
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.07
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	99.06
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.05
2kkh_A	95	Putative heavy metal transporter; zinc transport,	99.04
2kyz_A	67	Heavy metal binding protein; structural genomics,	99.03
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	99.0
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.98
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.96
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.92
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.91
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	98.79
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.68
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.62
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.56
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.54
4gwb_A	168	Peptide methionine sulfoxide reductase MSRA 3; str	87.03

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.44  E-value=3.9e-12  Score=57.76  Aligned_cols=64  Identities=39%  Similarity=0.693  Sum_probs=57.1

Q ss_pred             EEEEEecccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCceeeec
Q 034639            4 TVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFWE   68 (88)
Q Consensus         4 ~~~~~~g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~~~~   68 (88)
                      +..|.+||.|.+|...+++.|.+++|+ .+.+++..+.+.+......+.+...+...||.+....
T Consensus         3 ~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   66 (68)
T 3iwl_A            3 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG   66 (68)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEE
T ss_pred             eEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecC
Confidence            456666999999999999999999999 9999999999988877789999999999999887653

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.44  E-value=3.9e-12  Score=58.49  Aligned_cols=66  Identities=20%  Similarity=0.408  Sum_probs=58.6

Q ss_pred             ceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCceeee
Q 034639            2 SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         2 ~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      |.+..|.+ ||.|.+|...+++.|.+++|+..+.+++....+.+.   .......+...+...||.+...
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~   70 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEIL   70 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEc
Confidence            45678999 999999999999999999999999999999999887   2357889999999999987654

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.41  E-value=3.9e-12  Score=58.47  Aligned_cols=65  Identities=26%  Similarity=0.495  Sum_probs=57.9

Q ss_pred             CceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCceeee
Q 034639            1 MSQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         1 ~~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      ||.+..|.+ ||.|.+|...+++.|.+ +|+..+.+++....+.+... ....+...+...||.....
T Consensus         3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~   68 (73)
T 3fry_A            3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLR   68 (73)
T ss_dssp             CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEEC
T ss_pred             ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEec
Confidence            467788999 99999999999999999 99999999999888888744 7888999999999987654

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.40  E-value=1.5e-11  Score=55.70  Aligned_cols=64  Identities=25%  Similarity=0.614  Sum_probs=57.6

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE--eeCCHHHHHHHHHhcCCceee
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK--GNVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~i~~~i~~~g~~~~~   66 (88)
                      ++..|.+ ||.|.+|...+++.+.+++|+..+.+++....+.+.  .......+...+...||....
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~   68 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV   68 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEe
Confidence            4678999 999999999999999999999999999999999887  457888999999999997653

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.39  E-value=2.4e-11  Score=54.96  Aligned_cols=66  Identities=26%  Similarity=0.620  Sum_probs=56.0

Q ss_pred             CceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE--eeCCHHHHHHHHHhcCCceee
Q 034639            1 MSQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK--GNVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         1 ~~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~i~~~i~~~g~~~~~   66 (88)
                      |+++..|.+ ||.|..|...+++.+..++|+..+.+++......+.  .......+...+...||....
T Consensus         1 m~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~   69 (71)
T 2xmw_A            1 MAQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV   69 (71)
T ss_dssp             -CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred             CCcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence            778889999 999999999999999999999999999999998876  235677788889999997643

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.35  E-value=7.6e-11  Score=53.99  Aligned_cols=67  Identities=34%  Similarity=0.528  Sum_probs=58.8

Q ss_pred             CceEEEEEecccCHhhHHHHHHHHhcCC-CeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCceeee
Q 034639            1 MSQTVVLKVGMSCEGCVGAVKRVLGKMD-GVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         1 ~~~~~~~~~g~~c~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      |+.+..|.+.|.|.+|...+++.|.+++ |+..+.+++..+.+.+........+...+...||.....
T Consensus         3 ~m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~   70 (73)
T 1cc8_A            3 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSG   70 (73)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEE
T ss_pred             CceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceee
Confidence            3566777778999999999999999999 999999999999998886667888999999999987543

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.24  E-value=4.1e-10  Score=51.29  Aligned_cols=65  Identities=23%  Similarity=0.383  Sum_probs=54.8

Q ss_pred             ceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE-eeCCHHHHHHHHHhcCCceee
Q 034639            2 SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK-GNVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         2 ~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~i~~~i~~~g~~~~~   66 (88)
                      |.+..|.+ ||.|..|...+++.+..++|+..+.+++....+.+. .......+...+...||....
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~   68 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRD   68 (73)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEE
T ss_pred             CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCcccc
Confidence            34578999 999999999999999999999999999999998887 222356788889999997653

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.20  E-value=6.2e-10  Score=50.25  Aligned_cols=63  Identities=29%  Similarity=0.548  Sum_probs=54.3

Q ss_pred             ceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE-e--eCCHHHHHHHHHhcCCce
Q 034639            2 SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK-G--NVQPGAVLQTVSKTGKKT   64 (88)
Q Consensus         2 ~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~--~~~~~~i~~~i~~~g~~~   64 (88)
                      |.+..|.+ ||.|..|...++..+..++|+..+.+++....+.+. .  ......+...+...||..
T Consensus         4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   70 (71)
T 2l3m_A            4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV   70 (71)
T ss_dssp             EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence            45677899 999999999999999999999999999999998876 2  356778888899999853

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.18  E-value=8.6e-10  Score=49.85  Aligned_cols=63  Identities=27%  Similarity=0.549  Sum_probs=54.7

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE-e--eCCHHHHHHHHHhcCCcee
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK-G--NVQPGAVLQTVSKTGKKTA   65 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~--~~~~~~i~~~i~~~g~~~~   65 (88)
                      .+..|.+ ||.|..|...+++.+..++|+..+.+++......+. .  ......+...+...||...
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   69 (72)
T 1osd_A            3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSS   69 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCE
T ss_pred             eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeE
Confidence            4567899 999999999999999999999999999999998876 2  3567788889999999754

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.18  E-value=1.2e-09  Score=48.64  Aligned_cols=62  Identities=32%  Similarity=0.618  Sum_probs=53.3

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCce
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKT   64 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~   64 (88)
                      .+..|.+ ||.|..|...++..+..++|+..+.+++....+.+.   .......+...+...||..
T Consensus         2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   67 (69)
T 2qif_A            2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            3467899 999999999999999999999999999999998876   2356778888899999853

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=99.16  E-value=2.8e-10  Score=52.35  Aligned_cols=66  Identities=24%  Similarity=0.464  Sum_probs=56.4

Q ss_pred             ceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEe---eCCHHHHHHHHHhcCCceeee
Q 034639            2 SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKG---NVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         2 ~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      |++..|.+ ||.|..|...+++.+..++|+..+.+++......+..   ......+...+...||.....
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~   71 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVI   71 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEE
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEEC
Confidence            45578999 9999999999999999999999999999999888762   346678888899999986544

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.16  E-value=2.2e-09  Score=48.94  Aligned_cols=65  Identities=25%  Similarity=0.557  Sum_probs=55.6

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEe---eCCHHHHHHHHHhcCCceeee
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKG---NVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      .+..|.+ ||.|..|...+++.+..++|+..+.+++......+..   ......+...+...||.....
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~   70 (75)
T 3cjk_B            2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH   70 (75)
T ss_dssp             EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEE
T ss_pred             cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEee
Confidence            3567899 9999999999999999999999999999999988762   346778888999999976543

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.16  E-value=3.7e-10  Score=49.93  Aligned_cols=60  Identities=25%  Similarity=0.499  Sum_probs=53.1

Q ss_pred             EEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCce
Q 034639            5 VVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKT   64 (88)
Q Consensus         5 ~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~   64 (88)
                      ..|.+ ||.|.+|...+++.+..++|+..+.+++......+........+...+...||..
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~   63 (64)
T 2xmm_A            3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV   63 (64)
T ss_dssp             EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred             EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            46889 9999999999999999999999999999999988875567788888999999853

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.15  E-value=8.9e-10  Score=49.80  Aligned_cols=63  Identities=25%  Similarity=0.520  Sum_probs=54.6

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEe---eCCHHHHHHHHHhcCCcee
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKG---NVQPGAVLQTVSKTGKKTA   65 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~~~i~~~i~~~g~~~~   65 (88)
                      ++..|.+ ||.|..|...+++.+..++|+..+.+++......+..   ......+...+...||...
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   69 (72)
T 1aw0_A            3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDAT   69 (72)
T ss_dssp             EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEE
T ss_pred             eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcE
Confidence            4567899 9999999999999999999999999999999988872   2467788888999999754

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.15  E-value=3.8e-10  Score=53.28  Aligned_cols=61  Identities=20%  Similarity=0.373  Sum_probs=54.6

Q ss_pred             EEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCce
Q 034639            4 TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKT   64 (88)
Q Consensus         4 ~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~   64 (88)
                      +..|.+ ||.|..|...+++.|..++|+..+.+++....+.+........+...+...||.+
T Consensus        23 ~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~   84 (85)
T 2k2p_A           23 GLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP   84 (85)
T ss_dssp             EEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred             EEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            467899 9999999999999999999999999999999988885567888999999999853

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.14  E-value=5.3e-09  Score=50.58  Aligned_cols=66  Identities=27%  Similarity=0.498  Sum_probs=57.4

Q ss_pred             eEEEEEecccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCceeeec
Q 034639            3 QTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFWE   68 (88)
Q Consensus         3 ~~~~~~~g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~~~~   68 (88)
                      .+..|.+.|.|..|...+++.|.+++|+..+.+++....+.+........+...+...||.+....
T Consensus        19 ~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~   84 (98)
T 2crl_A           19 CTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKG   84 (98)
T ss_dssp             EEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEE
T ss_pred             eEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEcc
Confidence            345666689999999999999999999999999999999988866678889999999999876543

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.14  E-value=5.9e-10  Score=49.85  Aligned_cols=61  Identities=39%  Similarity=0.691  Sum_probs=53.4

Q ss_pred             EEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCceee
Q 034639            6 VLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         6 ~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~~   66 (88)
                      .|.+ ||.|.+|...+++.+.+++|+..+.+++......+........+...+...||....
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~   64 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEV   64 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEE
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEe
Confidence            4788 999999999999999999999999999999988885446778889999999997643

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=99.12  E-value=1.2e-09  Score=50.44  Aligned_cols=64  Identities=25%  Similarity=0.570  Sum_probs=55.2

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEe---eCCHHHHHHHHHhcCCceee
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKG---NVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~~~i~~~i~~~g~~~~~   66 (88)
                      .+..|.+ ||.|..|...+++.+..++|+..+.+++....+.+..   ......+...+...||....
T Consensus         8 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~   75 (79)
T 1kvi_A            8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVI   75 (79)
T ss_dssp             EEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEE
T ss_pred             EEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEe
Confidence            4577899 9999999999999999999999999999999988862   24667888889999997654

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.11  E-value=2.7e-09  Score=50.72  Aligned_cols=65  Identities=18%  Similarity=0.412  Sum_probs=55.0

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhc---CCceeee
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKT---GKKTAFW   67 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~---g~~~~~~   67 (88)
                      .+..|.+ ||.|..|...+++.|..++|+..+.+++....+.+.   .......+...+...   ||.+...
T Consensus         3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~   74 (90)
T 2g9o_A            3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSIT   74 (90)
T ss_dssp             EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECC
T ss_pred             cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEe
Confidence            3567899 999999999999999999999999999999998887   235677888999999   4866543

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.11  E-value=1.3e-09  Score=51.03  Aligned_cols=64  Identities=22%  Similarity=0.475  Sum_probs=55.4

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEe---eCCHHHHHHHHHhcCCceee
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKG---NVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~~~i~~~i~~~g~~~~~   66 (88)
                      .+..|.+ ||.|.+|...+++.+..++|+..+.+++....+.+..   ......+...+...||....
T Consensus         9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~   76 (84)
T 1q8l_A            9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFV   76 (84)
T ss_dssp             EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEe
Confidence            3567899 9999999999999999999999999999999988872   34677888999999997643

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.10  E-value=1.7e-09  Score=48.55  Aligned_cols=60  Identities=28%  Similarity=0.521  Sum_probs=52.5

Q ss_pred             EEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE--eeCCHHHHHHHHHhcCCcee
Q 034639            6 VLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK--GNVQPGAVLQTVSKTGKKTA   65 (88)
Q Consensus         6 ~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~i~~~i~~~g~~~~   65 (88)
                      .|.+ ||.|..|...+++.+..++|+..+.+++......+.  .......+...+...||...
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~   65 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKAT   65 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEE
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceE
Confidence            4788 999999999999999999999999999999998876  22567788999999999754

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.10  E-value=2.4e-09  Score=48.74  Aligned_cols=64  Identities=23%  Similarity=0.542  Sum_probs=54.8

Q ss_pred             ceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCcee
Q 034639            2 SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTA   65 (88)
Q Consensus         2 ~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~   65 (88)
                      +.+..|.+ ||.|..|...++..+..++|+..+.+++......+.   .......+...+...||...
T Consensus         5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   72 (76)
T 1opz_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVV   72 (76)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEE
T ss_pred             ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCcee
Confidence            34577899 999999999999999999999999999999998876   23467788888999999754

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=99.09  E-value=2.4e-09  Score=49.31  Aligned_cols=66  Identities=23%  Similarity=0.482  Sum_probs=55.9

Q ss_pred             ceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCceeee
Q 034639            2 SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         2 ~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      |.+..|.+ ||.|..|...+++.+..++|+..+.+++......+.   .......+...+...||.....
T Consensus         2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (80)
T 1jww_A            2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLK   71 (80)
T ss_dssp             CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred             ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEec
Confidence            45678999 999999999999999999999999999999888876   2356777888899999976543

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=99.08  E-value=1.8e-09  Score=47.95  Aligned_cols=59  Identities=19%  Similarity=0.576  Sum_probs=51.3

Q ss_pred             EEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE--eeCCHHHHHHHHHhcCCc
Q 034639            5 VVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK--GNVQPGAVLQTVSKTGKK   63 (88)
Q Consensus         5 ~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~i~~~i~~~g~~   63 (88)
                      ..|.+ ||.|..|...+++.+..++|+..+.+++......+.  .......+...+...||.
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~   64 (66)
T 1yg0_A            3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQE   64 (66)
T ss_dssp             EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCC
T ss_pred             EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCC
Confidence            46889 999999999999999999999999999999998886  223667788889888885

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=99.07  E-value=1.8e-09  Score=49.17  Aligned_cols=64  Identities=25%  Similarity=0.478  Sum_probs=53.8

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEe---eCCHHHHHHHHHhcCCceee
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKG---NVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~~~i~~~i~~~g~~~~~   66 (88)
                      .+..|.+ ||.|..|...+++.+..++|+..+.+++......+..   ......+...+...||....
T Consensus         4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   71 (75)
T 1yjr_A            4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSL   71 (75)
T ss_dssp             CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcee
Confidence            3567899 9999999999999999999999999999999988762   23456778888999987543

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.07  E-value=3.6e-09  Score=47.19  Aligned_cols=60  Identities=33%  Similarity=0.648  Sum_probs=52.4

Q ss_pred             EEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEe---eCCHHHHHHHHHhcCCcee
Q 034639            6 VLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKG---NVQPGAVLQTVSKTGKKTA   65 (88)
Q Consensus         6 ~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~~~i~~~i~~~g~~~~   65 (88)
                      .|.+ ||.|..|...+++.+.+++|+..+.+++..+...+..   ......+...+...||...
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   66 (68)
T 1cpz_A            3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAE   66 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEE
T ss_pred             EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence            5789 9999999999999999999999999999999988762   3567788888999998754

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=99.06  E-value=2.3e-09  Score=48.06  Aligned_cols=62  Identities=23%  Similarity=0.504  Sum_probs=53.2

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE-e--eCCHHHHHHHHHhcCCce
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK-G--NVQPGAVLQTVSKTGKKT   64 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~--~~~~~~i~~~i~~~g~~~   64 (88)
                      .+..|.+ ||.|..|...++..+..++|+..+.+++......+. .  ......+...+...||..
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   68 (71)
T 2ldi_A            3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTL   68 (71)
T ss_dssp             EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEE
T ss_pred             EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            3467899 999999999999999999999999999999998876 2  345677888899999865

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.05  E-value=3.9e-09  Score=47.64  Aligned_cols=64  Identities=25%  Similarity=0.498  Sum_probs=54.6

Q ss_pred             EEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEe--eCCHHHHHHHHHhcCCceeee
Q 034639            4 TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKG--NVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         4 ~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      +..|.+ ||.|..|...+++.+.+++|+..+.+++......+..  ......+...+...||.....
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~   69 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEIL   69 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEc
Confidence            457899 9999999999999999999999999999999888762  345677888899999976544

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=99.04  E-value=1.2e-08  Score=48.78  Aligned_cols=65  Identities=18%  Similarity=0.377  Sum_probs=55.4

Q ss_pred             ceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEe---eCCHHHHHHHHHhcCCceee
Q 034639            2 SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKG---NVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         2 ~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~~~i~~~i~~~g~~~~~   66 (88)
                      |.+..|.+ ||.|.+|...++..+..++|+..+.+++....+.+..   ......+...+...||....
T Consensus        15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~   83 (95)
T 2kkh_A           15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANV   83 (95)
T ss_dssp             SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEE
T ss_pred             eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEE
Confidence            34577899 9999999999999999999999999999999988772   24677888889999997654

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=99.03  E-value=2.7e-09  Score=47.78  Aligned_cols=59  Identities=25%  Similarity=0.514  Sum_probs=50.9

Q ss_pred             EEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCcee
Q 034639            5 VVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTA   65 (88)
Q Consensus         5 ~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~   65 (88)
                      ..|.+ ||.|.+|...+++.+.++ |+..+.+++......+..... ..+...+...||...
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~   62 (67)
T 2kyz_A            3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVE   62 (67)
T ss_dssp             EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCC
T ss_pred             EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCcee
Confidence            56889 999999999999999999 999999999999988873323 778888999998654

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=99.00  E-value=3.5e-09  Score=47.92  Aligned_cols=60  Identities=28%  Similarity=0.594  Sum_probs=49.5

Q ss_pred             CceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCce
Q 034639            1 MSQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKT   64 (88)
Q Consensus         1 ~~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~   64 (88)
                      |+.+..|.+ ||.|..|...++..+..++|+..+.+++....+.+.....    ...+...||..
T Consensus         1 m~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~   61 (71)
T 2aj0_A            1 MAEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFE   61 (71)
T ss_dssp             CCCEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTT
T ss_pred             CCeEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCc
Confidence            777788999 9999999999999999999999999999988888774332    34556777753

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.98  E-value=7.6e-09  Score=52.97  Aligned_cols=62  Identities=23%  Similarity=0.533  Sum_probs=54.7

Q ss_pred             EEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE-e--eCCHHHHHHHHHhcCCcee
Q 034639            4 TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK-G--NVQPGAVLQTVSKTGKKTA   65 (88)
Q Consensus         4 ~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~--~~~~~~i~~~i~~~g~~~~   65 (88)
                      +..|.+ ||.|.+|.+.+++.|.+++|+..+.+++....+.+. .  ....+.+...+...||...
T Consensus        81 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~  146 (149)
T 2ew9_A           81 NIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHAS  146 (149)
T ss_dssp             EEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEE
T ss_pred             eeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceE
Confidence            467899 999999999999999999999999999999998887 2  3577889999999999754

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.96  E-value=8.7e-09  Score=52.93  Aligned_cols=64  Identities=23%  Similarity=0.481  Sum_probs=56.3

Q ss_pred             EEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCceeee
Q 034639            4 TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         4 ~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      ...|.+ ||.|..|.+.+++.|.+++|+..+.+++....+.+.   .....+.+...+...||.....
T Consensus        75 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  142 (151)
T 1p6t_A           75 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLK  142 (151)
T ss_dssp             EEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEES
T ss_pred             ccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEc
Confidence            467899 999999999999999999999999999999998887   2357888999999999986543

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.92  E-value=1.6e-08  Score=51.78  Aligned_cols=65  Identities=31%  Similarity=0.493  Sum_probs=55.6

Q ss_pred             ceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEe---eCCHHHHHHHHHhcCCceee
Q 034639            2 SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKG---NVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         2 ~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~~~i~~~i~~~g~~~~~   66 (88)
                      |++..|.+ ||+|.+|...++..+..++|+..+.+++......+..   ......+...+...||....
T Consensus         3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   71 (149)
T 2ew9_A            3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAV   71 (149)
T ss_dssp             CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred             cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEe
Confidence            56788999 9999999999999999999999999999998888762   34567888889999997643

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.91  E-value=2.9e-08  Score=53.45  Aligned_cols=64  Identities=22%  Similarity=0.553  Sum_probs=55.8

Q ss_pred             EEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCceeee
Q 034639            4 TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         4 ~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      +..|.+ ||.|..|...+++.|.+++|+..+.+++....+.+.   .......+...+...||.....
T Consensus       123 ~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  190 (202)
T 2rop_A          123 TTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVV  190 (202)
T ss_dssp             EEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC
T ss_pred             EEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEc
Confidence            467899 999999999999999999999999999999998886   2356788999999999986543

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.79  E-value=2.3e-07  Score=50.96  Aligned_cols=63  Identities=25%  Similarity=0.613  Sum_probs=55.4

Q ss_pred             EEEEecccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCceeee
Q 034639            5 VVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         5 ~~~~~g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      ..|.+.|.|..|...+++.|.+++|+..+.+++....+.+........+...+...||.+...
T Consensus         8 ~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~   70 (222)
T 1qup_A            8 ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIR   70 (222)
T ss_dssp             EEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEE
T ss_pred             EEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccc
Confidence            445557999999999999999999999999999999988886667889999999999987654

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.68  E-value=3.8e-07  Score=50.88  Aligned_cols=63  Identities=25%  Similarity=0.613  Sum_probs=55.4

Q ss_pred             EEEEecccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCceeee
Q 034639            5 VVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         5 ~~~~~g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      ..|.+.|.|.+|...+++.|.+++|+..+.+++....+.+........+...+...||.+...
T Consensus         9 ~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~   71 (249)
T 1jk9_B            9 ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIR   71 (249)
T ss_dssp             EEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEE
T ss_pred             EEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccc
Confidence            445557999999999999999999999999999999998886667889999999999987654

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.62  E-value=6.2e-07  Score=45.94  Aligned_cols=63  Identities=24%  Similarity=0.548  Sum_probs=52.1

Q ss_pred             ceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE-e--eCCHHHHHHHHHhcCCce
Q 034639            2 SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK-G--NVQPGAVLQTVSKTGKKT   64 (88)
Q Consensus         2 ~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~--~~~~~~i~~~i~~~g~~~   64 (88)
                      +.+..|.+ ||+|..|...++..+..++|+..+.+++......+. .  ......+...+...||..
T Consensus         5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   71 (151)
T 1p6t_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (151)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence            34567899 999999999999999999999999999999887775 2  245677778888888853

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.56  E-value=5.4e-07  Score=56.73  Aligned_cols=61  Identities=20%  Similarity=0.518  Sum_probs=55.0

Q ss_pred             EEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCcee
Q 034639            5 VVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTA   65 (88)
Q Consensus         5 ~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~   65 (88)
                      ..|.+ ||+|.+|...+++.+.+++|+..+.+++...+..+.   .....+++.+.+...||...
T Consensus         4 ~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~   68 (723)
T 3j09_A            4 RTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVV   68 (723)
T ss_dssp             EEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEES
T ss_pred             EEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccc
Confidence            56889 999999999999999999999999999999999887   23678899999999999764

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.54  E-value=7.3e-07  Score=47.99  Aligned_cols=59  Identities=25%  Similarity=0.554  Sum_probs=50.4

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE-e--eCCHHHHHHHHHhcC
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK-G--NVQPGAVLQTVSKTG   61 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~--~~~~~~i~~~i~~~g   61 (88)
                      .+..|.+ ||.|.+|...+++.|..++|+..+.+++....+.+. .  ......+...+...+
T Consensus        20 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~   82 (202)
T 2rop_A           20 VTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALP   82 (202)
T ss_dssp             CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSS
T ss_pred             EEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhc
Confidence            3467899 999999999999999999999999999999998886 2  256677888888773

>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}

Probab=87.03  E-value=1.5  Score=23.25  Aligned_cols=35  Identities=23%  Similarity=0.439  Sum_probs=27.8

Q ss_pred             CceEEEEEecccCHhhHHHHHHHHhcCCCeeEEEEEcCCC
Q 034639            1 MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQ   40 (88)
Q Consensus         1 ~~~~~~~~~g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~   40 (88)
                      |+++..|.     .+|-+.++..+.+++||....+-...+
T Consensus         1 Mte~A~fa-----gGCFWg~E~~f~~l~GV~~t~~GYagG   35 (168)
T 4gwb_A            1 MTKRAVLA-----GGCFWGMQDLIRKLPGVIETRVGYTGG   35 (168)
T ss_dssp             -CEEEEEE-----ESCHHHHHHHHTTSTTEEEEEEEEESS
T ss_pred             CceEEEEE-----ccCccchHHHHhcCCCeEEEEEEcCCC
Confidence            66766665     679999999999999999888876654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	88
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	5e-15
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	9e-15
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	1e-13
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	2e-12
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	4e-12
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	6e-12
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	2e-10
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	2e-10
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	2e-10
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	6e-10
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	1e-09
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	2e-09
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	2e-09
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	4e-09

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.3 bits (149), Expect = 5e-15
 Identities = 16/62 (25%), Positives = 33/62 (53%)

Query: 2  SQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTG 61
          +      + M CE CV  +K  L  + G+ + + D+++Q ++V+ +V P  ++ T+   G
Sbjct: 5  TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCG 64

Query: 62 KK 63
          K 
Sbjct: 65 KD 66

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.6 bits (147), Expect = 9e-15
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 3  QTVVLKVGMSCEGCVGAVKRVLGKMD-GVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTG 61
          +     V M+C GC GAV +VL K++  V   DI L++Q V V   +    +L+ + KTG
Sbjct: 4  KHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTG 63

Query: 62 KK 63
          K+
Sbjct: 64 KE 65

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 57.9 bits (140), Expect = 1e-13
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 7  LKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAF 66
            V M+C GC  AV RVL K+ GV+   IDL  +KV ++       +L T+ KTGK  ++
Sbjct: 5  FSVDMTCGGCAEAVSRVLNKLGGVKYD-IDLPNKKVCIESEHSMDTLLATLKKTGKTVSY 63

Query: 67 W 67
           
Sbjct: 64 L 64

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 54.7 bits (132), Expect = 2e-12
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTV 57
          +QTV L V GM+C  C   VK+ + K++GV   D+  + ++  V           + +  
Sbjct: 2  TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKAT 61

Query: 58 SKTG 61
          +  G
Sbjct: 62 ADAG 65

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.0 bits (130), Expect = 4e-12
 Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK--GNVQPGAVLQTVS 58
          ++ V+L V GM+C  C   +   L  + GV   DI L   +  V     V   ++ + + 
Sbjct: 1  AREVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE 60

Query: 59 KTGKKTAFWEE 69
            G       +
Sbjct: 61 DCGFDCEILRD 71

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (129), Expect = 6e-12
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 1  MSQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQT 56
          ++Q  V+ + GM+C  CV +++ V+ K  GV++  + L     TV+       P  +   
Sbjct: 1  LTQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGA 60

Query: 57 VSKTG 61
          +   G
Sbjct: 61 IEDMG 65

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 49.7 bits (119), Expect = 2e-10
 Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 4/63 (6%)

Query: 3  QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVS 58
          + + ++V GM+C  C   +++ L +M GV   +++L  + V V          A+ + + 
Sbjct: 6  KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE 65

Query: 59 KTG 61
          K G
Sbjct: 66 KLG 68

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (119), Expect = 2e-10
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 4/63 (6%)

Query: 3  QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN---VQPGAVLQTVS 58
           +V + V GM+C  CV  +++ +GK++GV    + L+E+  T+  +     P  + + + 
Sbjct: 8  NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID 67

Query: 59 KTG 61
            G
Sbjct: 68 DMG 70

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 49.2 bits (117), Expect = 2e-10
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 4  TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGK 62
          T+ L V  ++CE C  AV + +   D   T  +DL  +KVT+   +    +   ++  G 
Sbjct: 2  TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGH 61

Query: 63 K 63
          +
Sbjct: 62 E 62

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 48.3 bits (115), Expect = 6e-10
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQ-PGAVLQTVSK 59
                KV GM C  C   V+  + ++ GV    +    +K+ V  +      V   + K
Sbjct: 2  GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQK 61

Query: 60 TG 61
           G
Sbjct: 62 AG 63

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 47.6 bits (113), Expect = 1e-09
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 4/73 (5%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTV 57
          ++     + GM+C  C   +++ L K++GV    ++   + VTV+          + + V
Sbjct: 1  TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAV 60

Query: 58 SKTGKKTAFWEEE 70
           K G K     E+
Sbjct: 61 DKLGYKLKLKGEQ 73

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 47.1 bits (112), Expect = 2e-09
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)

Query: 3  QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN---VQPGAVLQTVS 58
          +   L+V GMSC+ CV AV+  +G++DGV    ++L+  KV V  +   V    +   + 
Sbjct: 2  EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE 61

Query: 59 KTG 61
            G
Sbjct: 62 DQG 64

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 2e-09
 Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 2  SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKV---TVKGNVQPGAVLQTV 57
             + +KV GM+C  C   ++  +GK+ GV+   + L  Q+         +    + + +
Sbjct: 8  EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQI 67

Query: 58 SKTGKKTAFWEEEKP 72
             G      ++ K 
Sbjct: 68 EAMGFPAFVKKQPKY 82

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 46.3 bits (110), Expect = 4e-09
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 10 GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTG 61
          GMSC  CV  ++  +G++ GV+   + LK++K  VK    NVQ   + Q +++ G
Sbjct: 8  GMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELG 62

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	88
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.65
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.58
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.55
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.55
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.52
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.51
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.51
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.51
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.51
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.5
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.49
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.47
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.46
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.46

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.1e-15  Score=68.47  Aligned_cols=66  Identities=24%  Similarity=0.527  Sum_probs=60.9

Q ss_pred             CceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCceee
Q 034639            1 MSQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         1 ~~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~~   66 (88)
                      |+++..|.+ ||.|.+|...+++.|.+++|+..+.+++..+++.+.   .......+.+.+...||.+..
T Consensus         1 mt~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l   70 (72)
T d2aw0a_           1 LTQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL   70 (72)
T ss_dssp             CCEEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEE
T ss_pred             CcEEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEe
Confidence            889999999 999999999999999999999999999999999987   346789999999999998753

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.58  E-value=3.9e-14  Score=63.67  Aligned_cols=63  Identities=32%  Similarity=0.601  Sum_probs=57.1

Q ss_pred             ceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCce
Q 034639            2 SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKT   64 (88)
Q Consensus         2 ~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~   64 (88)
                      |++..|.+ ||.|.+|...+++.|.+++|+..+.+++..+++.+.   ...+...+...+...||.+
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~   67 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            45677999 999999999999999999999999999999999987   3368889999999999975

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.55  E-value=4.4e-14  Score=63.98  Aligned_cols=65  Identities=25%  Similarity=0.520  Sum_probs=59.1

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE--eeCCHHHHHHHHHhcCCceeee
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK--GNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      ++..|.+ ||.|.+|...+++.|.+++|+..+.+++..+++.+.  .....+++...+...||.+...
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~   69 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEIL   69 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCCEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCeEEc
Confidence            4678999 999999999999999999999999999999999887  4578889999999999988654

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.55  E-value=8e-14  Score=63.10  Aligned_cols=65  Identities=26%  Similarity=0.543  Sum_probs=58.9

Q ss_pred             ceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCceee
Q 034639            2 SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         2 ~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~~   66 (88)
                      +++..|.+ ||.|.+|...+++.|.+++|+..+.+++..+++.+.   ...+.+++.+.+...||.+..
T Consensus         2 tqt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v   70 (72)
T d1osda_           2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV   70 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            46788999 999999999999999999999999999999999887   346789999999999998763

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.52  E-value=1.6e-13  Score=63.12  Aligned_cols=67  Identities=22%  Similarity=0.471  Sum_probs=60.1

Q ss_pred             ceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCceeeec
Q 034639            2 SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTAFWE   68 (88)
Q Consensus         2 ~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~~~~   68 (88)
                      +++..|.+ ||.|.+|...+++.|..++|+..+.+++..+.+.+.   ......++...+...||.+....
T Consensus         1 T~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (79)
T d1p6ta2           1 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG   71 (79)
T ss_dssp             CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEECC
Confidence            35788999 999999999999999999999999999999999987   34688999999999999876543

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.51  E-value=1.5e-13  Score=61.57  Aligned_cols=61  Identities=33%  Similarity=0.669  Sum_probs=55.6

Q ss_pred             EEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCceee
Q 034639            6 VLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         6 ~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~~   66 (88)
                      .|.+ ||.|.+|...+++.|.+++|+..+.+++..+++.+.   ...+...+.+.+...||.+..
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~v   67 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV   67 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEE
Confidence            5899 999999999999999999999999999999999987   346888999999999998753

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.51  E-value=4.3e-13  Score=60.59  Aligned_cols=64  Identities=25%  Similarity=0.603  Sum_probs=58.5

Q ss_pred             EEEEEecccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCceeee
Q 034639            4 TVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         4 ~~~~~~g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      +..|.++|+|.+|...+++.|.+++|+..+.+++..+++.+.....++++...|...||.+...
T Consensus         7 ~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~A~l~   70 (72)
T d1qupa2           7 EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIR   70 (72)
T ss_dssp             EEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEE
T ss_pred             EEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCCEEEe
Confidence            4567779999999999999999999999999999999999997789999999999999987653

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.6e-13  Score=62.37  Aligned_cols=66  Identities=24%  Similarity=0.558  Sum_probs=59.5

Q ss_pred             ceEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCceeee
Q 034639            2 SQTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         2 ~~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      +.+..|.+ ||.|.+|.+.+++.|.+++|+..+.+++..+++.+.   .......+...+...||.+...
T Consensus         7 ~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~   76 (79)
T d1kvja_           7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH   76 (79)
T ss_dssp             CEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred             ceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeC
Confidence            45678999 999999999999999999999999999999999987   3478899999999999987654

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.51  E-value=2.8e-13  Score=60.21  Aligned_cols=63  Identities=40%  Similarity=0.709  Sum_probs=57.6

Q ss_pred             EEEEEecccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCceeee
Q 034639            4 TVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         4 ~~~~~~g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      ++.|.++|+|.+|...+++.|.+++|+ .+.+++..+++.+......+.+.+.+...||.+...
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a~li   64 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYL   64 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeEEEe
Confidence            567888999999999999999999998 599999999999997789999999999999988754

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=2.2e-13  Score=61.79  Aligned_cols=64  Identities=23%  Similarity=0.387  Sum_probs=57.1

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE-eeCCHHHHHHHHHhcCCceee
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK-GNVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~i~~~i~~~g~~~~~   66 (88)
                      +++.|.+ ||+|.+|...+++.|.+++|+..+.+++..+.+.+. .......+...+...||....
T Consensus         3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~GY~v~~   68 (73)
T d1mwza_           3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRD   68 (73)
T ss_dssp             CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCCCCB
T ss_pred             CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHcCCcccC
Confidence            4678999 999999999999999999999999999999999988 444577899999999997653

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.49  E-value=7.6e-13  Score=59.75  Aligned_cols=65  Identities=35%  Similarity=0.558  Sum_probs=58.9

Q ss_pred             ceEEEEEecccCHhhHHHHHHHHhcC-CCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCceee
Q 034639            2 SQTVVLKVGMSCEGCVGAVKRVLGKM-DGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKTAF   66 (88)
Q Consensus         2 ~~~~~~~~g~~c~~c~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~~~   66 (88)
                      .+++.|.++|+|.+|...+++.|.++ +|+..+.+++...++.+.+...++.+...+.+.||.+..
T Consensus         3 ~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~   68 (72)
T d1cc8a_           3 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRS   68 (72)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEE
T ss_pred             cEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCCccCC
Confidence            35678888999999999999999998 589999999999999998778999999999999998753

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.47  E-value=4.6e-13  Score=60.54  Aligned_cols=62  Identities=24%  Similarity=0.558  Sum_probs=56.2

Q ss_pred             eEEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCce
Q 034639            3 QTVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKT   64 (88)
Q Consensus         3 ~~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~   64 (88)
                      .+..|.+ ||+|.+|...+++.|.+++|+..+.+++..+++.+.   ......++.+.+...||..
T Consensus         6 ~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (72)
T ss_dssp             EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             eEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            3577999 999999999999999999999999999999999987   3467899999999999964

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.46  E-value=1.3e-13  Score=61.10  Aligned_cols=60  Identities=25%  Similarity=0.514  Sum_probs=56.0

Q ss_pred             EEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEEeeCCHHHHHHHHHhcCCce
Q 034639            5 VVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKTGKKT   64 (88)
Q Consensus         5 ~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~i~~~g~~~   64 (88)
                      ..|.+ ||.|.+|...+++.|.+++|+..+.+++..+.+.+......+.+.+.+...||.+
T Consensus         3 ~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~v   63 (64)
T d1sb6a_           3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEV   63 (64)
T ss_dssp             EEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHHHCCCC
T ss_pred             EEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHHcCCCC
Confidence            56899 9999999999999999999999999999999999987788999999999999964

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=4.7e-13  Score=62.15  Aligned_cols=64  Identities=22%  Similarity=0.479  Sum_probs=57.8

Q ss_pred             EEEEEe-cccCHhhHHHHHHHHhcCCCeeEEEEEcCCCEEEEE---eeCCHHHHHHHHHhcCCceeee
Q 034639            4 TVVLKV-GMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK---GNVQPGAVLQTVSKTGKKTAFW   67 (88)
Q Consensus         4 ~~~~~~-g~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~i~~~i~~~g~~~~~~   67 (88)
                      ...|.+ ||.|..|.+.+++.|.+++|+..+.+++..+++.+.   .......+...+...||.+...
T Consensus        10 ~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~   77 (84)
T d1q8la_          10 VLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVK   77 (84)
T ss_dssp             EEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECS
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEc
Confidence            567999 999999999999999999999999999999999887   3477889999999999987654