Citrus Sinensis ID: 034655

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------
Protein Sequence
MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSSPWW
Secondary Structure (PSIPRED)
ccEEEEEEccccccccccccEEEEEEEEEEccccccccEEcccccccccEEEEcccccEEccHHHHHcccccccEEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEcccccccccccEEEEEEEEEEEcccEEEEEccccccccccEEEEcccccccHHHHHHHHccccccEEEEEEcHcccccc
Coil and Loop (DISEMBL)
mgiekqiltpgngpkpvagqkvtvhctgygkngdlsqkfwstkdpgqqpftfqigkgsvikgwdegvmgmqvgevarlrtkpssspww
Flexible Loop (DISEMBL)
mgiekqiltpgngpkpvaGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVgevarlrtkpssspww
Low Complexity Region (SEG)
MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSSPWW
Disordered region (IsUnstruct)
********************KVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEV*************
Disordered Region (DISOPRED)
MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSSPWW
Disordered Region (DISEMBL)
MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVAR***********
Disordered Region (DISPRO)
*GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSSPWW
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSSPWW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	88	2.2.26 [Sep-21-2011]
O04287	112	Peptidyl-prolyl cis-trans	N/A	no	0.965	0.758	0.776	9e-34
Q8LGG0	112	Peptidyl-prolyl cis-trans	yes	no	0.909	0.714	0.8	3e-33
Q2U316	116	FK506-binding protein 1 O	yes	no	0.931	0.706	0.443	2e-14
Q554J3	107	FK506-binding protein 1 O	yes	no	0.886	0.728	0.475	1e-11
Q4HZB8	111	FK506-binding protein 1 O	yes	no	0.943	0.747	0.457	2e-11
O42993	112	Peptidyl-prolyl cis-trans	yes	no	0.875	0.687	0.476	4e-11
P48375	108	12 kDa FK506-binding prot	yes	no	0.920	0.75	0.465	4e-11
Q6KBA8	108	FK506-binding protein 1A	yes	no	0.886	0.722	0.471	4e-10
O42123	108	Peptidyl-prolyl cis-trans	N/A	no	0.897	0.731	0.440	6e-10
Q4WLV6	112	FK506-binding protein 1A	yes	no	0.897	0.705	0.476	9e-10

>sp|O04287|FKB12_VICFA Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Vicia faba GN=FKBP12 PE=1 SV=1

 Score =  142 bits (357), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 66/85 (77%), Positives = 73/85 (85%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+EKQI+  G GP P  GQ VTVHCTGYGKNGDLSQKFWSTKDPGQ PFTF+IG+GSVI
Sbjct: 1  MGVEKQIIRAGTGPNPSRGQNVTVHCTGYGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVI 60

Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          KGWDEGV+GMQ+GEVARLR  P  +
Sbjct: 61 KGWDEGVLGMQLGEVARLRCSPDYA 85

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
Vicia faba (taxid: 3906)
EC: 5EC: .EC: 2EC: .EC: 1EC: .EC: 8

>sp|Q8LGG0|FKB12_ARATH Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Arabidopsis thaliana GN=FKBP12 PE=1 SV=2

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 64/80 (80%), Positives = 74/80 (92%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+EKQ++ PGNGPKP  GQ VTVHCTG+GK+GDLSQKFWSTKD GQ+PF+FQIGKG+VI
Sbjct: 1  MGVEKQVIRPGNGPKPAPGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVI 60

Query: 61 KGWDEGVMGMQVGEVARLRT 80
          KGWDEGV+GMQ+GEVARLR 
Sbjct: 61 KGWDEGVIGMQIGEVARLRC 80

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity). Mediates rapamycin inactivation of TOR protein kinase activity.

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q2U316|FKBP_ASPOR FK506-binding protein 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=fpr1 PE=3 SV=1

 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 6/88 (6%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGY------GKNGDLSQKFWSTKDPGQQPFTFQI 54
          MG+E++I+T G+GP P +G KV++H TG+         G   ++F S++ PG+ P    I
Sbjct: 1  MGVERKIITRGSGPSPASGDKVSIHYTGWIYDPKKANKGFQGKQFDSSRSPGRGPLVVNI 60

Query: 55 GKGSVIKGWDEGVMGMQVGEVARLRTKP 82
          G+G VIKGWDEGVM M +GE + L   P
Sbjct: 61 GQGKVIKGWDEGVMQMSLGEKSTLTITP 88

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q554J3|FKBP1_DICDI FK506-binding protein 1 OS=Dictyostelium discoideum GN=fkbp1 PE=3 SV=1

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+E  I+  G G  P  G  VTVH  G   NG +   F S++  GQ PF F++G G VI
Sbjct: 1  MGVEITIIKEGKGNIPPVGSNVTVHHAGTLTNGTV---FDSSRKRGQ-PFNFKLGAGQVI 56

Query: 61 KGWDEGVMGMQVGEVARLRTKP 82
          KGWDEGV  M+VGE ++L   P
Sbjct: 57 KGWDEGVAKMKVGETSKLTISP 78

PPIases accelerate the folding of proteins by catalyzing the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Dictyostelium discoideum (taxid: 44689)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q4HZB8|FKBP_GIBZE FK506-binding protein 1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FPR1 PE=3 SV=2

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 49/83 (59%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+EK I+T G+GP P  GQKVT+  TG+ +  D ++        G+  F   IG G VI
Sbjct: 1  MGVEKTIITQGSGPSPQVGQKVTMEYTGWLQKEDGTKGDQFDTSVGRGDFVVNIGVGQVI 60

Query: 61 KGWDEGVMGMQVGEVARLRTKPS 83
          KGWDEGV  M++GE A L   P 
Sbjct: 61 KGWDEGVTQMKLGEKATLHISPD 83

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|O42993|FKBP_SCHPO Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fkh1 PE=3 SV=1

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 9/86 (10%)

Query: 1  MGIEKQILTPGNG---PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG 57
          MG+EKQ+++ GNG   PKP  G ++T+H TG   NG   +KF S+ D G  PF   IG G
Sbjct: 1  MGVEKQVISSGNGQDFPKP--GDRITMHYTGTLTNG---KKFDSSVDRGS-PFVCTIGVG 54

Query: 58 SVIKGWDEGVMGMQVGEVARLRTKPS 83
           +I+GWDEGV  M +GE A+L   P 
Sbjct: 55 QLIRGWDEGVPKMSLGEKAKLTITPD 80

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P48375|FKB12_DROME 12 kDa FK506-binding protein OS=Drosophila melanogaster GN=FK506-bp2 PE=3 SV=2

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 5/86 (5%)

Query: 1  MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSV 59
          MG++   + PG+G   P  GQKVTVH TG   +G    KF S++D   +PF F IGKG V
Sbjct: 1  MGVQVVPIAPGDGSTYPKNGQKVTVHYTGTLDDG---TKFDSSRD-RNKPFKFTIGKGEV 56

Query: 60 IKGWDEGVMGMQVGEVARLRTKPSSS 85
          I+GWDEGV  + VG+ A+L   P  +
Sbjct: 57 IRGWDEGVAQLSVGQRAKLICSPDYA 82

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Binds to ligand-free TGF beta type I receptor, from which it is released upon a ligand-induced, type II receptor mediated phosphorylation of the type I receptor. Binding is inhibitory to the signaling pathways of the TGF beta family ligands.

Drosophila melanogaster (taxid: 7227)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q6KBA8|FKB1A_EMENI FK506-binding protein 1A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fprA PE=3 SV=1

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 11/89 (12%)

Query: 1  MGIEKQILTPGNG---PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKD-PGQQPFTFQIGK 56
          MG+E Q ++PG+G   PKP  G  V++H TG   +G    KF S++D PG   F  QIG 
Sbjct: 1  MGVEVQRISPGDGKNFPKP--GDTVSIHYTGTLADG---SKFDSSRDRPGT--FVTQIGV 53

Query: 57 GSVIKGWDEGVMGMQVGEVARLRTKPSSS 85
          G VIKGWDEGV+ + VGE A+L   P  +
Sbjct: 54 GRVIKGWDEGVLQLSVGEKAKLICTPDYA 82

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|O42123|FKB1A_XENLA Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Xenopus laevis GN=fkbp1a PE=3 SV=3

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 5/84 (5%)

Query: 1  MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSV 59
          MG++ + +T G+G   P  GQ V VH  G  +NG   +KF S++D   +PF F IG+  V
Sbjct: 1  MGVQVETITEGDGRTFPKKGQTVVVHYVGSLENG---KKFDSSRDR-NKPFKFIIGRCEV 56

Query: 60 IKGWDEGVMGMQVGEVARLRTKPS 83
          I+GW+EGV  M VG+ ARL   P 
Sbjct: 57 IRGWEEGVAQMSVGQRARLTCSPD 80

Keeps in an inactive conformation TGFBR1, the TGF-beta type I serine/threonine kinase receptor, preventing TGF-beta receptor activation in absence of ligand. May modulate the RYR1 calcium channel activity. PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Xenopus laevis (taxid: 8355)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q4WLV6|FKB1A_ASPFU FK506-binding protein 1A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=fpr1A PE=3 SV=1

 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 5/84 (5%)

Query: 1  MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSV 59
          MG+ K++ +PGNG   P  G  VT+H TG   +G    KF S+ D   +PF  QIG G V
Sbjct: 1  MGVTKELKSPGNGVDFPKKGDFVTIHYTGRLTDG---SKFDSSVDR-NEPFQTQIGTGRV 56

Query: 60 IKGWDEGVMGMQVGEVARLRTKPS 83
          IKGWDEGV  M +GE A L   P 
Sbjct: 57 IKGWDEGVPQMSLGEKAVLTITPD 80

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	88
375281956	112	FKBP protein [Chimonanthus praecox]	0.965	0.758	0.835	1e-34
255563242	112	immunophilin, putative [Ricinus communis	0.965	0.758	0.8	3e-34
357445945	112	Peptidyl-prolyl isomerase FKBP12 [Medica	0.965	0.758	0.811	9e-34
388493830	112	unknown [Lotus japonicus] gi|388502206|g	0.965	0.758	0.8	2e-33
352962784	112	FK506-binding protein 12 [Fragaria x ana	0.965	0.758	0.788	5e-33
351725625	112	uncharacterized protein LOC100305505 [Gl	0.965	0.758	0.776	5e-33
224093312	112	predicted protein [Populus trichocarpa]	0.965	0.758	0.788	7e-33
389889182	112	FK506-binding protein 12 [Prunus persica	0.965	0.758	0.764	9e-33
351725045	112	uncharacterized protein LOC100500283 [Gl	0.965	0.758	0.776	9e-33
225465730	112	PREDICTED: uncharacterized protein LOC10	0.965	0.758	0.788	2e-32

>gi|375281956|gb|AFA45123.1| FKBP protein [Chimonanthus praecox]

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/85 (83%), Positives = 77/85 (90%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+EKQ+L PGNGPKPVAGQ VTVHC G+GKN DLSQKFWSTKDPGQ+PFTFQIGKGSVI
Sbjct: 1  MGVEKQVLRPGNGPKPVAGQSVTVHCAGFGKNRDLSQKFWSTKDPGQKPFTFQIGKGSVI 60

Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          KGWDEGVMGMQVGEVARL+  P  +
Sbjct: 61 KGWDEGVMGMQVGEVARLQCTPDYA 85

Source: Chimonanthus praecox

Species: Chimonanthus praecox

Genus: Chimonanthus

Family: Calycanthaceae

Order: Laurales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563242|ref|XP_002522624.1| immunophilin, putative [Ricinus communis] gi|223538100|gb|EEF39711.1| immunophilin, putative [Ricinus communis]

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/85 (80%), Positives = 78/85 (91%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+EKQ++ PGNGPKP AGQ VTVHCTG+GKNGDLSQKFWSTKDPGQ+PFTF+IG+G+VI
Sbjct: 1  MGVEKQLIRPGNGPKPAAGQTVTVHCTGFGKNGDLSQKFWSTKDPGQKPFTFKIGQGNVI 60

Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          KGWDEGVMGMQ+GEVARLR  P  +
Sbjct: 61 KGWDEGVMGMQIGEVARLRCSPDYA 85

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445945|ref|XP_003593250.1| Peptidyl-prolyl isomerase FKBP12 [Medicago truncatula] gi|217069934|gb|ACJ83327.1| unknown [Medicago truncatula] gi|355482298|gb|AES63501.1| Peptidyl-prolyl isomerase FKBP12 [Medicago truncatula] gi|388509542|gb|AFK42837.1| unknown [Medicago truncatula]

 Score =  147 bits (371), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 69/85 (81%), Positives = 75/85 (88%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+EKQI+ PGNGPKP  GQ VTVHCTGYGKN DLSQKFWSTKDPGQ PFTF+IGKGSVI
Sbjct: 1  MGVEKQIVRPGNGPKPTPGQNVTVHCTGYGKNRDLSQKFWSTKDPGQNPFTFKIGKGSVI 60

Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          KGWDEGV+GMQ+GEVARLR  P  +
Sbjct: 61 KGWDEGVIGMQIGEVARLRCSPDYA 85

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493830|gb|AFK34981.1| unknown [Lotus japonicus] gi|388502206|gb|AFK39169.1| unknown [Lotus japonicus] gi|388509866|gb|AFK42999.1| unknown [Lotus japonicus]

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/85 (80%), Positives = 77/85 (90%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+EKQ+L PG GPKPV GQ VTVHCTG+GKNGDLSQ+FWSTKDPGQ+PFTF+IG+GSVI
Sbjct: 1  MGVEKQLLRPGTGPKPVPGQNVTVHCTGFGKNGDLSQQFWSTKDPGQKPFTFKIGQGSVI 60

Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          KGWDEGV+GMQVGEVARLR  P  +
Sbjct: 61 KGWDEGVLGMQVGEVARLRCSPDYA 85

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|352962784|gb|AEQ63297.1| FK506-binding protein 12 [Fragaria x ananassa]

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 67/85 (78%), Positives = 77/85 (90%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+EK++L+ G GPKPV GQKVTVHCTGYGKNGDL+ KFWSTKDPGQQPF+F+IG+GSVI
Sbjct: 1  MGVEKEVLSAGTGPKPVPGQKVTVHCTGYGKNGDLNLKFWSTKDPGQQPFSFKIGQGSVI 60

Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          KGWDEGV+GMQVGEVARLR  P  +
Sbjct: 61 KGWDEGVLGMQVGEVARLRCSPDYA 85

Source: Fragaria x ananassa

Species: Fragaria x ananassa

Genus: Fragaria

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725625|ref|NP_001236331.1| uncharacterized protein LOC100305505 [Glycine max] gi|255625723|gb|ACU13206.1| unknown [Glycine max]

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 66/85 (77%), Positives = 75/85 (88%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+EKQ+L PG GPKP+ GQ VTVHC G+GKNGDLSQKFWSTKDPGQ PFTF+IG+GSVI
Sbjct: 1  MGVEKQLLRPGTGPKPIPGQNVTVHCAGFGKNGDLSQKFWSTKDPGQDPFTFKIGQGSVI 60

Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          KGWDEGV+GMQ+GEVARLR  P  +
Sbjct: 61 KGWDEGVLGMQIGEVARLRCSPDYA 85

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093312|ref|XP_002309877.1| predicted protein [Populus trichocarpa] gi|222852780|gb|EEE90327.1| predicted protein [Populus trichocarpa]

 Score =  144 bits (363), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 67/85 (78%), Positives = 75/85 (88%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+EKQ++ PG GPKP AGQ VTVHCTG+GKN DLSQKFWSTKDPGQ+PF F+IG+GSVI
Sbjct: 1  MGVEKQVVRPGTGPKPTAGQNVTVHCTGFGKNRDLSQKFWSTKDPGQKPFAFKIGQGSVI 60

Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          KGWDEGVMGMQVGEVARLR  P  +
Sbjct: 61 KGWDEGVMGMQVGEVARLRCSPDYA 85

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|389889182|gb|AFL03401.1| FK506-binding protein 12 [Prunus persica]

 Score =  144 bits (362), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 65/85 (76%), Positives = 75/85 (88%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+E+++++ G GPKP  GQKVTVHCTGYGKNGDLSQKFWSTKDPGQ PF+FQIGKG+VI
Sbjct: 1  MGVEREVVSAGTGPKPTVGQKVTVHCTGYGKNGDLSQKFWSTKDPGQNPFSFQIGKGAVI 60

Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          KGWDEGV+ MQVGEVARLR  P  +
Sbjct: 61 KGWDEGVLQMQVGEVARLRCSPDYA 85

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725045|ref|NP_001235799.1| uncharacterized protein LOC100500283 [Glycine max] gi|255629932|gb|ACU15318.1| unknown [Glycine max]

 Score =  144 bits (362), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 66/85 (77%), Positives = 75/85 (88%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+EKQ+L  G GPKP+ GQ VTVHCTG+GKNGDLSQKFWSTKDPGQ PFTF+IG+GSVI
Sbjct: 1  MGVEKQLLRSGTGPKPIPGQNVTVHCTGFGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVI 60

Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          KGWDEGV+GMQ+GEVARLR  P  +
Sbjct: 61 KGWDEGVLGMQIGEVARLRCSPDYA 85

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465730|ref|XP_002263647.1| PREDICTED: uncharacterized protein LOC100265806 [Vitis vinifera] gi|296087468|emb|CBI34057.3| unnamed protein product [Vitis vinifera] gi|352962782|gb|AEQ63296.1| FK506-binding protein 12 [Vitis vinifera]

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/85 (78%), Positives = 76/85 (89%)

Query: 1  MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          MG+EK +L+ G GPKPV GQ VTVHCTG+GKNGDLSQKFWSTKDPGQ+PFTF+IG+GSVI
Sbjct: 1  MGVEKVLLSAGTGPKPVRGQNVTVHCTGFGKNGDLSQKFWSTKDPGQKPFTFKIGQGSVI 60

Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          KGWDEGVMGMQVGEVARL+  P  +
Sbjct: 61 KGWDEGVMGMQVGEVARLQCSPDYA 85

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	88
TAIR|locus:2173438	112	FKBP12 "AT5G64350" [Arabidopsi	0.897	0.705	0.810	3.6e-34
UNIPROTKB|Q6K8D4	112	OJ1175_B01.15 "Peptidyl-prolyl	0.931	0.732	0.743	8.8e-31
UNIPROTKB|Q8I7D8	94	Q8I7D8 "Peptidyl-prolyl cis-tr	0.886	0.829	0.493	6.2e-14
POMBASE|SPBC839.17c	112	fkh1 "FKBP12 peptidyl-prolyl c	0.863	0.678	0.482	7.9e-14
UNIPROTKB|Q74AS7	156	GSU2274 "Peptidyl-prolyl cis-t	0.875	0.493	0.506	1.6e-13
TIGR_CMR|GSU_2274	156	GSU_2274 "FKBP-type peptidyl-p	0.875	0.493	0.506	1.6e-13
DICTYBASE|DDB_G0275227	107	DDB_G0275227 "FKBP-type peptid	0.886	0.728	0.475	2.1e-13
FB|FBgn0013954	108	FK506-bp2 "FK506-binding prote	0.886	0.722	0.481	4.4e-13
ZFIN|ZDB-GENE-030131-7275	108	fkbp1aa "FK506 binding protein	0.886	0.722	0.469	4.4e-13
UNIPROTKB|Q7NMC5	161	glr0841 "Peptidyl-prolyl cis-t	0.75	0.409	0.542	5.6e-13

TAIR|locus:2173438 FKBP12 "AT5G64350" [Arabidopsis thaliana (taxid:3702)]

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 64/79 (81%), Positives = 74/79 (93%)

Query:     1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
             MG+EKQ++ PGNGPKP  GQ VTVHCTG+GK+GDLSQKFWSTKD GQ+PF+FQIGKG+VI
Sbjct:     1 MGVEKQVIRPGNGPKPAPGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVI 60

Query:    61 KGWDEGVMGMQVGEVARLR 79
             KGWDEGV+GMQ+GEVARLR
Sbjct:    61 KGWDEGVIGMQIGEVARLR 79

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IBA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS;IBA

GO:0005528 "FK506 binding" evidence=ISS;IBA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0016020 "membrane" evidence=IBA

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0005829 "cytosol" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q6K8D4 OJ1175_B01.15 "Peptidyl-prolyl cis-trans isomerase" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 61/82 (74%), Positives = 70/82 (85%)

Query:     1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
             MG EK IL  G GPKPV GQKVTVHCTG+GK+ DL++KFWSTKD GQ+PF+F IG+GSVI
Sbjct:     1 MGFEKTILKAGTGPKPVKGQKVTVHCTGFGKDNDLAKKFWSTKDAGQEPFSFNIGQGSVI 60

Query:    61 KGWDEGVMGMQVGEVARLRTKP 82
             KGWDEGVM MQVGEVAR++  P
Sbjct:    61 KGWDEGVMTMQVGEVARIQCTP 82

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|Q8I7D8 Q8I7D8 "Peptidyl-prolyl cis-trans isomerase" [Ciona intestinalis (taxid:7719)]

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 41/83 (49%), Positives = 54/83 (65%)

Query:     1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSV 59
             MGI+K+++  GNG   P A Q V  H TG  ++G   +KF S++D  + PFTF+IG G V
Sbjct:     1 MGIDKKVIKEGNGTSFPKANQTVKXHYTGTLESG---KKFDSSRDRNK-PFTFKIGCGQV 56

Query:    60 IKGWDEGVMGMQVGEVARLRTKP 82
             I+GWDEGV+ M VGE A L   P
Sbjct:    57 IRGWDEGVIQMSVGERATLTCSP 79

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

POMBASE|SPBC839.17c fkh1 "FKBP12 peptidyl-prolyl cis-trans isomerase Fkh1" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 41/85 (48%), Positives = 54/85 (63%)

Query:     1 MGIEKQILTPGNG---PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG 57
             MG+EKQ+++ GNG   PKP  G ++T+H TG   NG   +KF S+ D G  PF   IG G
Sbjct:     1 MGVEKQVISSGNGQDFPKP--GDRITMHYTGTLTNG---KKFDSSVDRGS-PFVCTIGVG 54

Query:    58 SVIKGWDEGVMGMQVGEVARLRTKP 82
              +I+GWDEGV  M +GE A+L   P
Sbjct:    55 QLIRGWDEGVPKMSLGEKAKLTITP 79

GO:0000747 "conjugation with cellular fusion" evidence=IMP

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006457 "protein folding" evidence=IEA

UNIPROTKB|Q74AS7 GSU2274 "Peptidyl-prolyl cis-trans isomerase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 41/81 (50%), Positives = 49/81 (60%)

Query:     2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
             G+    L  G+G  PVAG+ V VH TG+ +NG    KF S+ D G+ PF F IG G VI 
Sbjct:    50 GLSYVDLAAGSGAAPVAGKPVKVHYTGWLENGT---KFDSSVDRGE-PFVFTIGAGEVIP 105

Query:    62 GWDEGVMGMQVGEVARLRTKP 82
             GWDEGVM M+VG   RL   P
Sbjct:   106 GWDEGVMSMKVGGKRRLIVPP 126

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

TIGR_CMR|GSU_2274 GSU_2274 "FKBP-type peptidyl-prolyl cis-trans isomerase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 41/81 (50%), Positives = 49/81 (60%)

Query:     2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
             G+    L  G+G  PVAG+ V VH TG+ +NG    KF S+ D G+ PF F IG G VI 
Sbjct:    50 GLSYVDLAAGSGAAPVAGKPVKVHYTGWLENGT---KFDSSVDRGE-PFVFTIGAGEVIP 105

Query:    62 GWDEGVMGMQVGEVARLRTKP 82
             GWDEGVM M+VG   RL   P
Sbjct:   106 GWDEGVMSMKVGGKRRLIVPP 126

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0006457 "protein folding" evidence=ISS

DICTYBASE|DDB_G0275227 DDB_G0275227 "FKBP-type peptidylprolyl cis-trans isomerase (PPIase)" [Dictyostelium discoideum (taxid:44689)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 39/82 (47%), Positives = 49/82 (59%)

Query:     1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
             MG+E  I+  G G  P  G  VTVH  G   NG +   F S++  GQ PF F++G G VI
Sbjct:     1 MGVEITIIKEGKGNIPPVGSNVTVHHAGTLTNGTV---FDSSRKRGQ-PFNFKLGAGQVI 56

Query:    61 KGWDEGVMGMQVGEVARLRTKP 82
             KGWDEGV  M+VGE ++L   P
Sbjct:    57 KGWDEGVAKMKVGETSKLTISP 78

GO:0006457 "protein folding" evidence=IEA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IEA;IBA

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IEA;IBA

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0016020 "membrane" evidence=IBA

GO:0005528 "FK506 binding" evidence=IBA

GO:0016853 "isomerase activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

FB|FBgn0013954 FK506-bp2 "FK506-binding protein 2" [Drosophila melanogaster (taxid:7227)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 40/83 (48%), Positives = 52/83 (62%)

Query:     1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSV 59
             MG++   + PG+G   P  GQKVTVH TG   +G    KF S++D  + PF F IGKG V
Sbjct:     1 MGVQVVPIAPGDGSTYPKNGQKVTVHYTGTLDDGT---KFDSSRDRNK-PFKFTIGKGEV 56

Query:    60 IKGWDEGVMGMQVGEVARLRTKP 82
             I+GWDEGV  + VG+ A+L   P
Sbjct:    57 IRGWDEGVAQLSVGQRAKLICSP 79

GO:0005528 "FK506 binding" evidence=ISS;IBA;NAS

GO:0005737 "cytoplasm" evidence=ISS;NAS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS;IBA;NAS

GO:0006457 "protein folding" evidence=ISS;NAS

GO:0006974 "response to DNA damage stimulus" evidence=IMP

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0016020 "membrane" evidence=IBA

ZFIN|ZDB-GENE-030131-7275 fkbp1aa "FK506 binding protein 1Aa" [Danio rerio (taxid:7955)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 39/83 (46%), Positives = 52/83 (62%)

Query:     1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSV 59
             MG+E + +TPG+G   P  GQ   VH  G   +G   +KF S++D G+ PF F+IGK  V
Sbjct:     1 MGVEVETITPGDGSTFPKKGQTCVVHYVGSLTDG---RKFDSSRDRGK-PFKFKIGKQEV 56

Query:    60 IKGWDEGVMGMQVGEVARLRTKP 82
             I+GWDEGV  M VG+ A+L   P
Sbjct:    57 IRGWDEGVAQMSVGQRAKLTCTP 79

GO:0006457 "protein folding" evidence=IEA

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IBA

GO:0033017 "sarcoplasmic reticulum membrane" evidence=IBA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IEA;IBA

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0005528 "FK506 binding" evidence=IBA

GO:0016853 "isomerase activity" evidence=IEA

UNIPROTKB|Q7NMC5 glr0841 "Peptidyl-prolyl cis-trans isomerase" [Gloeobacter violaceus PCC 7421 (taxid:251221)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 38/70 (54%), Positives = 48/70 (68%)

Query:     9 TPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVM 68
             T GNG  P  GQ+VTVH TG  ++G   +KF S++D GQ PF+F IG G VI+GWDEGV 
Sbjct:    63 TVGNGASPQKGQRVTVHYTGTLEDG---KKFDSSRDRGQ-PFSFTIGVGQVIQGWDEGVA 118

Query:    69 GMQVGEVARL 78
              M+VG   +L
Sbjct:   119 TMKVGGKRKL 128

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O04287	FKB12_VICFA	5, ., 2, ., 1, ., 8	0.7764	0.9659	0.7589	N/A	no
Q8LGG0	FKB12_ARATH	5, ., 2, ., 1, ., 8	0.8	0.9090	0.7142	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	5.2.1	0.976
4th Layer	5.2.1.8	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_VII1249	hypothetical protein (113 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_Genewise1_v1.C_LG_V2929	hypothetical protein (185 aa)			•						0.495
	eugene3.00031249	hypothetical protein (131 aa)			•						0.488
	fgenesh4_pg.C_scaffold_40000135	hypothetical protein (210 aa)			•				•		0.484
	eugene3.02000029	hypothetical protein (122 aa)			•				•		0.433
	gw1.I.4198.1	SubName- Full=Putative uncharacterized protein; (2483 aa)					•		•		0.430
	estExt_fgenesh4_pg.C_LG_XII0405	hypothetical protein (258 aa)			•						0.412
	grail3.0051013901	hypothetical protein (181 aa)			•						0.411

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	88
pfam00254	94	pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-t	4e-19
COG0545	205	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans	7e-18
COG1047	174	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans	2e-07
TIGR00115	408	TIGR00115, tig, trigger factor	2e-04
PRK11570	206	PRK11570, PRK11570, peptidyl-prolyl cis-trans isom	5e-04
PRK01490	435	PRK01490, tig, trigger factor; Provisional	0.003

>gnl|CDD|215821 pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-trans isomerase

 Score = 73.8 bits (182), Expect = 4e-19
 Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 4/68 (5%)

Query: 15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGE 74
          K   G  VTVH TG  ++G     F S+KD G+ PF F +G G VI GWDEG++GM+VGE
Sbjct: 4  KAKKGDTVTVHYTGKLEDG---TVFDSSKDRGK-PFEFTLGSGQVIPGWDEGLLGMKVGE 59

Query: 75 VARLRTKP 82
            +L   P
Sbjct: 60 KRKLTIPP 67

Length = 94

>gnl|CDD|223619 COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 73.6 bits (181), Expect = 7e-18
 Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 6/77 (7%)

Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           G++ ++L  G+G  P  G  VTVH TG   +G     F S+ D GQ P  F +G   VI 
Sbjct: 102 GLQYKVLKAGDGAAPKKGDTVTVHYTGTLIDG---TVFDSSYDRGQ-PAEFPLGG--VIP 155

Query: 62  GWDEGVMGMQVGEVARL 78
           GWDEG+ GM+VG   +L
Sbjct: 156 GWDEGLQGMKVGGKRKL 172

Length = 205

>gnl|CDD|223976 COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]

 Score = 45.7 bits (109), Expect = 2e-07
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)

Query: 19 GQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGE 74
          G  V++H T   ++G++     +T +    P TF +G G +I G +E ++G +VGE
Sbjct: 6  GDVVSLHYTLKVEDGEV---VDTTDENYG-PLTFIVGAGQLIPGLEEALLGKEVGE 57

Length = 174

>gnl|CDD|232831 TIGR00115, tig, trigger factor

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 50  FTFQIGKGSVIKGWDEGVMGMQVGEVA 76
           F+ ++G G  I G++E ++GM+ GE  
Sbjct: 174 FSLELGSGQFIPGFEEQLVGMKAGEEK 200

Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome [Protein fate, Protein folding and stabilization]. Length = 408

>gnl|CDD|183207 PRK11570, PRK11570, peptidyl-prolyl cis-trans isomerase; Provisional

 Score = 36.3 bits (84), Expect = 5e-04
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           G++ ++LT G G  P    +V VH TG   +G +   F S+   G +P  F +    VI 
Sbjct: 103 GLQFRVLTQGEGAIPARTDRVRVHYTGKLIDGTV---FDSSVARG-EPAEFPV--NGVIP 156

Query: 62  GWDEGVMGMQVG 73
           GW E +  M VG
Sbjct: 157 GWIEALTLMPVG 168

Length = 206

>gnl|CDD|234956 PRK01490, tig, trigger factor; Provisional

 Score = 34.4 bits (80), Expect = 0.003
 Identities = 10/25 (40%), Positives = 18/25 (72%)

Query: 50  FTFQIGKGSVIKGWDEGVMGMQVGE 74
           F+ ++G G  I G++E ++GM+ GE
Sbjct: 185 FSLELGSGRFIPGFEEQLVGMKAGE 209

Length = 435

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	88
KOG0544	108	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.92
COG0545	205	FkpA FKBP-type peptidyl-prolyl cis-trans isomerase	99.91
PRK11570	206	peptidyl-prolyl cis-trans isomerase; Provisional	99.87
KOG0549	188	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.86
TIGR03516	177	ppisom_GldI peptidyl-prolyl isomerase, gliding mot	99.84
KOG0552	226	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.84
PRK10902	269	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	99.83
PF00254	94	FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomer	99.79
PRK15095	156	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	99.74
COG1047	174	SlpA FKBP-type peptidyl-prolyl cis-trans isomerase	99.66
PRK10737	196	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	99.64
KOG0543	397	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.34
TIGR00115	408	tig trigger factor. Trigger factor is a ribosome-a	99.03
COG0544	441	Tig FKBP-type peptidyl-prolyl cis-trans isomerase	99.02
PRK01490	435	tig trigger factor; Provisional	98.98
KOG0543	397	consensus FKBP-type peptidyl-prolyl cis-trans isom	98.94
KOG0545	329	consensus Aryl-hydrocarbon receptor-interacting pr	98.58
KOG0549	188	consensus FKBP-type peptidyl-prolyl cis-trans isom	97.53

>KOG0544 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.92  E-value=9.1e-25  Score=123.39  Aligned_cols=81  Identities=57%  Similarity=1.006  Sum_probs=77.6

Q ss_pred             CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034655            1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR   79 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~   79 (88)
                      ||+.++++.+|+|.. |+.||.|++||++.+.||   +.||||.+++ +|+.|.+|.+++|.||++++..|.+|+++++.
T Consensus         1 mGv~~~~i~~Gdg~tfpK~Gqtvt~hYtg~L~dG---~kfDSs~dr~-kPfkf~IGkgeVIkGwdegv~qmsvGekakLt   76 (108)
T KOG0544|consen    1 MGVEKQVISPGDGRTFPKKGQTVTVHYTGTLQDG---KKFDSSRDRG-KPFKFKIGKGEVIKGWDEGVAQMSVGEKAKLT   76 (108)
T ss_pred             CCceeEEeeCCCCcccCCCCCEEEEEEEeEecCC---cEeecccccC-CCeeEEecCcceeechhhcchhccccccceee
Confidence            899999999999966 999999999999999888   9999999976 69999999999999999999999999999999


Q ss_pred             ECCCCC
Q 034655           80 TKPSSS   85 (88)
Q Consensus        80 ip~~~a   85 (88)
                      |+|++|
T Consensus        77 i~pd~a   82 (108)
T KOG0544|consen   77 ISPDYA   82 (108)
T ss_pred             eccccc
Confidence            999876

>COG0545 FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

Probab=99.91  E-value=1.7e-24  Score=137.16  Aligned_cols=78  Identities=44%  Similarity=0.778  Sum_probs=75.0

Q ss_pred             CeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEEC
Q 034655            2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTK   81 (88)
Q Consensus         2 Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip   81 (88)
                      |++|++++.|+|..|+.+|.|.+||++++.||   ++||||++++ +|+.|.+|  ++|+||.++|.+|++|++++++||
T Consensus       102 gl~y~~~~~G~G~~~~~~~~V~vhY~G~l~~G---~vFDsS~~rg-~p~~f~l~--~vI~Gw~egl~~M~vG~k~~l~IP  175 (205)
T COG0545         102 GLQYKVLKAGDGAAPKKGDTVTVHYTGTLIDG---TVFDSSYDRG-QPAEFPLG--GVIPGWDEGLQGMKVGGKRKLTIP  175 (205)
T ss_pred             CcEEEEEeccCCCCCCCCCEEEEEEEEecCCC---CccccccccC-CCceeecC--CeeehHHHHHhhCCCCceEEEEeC
Confidence            79999999999999999999999999999998   9999999987 59999996  999999999999999999999999


Q ss_pred             CCCC
Q 034655           82 PSSS   85 (88)
Q Consensus        82 ~~~a   85 (88)
                      |++|
T Consensus       176 ~~la  179 (205)
T COG0545         176 PELA  179 (205)
T ss_pred             chhc
Confidence            9987

>PRK11570 peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.87  E-value=1.8e-21  Score=125.07  Aligned_cols=79  Identities=33%  Similarity=0.509  Sum_probs=73.5

Q ss_pred             CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      .|++|+++++|+|..|+.+|.|.+||++++.||   ++|++|+.++ +|+.|.++  .+++||+++|.+|++|++++++|
T Consensus       102 sGl~y~vi~~G~G~~p~~~d~V~v~Y~g~l~dG---~vfdss~~~g-~P~~f~l~--~vipG~~eaL~~M~~G~k~~~~I  175 (206)
T PRK11570        102 SGLQFRVLTQGEGAIPARTDRVRVHYTGKLIDG---TVFDSSVARG-EPAEFPVN--GVIPGWIEALTLMPVGSKWELTI  175 (206)
T ss_pred             CCcEEEEEeCCCCCCCCCCCEEEEEEEEEECCC---CEEEeccCCC-CCeEEEee--chhhHHHHHHcCCCCCCEEEEEE
Confidence            389999999999999999999999999999887   9999999865 59999994  79999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus       176 P~~lA  180 (206)
T PRK11570        176 PHELA  180 (206)
T ss_pred             CHHHc
Confidence            99875

>KOG0549 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.86  E-value=2.4e-21  Score=120.93  Aligned_cols=79  Identities=41%  Similarity=0.707  Sum_probs=68.7

Q ss_pred             eEEEEeccCC-C-CCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            3 IEKQILTPGN-G-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         3 v~~~vl~~G~-g-~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      ++..++++=. . .+.+.||.+.+||++.+.||   ++||||+.++ +|+.|++|.+++++||+.+|++|++||++++.|
T Consensus        70 l~I~v~~~p~~C~~kak~GD~l~~HY~g~leDG---t~fdSS~~rg-~P~~f~LG~gqVIkG~Dqgl~gMCvGEkRkl~I  145 (188)
T KOG0549|consen   70 LQIGVLKKPEECPEKAKKGDTLHVHYTGSLEDG---TKFDSSYSRG-APFTFTLGTGQVIKGWDQGLLGMCVGEKRKLII  145 (188)
T ss_pred             eeEEEEECCccccccccCCCEEEEEEEEEecCC---CEEeeeccCC-CCEEEEeCCCceeccHhHHhhhhCcccceEEec
Confidence            3444444411 2 33899999999999999888   9999999977 599999999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus       146 Pp~Lg  150 (188)
T KOG0549|consen  146 PPHLG  150 (188)
T ss_pred             Ccccc
Confidence            99987

>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated

Probab=99.84  E-value=1.7e-20  Score=118.13  Aligned_cols=79  Identities=22%  Similarity=0.334  Sum_probs=72.0

Q ss_pred             CeEEEEecc--CCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034655            2 GIEKQILTP--GNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR   79 (88)
Q Consensus         2 Gv~~~vl~~--G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~   79 (88)
                      |++|+++..  |+|..|+.||.|.+||++++.||   ++|++++..  .|+.|.+|.+++++||+++|.+|++||+++|+
T Consensus        70 Gl~Y~v~~~~~g~g~~p~~gd~V~v~Y~~~~~dG---~v~~ss~~~--~P~~f~vg~~~vi~Gl~e~L~~Mk~Ge~~~~~  144 (177)
T TIGR03516        70 GFWYYYNQKDTGEGTTPEFGDLVTFEYDIRALDG---DVIYSEEEL--GPQTYKVDQQDLFSGLRDGLKLMKEGETATFL  144 (177)
T ss_pred             ccEEEEEEecCCCCCcCCCCCEEEEEEEEEeCCC---CEEEeCCCC--CCEEEEeCCcchhHHHHHHHcCCCCCCEEEEE
Confidence            788988865  66677999999999999999988   999999872  49999999999999999999999999999999


Q ss_pred             ECCCCC
Q 034655           80 TKPSSS   85 (88)
Q Consensus        80 ip~~~a   85 (88)
                      |||++|
T Consensus       145 iP~~~A  150 (177)
T TIGR03516       145 FPSHKA  150 (177)
T ss_pred             ECHHHc
Confidence            999876

Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.

>KOG0552 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.84  E-value=1.5e-20  Score=121.30  Aligned_cols=80  Identities=39%  Similarity=0.675  Sum_probs=75.0

Q ss_pred             CeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEE-EEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFT-FQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         2 Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~-~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      ||+|+.++-|+|..+..|+.|.+||.+++..+|  ++||+++.  .+|+. |.+|.+.+|+||+.++.+|++|++++|+|
T Consensus       121 Gl~y~D~~vG~G~~a~~G~rV~v~Y~Gkl~~~G--kvFd~~~~--~kp~~~f~lg~g~VIkG~d~gv~GMkvGGkRrviI  196 (226)
T KOG0552|consen  121 GLRYEDLRVGSGPSAKKGKRVSVRYIGKLKGNG--KVFDSNFG--GKPFKLFRLGSGEVIKGWDVGVEGMKVGGKRRVII  196 (226)
T ss_pred             CcEEEEEEecCCCCCCCCCEEEEEEEEEecCCC--eEeecccC--CCCccccccCCCCCCchHHHhhhhhccCCeeEEEe
Confidence            899999999999999999999999999998444  99999998  35888 99999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus       197 Pp~lg  201 (226)
T KOG0552|consen  197 PPELG  201 (226)
T ss_pred             Ccccc
Confidence            99987

>PRK10902 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.83  E-value=7.7e-20  Score=121.36  Aligned_cols=79  Identities=27%  Similarity=0.546  Sum_probs=72.9

Q ss_pred             CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      .|++|+++++|+|..|+.||.|.+||++++.||   ++|++++.++ .|+.|.+  +.++|||+++|.+|++|++++|+|
T Consensus       146 sGl~y~Vi~~G~G~~p~~gD~V~V~Y~g~l~dG---~vfdss~~~g-~p~~f~l--~~vipG~~EaL~~Mk~Gek~~l~I  219 (269)
T PRK10902        146 TGLLYKVEKEGTGEAPKDSDTVVVNYKGTLIDG---KEFDNSYTRG-EPLSFRL--DGVIPGWTEGLKNIKKGGKIKLVI  219 (269)
T ss_pred             CccEEEEEeCCCCCCCCCCCEEEEEEEEEeCCC---CEeeccccCC-CceEEec--CCcchHHHHHHhcCCCCcEEEEEE
Confidence            389999999999999999999999999999888   9999999865 5999998  579999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      |+++|
T Consensus       220 P~~la  224 (269)
T PRK10902        220 PPELA  224 (269)
T ss_pred             Cchhh
Confidence            99864

>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5

Probab=99.79  E-value=8.2e-19  Score=99.91  Aligned_cols=67  Identities=39%  Similarity=0.729  Sum_probs=61.9

Q ss_pred             CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034655           15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS   85 (88)
Q Consensus        15 ~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a   85 (88)
                      +|+.||.|.+||++++.++   +.|++++..+ +|+.|.+|.+++++||+++|.+|++||+++|.|||++|
T Consensus         4 ~~~~gd~V~i~y~~~~~~g---~~~~~~~~~~-~~~~~~~g~~~~i~g~e~al~~m~~Ge~~~~~vp~~~a   70 (94)
T PF00254_consen    4 TPKEGDTVTIHYTGRLEDG---KVFDSSYQEG-EPFEFRLGSGQVIPGLEEALIGMKVGEKREFYVPPELA   70 (94)
T ss_dssp             SBSTTSEEEEEEEEEETTS---EEEEETTTTT-SEEEEETTSSSSSHHHHHHHTTSBTTEEEEEEEEGGGT
T ss_pred             cCCCCCEEEEEEEEEECCC---cEEEEeeecC-cceeeeeccCccccchhhhcccccCCCEeeeEeCChhh
Confidence            3899999999999999866   9999997744 59999999999999999999999999999999999875

2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....

>PRK15095 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.74  E-value=8.6e-18  Score=104.05  Aligned_cols=67  Identities=27%  Similarity=0.496  Sum_probs=61.9

Q ss_pred             CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034655           15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS   85 (88)
Q Consensus        15 ~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a   85 (88)
                      .++.+|.|.+||++++.||   ++|++|+..+ +|+.|.+|.+++++||++||.+|++|+++.+.|||++|
T Consensus         4 ~i~~~~~V~v~Y~~~~~dG---~v~dst~~~~-~P~~f~~G~g~vi~gle~aL~gm~~Ge~~~v~ipp~~a   70 (156)
T PRK15095          4 SVQSNSAVLVHFTLKLDDG---STAESTRNNG-KPALFRLGDGSLSEGLEQQLLGLKVGDKKTFSLEPEAA   70 (156)
T ss_pred             ccCCCCEEEEEEEEEeCCC---CEEEECCCCC-CCEEEEeCCCCccHHHHHHHcCCCCCCEEEEEEChHHh
Confidence            4789999999999999777   9999998754 59999999999999999999999999999999999865

>COG1047 SlpA FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]

Probab=99.66  E-value=5.8e-16  Score=96.73  Aligned_cols=67  Identities=30%  Similarity=0.486  Sum_probs=61.8

Q ss_pred             CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034655           15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS   85 (88)
Q Consensus        15 ~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a   85 (88)
                      .++.||.|+++|++++.||   ++||+|.... .|+.|.+|.+++++|||+||.+|.+|++..+.|||+.|
T Consensus         2 ~i~k~~~V~i~Y~~~~~dg---~v~Dtt~e~~-~P~~~i~G~g~li~glE~al~g~~~Ge~~~V~IpPE~A   68 (174)
T COG1047           2 KIEKGDVVSLHYTLKVEDG---EVVDTTDENY-GPLTFIVGAGQLIPGLEEALLGKEVGEEFTVEIPPEDA   68 (174)
T ss_pred             cccCCCEEEEEEEEEecCC---cEEEcccccC-CCeEEEecCCCcchhHHHHHhCCCCCceeEEEeCchHh
Confidence            3688999999999999886   9999998733 59999999999999999999999999999999999876

>PRK10737 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.64  E-value=1.1e-15  Score=97.48  Aligned_cols=65  Identities=17%  Similarity=0.275  Sum_probs=60.3

Q ss_pred             CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034655           16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS   85 (88)
Q Consensus        16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a   85 (88)
                      ++.++.|+++|++++.+|   ++|++|+.  ..|+.|.+|.++++|+||+||.+|++|++.+|.|||+.|
T Consensus         3 I~~~~vV~l~Y~l~~~dG---~v~dst~~--~~Pl~~~~G~g~lipglE~aL~G~~~Gd~~~v~l~peeA   67 (196)
T PRK10737          3 VAKDLVVSLAYQVRTEDG---VLVDESPV--SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDA   67 (196)
T ss_pred             cCCCCEEEEEEEEEeCCC---CEEEecCC--CCCeEEEeCCCcchHHHHHHHcCCCCCCEEEEEEChHHh
Confidence            678999999999999777   99999986  369999999999999999999999999999999999865

>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.34  E-value=9.8e-12  Score=85.86  Aligned_cols=76  Identities=34%  Similarity=0.493  Sum_probs=66.5

Q ss_pred             CeEEEEeccCCC--CCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCC-CCccccHHHHhcCCCCCcEEEE
Q 034655            2 GIEKQILTPGNG--PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGK-GSVIKGWDEGVMGMQVGEVARL   78 (88)
Q Consensus         2 Gv~~~vl~~G~g--~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~-~~~~~g~~~al~~m~~G~~~~~   78 (88)
                      +|.++|+++|.|  ..|..|..|.+||.+++.+    .+|+++..    .+.|..|+ ..++.|++.||..|++||.+.|
T Consensus        85 ~iiKriir~G~gd~~~P~~g~~V~v~~~G~~~~----~~f~~~~~----~fe~~~Ge~~~vi~Gle~al~~M~~GE~a~v  156 (397)
T KOG0543|consen   85 GIIKRIIREGEGDYSRPNKGAVVKVHLEGELED----GVFDQREL----RFEFGEGEDIDVIEGLEIALRMMKVGEVALV  156 (397)
T ss_pred             ceEEeeeecCCCCCCCCCCCcEEEEEEEEEECC----cceecccc----ceEEecCCccchhHHHHHHHHhcCccceEEE
Confidence            688999999999  5599999999999999854    56776544    58888887 5899999999999999999999


Q ss_pred             EECCCCC
Q 034655           79 RTKPSSS   85 (88)
Q Consensus        79 ~ip~~~a   85 (88)
                      +|+|++|
T Consensus       157 ~i~~~Ya  163 (397)
T KOG0543|consen  157 TIDPKYA  163 (397)
T ss_pred             EeCcccc
Confidence            9999886

>TIGR00115 tig trigger factor

Probab=99.03  E-value=1.4e-09  Score=75.84  Aligned_cols=62  Identities=27%  Similarity=0.602  Sum_probs=55.6

Q ss_pred             CCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECC
Q 034655           14 PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKP   82 (88)
Q Consensus        14 ~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~   82 (88)
                      .+++.||.|.++|+++. +|   +.++++..   .++.|.+|.+.+++||+++|.||++|+++.|.+|.
T Consensus       145 ~~~~~gD~V~v~~~~~~-dg---~~~~~~~~---~~~~~~lg~~~~~~~~ee~L~G~k~Gd~~~~~v~~  206 (408)
T TIGR00115       145 RAAEKGDRVTIDFEGFI-DG---EAFEGGKA---ENFSLELGSGQFIPGFEEQLVGMKAGEEKEIKVTF  206 (408)
T ss_pred             cccCCCCEEEEEEEEEE-CC---EECcCCCC---CCeEEEECCCCcchhHHHHhCCCCCCCeeEEEecC
Confidence            45899999999999986 66   88988764   59999999999999999999999999999999874

Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.

>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]

Probab=99.02  E-value=1.2e-09  Score=77.08  Aligned_cols=62  Identities=26%  Similarity=0.550  Sum_probs=54.6

Q ss_pred             CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEE--EEECCCC
Q 034655           16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVAR--LRTKPSS   84 (88)
Q Consensus        16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~--~~ip~~~   84 (88)
                      ++.||.|+|+|.++. ||   ..|+....   +.+.+.+|+++++|||+++|.||++|++..  ++.|.++
T Consensus       158 a~~gD~v~IDf~g~i-Dg---~~fegg~a---e~~~l~lGs~~fipgFe~~LvG~k~Ge~k~i~vtFP~dy  221 (441)
T COG0544         158 AENGDRVTIDFEGSV-DG---EEFEGGKA---ENFSLELGSGRFIPGFEDQLVGMKAGEEKDIKVTFPEDY  221 (441)
T ss_pred             cccCCEEEEEEEEEE-cC---eeccCccc---cCeEEEEcCCCchhhHHhhhccCcCCCeeEEEEEccccc
Confidence            899999999999975 77   88887665   589999999999999999999999999977  5667665

>PRK01490 tig trigger factor; Provisional

Probab=98.98  E-value=3.8e-09  Score=74.27  Aligned_cols=61  Identities=28%  Similarity=0.583  Sum_probs=54.5

Q ss_pred             CCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEEC
Q 034655           14 PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTK   81 (88)
Q Consensus        14 ~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip   81 (88)
                      .+++.||.|.++|.++. +|   +.|+++..   .++.|.+|.+.+++||+++|.||++|+++.|.++
T Consensus       156 ~~~~~gD~V~vd~~~~~-~g---~~~~~~~~---~~~~~~lg~~~~~~~fee~L~G~k~Ge~~~~~~~  216 (435)
T PRK01490        156 RPAENGDRVTIDFVGSI-DG---EEFEGGKA---EDFSLELGSGRFIPGFEEQLVGMKAGEEKTIDVT  216 (435)
T ss_pred             ccCCCCCEEEEEEEEEE-CC---EECcCCCC---CceEEEEcCCCcchhHHHHhCCCCCCCeeEEEec
Confidence            45899999999999997 66   88887655   5899999999999999999999999999998775

>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=98.94  E-value=1.7e-09  Score=74.96  Aligned_cols=63  Identities=54%  Similarity=0.956  Sum_probs=57.5

Q ss_pred             ccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEE
Q 034655            9 TPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVA   76 (88)
Q Consensus         9 ~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~   76 (88)
                      ++|.|.. |..||.|.+||++++.||   +.||||.+ + .|+.|.+|.+.++.||..++..|+.|+..
T Consensus         1 ~eg~g~~~p~~g~~v~~hytg~l~dg---t~fdss~d-~-~~~~~~lg~g~vi~~~~~gv~tm~~g~~~   64 (397)
T KOG0543|consen    1 KEGTGTETPMTGDKVEVHYTGTLLDG---TKFDSSRD-G-DPFKFDLGKGSVIKGWDLGVATMKKGEAG   64 (397)
T ss_pred             CCCCCccCCCCCceeEEEEeEEecCC---eecccccC-C-CceeeecCCCccccccccccccccccccC
Confidence            4688877 999999999999999999   99999998 4 69999999999999999999999987653

>KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones]

Probab=98.58  E-value=1.8e-08  Score=66.74  Aligned_cols=79  Identities=25%  Similarity=0.421  Sum_probs=68.9

Q ss_pred             CeEEEEeccCCCCC--CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034655            2 GIEKQILTPGNGPK--PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR   79 (88)
Q Consensus         2 Gv~~~vl~~G~g~~--~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~   79 (88)
                      ||.++++..|+|+-  ..+|..|.+||.....+.. ++++|+|+..+ +|..+.+|..--++-||..|..|+++|.+.|.
T Consensus        11 gv~Kril~~G~g~l~e~~dGTrv~FHfrtl~~~e~-~tviDDsRk~g-kPmeiiiGkkFkL~VwE~il~tM~v~EvaqF~   88 (329)
T KOG0545|consen   11 GVKKRILHGGTGELPEFIDGTRVIFHFRTLKCDEE-RTVIDDSRKVG-KPMEIIIGKKFKLEVWEIILTTMRVHEVAQFW   88 (329)
T ss_pred             hhhHhhccCCCccCccccCCceEEEEEEecccCcc-cccccchhhcC-CCeEEeeccccccHHHHHHHHHHhhhhHHHhh
Confidence            78899999999976  6799999999999876542 26999999877 59999999888899999999999999998887


Q ss_pred             ECC
Q 034655           80 TKP   82 (88)
Q Consensus        80 ip~   82 (88)
                      |..
T Consensus        89 ~d~   91 (329)
T KOG0545|consen   89 CDT   91 (329)
T ss_pred             hhh
Confidence            753

>KOG0549 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=97.53  E-value=3.2e-05  Score=48.95  Aligned_cols=34  Identities=35%  Similarity=0.608  Sum_probs=31.3

Q ss_pred             EEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034655           52 FQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS   85 (88)
Q Consensus        52 ~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a   85 (88)
                      |++|.+.++++++.+|.+|..|+++++.+||+++
T Consensus         1 ~~~g~~~vi~gm~~~~~g~c~ge~rkvv~pp~l~   34 (188)
T KOG0549|consen    1 FTLGQGFVIPGMDQALEGMCNGEKRKVVIPPHLG   34 (188)
T ss_pred             CcccceEEecCHHHHhhhhhccccceeccCCccc
Confidence            3577889999999999999999999999999986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	88
4dz3_A	113	Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Is		7e-14
3uqb_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		9e-14
3uf8_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		9e-14
4ggq_C	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		9e-14
3vaw_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		9e-14
4dz2_A	113	Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Is		1e-13
2y78_A	133	Crystal Structure Of Bpss1823, A Mip-Like Chaperone		1e-13
2ke0_A	117	Solution Structure Of Peptidyl-Prolyl Cis-Trans Iso		1e-13
3uqa_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		1e-13
2lgo_A	130	Solution Nmr Structure Of A Fkbp-Type Peptidyl-Prol		9e-12
3h9r_B	109	Crystal Structure Of The Kinase Domain Of Type I Ac		8e-11
1tco_C	107	Ternary Complex Of A Calcineurin A Fragment, Calcin		9e-11
3o5e_A	144	Fk1 Domain Of Fkbp51, Crystal Form Vi Length = 144		2e-10
4drh_A	144	Co-crystal Structure Of The Ppiase Domain Of Fkbp51		3e-10
3o5g_A	128	Fk1 Domain Of Fkbp51, Crystal Form I Length = 128		3e-10
3o5l_A	128	Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form I Le		3e-10
3o5d_A	264	Crystal Structure Of A Fragment Of Fkbp51 Comprisin		3e-10
1kt0_A	457	Structure Of The Large Fkbp-like Protein, Fkbp51, I		4e-10
1c9h_A	107	Crystal Structure Of Fkbp12.6 In Complex With Rapam		4e-10
1bkf_A	107	Fk506 Binding Protein Fkbp Mutant R42kH87V COMPLEX		4e-10
2fap_A	107	The Structure Of The Immunophilin-Immunosuppressant		4e-10
1fkk_A	107	Atomic Structure Of Fkbp12, An Immunophilin Binding		7e-10
2ppp_A	107	Crystal Structure Of E60q Mutant Of Fkbp12 Length =		8e-10
2ppo_A	107	Crystal Structure Of E60a Mutant Of Fkbp12 Length =		9e-10
1kt1_A	457	Structure Of The Large Fkbp-Like Protein, Fkbp51, I		9e-10
3uqi_A	108	Crystallographic Structure Of Fkbp12 From Aedes Aeg		1e-09
1fkb_A	107	Atomic Structure Of The Rapamycin Human Immunophili		1e-09
1r9h_A	135	Structural Genomics Of C.Elegans: Fkbp-Type Peptidy		2e-09
2dg4_A	107	Fk506-Binding Protein Mutant Wf59 Complexed With Ra		2e-09
1eym_A	107	Fk506 Binding Protein Mutant, Homodimeric Complex L		2e-09
1bl4_A	107	Fkbp Mutant F36v Complexed With Remodeled Synthetic		3e-09
2dg9_A	107	Fk506-Binding Protein Mutant Wl59 Complexed With Ra		4e-09
1rot_A	149	Structure Of Fkbp59-I, The N-Terminal Domain Of A 5		5e-09
1yat_A	113	Improved Calcineurin Inhibition By Yeast Fkbp12-Dru		5e-09
1n1a_A	140	Crystal Structure Of The N-Terminal Domain Of Human		2e-08
4drj_A	144	O-crystal Structure Of The Ppiase Domain Of Fkbp52,		2e-08
1q1c_A	280	Crystal Structure Of N(1-260) Of Human Fkbp52 Lengt		2e-08
1u79_A	129	Crystal Structure Of Atfkbp13 Length = 129		9e-07
3jym_A	377	Crystal Structure Of The 3 Fkbp Domains Of Wheat Fk		1e-06
3jxv_A	356	Crystal Structure Of The 3 Fkbp Domains Of Wheat Fk		1e-06
1pbk_A	116	Homologous Domain Of Human Fkbp25 Length = 116		2e-06
3kz7_A	119	C-Terminal Domain Of Murine Fkbp25 Rapamycin Comple		2e-06
2pbc_A	102	Fk506-Binding Protein 2 Length = 102		6e-06
2ki3_A	126	Structural And Biochemical Characterization Of Fk50		1e-05
4dip_A	125	Crystal Structure Of Human Peptidyl-Prolyl Cis-Tran		4e-04
2vn1_A	129	Crystal Structure Of The Fk506-Binding Domain Of Pl		9e-04
2ofn_A	135	Solution Structure Of Fk506-Binding Domain (Fkbd)of		9e-04

>pdb|4DZ3|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation M61h From Burkholderia Pseudomallei Complexed With Fk506 Length = 113

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 2  GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
          G++ + LT G+G +  AGQ V+VH TG+  +G   QKF S+KD    PF F +G G VIK
Sbjct: 9  GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDR-NDPFAFVLGGGHVIK 64
Query: 62 GWDEGVMGMQVGEVARLRTKP 82
          GWDEGV GM+VG V RL   P
Sbjct: 65 GWDEGVQGMKVGGVRRLTIPP 85

>pdb|3UQB|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation D44g From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           G++ + LT G+G +  AGQ V+VH TG+  +G   QKF S+KD    PF F +G G VIK
Sbjct: 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFGSSKDR-NDPFAFVLGGGMVIK 160
Query: 62  GWDEGVMGMQVGEVARLRTKP 82
           GWDEGV GM+VG V RL   P
Sbjct: 161 GWDEGVQGMKVGGVRRLTIPP 181

>pdb|3UF8|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With A G95a Surface Mutation From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           G++ + LT G+G +  AGQ V+VH TG+  +G   QKF S+KD    PF F +G G VIK
Sbjct: 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDR-NDPFAFVLGGGMVIK 160
Query: 62  GWDEGVMGMQVGEVARLRTKP 82
           GWDEGV GM+VG V RL   P
Sbjct: 161 GWDEGVQGMKVGGVRRLTIPP 181

>pdb|4GGQ|C Chain C, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase From Burkholderia Pseudomallei Complexed With Cj40 Length = 209

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           G++ + LT G+G +  AGQ V+VH TG+  +G   QKF S+KD    PF F +G G VIK
Sbjct: 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDR-NDPFAFVLGGGMVIK 160
Query: 62  GWDEGVMGMQVGEVARLRTKP 82
           GWDEGV GM+VG V RL   P
Sbjct: 161 GWDEGVQGMKVGGVRRLTIPP 181

>pdb|3VAW|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation V3i From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           G++ + LT G+G +  AGQ V+VH TG+  +G   QKF S+KD    PF F +G G VIK
Sbjct: 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDR-NDPFAFVLGGGMVIK 160
Query: 62  GWDEGVMGMQVGEVARLRTKP 82
           GWDEGV GM+VG V RL   P
Sbjct: 161 GWDEGVQGMKVGGVRRLTIPP 181

>pdb|4DZ2|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation R92g From Burkholderia Pseudomallei Complexed With Fk506 Length = 113

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 2  GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
          G++ + LT G+G +  AGQ V+VH TG+  +G   QKF S+KD    PF F +G G VIK
Sbjct: 9  GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDR-NDPFAFVLGGGMVIK 64
Query: 62 GWDEGVMGMQVGEVARLRTKP 82
          GWDEGV GM+VG V RL   P
Sbjct: 65 GWDEGVQGMKVGGVRRLTIPP 85

>pdb|2Y78|A Chain A, Crystal Structure Of Bpss1823, A Mip-Like Chaperone From Burkholderia Pseudomallei Length = 133

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           G++ + LT G+G +  AGQ V+VH TG+  +G   QKF S+KD    PF F +G G VIK
Sbjct: 29  GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDR-NDPFAFVLGGGMVIK 84
Query: 62  GWDEGVMGMQVGEVARLRTKP 82
           GWDEGV GM+VG V RL   P
Sbjct: 85  GWDEGVQGMKVGGVRRLTIPP 105

>pdb|2KE0|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase From Burkholderia Pseudomallei Length = 117

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 2  GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
          G++ + LT G+G +  AGQ V+VH TG+  +G   QKF S+KD    PF F +G G VIK
Sbjct: 13 GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDR-NDPFAFVLGGGMVIK 68
Query: 62 GWDEGVMGMQVGEVARLRTKP 82
          GWDEGV GM+VG V RL   P
Sbjct: 69 GWDEGVQGMKVGGVRRLTIPP 89

>pdb|3UQA|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation A54e From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           G++ + LT G+G +  AGQ V+VH TG+  +G   QKF S+KD    PF F +G G VIK
Sbjct: 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDR-NDPFEFVLGGGMVIK 160
Query: 62  GWDEGVMGMQVGEVARLRTKP 82
           GWDEGV GM+VG V RL   P
Sbjct: 161 GWDEGVQGMKVGGVRRLTIPP 181

>pdb|2LGO|A Chain A, Solution Nmr Structure Of A Fkbp-Type Peptidyl-Prolyl Cis-Trans Isomerase From Giardia Lamblia, Seattle Structural Genomics Center For Infectious Disease Target Gilaa.00840.A Length = 130

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
Query: 3  IEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
          +EK++LTPG+G  KP AG+KVTVH  G   +G   ++F S++  G+ PF F +G G VIK
Sbjct: 26 LEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDG---KQFDSSRSRGK-PFQFTLGAGEVIK 81
Query: 62 GWDEGVMGMQVGEVA 76
          GWD+GV  M +GE A
Sbjct: 82 GWDQGVATMTLGEKA 96

>pdb|3H9R|B Chain B, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 109

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 1  MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSV 59
          MG++ + ++PG+G   P  GQ   VH TG  ++G   +KF S++D   +PF F +GK  V
Sbjct: 2  MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDR-NKPFKFMLGKQEV 57
Query: 60 IKGWDEGVMGMQVGEVARLRTKPSSS 85
          I+GW+EGV  M VG+ A+L   P  +
Sbjct: 58 IRGWEEGVAQMSVGQRAKLTISPDYA 83

>pdb|1TCO|C Chain C, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 107

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G++ + ++PG+G   P AGQ   VH TG  ++G   +KF S++D   +PF F +GK  VI
Sbjct: 1  GVQVETISPGDGRTFPKAGQTCVVHYTGMLEDG---KKFDSSRDR-NKPFKFMLGKQEVI 56
Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          +GW+EGV  M VG+ A+L   P  +
Sbjct: 57 RGWEEGVAQMSVGQRAKLTISPDYA 81

>pdb|3O5E|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vi Length = 144

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K +   GNG + P+ G KV VH  G   NG   +KF S+ D   +PF F +GKG VI
Sbjct: 36  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDR-NEPFVFSLGKGQVI 91
Query: 61  KGWDEGVMGMQVGEVARLRTKP 82
           K WD GV  M+ GE+  L  KP
Sbjct: 92  KAWDIGVATMKKGEICHLLCKP 113

>pdb|4DRH|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51, Rapamycin And The Frb Fragment Of Mtor At Low Ph Length = 144

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K +   GNG + P+ G KV VH  G   NG   +KF S+ D   +PF F +GKG VI
Sbjct: 36  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDR-NEPFVFSLGKGQVI 91
Query: 61  KGWDEGVMGMQVGEVARLRTKP 82
           K WD GV  M+ GE+  L  KP
Sbjct: 92  KAWDIGVATMKKGEICHLLCKP 113

>pdb|3O5G|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form I Length = 128

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K +   GNG + P+ G KV VH  G   NG   +KF S+ D   +PF F +GKG VI
Sbjct: 20  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDR-NEPFVFSLGKGQVI 75
Query: 61  KGWDEGVMGMQVGEVARLRTKPSSS 85
           K WD GV  M+ GE+  L  KP  +
Sbjct: 76  KAWDIGVATMKKGEICHLLCKPEYA 100

>pdb|3O5L|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form I Length = 128

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K +   GNG + P+ G KV VH  G   NG   +KF S+ D   +PF F +GKG VI
Sbjct: 20  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDR-NEPFVFSLGKGQVI 75
Query: 61  KGWDEGVMGMQVGEVARLRTKPSSS 85
           K WD GV  M+ GE+  L  KP  +
Sbjct: 76  KAWDIGVATMKKGEICHLLCKPEYA 100

>pdb|3O5D|A Chain A, Crystal Structure Of A Fragment Of Fkbp51 Comprising The Fk1 And Fk2 Domains Length = 264

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K +   GNG + P+ G KV VH  G   NG   +KF S+ D   +PF F +GKG VI
Sbjct: 36  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDR-NEPFVFSLGKGQVI 91
Query: 61  KGWDEGVMGMQVGEVARLRTKPSSS 85
           K WD GV  M+ GE+  L  KP  +
Sbjct: 92  KAWDIGVATMKKGEICHLLCKPEYA 116

>pdb|1KT0|A Chain A, Structure Of The Large Fkbp-like Protein, Fkbp51, Involved In Steroid Receptor Complexes Length = 457

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K +   GNG + P+ G KV VH  G   NG   +KF S+ D   +PF F +GKG VI
Sbjct: 32  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDR-NEPFVFSLGKGQVI 87
Query: 61  KGWDEGVMGMQVGEVARLRTKP 82
           K WD GV  M+ GE+  L  KP
Sbjct: 88  KAWDIGVATMKRGEICHLLCKP 109

>pdb|1C9H|A Chain A, Crystal Structure Of Fkbp12.6 In Complex With Rapamycin Length = 107

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G+E + ++PG+G   P  GQ   VH TG  +NG   +KF S++D   +PF F+IGK  VI
Sbjct: 1  GVEIETISPGDGRTFPKKGQTCVVHYTGMLQNG---KKFDSSRDR-NKPFKFRIGKQEVI 56
Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          KG++EG   M +G+ A+L   P  +
Sbjct: 57 KGFEEGAAQMSLGQRAKLTCTPDVA 81

>pdb|1BKF|A Chain A, Fk506 Binding Protein Fkbp Mutant R42kH87V COMPLEX WITH Immunosuppressant Fk506 Length = 107

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G++ + ++PG+G   P  GQ   VH TG  ++G   +KF S++D   +PF F +GK  VI
Sbjct: 1  GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDK-NKPFKFMLGKQEVI 56
Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          +GW+EGV  M VG+ A+L   P  +
Sbjct: 57 RGWEEGVAQMSVGQRAKLTISPDYA 81

>pdb|2FAP|A Chain A, The Structure Of The Immunophilin-Immunosuppressant Fkbp12- (C16)-Ethoxy Rapamycin Complex Interacting With Huma Length = 107

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G++ + ++PG+G   P  GQ   VH TG  ++G   +KF S++D   +PF F +GK  VI
Sbjct: 1  GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDR-NKPFKFMLGKQEVI 56
Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          +GW+EGV  M VG+ A+L   P  +
Sbjct: 57 RGWEEGVAQMSVGQRAKLTISPDYA 81

>pdb|1FKK|A Chain A, Atomic Structure Of Fkbp12, An Immunophilin Binding Protein Length = 107

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G++ + ++PG+G   P  GQ   VH TG  ++G   +KF S++D   +PF F +GK  VI
Sbjct: 1  GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDR-NKPFKFVLGKQEVI 56
Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          +GW+EGV  M VG+ A+L   P  +
Sbjct: 57 RGWEEGVAQMSVGQRAKLTISPDYA 81

>pdb|2PPP|A Chain A, Crystal Structure Of E60q Mutant Of Fkbp12 Length = 107

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G++ + ++PG+G   P  GQ   VH TG  ++G   +KF S++D   +PF F +GK  VI
Sbjct: 1  GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDR-NKPFKFMLGKQEVI 56
Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          +GW EGV  M VG+ A+L   P  +
Sbjct: 57 RGWQEGVAQMSVGQRAKLTISPDYA 81

>pdb|2PPO|A Chain A, Crystal Structure Of E60a Mutant Of Fkbp12 Length = 107

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G++ + ++PG+G   P  GQ   VH TG  ++G   +KF S++D   +PF F +GK  VI
Sbjct: 1  GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDR-NKPFKFMLGKQEVI 56
Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          +GW EGV  M VG+ A+L   P  +
Sbjct: 57 RGWAEGVAQMSVGQRAKLTISPDYA 81

>pdb|1KT1|A Chain A, Structure Of The Large Fkbp-Like Protein, Fkbp51, Involved In Steroid Receptor Complexes Length = 457

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K +   G+G + P+ G +V VH  G   NG   +KF S+ D   +PF F IGKG VI
Sbjct: 32  GVLKIVKRVGHGEETPMIGDRVYVHYNGKLANG---KKFDSSHDR-NEPFVFSIGKGQVI 87
Query: 61  KGWDEGVMGMQVGEVARLRTKP 82
           K WD GV  M+ GE+  L  KP
Sbjct: 88  KAWDIGVATMKKGEICHLLCKP 109

>pdb|3UQI|A Chain A, Crystallographic Structure Of Fkbp12 From Aedes Aegypti Length = 108

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 1  MGIEKQILTPGN-GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSV 59
          MG++   L  G+    P AGQ   VH TG   +G +   F S++  G+ PF F +G+G V
Sbjct: 1  MGVQVVTLAAGDEATYPKAGQVAVVHYTGTLADGKV---FDSSRTRGK-PFRFTVGRGEV 56
Query: 60 IKGWDEGVMGMQVGEVARLRTKPSSS 85
          I+GWDEGV  M VG+ A+L   P  +
Sbjct: 57 IRGWDEGVAQMSVGQRAKLVCSPDYA 82

>pdb|1FKB|A Chain A, Atomic Structure Of The Rapamycin Human Immunophilin Fkbp- 12 Complex Length = 107

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 3  IEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
          ++ + ++PG+G   P  GQ   VH TG  ++G   +KF S++D   +PF F +GK  VI+
Sbjct: 2  VQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRD-RNKPFKFMLGKQEVIR 57
Query: 62 GWDEGVMGMQVGEVARLRTKPSSS 85
          GW+EGV  M VG+ A+L   P  +
Sbjct: 58 GWEEGVAQMSVGQRAKLTISPDYA 81

>pdb|1R9H|A Chain A, Structural Genomics Of C.Elegans: Fkbp-Type Peptidylprolyl Isomerase Length = 135

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 2  GIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G+ K I   G G  KP  G  V VH  G  +NG    KF S++D G Q F+F +G+G+VI
Sbjct: 15 GVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENG---TKFDSSRDRGDQ-FSFNLGRGNVI 70
Query: 61 KGWDEGVMGMQVGEVARLRTK 81
          KGWD GV  M  GEVA    +
Sbjct: 71 KGWDLGVATMTKGEVAEFTIR 91

>pdb|2DG4|A Chain A, Fk506-Binding Protein Mutant Wf59 Complexed With Rapamycin Length = 107

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G++ + ++PG+G   P  GQ   VH TG  ++G   +KF S++D   +PF F +GK  VI
Sbjct: 1  GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDR-NKPFKFMLGKQEVI 56
Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          +G++EGV  M VG+ A+L   P  +
Sbjct: 57 RGFEEGVAQMSVGQRAKLTISPDYA 81

>pdb|1EYM|A Chain A, Fk506 Binding Protein Mutant, Homodimeric Complex Length = 107

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G++ + ++PG+G   P  GQ   VH TG  ++G   +K  S++D   +PF F +GK  VI
Sbjct: 1  GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKMDSSRDR-NKPFKFMLGKQEVI 56
Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          +GW+EGV  M VG+ A+L   P  +
Sbjct: 57 RGWEEGVAQMSVGQRAKLTISPDYA 81

>pdb|1BL4|A Chain A, Fkbp Mutant F36v Complexed With Remodeled Synthetic Ligand Length = 107

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G++ + ++PG+G   P  GQ   VH TG  ++G   +K  S++D   +PF F +GK  VI
Sbjct: 1  GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKVDSSRDR-NKPFKFMLGKQEVI 56
Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          +GW+EGV  M VG+ A+L   P  +
Sbjct: 57 RGWEEGVAQMSVGQRAKLTISPDYA 81

>pdb|2DG9|A Chain A, Fk506-Binding Protein Mutant Wl59 Complexed With Rapamycin Length = 107

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G++ + ++PG+G   P  GQ   VH TG  ++G   +KF S++D   +PF F +GK  VI
Sbjct: 1  GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDR-NKPFKFMLGKQEVI 56
Query: 61 KGWDEGVMGMQVGEVARLRTKPSSS 85
          +G +EGV  M VG+ A+L   P  +
Sbjct: 57 RGLEEGVAQMSVGQRAKLTISPDYA 81

>pdb|1ROT|A Chain A, Structure Of Fkbp59-I, The N-Terminal Domain Of A 59 Kda Fk506-Binding Protein, Nmr, Minimized Average Structure Length = 149

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K I   G G + P+ G +V VH TG+  +G    KF S+ D  +  F+F +GKG VI
Sbjct: 31  GVLKVIKREGTGTETPMIGDRVFVHYTGWLLDG---TKFDSSLD-RKDKFSFDLGKGEVI 86
Query: 61  KGWDEGVMGMQVGEVARLRTKPSSS 85
           K WD  V  M+VGE+ R+  KP  +
Sbjct: 87  KAWDIAVATMKVGELCRITCKPEYA 111

>pdb|1YAT|A Chain A, Improved Calcineurin Inhibition By Yeast Fkbp12-Drug Complexes. Crystallographic And Functional Analysis Length = 113

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 8  LTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEG 66
          ++PG+G   P  G  VT+H TG  +NG   QKF S+ D G  PF   IG G VIKGWD G
Sbjct: 13 ISPGDGATFPKTGDLVTIHYTGTLENG---QKFDSSVDRGS-PFQCNIGVGQVIKGWDVG 68
Query: 67 VMGMQVGEVARL 78
          +  + VGE ARL
Sbjct: 69 IPKLSVGEKARL 80

>pdb|1N1A|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human Fkbp52 Length = 140

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K I   G G + P+ G +V VH TG+  +G    KF S+ D  +  F+F +GKG VI
Sbjct: 32  GVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDG---TKFDSSLD-RKDKFSFDLGKGEVI 87
Query: 61  KGWDEGVMGMQVGEVARLRTKPSSS 85
           K WD  +  M+VGEV  +  KP  +
Sbjct: 88  KAWDIAIATMKVGEVCHITCKPEYA 112

>pdb|4DRJ|A Chain A, O-crystal Structure Of The Ppiase Domain Of Fkbp52, Rapamycin And The Frb Fragment Of Mtor Length = 144

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K I   G G + P+ G +V VH TG+  +G    KF S+ D  +  F+F +GKG VI
Sbjct: 36  GVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDG---TKFDSSLD-RKDKFSFDLGKGEVI 91
Query: 61  KGWDEGVMGMQVGEVARLRTKPSSS 85
           K WD  +  M+VGEV  +  KP  +
Sbjct: 92  KAWDIAIATMKVGEVCHITCKPEYA 116

>pdb|1Q1C|A Chain A, Crystal Structure Of N(1-260) Of Human Fkbp52 Length = 280

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K I   G G + P+ G +V VH TG+  +G    KF S+ D  +  F+F +GKG VI
Sbjct: 52  GVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDG---TKFDSSLDR-KDKFSFDLGKGEVI 107
Query: 61  KGWDEGVMGMQVGEVARLRTKPSSS 85
           K WD  +  M+VGEV  +  KP  +
Sbjct: 108 KAWDIAIATMKVGEVCHITCKPEYA 132

>pdb|1U79|A Chain A, Crystal Structure Of Atfkbp13 Length = 129

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 11 GNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMG 69
          G GP+ V GQ +  H  G  +NG +   F S+ + G+ P TF+IG G VIKGWD+G++G
Sbjct: 22 GYGPEAVKGQLIKAHYVGKLENGKV---FDSSYNRGK-PLTFRIGVGEVIKGWDQGILG 76

>pdb|3JYM|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73 Length = 377

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 3   IEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           I K++L    G  +P  G  VTV  TG  ++G +   F       Q+PF F+  + +VI+
Sbjct: 262 ILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTV---FLKKGHDEQEPFEFKTDEEAVIE 318
Query: 62  GWDEGVMGMQVGEVARLRTKPSSS 85
           G D  V+ M+ GEVA +   P  +
Sbjct: 319 GLDRAVLNMKKGEVALVTIPPEYA 342

>pdb|3JXV|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73 Length = 356

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 3   IEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           I K++L    G  +P  G  VTV  TG  ++G +   F       Q+PF F+  + +VI+
Sbjct: 246 ILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTV---FLKKGHDEQEPFEFKTDEEAVIE 302
Query: 62  GWDEGVMGMQVGEVARLRTKPSSS 85
           G D  V+ M+ GEVA +   P  +
Sbjct: 303 GLDRAVLNMKKGEVALVTIPPEYA 326

>pdb|1PBK|A Chain A, Homologous Domain Of Human Fkbp25 Length = 116

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 24 VHC--TGYGKNG---DLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARL 78
          VHC  TG  ++G   D + +  + K    +P +F++G G VI+GWDE ++ M  GE ARL
Sbjct: 23 VHCWYTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARL 82
Query: 79 RTKPS 83
            +P 
Sbjct: 83 EIEPE 87

>pdb|3KZ7|A Chain A, C-Terminal Domain Of Murine Fkbp25 Rapamycin Complex Length = 119

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 24 VHC--TGYGKNG---DLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARL 78
          VHC  TG   +G   D + +  S K    +P +F++G G VI+GWDE ++ M  GE ARL
Sbjct: 26 VHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARL 85
Query: 79 RTKPS 83
            +P 
Sbjct: 86 EIEPE 90

>pdb|2PBC|A Chain A, Fk506-Binding Protein 2 Length = 102

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGE 74
          K   G  + +H TG  ++G      + +  P  QPF F +G G VIKGWD+G++GM  GE
Sbjct: 5  KSRKGDVLHMHYTGKLEDG----TEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGE 60
Query: 75 VARL 78
            +L
Sbjct: 61 KRKL 64

>pdb|2KI3|A Chain A, Structural And Biochemical Characterization Of Fk506 Binding Domain From Plasmodium Vivax Length = 126

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2  GIEKQILTPGNGPK---PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS 58
          G+ K IL  G G +   P  G +VTVH  G  ++   S K + +      PF F +G+G 
Sbjct: 16 GVVKTILRKGEGGEENAPKKGNEVTVHYVGKLES---SGKVFDSSRERNVPFKFHLGQGE 72
Query: 59 VIKGWDEGVMGMQVGEVARLR 79
          VIKGWD  V  M   E   +R
Sbjct: 73 VIKGWDICVASMTKNEKCSVR 93

>pdb|4DIP|A Chain A, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans Isomerase Fkbp14 Length = 125

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 19 GQKVTVHCTGY-GKNGDLSQKFWST-KDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVA 76
          G  + VH  GY  K+G L   F ST K    QP  F +G    +KGWD+G+ GM VGE  
Sbjct: 32 GDLMLVHYEGYLEKDGSL---FHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKR 88
Query: 77 RLRTKPS 83
          +L   P+
Sbjct: 89 KLIIPPA 95

>pdb|2VN1|A Chain A, Crystal Structure Of The Fk506-Binding Domain Of Plasmodium Falciparum Fkbp35 In Complex With Fk506 Length = 129

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 2  GIEKQILTPGNGPK---PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS 58
          G+ K IL  G+  +   P  G +VTVH  G  ++   + K + +      PF F + +G 
Sbjct: 17 GVIKTILKKGDEGEENIPKKGNEVTVHYVGKLES---TGKVFDSSFDRNVPFKFHLEQGE 73
Query: 59 VIKGWDEGVMGMQVGEVARLRTKP 82
          VIKGWD  V  M+  E   +R + 
Sbjct: 74 VIKGWDICVSSMRKNEKCLVRIES 97

>pdb|2OFN|A Chain A, Solution Structure Of Fk506-Binding Domain (Fkbd)of Fkbp35 From Plasmodium Falciparum Length = 135

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 2  GIEKQILTPGNGPK---PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS 58
          G+ K IL  G+  +   P  G +VTVH  G  ++   + K + +      PF F + +G 
Sbjct: 17 GVIKTILKKGDEGEENIPKKGNEVTVHYVGKLES---TGKVFDSSFDRNVPFKFHLEQGE 73
Query: 59 VIKGWDEGVMGMQVGEVARLRTKP 82
          VIKGWD  V  M+  E   +R + 
Sbjct: 74 VIKGWDICVSSMRKNEKCLVRIES 97

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	88
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	3e-31
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	3e-30
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	5e-28
2ppn_A	107	FK506-binding protein 1A; high resolution protein	8e-28
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	2e-27
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	3e-27
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	1e-26
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	3e-26
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	3e-26
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	5e-14
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	4e-26
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	5e-26
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	5e-26
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	6e-26
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	5e-19
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	4e-16
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	7e-26
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	8e-26
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	1e-25
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	2e-25
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	4e-25
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	2e-13
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	1e-24
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	1e-24
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	1e-22
4dip_A	125	Peptidyl-prolyl CIS-trans isomerase FKBP14; struct	7e-21
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	4e-17
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	5e-17
1p5q_A	336	FKBP52, FK506-binding protein 4; isomerase; 2.80A	9e-17
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	2e-15
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	2e-15
1ix5_A	151	FKBP; ppiase, isomerase; NMR {Methanothermococcust	1e-09
4dt4_A	169	FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer;	3e-09
2k8i_A	171	SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase,	2e-08
2kr7_A	151	FKBP-type peptidyl-prolyl CIS-trans isomerase SLY;	7e-08
2kfw_A	196	FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD	1e-07
3pr9_A	157	FKBP-type peptidyl-prolyl CIS-trans isomerase; FKB	5e-07
3prb_A	231	FKBP-type peptidyl-prolyl CIS-trans isomerase; cha	6e-07
3cgm_A	158	SLYD, peptidyl-prolyl CIS-trans isomerase; chapero	1e-04

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} PDB: 1pbk_A* Length = 119

 Score =  104 bits (262), Expect = 3e-31
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 1  MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNG---DLSQKFWSTKDPGQQPFTFQIGK 56
              K IL  G+    P  G  V    TG   +G   D + +  S K    +P +F++G 
Sbjct: 4  PKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGV 63

Query: 57 GSVIKGWDEGVMGMQVGEVARLRTKP 82
          G VI+GWDE ++ M  GE ARL  +P
Sbjct: 64 GKVIRGWDEALLTMSKGEKARLEIEP 89

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens} Length = 134

 Score =  103 bits (258), Expect = 3e-30
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%)

Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           G+ K ++  G G        V V  +GY ++ D  + F S       P   ++G+   + 
Sbjct: 27  GVLKDVIREGAGDLVAPDASVLVKYSGYLEHMD--RPFDSNYFRKT-PRLMKLGEDITLW 83

Query: 62  GWDEGVMGMQVGEVARLRTKP 82
           G + G++ M+ GE+AR   KP
Sbjct: 84  GMELGLLSMRRGELARFLFKP 104

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana} Length = 180

 Score = 98.8 bits (246), Expect = 5e-28
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGK-GSVI 60
            + KQI+  G+G KP       +H   + KN     KF  T    Q P    +GK    +
Sbjct: 50  KVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQ--HKFEDTWHEQQ-PIELVLGKEKKEL 106

Query: 61  KGWDEGVMGMQVGEVARLRTKP 82
            G   GV  M+ GE A +    
Sbjct: 107 AGLAIGVASMKSGERALVHVGW 128

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ... Length = 107

 Score = 96.1 bits (240), Expect = 8e-28
 Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 5/82 (6%)

Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G++ + ++PG+G   P  GQ   VH TG  ++G   +KF S++D  + PF F +GK  VI
Sbjct: 1  GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDRNK-PFKFMLGKQEVI 56

Query: 61 KGWDEGVMGMQVGEVARLRTKP 82
          +GW+EGV  M VG+ A+L   P
Sbjct: 57 RGWEEGVAQMSVGQRAKLTISP 78

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A Length = 128

 Score = 95.8 bits (239), Expect = 2e-27
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 5/82 (6%)

Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G+ K +   GNG + P+ G KV VH  G   NG   +KF S+ D  + PF F +GKG VI
Sbjct: 20 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRNE-PFVFSLGKGQVI 75

Query: 61 KGWDEGVMGMQVGEVARLRTKP 82
          K WD GV  M+ GE+  L  KP
Sbjct: 76 KAWDIGVATMKKGEICHLLCKP 97

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A Length = 118

 Score = 95.0 bits (237), Expect = 3e-27
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 10/83 (12%)

Query: 2  GIEKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSV 59
           + K+ L PG     +PV GQ VTVH     +NG        T+   +    F +G   V
Sbjct: 14 LLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG--------TRVQEEPELVFTLGDCDV 65

Query: 60 IKGWDEGVMGMQVGEVARLRTKP 82
          I+  D  V  M VGE A +    
Sbjct: 66 IQALDLSVPLMDVGETAMVTADS 88

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 135

 Score = 93.5 bits (233), Expect = 1e-26
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 10/83 (12%)

Query: 2  GIEKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSV 59
           + K+ L PG     +PV GQ VTVH     +NG        T+   +    F +G   V
Sbjct: 18 LLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG--------TRVQEEPELVFTLGDCDV 69

Query: 60 IKGWDEGVMGMQVGEVARLRTKP 82
          I+  D  V  M VGE A +    
Sbjct: 70 IQALDLSVPLMDVGETAMVTADS 92

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens} Length = 157

 Score = 93.7 bits (233), Expect = 3e-26
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 10/83 (12%)

Query: 2   GIEKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSV 59
            + K+ L PG     +PV GQ VTVH     +NG        T+   +    F +G   V
Sbjct: 44  LLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG--------TRVQEEPELVFTLGDCDV 95

Query: 60  IKGWDEGVMGMQVGEVARLRTKP 82
           I+  D  V  M VGE A +    
Sbjct: 96  IQALDLSVPLMDVGETAMVTADS 118

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Length = 457

 Score = 98.6 bits (245), Expect = 3e-26
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 5/82 (6%)

Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K +   GNG + P+ G KV VH  G   NG   +KF S+ D  + PF F +GKG VI
Sbjct: 32  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRNE-PFVFSLGKGQVI 87

Query: 61  KGWDEGVMGMQVGEVARLRTKP 82
           K WD GV  M+ GE+  L  KP
Sbjct: 88  KAWDIGVATMKRGEICHLLCKP 109

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Length = 457

 Score = 64.7 bits (157), Expect = 5e-14
 Identities = 17/85 (20%), Positives = 26/85 (30%), Gaps = 13/85 (15%)

Query: 1   MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS-- 58
             I +          P  G  V +H  G        + F        +   F +G+G   
Sbjct: 147 GIIRRTKRKGEGYSNPNEGATVEIHLEGRCGG----RMFDC------RDVAFTVGEGEDH 196

Query: 59  -VIKGWDEGVMGMQVGEVARLRTKP 82
            +  G D+ +  MQ  E   L   P
Sbjct: 197 DIPIGIDKALEKMQREEQCILYLGP 221

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1 Length = 113

 Score = 91.9 bits (229), Expect = 4e-26
 Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 5/82 (6%)

Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           ++   ++PG+G   P  G  VT+H TG  +NG   QKF S+ D G  PF   IG G VI
Sbjct: 7  NVKIDRISPGDGATFPKTGDLVTIHYTGTLENG---QKFDSSVDRGS-PFQCNIGVGQVI 62

Query: 61 KGWDEGVMGMQVGEVARLRTKP 82
          KGWD G+  + VGE ARL    
Sbjct: 63 KGWDVGIPKLSVGEKARLTIPG 84

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1 Length = 135

 Score = 92.3 bits (230), Expect = 5e-26
 Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 2  GIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G+ K I   G G  KP  G  V VH  G  +NG    KF S++D G   F+F +G+G+VI
Sbjct: 15 GVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENG---TKFDSSRDRGD-QFSFNLGRGNVI 70

Query: 61 KGWDEGVMGMQVGEVARLRTKP 82
          KGWD GV  M  GEVA    + 
Sbjct: 71 KGWDLGVATMTKGEVAEFTIRS 92

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A Length = 129

 Score = 92.0 bits (229), Expect = 5e-26
 Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 8/85 (9%)

Query: 2  GIEKQILTPGN---GPKPVAGQKVTVHCTGY-GKNGDLSQKFWSTKDPGQQPFTFQIGKG 57
          G+ K IL  G+      P  G +VTVH  G     G   + F S+ D    PF F + +G
Sbjct: 17 GVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTG---KVFDSSFDRNV-PFKFHLEQG 72

Query: 58 SVIKGWDEGVMGMQVGEVARLRTKP 82
           VIKGWD  V  M+  E   +R + 
Sbjct: 73 EVIKGWDICVSSMRKNEKCLVRIES 97

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score = 96.8 bits (241), Expect = 6e-26
 Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 5/82 (6%)

Query: 2  GIEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G++K++L  G G   P  G +V VH TG   +G   +KF S++D     F F++G+G VI
Sbjct: 12 GLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDG---KKFDSSRDRDD-TFKFKLGQGQVI 67

Query: 61 KGWDEGVMGMQVGEVARLRTKP 82
          KGWD+G+  M+ GE A     P
Sbjct: 68 KGWDQGIKTMKKGENALFTIPP 89

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score = 78.3 bits (193), Expect = 5e-19
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 11  GNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGM 70
               +P  G  VTV  TG  ++G     F       Q+PF F+  + +VI+G D  V+ M
Sbjct: 255 EGYERPNEGAVVTVKITGKLQDG---TVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNM 311

Query: 71  QVGEVARLRTKP 82
           + GEVA +   P
Sbjct: 312 KKGEVALVTIPP 323

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score = 70.2 bits (172), Expect = 4e-16
 Identities = 15/79 (18%), Positives = 25/79 (31%), Gaps = 8/79 (10%)

Query: 4   EKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGW 63
           +K +        P    +V V      ++G        T     +   F +  G +    
Sbjct: 131 KKILKEGDKWENPKDPDEVFVKYEARLEDG--------TVVSKSEGVEFTVKDGHLCPAL 182

Query: 64  DEGVMGMQVGEVARLRTKP 82
            + V  M+ GE   L  KP
Sbjct: 183 AKAVKTMKKGEKVLLAVKP 201

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A* Length = 133

 Score = 91.9 bits (229), Expect = 7e-26
 Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 4/77 (5%)

Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           G++ + LT G+G +  AGQ V+VH TG+  +G   QKF S+KD    PF F +G G VIK
Sbjct: 29  GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDRND-PFAFVLGGGMVIK 84

Query: 62  GWDEGVMGMQVGEVARL 78
           GWDEGV GM+VG V RL
Sbjct: 85  GWDEGVQGMKVGGVRRL 101

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia} Length = 130

 Score = 91.5 bits (228), Expect = 8e-26
 Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 5/78 (6%)

Query: 2  GIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           +EK++LTPG+G  KP AG+KVTVH  G   +G   ++F S++  G+ PF F +G G VI
Sbjct: 25 QLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDG---KQFDSSRSRGK-PFQFTLGAGEVI 80

Query: 61 KGWDEGVMGMQVGEVARL 78
          KGWD+GV  M +GE A  
Sbjct: 81 KGWDQGVATMTLGEKALF 98

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 1euv_B 3v60_A 3v61_A 3v62_A* Length = 209

 Score = 93.3 bits (232), Expect = 1e-25
 Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 4/77 (5%)

Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           G++ + LT G+G +  AGQ V+VH TG+  +G   QKF S+KD    PF F +G G VIK
Sbjct: 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDRND-PFAFVLGGGMVIK 160

Query: 62  GWDEGVMGMQVGEVARL 78
           GWDEGV GM+VG V RL
Sbjct: 161 GWDEGVQGMKVGGVRRL 177

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A Length = 144

 Score = 90.9 bits (226), Expect = 2e-25
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 5/82 (6%)

Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K +   GNG + P+ G KV VH  G   NG   +KF S+ D  + PF F +GKG VI
Sbjct: 36  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRNE-PFVFSLGKGQVI 91

Query: 61  KGWDEGVMGMQVGEVARLRTKP 82
           K WD GV  M+ GE+  L  KP
Sbjct: 92  KAWDIGVATMKKGEICHLLCKP 113

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A Length = 280

 Score = 93.4 bits (232), Expect = 4e-25
 Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 5/82 (6%)

Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+ K I   G G + P+ G +V VH TG+  +G    KF S+ D     F+F +GKG VI
Sbjct: 52  GVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDG---TKFDSSLDRKD-KFSFDLGKGEVI 107

Query: 61  KGWDEGVMGMQVGEVARLRTKP 82
           K WD  +  M+VGEV  +  KP
Sbjct: 108 KAWDIAIATMKVGEVCHITCKP 129

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A Length = 280

 Score = 62.2 bits (151), Expect = 2e-13
 Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 13/85 (15%)

Query: 1   MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
             I +         KP  G  V V   GY K+    Q+             F+IG+G  +
Sbjct: 169 GIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQR----------ELRFEIGEGENL 218

Query: 61  K---GWDEGVMGMQVGEVARLRTKP 82
               G +  +  M+ GE + +  KP
Sbjct: 219 DLPYGLERAIQRMEKGEHSIVYLKP 243

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} Length = 338

 Score = 93.2 bits (231), Expect = 1e-24
 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGK-GSVI 60
            + KQI+  G+G KP       +H   + KN     KF  T    Q P    +GK    +
Sbjct: 50  KVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQ--HKFEDTWHEQQ-PIELVLGKEKKEL 106

Query: 61  KGWDEGVMGMQVGEVARLRTKPS 83
            G   GV  M+ GE A +     
Sbjct: 107 AGLAIGVASMKSGERALVHVGWE 129

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens} Length = 102

 Score = 87.6 bits (218), Expect = 1e-24
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 11 GNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGM 70
          G+  K   G  + +H TG  ++G    +F S+    Q PF F +G G VIKGWD+G++GM
Sbjct: 1  GSPIKSRKGDVLHMHYTGKLEDG---TEFDSSLPQNQ-PFVFSLGTGQVIKGWDQGLLGM 56

Query: 71 QVGEVARL 78
            GE  +L
Sbjct: 57 CEGEKRKL 64

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A Length = 129

 Score = 83.6 bits (207), Expect = 1e-22
 Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 10/83 (12%)

Query: 2  GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
          G+       G GP+ V GQ +  H  G  +NG   + F S+ + G+ P TF+IG G VIK
Sbjct: 13 GLAFCDKVVGYGPEAVKGQLIKAHYVGKLENG---KVFDSSYNRGK-PLTFRIGVGEVIK 68

Query: 62 GWDEGVMG------MQVGEVARL 78
          GWD+G++G      M  G    L
Sbjct: 69 GWDQGILGSDGIPPMLTGGKRTL 91

>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens} Length = 125

 Score = 78.9 bits (195), Expect = 7e-21
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 3  IEKQILTPGNGPKPVAGQKVTVHCTGY-GKNGDLSQKFWSTKDPGQ-QPFTFQIGKGSVI 60
          IE          K   G  + VH  GY  K+G     F ST      QP  F +G    +
Sbjct: 16 IEVLQKPFICHRKTKGGDLMLVHYEGYLEKDG---SLFHSTHKHNNGQPIWFTLGILEAL 72

Query: 61 KGWDEGVMGMQVGEVARL 78
          KGWD+G+ GM VGE  +L
Sbjct: 73 KGWDQGLKGMCVGEKRKL 90

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1 Length = 167

 Score = 70.1 bits (172), Expect = 4e-17
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 7/78 (8%)

Query: 2   GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           G+  Q +  G+G + P    K  VH TG  ++G     F S+++ G+ P TF+  +  VI
Sbjct: 38  GLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDG---TVFDSSRERGK-PTTFRPNE--VI 91

Query: 61  KGWDEGVMGMQVGEVARL 78
           KGW E +  M+ G+  RL
Sbjct: 92  KGWTEALQLMREGDRWRL 109

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A* Length = 213

 Score = 70.9 bits (174), Expect = 5e-17
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 6   QILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDE 65
           +++  GNG KP     VTV  TG   +G     F ST+  G+ P TFQ+    VI GW E
Sbjct: 111 KVINSGNGVKPGKSDTVTVEYTGRLIDG---TVFDSTEKTGK-PATFQVS--QVIPGWTE 164

Query: 66  GVMGMQVGEVARL 78
            +  M  G    +
Sbjct: 165 ALQLMPAGSTWEI 177

>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336

 Score = 71.8 bits (176), Expect = 9e-17
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 14/86 (16%)

Query: 2   GIEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS-- 58
           GI ++I T G G  KP  G  V V   GY K+    Q+             F+IG+G   
Sbjct: 26  GIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQR----------ELRFEIGEGENL 75

Query: 59  -VIKGWDEGVMGMQVGEVARLRTKPS 83
            +  G +  +  M+ GE + +  KPS
Sbjct: 76  DLPYGLERAIQRMEKGEHSIVYLKPS 101

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A Length = 224

 Score = 67.1 bits (164), Expect = 2e-15
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 6/73 (8%)

Query: 6   QILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDE 65
           Q++  G G  P     V V+  G   +G   ++F ++   G+ P +F++    VI GW E
Sbjct: 126 QVVEAGKGEAPKDSDTVVVNYKGTLIDG---KEFDNSYTRGE-PLSFRLD--GVIPGWTE 179

Query: 66  GVMGMQVGEVARL 78
           G+  ++ G   +L
Sbjct: 180 GLKNIKKGGKIKL 192

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} Length = 219

 Score = 66.7 bits (163), Expect = 2e-15
 Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 9/77 (11%)

Query: 2   GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
           GI    LTPG GPKP A  +V V   G   +G   + F  +     QP  F++    VI 
Sbjct: 118 GILMTELTPGTGPKPDANGRVEVRYVGRLPDG---KIFDQST----QPQWFRLDS--VIS 168

Query: 62  GWDEGVMGMQVGEVARL 78
           GW   +  M  G   RL
Sbjct: 169 GWTSALQNMPTGAKWRL 185

>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1 Length = 151

 Score = 50.4 bits (121), Expect = 1e-09
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 9/65 (13%)

Query: 19 GQKVTVHCTGYGKNGDL---------SQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMG 69
          G K+ V   G  ++GD+          +      D   +P  F +G+G +I+G++E V+ 
Sbjct: 5  GVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLD 64

Query: 70 MQVGE 74
          M+VG+
Sbjct: 65 MEVGD 69

>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli} Length = 169

 Score = 50.0 bits (120), Expect = 3e-09
 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 4/57 (7%)

Query: 18 AGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGE 74
          +   V VH T    +G       ST++ G+ P  F++G  S+ +G ++ ++G++VG+
Sbjct: 27 SNSAVLVHFTLKLDDGTT---AESTRNNGK-PALFRLGDASLSEGLEQHLLGLKVGD 79

>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli} Length = 171

 Score = 47.7 bits (114), Expect = 2e-08
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 19 GQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGE 74
             V++      ++G L      +  P   P  +  G GS+I G +  + G +VG+
Sbjct: 6  DLVVSLAYQVRTEDGVL---VDES--PVSAPLDYLHGHGSLISGLETALEGHEVGD 56

>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori} Length = 151

 Score = 45.7 bits (109), Expect = 7e-08
 Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 4/57 (7%)

Query: 18 AGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGE 74
            Q   +      +          +    ++P  F IG   +I G ++ V+  Q+GE
Sbjct: 9  IKQAALIEYEVREQGS---SIVLDSNI-SKEPLEFIIGTNQIIAGLEKAVLKAQIGE 61

>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli} Length = 196

 Score = 45.8 bits (109), Expect = 1e-07
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 19 GQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGE 74
             V++      ++G L      +  P   P  +  G GS+I G +  + G +VG+
Sbjct: 6  DLVVSLAYQVRTEDGVL---VDES--PVSAPLDYLHGHGSLISGLETALEGHEVGD 56

>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} PDB: 3pra_A Length = 157

 Score = 43.5 bits (103), Expect = 5e-07
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 8/64 (12%)

Query: 19 GQKVTVHCTGY--GKNGDLSQK------FWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGM 70
          G+ V +   GY  GK  D + +                P     G+G V+ G DE ++ M
Sbjct: 5  GKMVKISYDGYVDGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEM 64

Query: 71 QVGE 74
           VGE
Sbjct: 65 DVGE 68

>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A Length = 231

 Score = 44.0 bits (104), Expect = 6e-07
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 8/64 (12%)

Query: 19 GQKVTVHCTGY--GKNGDLSQK------FWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGM 70
          G+ V +   GY  GK  D + +                P     G+G V+ G DE ++ M
Sbjct: 5  GKMVKISYDGYVDGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEM 64

Query: 71 QVGE 74
           VGE
Sbjct: 65 DVGE 68

>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A* Length = 158

 Score = 37.2 bits (87), Expect = 1e-04
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 18/60 (30%)

Query: 19 GQKVTVHCTGYGKNGDLSQKFWSTKDPGQQ----PFTFQIGKGSVIKGWDEGVMGMQVGE 74
           + VT+  T               +  G+       ++  G  ++I G +E + G + GE
Sbjct: 6  DKVVTIRYTL--------------QVEGEVLDQGELSYLHGHRNLIPGLEEALEGREEGE 51

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	88
2lkn_A	165	AH receptor-interacting protein; FKBP-type domain,	99.92
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	99.91
2ppn_A	107	FK506-binding protein 1A; high resolution protein	99.91
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	99.9
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	99.9
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.89
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.89
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	99.89
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	99.89
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	99.88
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	99.88
4dip_A	125	Peptidyl-prolyl CIS-trans isomerase FKBP14; struct	99.88
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	99.88
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	99.87
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	99.86
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	99.86
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	99.86
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	99.85
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	99.85
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	99.85
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	99.85
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	99.85
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	99.83
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	99.82
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	99.82
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	99.81
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	99.81
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	99.79
3pr9_A	157	FKBP-type peptidyl-prolyl CIS-trans isomerase; FKB	99.76
1hxv_A	113	Trigger factor; FKBP fold, ppiase, chaperone; NMR	99.75
4dt4_A	169	FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer;	99.75
1ix5_A	151	FKBP; ppiase, isomerase; NMR {Methanothermococcust	99.75
2kr7_A	151	FKBP-type peptidyl-prolyl CIS-trans isomerase SLY;	99.74
2kfw_A	196	FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD	99.73
2k8i_A	171	SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase,	99.72
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	99.72
3prb_A	231	FKBP-type peptidyl-prolyl CIS-trans isomerase; cha	99.71
3cgm_A	158	SLYD, peptidyl-prolyl CIS-trans isomerase; chapero	99.63
1p5q_A	336	FKBP52, FK506-binding protein 4; isomerase; 2.80A	99.59
1w26_A	432	Trigger factor, TF; chaperone, protein folding, ri	99.41
1t11_A	392	Trigger factor, TF; helix-turn-helix, four-helix-b	99.31
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	99.23
3gty_X	433	Trigger factor, TF; chaperone-client complex, cell	98.36
3htx_A	950	HEN1; HEN1, small RNA methyltransferase, protein-R	83.7

>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}

Probab=99.92  E-value=6.6e-26  Score=140.36  Aligned_cols=82  Identities=24%  Similarity=0.390  Sum_probs=74.7

Q ss_pred             CCeEEEEeccCCCCC--CCCCCEEEEEEEEEEeC-CCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEE
Q 034655            1 MGIEKQILTPGNGPK--PVAGQKVTVHCTGYGKN-GDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVAR   77 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~--~~~gd~V~i~y~~~~~~-gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~   77 (88)
                      .||+|+++++|+|..  ++.||.|.+||++++.| +|  ++||||+.++ +|+.|.+|.+++|+||+++|.+|++|++++
T Consensus        10 ~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G--~~FDsS~~rg-~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~~   86 (165)
T 2lkn_A           10 DGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEG--TVLDDSRARG-KPMELIIGKKFKLPVWETIVCTMREGEIAQ   86 (165)
T ss_dssp             TSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSC--CEEEESTTTT-CCEEEESSSSCSCSHHHHHHTTCCTTCEEE
T ss_pred             CCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCc--cEEEecccCC-CCEEEEecCCCccHHHHHHHhcCccCceEE
Confidence            389999999999976  46899999999999865 33  9999999976 599999999999999999999999999999


Q ss_pred             EEECCCCC
Q 034655           78 LRTKPSSS   85 (88)
Q Consensus        78 ~~ip~~~a   85 (88)
                      |+|||++|
T Consensus        87 ~~ipp~la   94 (165)
T 2lkn_A           87 FLCDIKHV   94 (165)
T ss_dssp             EECCHHHH
T ss_pred             EEECHHHh
Confidence            99999875

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1

Probab=99.91  E-value=7.6e-24  Score=123.68  Aligned_cols=81  Identities=44%  Similarity=0.739  Sum_probs=75.5

Q ss_pred             CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034655            1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR   79 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~   79 (88)
                      +|++|+++++|+|.. ++.||.|.+||++++.||   ++|++++.++ +|+.|.+|.+++++||+++|.+|++|+++++.
T Consensus         6 ~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG---~~~d~s~~~~-~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~   81 (113)
T 1yat_A            6 GNVKIDRISPGDGATFPKTGDLVTIHYTGTLENG---QKFDSSVDRG-SPFQCNIGVGQVIKGWDVGIPKLSVGEKARLT   81 (113)
T ss_dssp             GGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTS---CEEEESTTTT-CCEEEETTSSSSCHHHHHHGGGCCTTCEEEEE
T ss_pred             CCeEEEEEECCCCcccCCCCCEEEEEEEEEECCC---CEEEecCCCC-CcEEEEeCCCCccHHHHHHHhCCCCCCEEEEE
Confidence            589999999999999 999999999999998777   9999998744 59999999999999999999999999999999


Q ss_pred             ECCCCC
Q 034655           80 TKPSSS   85 (88)
Q Consensus        80 ip~~~a   85 (88)
                      |||++|
T Consensus        82 ip~~~a   87 (113)
T 1yat_A           82 IPGPYA   87 (113)
T ss_dssp             ECGGGT
T ss_pred             ECHHHC
Confidence            999775

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...

Probab=99.91  E-value=4.2e-24  Score=123.60  Aligned_cols=80  Identities=43%  Similarity=0.841  Sum_probs=74.5

Q ss_pred             CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      |++|+++++|+|.. ++.||.|.+||++++.||   ++|++++.++ +|+.|.+|.+++++||+++|.+|++|+++++.|
T Consensus         1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG---~~~d~s~~~~-~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~i   76 (107)
T 2ppn_A            1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDRN-KPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTI   76 (107)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEE
T ss_pred             CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEE
Confidence            79999999999988 999999999999998777   9999998643 599999999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus        77 p~~~a   81 (107)
T 2ppn_A           77 SPDYA   81 (107)
T ss_dssp             CGGGT
T ss_pred             CHHHc
Confidence            99875

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*

Probab=99.90  E-value=2.6e-23  Score=122.33  Aligned_cols=81  Identities=35%  Similarity=0.621  Sum_probs=74.2

Q ss_pred             CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCC------CCccEEEEeCCCCccccHHHHhcCCCCCc
Q 034655            2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDP------GQQPFTFQIGKGSVIKGWDEGVMGMQVGE   74 (88)
Q Consensus         2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~------~~~p~~~~lG~~~~~~g~~~al~~m~~G~   74 (88)
                      |++|+++++|+|.. |+.||.|.+||++++.||   ++|++|+..      ..+|+.|.+|.+++++||+++|.+|++|+
T Consensus         5 g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG---~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge   81 (119)
T 3kz7_A            5 KYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDG---TVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE   81 (119)
T ss_dssp             SEEEEEEECCCSSCCCCTTCEEEEEEEEECTTS---CEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred             ccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCC---CEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence            79999999999965 999999999999998777   999999852      12599999999999999999999999999


Q ss_pred             EEEEEECCCCC
Q 034655           75 VARLRTKPSSS   85 (88)
Q Consensus        75 ~~~~~ip~~~a   85 (88)
                      +++|.|||++|
T Consensus        82 ~~~v~ip~~~a   92 (119)
T 3kz7_A           82 KARLEIEPEWA   92 (119)
T ss_dssp             EEEEEECGGGT
T ss_pred             EEEEEECcHHh
Confidence            99999999876

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*

Probab=99.90  E-value=3.7e-23  Score=124.12  Aligned_cols=81  Identities=52%  Similarity=0.858  Sum_probs=75.4

Q ss_pred             CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      .|++|+++++|+|..++.||.|.+||++++.||   ++|+++++++ +|+.|.+|.+++++||+++|.+|++||+++|.|
T Consensus        28 ~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~i  103 (133)
T 2y78_A           28 SGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDRN-DPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTI  103 (133)
T ss_dssp             TSCEEEEEECCSSCBCCTTSEEEEEEEEEETTS---CEEEETTTTT-CCEEEETTSSSSCHHHHHHSTTCBTTCEEEEEE
T ss_pred             CCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCC---CEEeccCcCC-CCEEEEeCCCChhHHHHHHHcCCCCCCEEEEEE
Confidence            489999999999999999999999999998777   9999998744 599999999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus       104 p~~~a  108 (133)
T 2y78_A          104 PPQLG  108 (133)
T ss_dssp             CGGGT
T ss_pred             CcHHh
Confidence            99876

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A

Probab=99.89  E-value=3.2e-23  Score=123.56  Aligned_cols=80  Identities=46%  Similarity=0.785  Sum_probs=74.3

Q ss_pred             CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      |++|+++++|+|.. |+.||.|.+||++++.||   ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus        20 gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i   95 (128)
T 3o5q_A           20 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC   95 (128)
T ss_dssp             SEEEEEEECCSSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEE
T ss_pred             CEEEEEEECCCCCccCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEECCCCccHHHHHHHhcCCCCCEEEEEE
Confidence            79999999999974 999999999999999887   9999997644 599999999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus        96 p~~~a  100 (128)
T 3o5q_A           96 KPEYA  100 (128)
T ss_dssp             CGGGT
T ss_pred             ChHHc
Confidence            99876

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A

Probab=99.89  E-value=4.9e-23  Score=124.99  Aligned_cols=80  Identities=46%  Similarity=0.781  Sum_probs=74.8

Q ss_pred             CeEEEEeccCCCC-CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            2 GIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         2 Gv~~~vl~~G~g~-~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      |++|+++++|+|. .|+.||.|.+||++++.||   ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++|+|
T Consensus        36 gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i  111 (144)
T 3o5e_A           36 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC  111 (144)
T ss_dssp             SEEEEEEECCBSSCCCCTTCEEEEEEEEECTTS---CEEEESGGGT-SCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEE
T ss_pred             eEEEEEEECCCCCccCCCCCEEEEEEEEEECCC---CEEEeecccC-CCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEE
Confidence            7999999999998 5999999999999998887   9999998754 599999999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus       112 pp~~a  116 (144)
T 3o5e_A          112 KPEYA  116 (144)
T ss_dssp             CGGGT
T ss_pred             ChHHC
Confidence            99876

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}

Probab=99.89  E-value=4.1e-23  Score=123.52  Aligned_cols=81  Identities=44%  Similarity=0.791  Sum_probs=74.9

Q ss_pred             CCeEEE--EeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEE
Q 034655            1 MGIEKQ--ILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVAR   77 (88)
Q Consensus         1 ~Gv~~~--vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~   77 (88)
                      +|++|+  ++++|+|.. ++.||.|.+||++++.||   ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++
T Consensus        22 ~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~   97 (130)
T 2lgo_A           22 MSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDG---KQFDSSRSRG-KPFQFTLGAGEVIKGWDQGVATMTLGEKAL   97 (130)
T ss_dssp             SSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTS---CEEECTTTTT-CCEEEETTSTTSCHHHHHHHHHSCTTEEEE
T ss_pred             CceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCC---CEEEccCcCC-CCEEEEeCCCCccHHHHHHHhCCCCCCEEE
Confidence            478888  999999999 999999999999998777   9999998754 599999999999999999999999999999


Q ss_pred             EEECCCCC
Q 034655           78 LRTKPSSS   85 (88)
Q Consensus        78 ~~ip~~~a   85 (88)
                      |.|||++|
T Consensus        98 v~ip~~~a  105 (130)
T 2lgo_A           98 FTIPYQLA  105 (130)
T ss_dssp             EEECTTTS
T ss_pred             EEECcHHH
Confidence            99999876

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1

Probab=99.89  E-value=6.8e-23  Score=123.18  Aligned_cols=81  Identities=44%  Similarity=0.754  Sum_probs=74.3

Q ss_pred             CCeEEEEeccCCCC-CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034655            1 MGIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR   79 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~-~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~   79 (88)
                      .|++|+++++|+|. .++.||.|.+||++++.||   ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++|.
T Consensus        14 ~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~   89 (135)
T 1r9h_A           14 GGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENG---TKFDSSRDRG-DQFSFNLGRGNVIKGWDLGVATMTKGEVAEFT   89 (135)
T ss_dssp             SSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTTTSSCHHHHHHHTTCCBTCEEEEE
T ss_pred             CcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCC---CEEEecCcCC-CCEEEEeCCCCccHHHHHHHhcCCCCCEEEEE
Confidence            48999999999997 5999999999999998777   9999998533 59999999999999999999999999999999


Q ss_pred             ECCCCC
Q 034655           80 TKPSSS   85 (88)
Q Consensus        80 ip~~~a   85 (88)
                      |||++|
T Consensus        90 ip~~~a   95 (135)
T 1r9h_A           90 IRSDYG   95 (135)
T ss_dssp             ECGGGT
T ss_pred             EChHHc
Confidence            999875

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}

Probab=99.88  E-value=2.5e-23  Score=124.95  Aligned_cols=82  Identities=27%  Similarity=0.422  Sum_probs=69.1

Q ss_pred             CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      .|++|+++++|+|..++.||.|.+||++++.++|  ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus        26 ~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G--~~fdss~~~~-~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v~i  102 (134)
T 3b7x_A           26 RGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMD--RPFDSNYFRK-TPRLMKLGEDITLWGMELGLLSMRRGELARFLF  102 (134)
T ss_dssp             SSEEEEEEECCEEEECCTTCEEEEEEEEECTTCS--SCSEEC--------CEEC-CCCCCHHHHHHHHTCEETCEEEEEE
T ss_pred             CCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCC--eEEEecCCCC-CCEEEEcCCcchhHHHHHHHhCCCCCCEEEEEE
Confidence            4899999999999999999999999999987433  9999998644 599999999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus       103 p~~~a  107 (134)
T 3b7x_A          103 KPNYA  107 (134)
T ss_dssp             CGGGT
T ss_pred             CHHHC
Confidence            99875

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}

Probab=99.88  E-value=3e-22  Score=125.47  Aligned_cols=82  Identities=29%  Similarity=0.410  Sum_probs=75.4

Q ss_pred             CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCC-CccccHHHHhcCCCCCcEEEEE
Q 034655            1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG-SVIKGWDEGVMGMQVGEVARLR   79 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~-~~~~g~~~al~~m~~G~~~~~~   79 (88)
                      .|++|+++++|+|..++.||.|.+||++++.++|  ++|++++..+ +|+.|.+|.+ ++++||+++|.+|++|++++|.
T Consensus        49 ~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG--~~fdss~~~~-~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~v~  125 (180)
T 2f4e_A           49 EKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQ--HKFEDTWHEQ-QPIELVLGKEKKELAGLAIGVASMKSGERALVH  125 (180)
T ss_dssp             TTEEEEEEECCBSCCBCTTCEEEEEEEEEETTTC--CEEEETTTTT-CCEEEETTSCCGGGHHHHHHHTTCCBTCEEEEE
T ss_pred             CceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCC--cEEeccCccC-CCEEEEeCCCCchhHHHHHHHhCCCCCCEEEEE
Confidence            3899999999999999999999999999997544  9999998754 5999999999 9999999999999999999999


Q ss_pred             ECCCCC
Q 034655           80 TKPSSS   85 (88)
Q Consensus        80 ip~~~a   85 (88)
                      |||++|
T Consensus       126 iPp~~a  131 (180)
T 2f4e_A          126 VGWELA  131 (180)
T ss_dssp             ECGGGT
T ss_pred             ECchHh
Confidence            999876

>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}

Probab=99.88  E-value=2.6e-22  Score=119.03  Aligned_cols=81  Identities=33%  Similarity=0.559  Sum_probs=73.7

Q ss_pred             CeEEEEeccCC--CCCCCCCCEEEEEEEEEEe-CCCceeeEeccCCC-CCccEEEEeCCCCccccHHHHhcCCCCCcEEE
Q 034655            2 GIEKQILTPGN--GPKPVAGQKVTVHCTGYGK-NGDLSQKFWSTKDP-GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVAR   77 (88)
Q Consensus         2 Gv~~~vl~~G~--g~~~~~gd~V~i~y~~~~~-~gg~~~~~~~t~~~-~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~   77 (88)
                      |++|+++++|+  |..++.||.|.+||++++. ||   ++|++++.. ..+|+.|.+|.+++++||+++|.+|++|++++
T Consensus        13 gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG---~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~~   89 (125)
T 4dip_A           13 EVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDG---SLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRK   89 (125)
T ss_dssp             CCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTC---CEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTCEEE
T ss_pred             CeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCC---cEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCCEEE
Confidence            78999999998  7779999999999999998 66   999999731 13599999999999999999999999999999


Q ss_pred             EEECCCCC
Q 034655           78 LRTKPSSS   85 (88)
Q Consensus        78 ~~ip~~~a   85 (88)
                      |.|||++|
T Consensus        90 ~~ip~~~a   97 (125)
T 4dip_A           90 LIIPPALG   97 (125)
T ss_dssp             EEECGGGT
T ss_pred             EEEChHHh
Confidence            99999876

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A

Probab=99.88  E-value=8.7e-23  Score=121.79  Aligned_cols=81  Identities=41%  Similarity=0.709  Sum_probs=74.8

Q ss_pred             CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcC------CCCCc
Q 034655            1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMG------MQVGE   74 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~------m~~G~   74 (88)
                      .|++|+++++|+|..++.||.|.+||++++.||   ++|++++.++ +|+.|.+|.+++++||+++|.+      |++|+
T Consensus        12 ~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~Ge   87 (129)
T 1u79_A           12 SGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENG---KVFDSSYNRG-KPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGG   87 (129)
T ss_dssp             TSCEEEEEECCSSCBCCTTCEEEEEEEEECTTS---CEEEEHHHHT-SCEEEETTSSSSCHHHHHHHHCBTTBCCCBTTC
T ss_pred             CCeEEEEEEcCCCCCCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEeCCCCccHHHHHHhcccccccccCCCC
Confidence            489999999999999999999999999998777   9999998533 5999999999999999999998      99999


Q ss_pred             EEEEEECCCCC
Q 034655           75 VARLRTKPSSS   85 (88)
Q Consensus        75 ~~~~~ip~~~a   85 (88)
                      ++++.|||++|
T Consensus        88 ~~~v~ip~~~a   98 (129)
T 1u79_A           88 KRTLRIPPELA   98 (129)
T ss_dssp             EEEEEECGGGT
T ss_pred             EEEEEEChHHc
Confidence            99999999876

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*

Probab=99.87  E-value=3.5e-22  Score=127.64  Aligned_cols=81  Identities=52%  Similarity=0.858  Sum_probs=76.0

Q ss_pred             CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      .|++|+++++|+|..|+.||.|.+||++++.||   ++|++++..+ +|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus       104 sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG---~~fdss~~~~-~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v~I  179 (209)
T 3uf8_A          104 SGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDRN-DPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTI  179 (209)
T ss_dssp             TSCEEEEEECCCSCBCCTTCEEEEEEEEEETTS---CEEEESGGGT-CCEEEETTSSSSCHHHHHHHTTCBTTCEEEEEE
T ss_pred             CceEEEEEEcCCCCcCCCCCEEEEEEEEEECCC---CEEEEccccC-CCEEEEeCCCccchhHHHHHhCCCCCCEEEEEE
Confidence            389999999999999999999999999999877   9999998754 599999999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus       180 pp~~a  184 (209)
T 3uf8_A          180 PPQLG  184 (209)
T ss_dssp             CGGGT
T ss_pred             CcHHh
Confidence            99876

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A

Probab=99.86  E-value=1.7e-21  Score=116.10  Aligned_cols=79  Identities=37%  Similarity=0.557  Sum_probs=70.0

Q ss_pred             eEEEEeccC---CCCCCCCCCEEEEEEEEEE-eCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEE
Q 034655            3 IEKQILTPG---NGPKPVAGQKVTVHCTGYG-KNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARL   78 (88)
Q Consensus         3 v~~~vl~~G---~g~~~~~gd~V~i~y~~~~-~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~   78 (88)
                      ++++++++|   +|..++.||.|.+||++++ .||   ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++|
T Consensus        18 ~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG---~~fd~s~~~~-~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~~v   93 (129)
T 2vn1_A           18 VIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTG---KVFDSSFDRN-VPFKFHLEQGEVIKGWDICVSSMRKNEKCLV   93 (129)
T ss_dssp             EEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTC---CEEEEGGGTT-CCEEEETTSSSSCHHHHHHHTTCCTTCEEEE
T ss_pred             EEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCC---eEEEecCCCC-ccEEEEeCCCCcCHHHHHHHhCCCCCCEEEE
Confidence            455788865   5677999999999999998 577   9999998644 5999999999999999999999999999999


Q ss_pred             EECCCCC
Q 034655           79 RTKPSSS   85 (88)
Q Consensus        79 ~ip~~~a   85 (88)
                      .|||++|
T Consensus        94 ~ip~~~a  100 (129)
T 2vn1_A           94 RIESMYG  100 (129)
T ss_dssp             EECGGGT
T ss_pred             EEChHHc
Confidence            9999875

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A

Probab=99.86  E-value=2.7e-21  Score=113.66  Aligned_cols=75  Identities=33%  Similarity=0.471  Sum_probs=70.0

Q ss_pred             eEEEEeccCCCC--CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            3 IEKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         3 v~~~vl~~G~g~--~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      ++|+++++|+|.  .++.||.|.+||++++.||   ++|+++     +|+.|.+|.+++++||+++|.+|++|+++++.|
T Consensus        15 ~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG---~~~ds~-----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~~~i   86 (118)
T 2awg_A           15 LRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG---TRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETAMVTA   86 (118)
T ss_dssp             EEEEEEECCCTTCCCCCTTSEEEEEEEEECTTS---CEEEEE-----EEEEEETTSSCSCHHHHHHGGGSCTTCEEEEEE
T ss_pred             EEEEEEEcCCCCCccCCCCCEEEEEEEEEECCC---CEEECC-----CCEEEEECCCChhHHHHHHHhCCCCCCEEEEEE
Confidence            899999999997  6999999999999998777   999973     599999999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus        87 p~~~a   91 (118)
T 2awg_A           87 DSKYC   91 (118)
T ss_dssp             CGGGT
T ss_pred             ChHHc
Confidence            99876

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1

Probab=99.86  E-value=4.3e-22  Score=123.51  Aligned_cols=79  Identities=34%  Similarity=0.537  Sum_probs=72.8

Q ss_pred             CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034655            1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR   79 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~   79 (88)
                      .|++|+++++|+|.. |+.||.|.+||++++.||   ++|++++.++ .|+.|.+  +++++||+++|.+|++|++++|+
T Consensus        37 sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG---~~fdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~~  110 (167)
T 1jvw_A           37 SGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDG---TVFDSSRERG-KPTTFRP--NEVIKGWTEALQLMREGDRWRLF  110 (167)
T ss_dssp             TSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTS---CEEEEHHHHT-SCEEECG--GGSCHHHHHHHTTCCTTCEEEEE
T ss_pred             CCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCC---CEEeeccccC-CCEEEEe--CchhHHHHHHHcCCCCCCEEEEE
Confidence            389999999999999 999999999999998787   9999998644 4999999  58999999999999999999999


Q ss_pred             ECCCCC
Q 034655           80 TKPSSS   85 (88)
Q Consensus        80 ip~~~a   85 (88)
                      |||++|
T Consensus       111 Ip~~la  116 (167)
T 1jvw_A          111 IPYDLA  116 (167)
T ss_dssp             ECGGGT
T ss_pred             ECchhh
Confidence            999876

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*

Probab=99.85  E-value=1.3e-21  Score=125.34  Aligned_cols=79  Identities=34%  Similarity=0.551  Sum_probs=73.1

Q ss_pred             CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      .|++|+++++|+|..|+.||.|.+||++++.||   ++|++++.++ .|+.|.+  +++++||+++|.+|++|++++|+|
T Consensus       106 sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG---~vfdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~I  179 (213)
T 1fd9_A          106 SGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDG---TVFDSTEKTG-KPATFQV--SQVIPGWTEALQLMPAGSTWEIYV  179 (213)
T ss_dssp             TSCEEEEEECCCSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHC-SCEEEEG--GGSCHHHHHHHTTCCTTCEEEEEE
T ss_pred             CccEEEEEecCCCccCCCCCEEEEEEEEEECCC---CEEeeccccC-CCEEEEc--CchhhHHHHHHcCCCCCCEEEEEE
Confidence            389999999999999999999999999998887   9999998644 5999999  589999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus       180 P~~la  184 (213)
T 1fd9_A          180 PSGLA  184 (213)
T ss_dssp             CGGGT
T ss_pred             Cchhc
Confidence            99875

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0

Probab=99.85  E-value=2.7e-21  Score=124.27  Aligned_cols=75  Identities=37%  Similarity=0.582  Sum_probs=70.9

Q ss_pred             CeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEEC
Q 034655            2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTK   81 (88)
Q Consensus         2 Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip   81 (88)
                      |++|+++++|+|..|..||.|.+||++++.||   ++||+| .   +|+.|.+|  ++++||+++|.+|++|++++|+||
T Consensus       118 Gl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG---~vfDss-~---~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~IP  188 (219)
T 3oe2_A          118 GILMTELTPGTGPKPDANGRVEVRYVGRLPDG---KIFDQS-T---QPQWFRLD--SVISGWTSALQNMPTGAKWRLVIP  188 (219)
T ss_dssp             GCEEEEEECCCSCCCCTTSEEEEEEEEECTTS---CEEEEC-S---SCEEEEGG--GSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred             CeEEEEEecCCCccCCCCCEEEEEEEEEECCC---CEeecc-C---CcEEEEec--chhHHHHHHHhCCCCCCEEEEEEC
Confidence            89999999999999999999999999998888   999999 2   59999996  899999999999999999999999


Q ss_pred             CCCC
Q 034655           82 PSSS   85 (88)
Q Consensus        82 ~~~a   85 (88)
                      |++|
T Consensus       189 p~lA  192 (219)
T 3oe2_A          189 SDQA  192 (219)
T ss_dssp             GGGT
T ss_pred             chhc
Confidence            9876

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A

Probab=99.85  E-value=3.8e-21  Score=123.98  Aligned_cols=78  Identities=28%  Similarity=0.588  Sum_probs=72.9

Q ss_pred             CeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEEC
Q 034655            2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTK   81 (88)
Q Consensus         2 Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip   81 (88)
                      |++|+++++|+|..|+.||.|.+||++++.||   ++|++++.++ .|+.|.+  +++++||+++|.+|++|++++|+||
T Consensus       122 Gl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG---~vfdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~IP  195 (224)
T 1q6h_A          122 GLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDG---KEFDNSYTRG-EPLSFRL--DGVIPGWTEGLKNIKKGGKIKLVIP  195 (224)
T ss_dssp             SCEEEEEECCSSCCCCTTCEEEEEEEEEETTS---CEEEEGGGGT-SCEEEEG--GGSCHHHHHHGGGSCTTCEEEEEEC
T ss_pred             ceEEEEEecccCccccCCCEEEEEEEEEeCCC---CEEeeccccC-CCEEEEc--CCcchhHHHHHcCCCCCCEEEEEEC
Confidence            89999999999999999999999999998888   9999998755 5999999  5899999999999999999999999


Q ss_pred             CCCC
Q 034655           82 PSSS   85 (88)
Q Consensus        82 ~~~a   85 (88)
                      |++|
T Consensus       196 ~~la  199 (224)
T 1q6h_A          196 PELA  199 (224)
T ss_dssp             GGGT
T ss_pred             chhh
Confidence            9875

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=99.85  E-value=8.8e-21  Score=125.60  Aligned_cols=81  Identities=42%  Similarity=0.731  Sum_probs=75.4

Q ss_pred             CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034655            1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR   79 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~   79 (88)
                      .|++|+++++|+|.. |+.||.|.+||++++.||   ++|++++.++ +|+.|.+|.+++++||++||.+|++|++++|+
T Consensus        51 ~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~  126 (280)
T 1q1c_A           51 EGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDG---TKFDSSLDRK-DKFSFDLGKGEVIKAWDIAIATMKVGEVCHIT  126 (280)
T ss_dssp             SSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTS---CEEEESTTSS-SCEEEETTTTSSCHHHHHHHTTCCTTCEEEEE
T ss_pred             CceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCC---CEEEecccCC-CCEEEEECCcChhHHHHHHHhcCCCCCEEEEE
Confidence            389999999999998 999999999999998777   9999998744 59999999999999999999999999999999


Q ss_pred             ECCCCC
Q 034655           80 TKPSSS   85 (88)
Q Consensus        80 ip~~~a   85 (88)
                      |||++|
T Consensus       127 ipp~~a  132 (280)
T 1q1c_A          127 CKPEYA  132 (280)
T ss_dssp             ECGGGT
T ss_pred             ECcHHh
Confidence            999875

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}

Probab=99.85  E-value=4.6e-21  Score=117.85  Aligned_cols=76  Identities=34%  Similarity=0.493  Sum_probs=70.4

Q ss_pred             Ce-EEEEeccCCCC--CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEE
Q 034655            2 GI-EKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARL   78 (88)
Q Consensus         2 Gv-~~~vl~~G~g~--~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~   78 (88)
                      |+ +|+++++|+|.  .|+.||.|.+||++++.||   ++|+++     +|+.|.+|.+++++||+++|.+|++|++++|
T Consensus        43 G~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG---~~fds~-----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~v  114 (157)
T 2jwx_A           43 GLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG---TRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETAMV  114 (157)
T ss_dssp             SSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTS---CEEEEE-----EEEEEETTTTSSCHHHHHHTTTSCTTCEEEE
T ss_pred             CCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCC---CEeecC-----CCEEEEeCCCChhHHHHHHHcCCCCCCEEEE
Confidence            54 79999999997  7999999999999998777   999983     5999999999999999999999999999999


Q ss_pred             EECCCCC
Q 034655           79 RTKPSSS   85 (88)
Q Consensus        79 ~ip~~~a   85 (88)
                      +|||++|
T Consensus       115 ~IP~~~a  121 (157)
T 2jwx_A          115 TADSKYC  121 (157)
T ss_dssp             EECGGGT
T ss_pred             EECchhc
Confidence            9999876

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.83  E-value=6e-21  Score=114.63  Aligned_cols=75  Identities=33%  Similarity=0.471  Sum_probs=69.5

Q ss_pred             eEEEEeccCCCC--CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            3 IEKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         3 v~~~vl~~G~g~--~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      ++|+++++|+|.  .++.||.|.+||++++.||   ++|+++     +|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus        19 l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG---~~fds~-----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~v~i   90 (135)
T 2d9f_A           19 LRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG---TRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETAMVTA   90 (135)
T ss_dssp             SEEEEEECCCSSCCCCCTTSEEEEEEEEEESSS---CEEEEE-----EEEEEETTSCCSCTTTTTTGGGSCTTCEEEEEE
T ss_pred             EEEEEEEcCCCCCccCCCCCEEEEEEEEEECCC---CEEecC-----CCEEEEeCCCChhHHHHHHHhCCCCCCEEEEEE
Confidence            899999999997  7999999999999998777   999972     599999999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus        91 p~~~a   95 (135)
T 2d9f_A           91 DSKYC   95 (135)
T ss_dssp             CHHHH
T ss_pred             ChhHc
Confidence            98654

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=99.82  E-value=1.7e-20  Score=129.90  Aligned_cols=81  Identities=46%  Similarity=0.767  Sum_probs=58.3

Q ss_pred             CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034655            1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR   79 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~   79 (88)
                      .|++|+++++|+|.. |+.||.|.+||++++.||   ++|++|+.++ +|+.|.+|.+++++||+++|.+|++|++++|+
T Consensus        31 ~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g---~~~dss~~~~-~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~  106 (457)
T 1kt0_A           31 RGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKRGEICHLL  106 (457)
T ss_dssp             --CEEEC--------CCCBTCEEEEEEEEEC--------CBC-------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEE
T ss_pred             CcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCC---CEEeccCCCC-CCeEEEeCCcchhhHHHHHHhhCCCCCEEEEE
Confidence            389999999999998 999999999999998777   9999998754 59999999999999999999999999999999


Q ss_pred             ECCCCC
Q 034655           80 TKPSSS   85 (88)
Q Consensus        80 ip~~~a   85 (88)
                      |||++|
T Consensus       107 i~~~~~  112 (457)
T 1kt0_A          107 CKPEYA  112 (457)
T ss_dssp             ECGGGT
T ss_pred             EChHHh
Confidence            999865

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}

Probab=99.82  E-value=1.7e-20  Score=125.61  Aligned_cols=82  Identities=29%  Similarity=0.410  Sum_probs=74.7

Q ss_pred             CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCC-CccccHHHHhcCCCCCcEEEEE
Q 034655            1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG-SVIKGWDEGVMGMQVGEVARLR   79 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~-~~~~g~~~al~~m~~G~~~~~~   79 (88)
                      .|+.++++++|+|..|+.||.|.|||++++.++|  ++|++++..+ +|+.|.+|.+ ++++||+++|.+|++||+++|+
T Consensus        49 ~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g--~~fd~~~~~~-~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~  125 (338)
T 2if4_A           49 EKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQ--HKFEDTWHEQ-QPIELVLGKEKKELAGLAIGVASMKSGERALVH  125 (338)
T ss_dssp             TTEEEEEEECCBSCCCCTTCEEEEEEEEEETTTC--CCCEEHHHHT-CCEEEETTSCCGGGHHHHHHHHHCCBTCEEEEE
T ss_pred             CCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCC--cEeecccCCC-CCeEEEcCCCCcccHHHHHHHhcCCCCCeEEEE
Confidence            3799999999999999999999999999998644  9999997644 5999999998 8999999999999999999999


Q ss_pred             ECCCCC
Q 034655           80 TKPSSS   85 (88)
Q Consensus        80 ip~~~a   85 (88)
                      |||++|
T Consensus       126 i~~~~~  131 (338)
T 2if4_A          126 VGWELA  131 (338)
T ss_dssp             ECGGGS
T ss_pred             ECHHHh
Confidence            998765

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}

Probab=99.81  E-value=7e-20  Score=105.03  Aligned_cols=69  Identities=38%  Similarity=0.652  Sum_probs=62.9

Q ss_pred             CCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034655           13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS   85 (88)
Q Consensus        13 g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a   85 (88)
                      |..++.||.|.+||++++.||   ++|++++.++ +|+.|.+|.+++++||+++|.+|++|+++++.|||++|
T Consensus         3 g~~~~~gd~V~v~y~~~~~dG---~~~d~s~~~~-~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~a   71 (102)
T 2pbc_A            3 PIKSRKGDVLHMHYTGKLEDG---TEFDSSLPQN-QPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELG   71 (102)
T ss_dssp             CCCCCTTCEEEEEEEEECTTS---CEEEESTTTT-CCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGT
T ss_pred             CCcCCCCCEEEEEEEEEECCC---CEEEeCCCCC-CCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHC
Confidence            456999999999999998677   9999998644 59999999999999999999999999999999999875

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=99.81  E-value=1.5e-19  Score=122.83  Aligned_cols=81  Identities=35%  Similarity=0.557  Sum_probs=73.9

Q ss_pred             CeEEEEeccCCC-CCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            2 GIEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         2 Gv~~~vl~~G~g-~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      +++++++++|+| ..|+.||.|.+||++++.||   ++|+++.....+|+.|.+|.+++++||+++|.+|++||+++|+|
T Consensus       245 ~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG---~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~i  321 (356)
T 3jxv_A          245 KILKKVLKEXEGYERPNEGAVVTVKITGKLQDG---TVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTI  321 (356)
T ss_dssp             CEEEEEEECCBSSCCCCTTCEEEEEEEEEESSS---CEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEE
T ss_pred             ceeEEeeecccccCCCCCCCEEEEEEEEEECCC---CEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEE
Confidence            689999999999 56999999999999999888   99998853334699999999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus       322 p~~~a  326 (356)
T 3jxv_A          322 PPEYA  326 (356)
T ss_dssp             CGGGT
T ss_pred             ChHHc
Confidence            99876

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=99.79  E-value=7.4e-21  Score=129.20  Aligned_cols=81  Identities=41%  Similarity=0.766  Sum_probs=0.0

Q ss_pred             CCeEEEEeccCCC-CCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034655            1 MGIEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR   79 (88)
Q Consensus         1 ~Gv~~~vl~~G~g-~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~   79 (88)
                      .|++|+++++|+| ..|+.||.|.+||++++.||   ++|++|+.++ +|+.|.+|.+++++||+++|.+|++|++++++
T Consensus        11 ~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~~~lG~g~~i~g~e~~l~gm~~Ge~~~~~   86 (356)
T 3jxv_A           11 QGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDG---KKFDSSRDRD-DTFKFKLGQGQVIKGWDQGIKTMKKGENALFT   86 (356)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCeEEEEEEeecCCccCCCCCEEEEEEEEEECCC---CEEEEcccCC-CcEEEEeCCCccchHHHHHHhcCCCCCEEEEE
Confidence            4899999999999 45999999999999999888   9999999754 59999999999999999999999999999999


Q ss_pred             ECCCCC
Q 034655           80 TKPSSS   85 (88)
Q Consensus        80 ip~~~a   85 (88)
                      |||++|
T Consensus        87 ip~~~a   92 (356)
T 3jxv_A           87 IPPELA   92 (356)
T ss_dssp             ------
T ss_pred             EChHHh
Confidence            999876

>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A

Probab=99.76  E-value=1.7e-18  Score=106.41  Aligned_cols=66  Identities=29%  Similarity=0.500  Sum_probs=60.1

Q ss_pred             CCCCCEEEEEEEEEEeCCCceeeEeccCCC------------CCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCC
Q 034655           16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDP------------GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPS   83 (88)
Q Consensus        16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~------------~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~   83 (88)
                      ++.||.|.+||++++ ||   ++||+|+..            ..+|+.|.+|.+++++||++||.+|++|+++++.|||+
T Consensus         2 i~~Gd~V~v~Y~g~l-dG---~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~   77 (157)
T 3pr9_A            2 VEKGKMVKISYDGYV-DG---KLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPE   77 (157)
T ss_dssp             CCTTCEEEEEEEEEE-TT---EEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGG
T ss_pred             CCCCCEEEEEEEEEE-CC---EEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcH
Confidence            688999999999999 77   999999752            12599999999999999999999999999999999998


Q ss_pred             CC
Q 034655           84 SS   85 (88)
Q Consensus        84 ~a   85 (88)
                      +|
T Consensus        78 ~a   79 (157)
T 3pr9_A           78 KA   79 (157)
T ss_dssp             GT
T ss_pred             Hh
Confidence            76

>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1

Probab=99.75  E-value=3.9e-18  Score=99.74  Aligned_cols=65  Identities=26%  Similarity=0.433  Sum_probs=58.0

Q ss_pred             CCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE--CCCC
Q 034655           13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT--KPSS   84 (88)
Q Consensus        13 g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i--p~~~   84 (88)
                      +.+++.||.|.++|++++ ||   ++|++++.   +|+.|.+|.++++|||+++|.+|++|++++|.|  |+++
T Consensus        27 ~~~~~~gD~V~v~Y~g~~-dG---~~fdss~~---~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Y   93 (113)
T 1hxv_A           27 DKKLANGDIAIIDFTGIV-DN---KKLASASA---QNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDY   93 (113)
T ss_dssp             --CCCSSEEEEEEEEEEE-TT---EECSTTCC---SEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTS
T ss_pred             CCCCCCCCEEEEEEEEEE-CC---EEcccCCc---cCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhh
Confidence            557999999999999998 77   99999964   699999999999999999999999999999999  5544

>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}

Probab=99.75  E-value=2e-18  Score=107.20  Aligned_cols=67  Identities=25%  Similarity=0.469  Sum_probs=61.8

Q ss_pred             CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034655           15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS   85 (88)
Q Consensus        15 ~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a   85 (88)
                      .++.||.|.+||++++.||   ++||+|+..+ +|+.|.+|.+++++||+++|.+|++|++++|.|||++|
T Consensus        24 ~i~~gd~V~v~Y~g~l~dG---~vfDss~~~~-~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~A   90 (169)
T 4dt4_A           24 SVQSNSAVLVHFTLKLDDG---TTAESTRNNG-KPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAA   90 (169)
T ss_dssp             SCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGT
T ss_pred             cCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHh
Confidence            5899999999999998777   9999998643 59999999999999999999999999999999999876

>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1

Probab=99.75  E-value=1e-18  Score=106.72  Aligned_cols=67  Identities=25%  Similarity=0.525  Sum_probs=60.6

Q ss_pred             CCCCCEEEEEEEEEEeCCCceeeEeccCC------------CCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCC
Q 034655           16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKD------------PGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPS   83 (88)
Q Consensus        16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~------------~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~   83 (88)
                      ++.||.|.+||++++.+|   ++|++|+.            ++.+|+.|.+|.+++++||+++|.+|++|+++++.|||+
T Consensus         2 i~~gd~V~v~Y~g~~~dG---~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~   78 (151)
T 1ix5_A            2 VDKGVKIKVDYIGKLESG---DVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAE   78 (151)
T ss_dssp             CCTTCEEEECCEECCTTS---CCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTT
T ss_pred             CCCCCEEEEEEEEEECCC---CEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcH
Confidence            678999999999998666   99999963            233599999999999999999999999999999999998


Q ss_pred             CC
Q 034655           84 SS   85 (88)
Q Consensus        84 ~a   85 (88)
                      +|
T Consensus        79 ~a   80 (151)
T 1ix5_A           79 KA   80 (151)
T ss_dssp             TS
T ss_pred             HH
Confidence            76

>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}

Probab=99.74  E-value=1.2e-17  Score=102.01  Aligned_cols=67  Identities=19%  Similarity=0.306  Sum_probs=61.4

Q ss_pred             CCCCCCCEEEEEEEEEEe-CCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034655           14 PKPVAGQKVTVHCTGYGK-NGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS   85 (88)
Q Consensus        14 ~~~~~gd~V~i~y~~~~~-~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a   85 (88)
                      .+++.||.|++||++++. +|   ++|++|+.  .+|+.|.+|.+++++||+++|.+|++|+++++.|||++|
T Consensus         5 ~~i~~gd~V~v~Y~g~~~~dG---~~fdss~~--~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~a   72 (151)
T 2kr7_A            5 DLESIKQAALIEYEVREQGSS---IVLDSNIS--KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEA   72 (151)
T ss_dssp             CCTTSCCEEEEEEEEEESSCS---CEEEESTT--TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGT
T ss_pred             cCCCCCCEEEEEEEEEECCCC---CEEEeCCC--CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHH
Confidence            458899999999999986 66   99999986  259999999999999999999999999999999999875

>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}

Probab=99.73  E-value=1.8e-17  Score=104.95  Aligned_cols=65  Identities=17%  Similarity=0.276  Sum_probs=60.5

Q ss_pred             CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034655           16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS   85 (88)
Q Consensus        16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a   85 (88)
                      ++.+|.|+++|++++.+|   ++|++|+..  +|+.|.+|.++++|+|+++|.+|++|++++|.|||++|
T Consensus         3 i~~gd~V~v~Y~g~~~dG---~~fdss~~~--~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~a   67 (196)
T 2kfw_A            3 VAKDLVVSLAYQVRTEDG---VLVDESPVS--APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDA   67 (196)
T ss_dssp             CCSSCEEEEEEEEEETTT---EEEEECCTT--SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTT
T ss_pred             CCCCCEEEEEEEEEECCC---CEEEecCCC--CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHh
Confidence            688999999999997676   999999873  59999999999999999999999999999999999876

>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}

Probab=99.72  E-value=2.4e-17  Score=102.51  Aligned_cols=65  Identities=17%  Similarity=0.276  Sum_probs=60.3

Q ss_pred             CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034655           16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS   85 (88)
Q Consensus        16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a   85 (88)
                      ++.||.|+++|++++.+|   ++|++|+..  +|+.|.+|.++++|||+++|.+|++|++++|.|||++|
T Consensus         3 i~~gd~V~v~Y~g~~~dG---~~fdss~~~--~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~a   67 (171)
T 2k8i_A            3 VAKDLVVSLAYQVRTEDG---VLVDESPVS--APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDA   67 (171)
T ss_dssp             CCTTEEEEEEEEEEETTS---CEEEECCSS--SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTS
T ss_pred             CCCCCEEEEEEEEEECCC---CEEeeccCC--cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHh
Confidence            678999999999997777   999999862  59999999999999999999999999999999999875

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=99.72  E-value=5.1e-17  Score=107.57  Aligned_cols=75  Identities=32%  Similarity=0.489  Sum_probs=68.7

Q ss_pred             CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCC---ccccHHHHhcCCCCCcEE
Q 034655            1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS---VIKGWDEGVMGMQVGEVA   76 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~---~~~g~~~al~~m~~G~~~   76 (88)
                      .|++++++++|+|.. ++.||.|.+||++++ +|   ++|++      +|+.|.+|.++   +++||+++|.+|++||++
T Consensus       168 ~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG---~~fd~------~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~  237 (280)
T 1q1c_A          168 GGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KD---KLFDQ------RELRFEIGEGENLDLPYGLERAIQRMEKGEHS  237 (280)
T ss_dssp             SSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TT---EEEEE------EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEE
T ss_pred             cceeEEeeecccccccccCCceEEEEEEEEe-CC---EEEec------CCeEEEecCCcccccchhHHHHHhCCCCCcEE
Confidence            378999999999985 999999999999998 77   99997      38999999987   599999999999999999


Q ss_pred             EEEECCCCC
Q 034655           77 RLRTKPSSS   85 (88)
Q Consensus        77 ~~~ip~~~a   85 (88)
                      +|.|||++|
T Consensus       238 ~v~ip~~~~  246 (280)
T 1q1c_A          238 IVYLKPSYA  246 (280)
T ss_dssp             EEEECGGGT
T ss_pred             EEEEChhHc
Confidence            999999865

>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A

Probab=99.71  E-value=2.4e-17  Score=106.60  Aligned_cols=66  Identities=29%  Similarity=0.500  Sum_probs=60.0

Q ss_pred             CCCCCEEEEEEEEEEeCCCceeeEeccCCC------------CCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCC
Q 034655           16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDP------------GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPS   83 (88)
Q Consensus        16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~------------~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~   83 (88)
                      ++.||.|.+||++++ ||   ++||+|+..            .++|+.|.+|.+++++||++||.+|++|+++++.|||+
T Consensus         2 i~~Gd~V~v~Y~g~l-dG---~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe   77 (231)
T 3prb_A            2 VEKGKMVKISYDGYV-DG---KLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPE   77 (231)
T ss_dssp             CCTTCEEEEEEEEEE-TT---EEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGG
T ss_pred             CCCCCEEEEEEEEEE-CC---EEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcH
Confidence            678999999999999 77   999999852            12599999999999999999999999999999999998


Q ss_pred             CC
Q 034655           84 SS   85 (88)
Q Consensus        84 ~a   85 (88)
                      +|
T Consensus        78 ~A   79 (231)
T 3prb_A           78 KA   79 (231)
T ss_dssp             GT
T ss_pred             Hh
Confidence            76

>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*

Probab=99.63  E-value=7.2e-16  Score=94.74  Aligned_cols=60  Identities=18%  Similarity=0.265  Sum_probs=56.1

Q ss_pred             CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034655           16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS   85 (88)
Q Consensus        16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a   85 (88)
                      ++.||.|.+||+++ .||   ++|++|+      +.|.+|.++++|||+++|.+|++|+++++.|||++|
T Consensus         3 i~~gd~V~v~Y~g~-~dG---~~fdss~------~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~a   62 (158)
T 3cgm_A            3 VGQDKVVTIRYTLQ-VEG---EVLDQGE------LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKA   62 (158)
T ss_dssp             CCTTEEEEEEEEEE-ETT---EEEEEEE------EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGT
T ss_pred             CCCCCEEEEEEEEE-ECC---EEEEeeE------EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHH
Confidence            67899999999999 777   9999876      899999999999999999999999999999999875

>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A

Probab=99.59  E-value=1.6e-14  Score=96.45  Aligned_cols=74  Identities=32%  Similarity=0.504  Sum_probs=68.2

Q ss_pred             CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCC---ccccHHHHhcCCCCCcEEE
Q 034655            2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS---VIKGWDEGVMGMQVGEVAR   77 (88)
Q Consensus         2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~---~~~g~~~al~~m~~G~~~~   77 (88)
                      ||.++++++|+|.. |..||.|.+||++++ +|   .+||++      |+.|.+|.+.   ++++|++||..|++|+++.
T Consensus        26 ~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g---~~fd~~------~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~   95 (336)
T 1p5q_A           26 GIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KD---KLFDQR------ELRFEIGEGENLDLPYGLERAIQRMEKGEHSI   95 (336)
T ss_dssp             SEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TT---EEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEE
T ss_pred             cEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CC---EEEecC------CeEEEeCCCCccccchHHHHHHhcCCCCCeEE
Confidence            78999999999984 999999999999998 77   999985      8999999876   5899999999999999999


Q ss_pred             EEECCCCC
Q 034655           78 LRTKPSSS   85 (88)
Q Consensus        78 ~~ip~~~a   85 (88)
                      +.|||++|
T Consensus        96 l~i~p~~a  103 (336)
T 1p5q_A           96 VYLKPSYA  103 (336)
T ss_dssp             EEECTTTT
T ss_pred             EEECCccc
Confidence            99999874

>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5

Probab=99.41  E-value=5.8e-13  Score=92.56  Aligned_cols=67  Identities=25%  Similarity=0.479  Sum_probs=60.0

Q ss_pred             CCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034655           12 NGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS   85 (88)
Q Consensus        12 ~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a   85 (88)
                      .+.+++.||.|.+||+++. ||   +.|+++..   .|+.|.+|.++++|||+++|.||++|+++.|.+|+..+
T Consensus       154 ~~~~~~~gD~V~i~y~g~~-dG---~~fd~~~~---~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~  220 (432)
T 1w26_A          154 KDGAVEAEDRVTIDFTGSV-DG---EEFEGGKA---SDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEE  220 (432)
T ss_dssp             CSSCCCTTCEEEECEEEES-SS---CBCSSCCC---SSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTT
T ss_pred             cCCCCCCCCEEEEEEEEee-CC---eEccCCCc---cceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchh
Confidence            3556999999999999994 66   99999884   59999999999999999999999999999999987643

>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A

Probab=99.31  E-value=1.6e-12  Score=89.44  Aligned_cols=62  Identities=23%  Similarity=0.498  Sum_probs=56.0

Q ss_pred             CCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEEC
Q 034655           13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTK   81 (88)
Q Consensus        13 g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip   81 (88)
                      +.+++.||.|.+||+++. ||   +.|+++..   .|+.|.+|.++++|||+++|.||++|+++.|.+|
T Consensus       158 ~~~~~~gD~V~i~y~g~~-dG---~~fd~~~~---~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~  219 (392)
T 1t11_A          158 DEAAENGKRVSIDFVGSI-DG---VEFEGGKA---ENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVT  219 (392)
T ss_dssp             SCCCCTTCEEEEEEEEES-SS---SCCTTCEE---EEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEE
T ss_pred             CCCCCCCCEEEEEEEEEE-CC---EEccCCCc---cceEEEecCCCcchhHHHHhCCCCCCCEEEEEEe
Confidence            346899999999999994 76   99998854   6999999999999999999999999999999985

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=99.23  E-value=6.7e-11  Score=81.78  Aligned_cols=74  Identities=28%  Similarity=0.447  Sum_probs=65.3

Q ss_pred             CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCC---CccccHHHHhcCCCCCcEEE
Q 034655            2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG---SVIKGWDEGVMGMQVGEVAR   77 (88)
Q Consensus         2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~---~~~~g~~~al~~m~~G~~~~   77 (88)
                      ++.++++++|.|.. |..||.|.+||++++ +|   .+|++      +++.|.+|.+   .++++|+.||..|+.|+++.
T Consensus       147 ~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g---~~f~~------~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~  216 (457)
T 1kt0_A          147 GIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GG---RMFDC------RDVAFTVGEGEDHDIPIGIDKALEKMQREEQCI  216 (457)
T ss_dssp             SEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TT---EEEEE------EEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEE
T ss_pred             ceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CC---eEEec------CceEEEeCCCccccCChHHHHHHHhCCCCCEEE
Confidence            56788889998865 999999999999998 77   99996      3789999966   48999999999999999999


Q ss_pred             EEECCCCC
Q 034655           78 LRTKPSSS   85 (88)
Q Consensus        78 ~~ip~~~a   85 (88)
                      |.++|.+|
T Consensus       217 l~i~P~~a  224 (457)
T 1kt0_A          217 LYLGPRYG  224 (457)
T ss_dssp             EEECGGGT
T ss_pred             EEECcccc
Confidence            99999764

>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A

Probab=98.36  E-value=6.6e-07  Score=62.25  Aligned_cols=57  Identities=16%  Similarity=0.316  Sum_probs=48.6

Q ss_pred             CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEEC
Q 034655           15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTK   81 (88)
Q Consensus        15 ~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip   81 (88)
                      +++.||.|.++|+++. ||   ..|+++..   .++.+.+|.+.  + |+++|.||++|+...|.+.
T Consensus       154 ~a~~gD~V~id~~~~~-dG---~~~~~~~~---~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vt  210 (433)
T 3gty_X          154 PAEAGDLVRVNMEVYN-EE---GKKLTSRE---YEYVISEDEDR--P-FVKDLVGKKKGDVVEIERE  210 (433)
T ss_dssp             CCCTTSEEEEEEEEEC-TT---SCEEEEEE---EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEE
T ss_pred             ccCCCCEEEEEEEEEE-CC---EECcCCCC---CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEe
Confidence            5889999999999984 66   89998654   58888898877  4 9999999999999998763

>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}

Probab=83.70  E-value=3.4  Score=31.67  Aligned_cols=65  Identities=20%  Similarity=0.183  Sum_probs=46.3

Q ss_pred             CCCCCEEEEEEEEEEeCCCceeeE--------------eccCC----------CCCccEEEEeCCCCccccHHHHhcCCC
Q 034655           16 PVAGQKVTVHCTGYGKNGDLSQKF--------------WSTKD----------PGQQPFTFQIGKGSVIKGWDEGVMGMQ   71 (88)
Q Consensus        16 ~~~gd~V~i~y~~~~~~gg~~~~~--------------~~t~~----------~~~~p~~~~lG~~~~~~g~~~al~~m~   71 (88)
                      +..|+.+.|.|+..+...+.-..-              ++.|.          ..+..+.|.+|.+.+.+-++..+..|.
T Consensus       561 i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~qms  640 (950)
T 3htx_A          561 ITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQMT  640 (950)
T ss_dssp             CCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTTCC
T ss_pred             cCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeeecc
Confidence            689999999999998543210000              00000          012478899999999999999999999


Q ss_pred             CCcEEEEEE
Q 034655           72 VGEVARLRT   80 (88)
Q Consensus        72 ~G~~~~~~i   80 (88)
                      .|+...+..
T Consensus       641 ~gqT~~F~~  649 (950)
T 3htx_A          641 VGEYASFKM  649 (950)
T ss_dssp             TTCEEEEEE
T ss_pred             ccceeEEec
Confidence            999988874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	88
d1yata_	113	d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeas	1e-10
d1r9ha_	118	d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabd	1e-10
d1q6ha_	210	d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase	5e-10
d2ppna1	107	d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12)	6e-10
d1kt1a3	115	d.26.1.1 (A:139-253) FKBP51, N-terminal domains {M	1e-09
d1pbka_	116	d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId:	2e-09
d1fd9a_	204	d.26.1.1 (A:) Macrophage infectivity potentiator p	2e-09
d1q1ca2	117	d.26.1.1 (A:141-257) FKBP52, N-terminal domains {H	4e-09
d1ix5a_	151	d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcu	1e-08
d1q1ca1	120	d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Hu	3e-08
d1u79a_	125	d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis tha	1e-06
d1hxva_	85	d.26.1.1 (A:) Trigger factor PPIase domain {Mycopl	4e-06

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 113

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.3 bits (122), Expect = 1e-10
 Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 5/78 (6%)

Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
           ++   ++PG+G   P  G  VT+H TG  +NG   QKF S+ D G   F   IG G VI
Sbjct: 7  NVKIDRISPGDGATFPKTGDLVTIHYTGTLENG---QKFDSSVDRGSP-FQCNIGVGQVI 62

Query: 61 KGWDEGVMGMQVGEVARL 78
          KGWD G+  + VGE ARL
Sbjct: 63 KGWDVGIPKLSVGEKARL 80

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]} Length = 118

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 51.6 bits (123), Expect = 1e-10
 Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 2  GIEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G+ K I   G G  KP  G  V VH  G  +NG      + +       F+F +G+G+VI
Sbjct: 11 GVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENG----TKFDSSRDRGDQFSFNLGRGNVI 66

Query: 61 KGWDEGVMGMQVGEVARLRTKP 82
          KGWD GV  M  GEVA    + 
Sbjct: 67 KGWDLGVATMTKGEVAEFTIRS 88

>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]} Length = 210

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Peptidyl-prolyl cis-trans isomerase FkpA
species: Escherichia coli [TaxId: 562]

 Score = 51.0 bits (121), Expect = 5e-10
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 6/82 (7%)

Query: 1   MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
            G+  Q++  G G  P     V V+  G   +G   ++F ++   G +P +F++    VI
Sbjct: 107 TGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDG---KEFDNSYTRG-EPLSFRLDG--VI 160

Query: 61  KGWDEGVMGMQVGEVARLRTKP 82
            GW EG+  ++ G   +L   P
Sbjct: 161 PGWTEGLKNIKKGGKIKLVIPP 182

>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FK-506 binding protein (FKBP12), an immunophilin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 6e-10
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 5/82 (6%)

Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G++ + ++PG+G   P  GQ   VH TG  ++G    K + +     +PF F +GK  VI
Sbjct: 1  GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG----KKFDSSRDRNKPFKFMLGKQEVI 56

Query: 61 KGWDEGVMGMQVGEVARLRTKP 82
          +GW+EGV  M VG+ A+L   P
Sbjct: 57 RGWEEGVAQMSVGQRAKLTISP 78

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 115

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

 Score = 48.5 bits (115), Expect = 1e-09
 Identities = 17/82 (20%), Positives = 25/82 (30%), Gaps = 8/82 (9%)

Query: 2  GIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          GI ++    G G   P  G +V +H  G          F             +     + 
Sbjct: 9  GIIRRTKRRGEGYSNPNEGARVQIHLEGRCGGRV----FDCRDVAFT---VGEGEDHDIP 61

Query: 61 KGWDEGVMGMQVGEVARLRTKP 82
           G D+ +  MQ  E   L   P
Sbjct: 62 IGIDKALEKMQREEQCILHLGP 83

>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]} Length = 116

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP25
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 2e-09
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGY---GKNGDLSQKFWSTKDPGQQPFTFQIGKG 57
             K +L  G+    P  G  V    TG    G   D + +  + K    +P +F++G G
Sbjct: 2  KYTKSVLKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVG 61

Query: 58 SVIKGWDEGVMGMQVGEVARLRTKP 82
           VI+GWDE ++ M  GE ARL  +P
Sbjct: 62 KVIRGWDEALLTMSKGEKARLEIEP 86

>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]} Length = 204

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Legionella pneumophila [TaxId: 446]

 Score = 49.8 bits (118), Expect = 2e-09
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 1   MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
            G++ +++  GNG KP     VTV  TG   +G      + + +   +P TF      VI
Sbjct: 98  SGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDG----TVFDSTEKTGKPATF--QVSQVI 151

Query: 61  KGWDEGVMGMQVGEVARLRTKP 82
            GW E +  M  G    +    
Sbjct: 152 PGWTEALQLMPAGSTWEIYVPS 173

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 4e-09
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 2  GIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          GI ++I T G G  KP  G  V V   GY K+    Q+         +    +     + 
Sbjct: 9  GIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQREL-------RFEIGEGENLDLP 61

Query: 61 KGWDEGVMGMQVGEVARLRTKP 82
           G +  +  M+ GE + +  KP
Sbjct: 62 YGLERAIQRMEKGEHSIVYLKP 83

>d1ix5a_ d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]} Length = 151

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Archaeal FKBP
species: Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]

 Score = 47.1 bits (111), Expect = 1e-08
 Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 15/76 (19%)

Query: 19 GQKVTVHCTGYGKNGDLSQKFWSTKD------------PGQQPFTFQIGKGSVIKGWDEG 66
          G K+ V   G  ++G     F ++ +               +P  F +G+G +I+G++E 
Sbjct: 5  GVKIKVDYIGKLESG---DVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEA 61

Query: 67 VMGMQVGEVARLRTKP 82
          V+ M+VG+   ++   
Sbjct: 62 VLDMEVGDEKTVKIPA 77

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 3e-08
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 2  GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVI 60
          G+ K I   G G + P+ G +V VH TG+  +G      + +    +  F+F +GKG VI
Sbjct: 12 GVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDG----TKFDSSLDRKDKFSFDLGKGEVI 67

Query: 61 KGWDEGVMGMQVGEVARLRTKP 82
          K WD  +  M+VGEV  +  KP
Sbjct: 68 KAWDIAIATMKVGEVCHITCKP 89

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 125

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.0 bits (95), Expect = 1e-06
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 10/87 (11%)

Query: 2  GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIK 61
          G+       G GP+ V GQ +  H  G  +NG      + +     +P TF+IG G VIK
Sbjct: 9  GLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGK----VFDSSYNRGKPLTFRIGVGEVIK 64

Query: 62 GWDEGVMG------MQVGEVARLRTKP 82
          GWD+G++G      M  G    LR  P
Sbjct: 65 GWDQGILGSDGIPPMLTGGKRTLRIPP 91

>d1hxva_ d.26.1.1 (A:) Trigger factor PPIase domain {Mycoplasma genitalium [TaxId: 2097]} Length = 85

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Mycoplasma genitalium [TaxId: 2097]

 Score = 38.8 bits (90), Expect = 4e-06
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 7/68 (10%)

Query: 15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGE 74
          K   G    +  TG   N    +K  S        +   IG  S IKG++ G++ M+V +
Sbjct: 1  KLANGDIAIIDFTGIVDN----KKLASASAQN---YELTIGSNSFIKGFETGLIAMKVNQ 53

Query: 75 VARLRTKP 82
             L    
Sbjct: 54 KKTLALTF 61

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	88
d1q1ca1	120	FKBP52, N-terminal domains {Human (Homo sapiens) [	99.92
d2ppna1	107	FK-506 binding protein (FKBP12), an immunophilin {	99.92
d1r9ha_	118	FKB-6, N-terminal domain {Caenorhabditis elegans [	99.91
d1yata_	113	Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyc	99.91
d1kt1a2	111	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	99.9
d1pbka_	116	FKBP25 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1q6ha_	210	Peptidyl-prolyl cis-trans isomerase FkpA {Escheric	99.88
d1fd9a_	204	Macrophage infectivity potentiator protein (MIP) {	99.88
d1u79a_	125	FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId:	99.88
d1jvwa_	160	Macrophage infectivity potentiator protein (MIP) {	99.84
d1kt1a3	115	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	99.8
d1q1ca2	117	FKBP52, N-terminal domains {Human (Homo sapiens) [	99.77
d1ix5a_	151	Archaeal FKBP {Archaeon Methanococcus thermolithot	99.72
d1hxva_	85	Trigger factor PPIase domain {Mycoplasma genitaliu	99.57
d1l1pa_	106	Trigger factor PPIase domain {Escherichia coli [Ta	99.15
d1t11a3	113	Trigger factor PPIase domain {Vibrio cholerae [Tax	99.1

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-24  Score=127.25  Aligned_cols=81  Identities=42%  Similarity=0.731  Sum_probs=76.0

Q ss_pred             CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034655            1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR   79 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~   79 (88)
                      .||+|+++++|+|.. |..||.|.+||++++.||   ++|++|++++ +|+.|.+|.+++++||+++|.+|++|++++++
T Consensus        11 ~gv~~~i~~~G~G~~~P~~gd~V~v~y~~~l~dG---~~fdss~~~~-~p~~f~~g~~~~i~G~~~~l~~M~~Ge~~~~~   86 (120)
T d1q1ca1          11 EGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDG---TKFDSSLDRK-DKFSFDLGKGEVIKAWDIAIATMKVGEVCHIT   86 (120)
T ss_dssp             SSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTS---CEEEESTTSS-SCEEEETTTTSSCHHHHHHHTTCCTTCEEEEE
T ss_pred             CCEEEEEEEcccCCcCCCCCCEEEEEEEEEEcCC---CEEEeccccc-cceeeecCCCceeeeeeeeeccccCCcEEEEE
Confidence            489999999999966 899999999999999888   9999999865 59999999999999999999999999999999


Q ss_pred             ECCCCC
Q 034655           80 TKPSSS   85 (88)
Q Consensus        80 ip~~~a   85 (88)
                      |||++|
T Consensus        87 ip~~la   92 (120)
T d1q1ca1          87 CKPEYA   92 (120)
T ss_dssp             ECGGGT
T ss_pred             ECHHHh
Confidence            999986

>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FK-506 binding protein (FKBP12), an immunophilin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.5e-25  Score=126.78  Aligned_cols=80  Identities=43%  Similarity=0.841  Sum_probs=75.2

Q ss_pred             CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      |++|+++++|+|.. |+.||.|.+||++++.||   ++|++|++.+ +|+.|.+|.+++++||+++|.+|++|++++++|
T Consensus         1 Gv~~~~l~~G~G~~~p~~gd~V~v~y~g~l~dG---~~~d~s~~~~-~p~~~~~g~~~~i~G~~~~l~~M~~Ge~~~~~i   76 (107)
T d2ppna1           1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDRN-KPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTI   76 (107)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEE
T ss_pred             CcEEEEEECcCCccCCCCCCEEEEEEEEEecCC---eEEEeeeccc-eeeeEeeCcchhheeehhhhcCccCCCEEEEEE
Confidence            89999999999987 899999999999999888   9999998755 599999999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus        77 p~~la   81 (107)
T d2ppna1          77 SPDYA   81 (107)
T ss_dssp             CGGGT
T ss_pred             CHHHh
Confidence            99986

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.91  E-value=5.5e-25  Score=128.40  Aligned_cols=80  Identities=44%  Similarity=0.757  Sum_probs=75.3

Q ss_pred             CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      ||+|+++++|+|.. |+.||.|.+||++++.||   ++|++|+.++ +|+.|.+|.+++++||+++|.+|++||+++++|
T Consensus        11 Gl~~~il~~G~G~~~p~~gd~V~v~y~~~l~dG---~v~dss~~~~-~p~~f~~g~~~vi~G~~~~l~~M~~Ge~~~~~i   86 (118)
T d1r9ha_          11 GVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENG---TKFDSSRDRG-DQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTI   86 (118)
T ss_dssp             SEEEEEEECCBSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEE
T ss_pred             CEEEEEEECcCCCCCCCCCCEEEEEEEEEEcCC---CEEEEccccc-eeeeeeccCcceeeeeeeeeeeecCCceEEEEE
Confidence            89999999999975 999999999999999888   9999998755 599999999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus        87 pp~la   91 (118)
T d1r9ha_          87 RSDYG   91 (118)
T ss_dssp             CGGGT
T ss_pred             CHHHh
Confidence            99986

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=4.3e-24  Score=123.64  Aligned_cols=80  Identities=45%  Similarity=0.763  Sum_probs=75.4

Q ss_pred             CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      ||+++++++|+|.. |+.||.|.+||++++.||   ++|++++... .|+.|.++.+++++||++||.+|++|++++++|
T Consensus         7 gl~~~~l~~G~G~~~P~~gd~V~v~y~~~~~dG---~~~ds~~~~~-~~~~~~~~~~~~i~G~~~~l~~M~~G~~~~~~i   82 (113)
T d1yata_           7 NVKIDRISPGDGATFPKTGDLVTIHYTGTLENG---QKFDSSVDRG-SPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTI   82 (113)
T ss_dssp             GCEEEEEECCCSSCCCCTTCEEEEEEEEEETTS---CEEEESTTTT-CCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEE
T ss_pred             CcEEEEEECccCCcCCCCCCEEEEEEEEEEecC---cEEeccccCC-ceEeeeeccCceeeehhhhcccccCCCEEEEEe
Confidence            78999999999987 899999999999999888   9999999855 599999999999999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus        83 P~~la   87 (113)
T d1yata_          83 PGPYA   87 (113)
T ss_dssp             CGGGT
T ss_pred             chHHe
Confidence            99986

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=99.90  E-value=9.3e-25  Score=126.20  Aligned_cols=81  Identities=44%  Similarity=0.760  Sum_probs=58.2

Q ss_pred             CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034655            1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR   79 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~   79 (88)
                      .|++|+++++|+|.. |..||.|.+||++++.||   ++|++|++.+ +|+.|.+|.+++++||+++|.+|++||+++++
T Consensus         4 ~Gi~~~i~~~G~g~~~P~~gd~V~v~y~~~l~dG---~~~dss~~~~-~p~~f~lg~~~~i~G~~~~l~~M~~Ge~~~~~   79 (111)
T d1kt1a2           4 RGVLKIVKRVGHGEETPMIGDRVYVHYNGKLANG---KKFDSSHDRN-EPFVFSIGKGQVIKAWDIGVATMKKGEICHLL   79 (111)
T ss_dssp             CSCEEEC----CCSCCCCTTCEEEEECCCCSCC----------------CEEEETTSSSSCHHHHHSTTTCCTTCCEEEE
T ss_pred             CCeEEEEEEcccCCcCCCCCCEEEEEEEEEECCC---CEEEEEEecc-eeeeeecCCCcEEeeeeeeehhccCCcEEEEE
Confidence            489999999999976 899999999999998888   9999999865 59999999999999999999999999999999


Q ss_pred             ECCCCC
Q 034655           80 TKPSSS   85 (88)
Q Consensus        80 ip~~~a   85 (88)
                      |||++|
T Consensus        80 ip~~la   85 (111)
T d1kt1a2          80 CKPEYA   85 (111)
T ss_dssp             C----C
T ss_pred             ECHHHh
Confidence            999987

>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP25
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.5e-23  Score=120.83  Aligned_cols=81  Identities=33%  Similarity=0.626  Sum_probs=73.6

Q ss_pred             CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCC------CCccEEEEeCCCCccccHHHHhcCCCCCc
Q 034655            2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDP------GQQPFTFQIGKGSVIKGWDEGVMGMQVGE   74 (88)
Q Consensus         2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~------~~~p~~~~lG~~~~~~g~~~al~~m~~G~   74 (88)
                      .+.++|+++|+|.. |+.||.|.+||++++.||   ++||+|++.      ..+|+.|.+|.+++++||+++|.+|++||
T Consensus         2 ~~~k~vl~~G~G~~~P~~gd~V~v~y~~~l~dG---~~fdss~~~~~~~~~~~~p~~f~lg~~~~i~Gl~~~v~~M~~Ge   78 (116)
T d1pbka_           2 KYTKSVLKKGDKTNFPKKGDVVHCWYTGTLQDG---TVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE   78 (116)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEECTTS---CEEEECCCSSCCTTTSSCCEEEETTTTSSCHHHHHHHTTCCTTC
T ss_pred             cceEEEEecCCCCCCCCCCCEEEEEEEEEECCC---CEeecccccccccccCCCceeeeecccccccchheechhhcCCc
Confidence            36789999999965 999999999999999888   999998652      23699999999999999999999999999


Q ss_pred             EEEEEECCCCC
Q 034655           75 VARLRTKPSSS   85 (88)
Q Consensus        75 ~~~~~ip~~~a   85 (88)
                      +++++|||++|
T Consensus        79 ~~~~~ip~~~a   89 (116)
T d1pbka_          79 KARLEIEPEWA   89 (116)
T ss_dssp             EEEEEECGGGT
T ss_pred             EEEEEECHHHh
Confidence            99999999987

>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Peptidyl-prolyl cis-trans isomerase FkpA
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=3.9e-23  Score=130.58  Aligned_cols=79  Identities=28%  Similarity=0.578  Sum_probs=74.2

Q ss_pred             CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      -|++|+++++|+|..|..||.|.+||++++.||   ++|++|+.++ +|+.|.+  +++++||+++|..|++|++++++|
T Consensus       107 sGl~y~v~~~G~G~~p~~gd~v~v~y~g~l~dG---~~fd~s~~~~-~p~~~~~--~~vi~g~~e~l~~m~~G~k~~~~i  180 (210)
T d1q6ha_         107 TGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDG---KEFDNSYTRG-EPLSFRL--DGVIPGWTEGLKNIKKGGKIKLVI  180 (210)
T ss_dssp             TSCEEEEEECCSSCCCCTTCEEEEEEEEEETTS---CEEEEGGGGT-SCEEEEG--GGSCHHHHHHGGGSCTTCEEEEEE
T ss_pred             CceEEEEeeCCCCCCCCCCceEEEEEEEEEcCC---CEEeecccCC-Ccceecc--CccchhHHHHHhhccCCCEEEEEE
Confidence            389999999999999999999999999999988   9999999866 5999999  479999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus       181 P~~la  185 (210)
T d1q6ha_         181 PPELA  185 (210)
T ss_dssp             CGGGT
T ss_pred             CHHHC
Confidence            99987

>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Legionella pneumophila [TaxId: 446]

Probab=99.88  E-value=4.8e-23  Score=129.66  Aligned_cols=79  Identities=34%  Similarity=0.551  Sum_probs=73.3

Q ss_pred             CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      .|++|+++++|+|..|..+|.|.+||++++.||   ++|++|+.++ .|+.|.+  +++++||+++|.+|++|++++++|
T Consensus        98 sGl~y~v~~~G~G~~p~~~d~v~v~y~g~l~dg---~~f~~s~~~~-~p~~~~~--~~~i~G~~e~l~~m~~G~~~~~~i  171 (204)
T d1fd9a_          98 SGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDG---TVFDSTEKTG-KPATFQV--SQVIPGWTEALQLMPAGSTWEIYV  171 (204)
T ss_dssp             TSCEEEEEECCCSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHC-SCEEEEG--GGSCHHHHHHHTTCCTTCEEEEEE
T ss_pred             CccEEEEeecCCCcccCCCCEEEEEEEEEECCC---CEecccccCC-CCceecC--CccchhHHHHhcCCCCCCEEEEEE
Confidence            389999999999999999999999999999998   9999998755 5888887  579999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus       172 P~~la  176 (204)
T d1fd9a_         172 PSGLA  176 (204)
T ss_dssp             CGGGT
T ss_pred             ChHHC
Confidence            99986

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=5.4e-23  Score=120.70  Aligned_cols=80  Identities=40%  Similarity=0.690  Sum_probs=74.3

Q ss_pred             CeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhc------CCCCCcE
Q 034655            2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVM------GMQVGEV   75 (88)
Q Consensus         2 Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~------~m~~G~~   75 (88)
                      |++|+++++|+|+.|+.||.|.+||++++.||   ++|++|+..+ .|+.|.+|.+.++++|++++.      .|++|++
T Consensus         9 Gl~y~~~~~G~G~~p~~gd~V~v~y~g~l~~G---~~fdss~~~~-~p~~~~~g~~~~i~g~~~~i~g~~~l~~M~~G~k   84 (125)
T d1u79a_           9 GLAFCDKVVGYGPEAVKGQLIKAHYVGKLENG---KVFDSSYNRG-KPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGK   84 (125)
T ss_dssp             SCEEEEEECCSSCBCCTTCEEEEEEEEECTTS---CEEEEHHHHT-SCEEEETTSSSSCHHHHHHHHCBTTBCCCBTTCE
T ss_pred             CCEEEEEEeccCCCCCCCCEEEEEEEeeecCC---cEEecccccC-cceeEecCccccccchhhhccchhhcccccCCCE
Confidence            89999999999999999999999999998887   9999998755 599999999999999998875      4999999


Q ss_pred             EEEEECCCCC
Q 034655           76 ARLRTKPSSS   85 (88)
Q Consensus        76 ~~~~ip~~~a   85 (88)
                      ++++|||++|
T Consensus        85 ~~v~iP~~la   94 (125)
T d1u79a_          85 RTLRIPPELA   94 (125)
T ss_dssp             EEEEECGGGT
T ss_pred             EEEEECHHHC
Confidence            9999999987

>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.84  E-value=1.1e-21  Score=119.51  Aligned_cols=78  Identities=32%  Similarity=0.512  Sum_probs=70.1

Q ss_pred             CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034655            2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT   80 (88)
Q Consensus         2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i   80 (88)
                      ||+|+++++|+|.. |..||.|.|||++++.||   ++|++++... .|  |.++.+.+++||+++|.+|++|++++|+|
T Consensus        35 Gl~y~il~~G~G~~~P~~gd~V~v~Y~g~l~dG---~~fds~~~~~-~p--~~~~~~~~i~G~~e~l~~M~~Ge~~~v~i  108 (160)
T d1jvwa_          35 GLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDG---TVFDSSRERG-KP--TTFRPNEVIKGWTEALQLMREGDRWRLFI  108 (160)
T ss_dssp             SCEEEEEECCCCSBCCCTTCCEEEEEEEECTTS---CEEEEHHHHT-SC--EEECGGGSCHHHHHHHTTCCTTCEEEEEE
T ss_pred             CCEEEEEECcccccCCCCCcceEEEEEEEEccC---Ceeeeecccc-Cc--cccCccccchhHHHHhcCccccceeEEEe
Confidence            89999999999975 899999999999999888   9999988733 35  55666899999999999999999999999


Q ss_pred             CCCCC
Q 034655           81 KPSSS   85 (88)
Q Consensus        81 p~~~a   85 (88)
                      ||++|
T Consensus       109 Pp~la  113 (160)
T d1jvwa_         109 PYDLA  113 (160)
T ss_dssp             CGGGT
T ss_pred             CHHHC
Confidence            99987

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=99.80  E-value=3.9e-19  Score=102.53  Aligned_cols=74  Identities=27%  Similarity=0.427  Sum_probs=64.5

Q ss_pred             CeEEEEeccCCCC-CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCC---CCccccHHHHhcCCCCCcEEE
Q 034655            2 GIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGK---GSVIKGWDEGVMGMQVGEVAR   77 (88)
Q Consensus         2 Gv~~~vl~~G~g~-~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~---~~~~~g~~~al~~m~~G~~~~   77 (88)
                      ||.|+++++|+|. .|+.||.|.+||++++ ++   ..|+++      +..|.++.   ..+++||+++|.+|++||+++
T Consensus         9 gi~k~il~~G~G~~~p~~gd~V~v~y~g~~-~g---~~~~~~------~~~~~~~~~~~~~vi~G~~~~l~~M~~Ge~~~   78 (115)
T d1kt1a3           9 GIIRRTKRRGEGYSNPNEGARVQIHLEGRC-GG---RVFDCR------DVAFTVGEGEDHDIPIGIDKALEKMQREEQCI   78 (115)
T ss_dssp             SEEEEEEECCCCSSCCCTTCEEEEEEEEEE-TT---EEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEE
T ss_pred             CEEEEEEEeecCCCCCCCCCEEEEEEEEEe-CC---cccccc------ccCceeeeccccccCchhHhhhccchhhceeE
Confidence            7999999999995 5999999999999996 66   778753      56666664   358999999999999999999


Q ss_pred             EEECCCCC
Q 034655           78 LRTKPSSS   85 (88)
Q Consensus        78 ~~ip~~~a   85 (88)
                      ++|||++|
T Consensus        79 v~ip~~~a   86 (115)
T d1kt1a3          79 LHLGPRYG   86 (115)
T ss_dssp             EEECGGGS
T ss_pred             EEeCHHHC
Confidence            99999986

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.8e-18  Score=100.03  Aligned_cols=74  Identities=32%  Similarity=0.464  Sum_probs=62.1

Q ss_pred             CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCC---CCccccHHHHhcCCCCCcEEE
Q 034655            2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGK---GSVIKGWDEGVMGMQVGEVAR   77 (88)
Q Consensus         2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~---~~~~~g~~~al~~m~~G~~~~   77 (88)
                      ||.|+++++|+|.. |..||.|.+||++++.++    .|+++      +..+..+.   ..+++||+++|.+|++|++++
T Consensus         9 gi~~~il~~G~G~~~p~~gd~V~v~y~g~~~~~----~~~~~------~~~~~~~~~~~~~~i~Gl~~~l~~M~~Ge~~~   78 (117)
T d1q1ca2           9 GIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDK----LFDQR------ELRFEIGEGENLDLPYGLERAIQRMEKGEHSI   78 (117)
T ss_dssp             SEEEEEEECCSCSCCCCTTCEEEEEEEEEETTE----EEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEE
T ss_pred             CEEEEEEeeecCCCCCCCCCEEEEEEEEEeCCC----cEeec------cccceeeecceeeeCcHHHHhhhcchhhCeEE
Confidence            89999999999965 999999999999998543    45542      45555553   368999999999999999999


Q ss_pred             EEECCCCC
Q 034655           78 LRTKPSSS   85 (88)
Q Consensus        78 ~~ip~~~a   85 (88)
                      ++|||++|
T Consensus        79 i~ip~~~a   86 (117)
T d1q1ca2          79 VYLKPSYA   86 (117)
T ss_dssp             EEECGGGT
T ss_pred             EEECHHHh
Confidence            99999986

>d1ix5a_ d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Archaeal FKBP
species: Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]

Probab=99.72  E-value=2.2e-18  Score=103.81  Aligned_cols=67  Identities=25%  Similarity=0.525  Sum_probs=60.9

Q ss_pred             CCCCCEEEEEEEEEEeCCCceeeEeccCC------------CCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCC
Q 034655           16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKD------------PGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPS   83 (88)
Q Consensus        16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~------------~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~   83 (88)
                      ++.||.|.+||++++.||   ++|++|++            ...+|+.|.+|.++++|||++||.+|++|+++++.|||+
T Consensus         2 v~~G~~V~v~Y~~~~~~G---~~fdsT~e~~~~~~~~~~~~~~~~P~~f~~G~g~~ipglE~al~gm~~Ge~~~v~i~p~   78 (151)
T d1ix5a_           2 VDKGVKIKVDYIGKLESG---DVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAE   78 (151)
T ss_dssp             CCTTCEEEECCEECCTTS---CCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTT
T ss_pred             ccCCCEEEEEEEEEECCC---CEEEeCchHhcccccccccccCCCCEEEEecCCCccHHHHHHHHhhcCCceeEEEeCHH
Confidence            678999999999999777   99999963            234699999999999999999999999999999999999


Q ss_pred             CC
Q 034655           84 SS   85 (88)
Q Consensus        84 ~a   85 (88)
                      +|
T Consensus        79 ~a   80 (151)
T d1ix5a_          79 KA   80 (151)
T ss_dssp             TS
T ss_pred             Hh
Confidence            76

>d1hxva_ d.26.1.1 (A:) Trigger factor PPIase domain {Mycoplasma genitalium [TaxId: 2097]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Mycoplasma genitalium [TaxId: 2097]

Probab=99.57  E-value=4.8e-15  Score=81.25  Aligned_cols=62  Identities=27%  Similarity=0.442  Sum_probs=55.9

Q ss_pred             CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCC
Q 034655           16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSS   84 (88)
Q Consensus        16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~   84 (88)
                      ++.||.|.++|+++. ||   +.|+++..   +.+.|.+|.+.++|||+++|.+|++|+++.|.|++..
T Consensus         2 ~a~GD~V~idy~g~~-dG---~~~~~~~~---~~~~~~lg~~~~ipgf~~~l~g~~~Ge~~~~~i~~p~   63 (85)
T d1hxva_           2 LANGDIAIIDFTGIV-DN---KKLASASA---QNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPS   63 (85)
T ss_dssp             CCSSEEEEEEEEEEE-TT---EECSTTCC---SEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCT
T ss_pred             CCCCCEEEEEEEEEE-CC---EEcccccc---cCCCEEECCcccCchHHHHhccCcCCCeEEEEEEChh
Confidence            678999999999996 88   99998775   5899999999999999999999999999999997543

>d1l1pa_ d.26.1.1 (A:) Trigger factor PPIase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Escherichia coli [TaxId: 562]

Probab=99.15  E-value=2e-11  Score=69.00  Aligned_cols=62  Identities=27%  Similarity=0.529  Sum_probs=53.3

Q ss_pred             CCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEEC
Q 034655           13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTK   81 (88)
Q Consensus        13 g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip   81 (88)
                      ..+++.||.|.++|+++. ||   +.+++...   +.+.|.+|.+.++++|+++|.+|++|++..|.+.
T Consensus        12 dr~a~~GD~v~id~~~~~-dG---~~~~~~~~---~~~~~~lg~~~~~~gf~~~L~G~k~Ge~~~~~~~   73 (106)
T d1l1pa_          12 DGAVEAEDRVTIDFTGSV-DG---EEFEGGKA---SDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVT   73 (106)
T ss_dssp             SSSCCTTEEEEEEEECCS-SS---SCCSTTEE---EEEEEEETTSCCCTTHHHHTTSCCTTCCEEEEEC
T ss_pred             cccccCCCEEEEEEEEEE-CC---EECCCCcc---cceEEEecCCCccchHHHHhcCCCCCceEEEEEE
Confidence            355889999999999975 77   77775443   5799999999999999999999999999998884

>d1t11a3 d.26.1.1 (A:135-247) Trigger factor PPIase domain {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Vibrio cholerae [TaxId: 666]

Probab=99.10  E-value=2.4e-11  Score=69.32  Aligned_cols=61  Identities=23%  Similarity=0.505  Sum_probs=52.4

Q ss_pred             CCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEEC
Q 034655           14 PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTK   81 (88)
Q Consensus        14 ~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip   81 (88)
                      .+++.||.|.++|+++. ||   +.++....   ..+.|.+|.+.++++|+++|.||++|+++.|.++
T Consensus        22 r~a~~gD~v~id~~~~~-dG---~~~~~~~~---~~~~~~lg~~~~~~~f~~~L~G~k~Ge~~~~~~~   82 (113)
T d1t11a3          22 EAAENGKRVSIDFVGSI-DG---VEFEGGKA---ENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVT   82 (113)
T ss_dssp             CCCCTTCEEEEEEEEES-SS---SCCTTCEE---EEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEE
T ss_pred             ccccCCCEEEEEEEEEE-CC---EEccCCcc---ceEEEEeccccccccHHHhhcCCcCCCEEEEEEe
Confidence            35899999999999986 66   77776543   5899999999999999999999999999876664