Citrus Sinensis ID: 034737

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-----
Protein Sequence
MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKFALAFLRL
Secondary Structure (PSIPRED)
cccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHcccccccccccEEEEEEcccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEccccHHHHHHHHHHHHHccEEEEEEccccHHHHHHHHHHHHccccccccccccEEEEEEccccHHHHHHHHcc
Coil and Loop (DISEMBL)
melkpglsafvtggaSGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENakfhsnlgfpsamfirCDVTNTKFALAFLRL
Flexible Loop (DISEMBL)
MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKFALAFLRL
Low Complexity Region (SEG)
MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKFALAFLRL
Disordered region (IsUnstruct)
********AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKFALAFL**
Disordered Region (DISOPRED)
****PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKFALAFLRL
Disordered Region (DISEMBL)
MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKFALAFLRL
Disordered Region (DISPRO)
****PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKFALAFLRL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKFALAFLRL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	85	2.2.26 [Sep-21-2011]
O80714	258	Short-chain dehydrogenase	no	no	0.647	0.213	0.409	3e-05
O80713	257	Short-chain dehydrogenase	no	no	0.717	0.237	0.416	4e-05
O18404	255	3-hydroxyacyl-CoA dehydro	yes	no	0.752	0.250	0.434	0.0003
F4J300	259	Short-chain dehydrogenase	no	no	0.647	0.212	0.378	0.0004
P40397	285	Uncharacterized oxidoredu	yes	no	0.6	0.178	0.461	0.0004
Q8MJY8	266	15-hydroxyprostaglandin d	N/A	no	0.764	0.244	0.388	0.0005
Q9ZNN8	258	L-2,3-butanediol dehydrog	yes	no	0.682	0.224	0.405	0.0005
P15428	266	15-hydroxyprostaglandin d	yes	no	0.764	0.244	0.375	0.0009

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 11/66 (16%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFI 69
           +TGGASGIG   +      G  V +VD+ EE G  VA L+ K+ A F+           
Sbjct: 12 IITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFY----------- 60

Query: 70 RCDVTN 75
          RCDVTN
Sbjct: 61 RCDVTN 66

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 34/72 (47%), Gaps = 11/72 (15%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G  A +TGGASGIG          G  V +VD  EE G  VA  V K+ A F+       
Sbjct: 8  GKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFY------- 60

Query: 66 AMFIRCDVTNTK 77
              RCDVTN K
Sbjct: 61 ----RCDVTNEK 68

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O18404|HCD2_DROME 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophila melanogaster GN=scu PE=1 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 12/76 (15%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          + VTGGASG+GRA +  LA +G  V + DL   KGNEVA    KE       LG    +F
Sbjct: 7  SLVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVA----KE-------LG-DKVVF 54

Query: 69 IRCDVTNTKFALAFLR 84
          +  DVT+ K   A L+
Sbjct: 55 VPVDVTSEKDVSAALQ 70

May function in mitochondrial tRNA maturation (By similarity). May play a role in germline formation.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 8

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 11/66 (16%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFI 69
           +TGGASGIG   +      G  V +VDL EE G  VA            ++G   A F 
Sbjct: 12 IITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAV-----------SIGLDKASFY 60

Query: 70 RCDVTN 75
          RCD+T+
Sbjct: 61 RCDITD 66

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P40397|YHXC_BACSU Uncharacterized oxidoreductase YhxC OS=Bacillus subtilis (strain 168) GN=yhxC PE=3 SV=2

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAK 56
          G +A +TGG SGIGRA+S+  A +G  V +V L+E +   E    VEKE  K
Sbjct: 41 GKTAIITGGDSGIGRAVSVLFAKEGANVVIVYLNEHQDAEETKQYVEKEGVK 92

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8MJY8|PGDH_MACFA 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Macaca fascicularis GN=HPGD PE=2 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 7/72 (9%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G  A VTG A GIGRA + AL  KG  V +VD + E G +  A +++   KF        
Sbjct: 5  GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDE---KFEPQ----K 57

Query: 66 AMFIRCDVTNTK 77
           +FI+CDV + +
Sbjct: 58 TLFIQCDVADQQ 69

Prostaglandin inactivation. Contributes to the regulation of events that are under the control of prostaglandin levels. Catalyzes the NAD-dependent dehydrogenation of lipoxin A4 to form 15-oxo-lipoxin A4.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q9ZNN8|BUDC_CORGT L-2,3-butanediol dehydrogenase OS=Corynebacterium glutamicum GN=budC PE=1 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 11/69 (15%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL--SEEKGNEVAALVEKENAKFHSNLGFPSA 66
          A VTGGA GIGR +S  LA  G  + V DL   EE+  E   L+E  + K         A
Sbjct: 5  AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK---------A 55

Query: 67 MFIRCDVTN 75
          +F+  DVT+
Sbjct: 56 VFVGLDVTD 64

Catalyzes the reversible reduction of (S)-acetoin to (S,S)-butane-2,3-diol (L-BD) in the presence of NADH. To a lesser extent, can also catalyze the irreversible reduction of diacetyl to (S)-acetoin. Cannot oxidize meso-BD, D-BD, 2-butanol, 1,2-propanediol, ethanol, acetol, 1,2-butanediol, 1,3-butanediol, n-butanol, and n-propanol. Cannot reduce (R)-acetoin, acetol, dihydroxyacetone and 2,4-pentanedione.

Corynebacterium glutamicum (taxid: 1718)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 4

>sp|P15428|PGDH_HUMAN 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Homo sapiens GN=HPGD PE=1 SV=1

 Score = 42.4 bits (98), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 7/72 (9%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G  A VTG A GIGRA + AL  KG  V +VD + E G +  A ++++   F        
Sbjct: 5  GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDEQ---FEPQ----K 57

Query: 66 AMFIRCDVTNTK 77
           +FI+CDV + +
Sbjct: 58 TLFIQCDVADQQ 69

Prostaglandin inactivation. Contributes to the regulation of events that are under the control of prostaglandin levels. Catalyzes the NAD-dependent dehydrogenation of lipoxin A4 to form 15-oxo-lipoxin A4. Inhibits in vivo proliferation of colon cancer cells.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
225428782	634	PREDICTED: zinc-binding alcohol dehydrog	0.964	0.129	0.807	3e-30
224105531	634	predicted protein [Populus trichocarpa]	0.964	0.129	0.783	2e-29
255555487	634	alcohol dehydrogenase, putative [Ricinus	0.964	0.129	0.734	4e-27
171854667	633	putative NADPH oxidoreductase [Capsicum	0.894	0.120	0.815	7e-27
147855655	387	hypothetical protein VITISV_003027 [Viti	0.964	0.211	0.663	5e-26
886434	629	ARP protein [Arabidopsis thaliana]	0.882	0.119	0.76	2e-25
297852652	634	ARP protein [Arabidopsis lyrata subsp. l	0.882	0.118	0.746	3e-25
357158783	634	PREDICTED: zinc-binding alcohol dehydrog	0.964	0.129	0.710	4e-25
334183183	652	ARP protein [Arabidopsis thaliana] gi|33	0.882	0.115	0.746	5e-25
22330139	629	ARP protein [Arabidopsis thaliana] gi|10	0.882	0.119	0.746	5e-25

>gi|225428782|ref|XP_002285205.1| PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2 [Vitis vinifera] gi|297741296|emb|CBI32427.3| unnamed protein product [Vitis vinifera]

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/83 (80%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          MELKPGLSA VTGGASGIG+A+SLAL  KG+FVTVVD SEE+G EVA+LVEKENAKFH  
Sbjct: 1  MELKPGLSALVTGGASGIGKAISLALGEKGIFVTVVDFSEERGKEVASLVEKENAKFHPK 60

Query: 61 LGFPSAMFIRCDVTNTK-FALAF 82
          LGFPSAMFIRCDVTNT+  A AF
Sbjct: 61 LGFPSAMFIRCDVTNTRELAAAF 83

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105531|ref|XP_002313845.1| predicted protein [Populus trichocarpa] gi|222850253|gb|EEE87800.1| predicted protein [Populus trichocarpa]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/83 (78%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          ME+KPGLSA VTGGASGIGRALSLAL  KG+FVTV+D SEEKG EVA+LVEKENAKFH N
Sbjct: 1  MEIKPGLSAIVTGGASGIGRALSLALGEKGIFVTVIDFSEEKGKEVASLVEKENAKFHPN 60

Query: 61 LGFPSAMFIRCDVTNTK-FALAF 82
          LGFPSA+FIRCDV+ ++  A AF
Sbjct: 61 LGFPSALFIRCDVSKSRDLAAAF 83

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555487|ref|XP_002518780.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223542161|gb|EEF43705.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/83 (73%), Positives = 71/83 (85%), Gaps = 1/83 (1%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          ME++PGLSA +TG ASGIG+ALSLAL  KGVFVTVVD SEEKG EVA+LV+K+NAKFH  
Sbjct: 1  MEIRPGLSALITGAASGIGKALSLALGEKGVFVTVVDFSEEKGKEVASLVQKQNAKFHPK 60

Query: 61 LGFPSAMFIRCDVTNTK-FALAF 82
          L FP+A+FIRCDVTNT+  A AF
Sbjct: 61 LEFPTALFIRCDVTNTRDLAAAF 83

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|171854667|dbj|BAG16523.1| putative NADPH oxidoreductase [Capsicum chinense]

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 62/76 (81%), Positives = 65/76 (85%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          MELKPGLSA VTGGASGIG+ALSLALA KGVFVT+VD SEEKG EVAA+ EKE AKFH  
Sbjct: 1  MELKPGLSALVTGGASGIGKALSLALAQKGVFVTIVDFSEEKGKEVAAVAEKECAKFHFG 60

Query: 61 LGFPSAMFIRCDVTNT 76
          L FP  MFIRCDVTNT
Sbjct: 61 LEFPVVMFIRCDVTNT 76

Source: Capsicum chinense

Species: Capsicum chinense

Genus: Capsicum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147855655|emb|CAN81326.1| hypothetical protein VITISV_003027 [Vitis vinifera]

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/101 (66%), Positives = 72/101 (71%), Gaps = 19/101 (18%)

Query: 1   MELKPGLSAFVTGGASGIGR------------------ALSLALAGKGVFVTVVDLSEEK 42
           MELKPGLSA VTGGASGIG+                  A+SLAL  KG+FVTVVD SEE 
Sbjct: 1   MELKPGLSALVTGGASGIGKSHDREFDLEFLIDRVIGKAISLALGEKGIFVTVVDFSEEG 60

Query: 43  GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTK-FALAF 82
           G EVA+LVEKENAKFH  LGFPSAMFIRCDVTNT+  A AF
Sbjct: 61  GKEVASLVEKENAKFHPKLGFPSAMFIRCDVTNTRELAAAF 101

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|886434|emb|CAA89858.1| ARP protein [Arabidopsis thaliana]

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/75 (76%), Positives = 62/75 (82%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          ME+KPGLSA VTGGASGIGRAL LALA KGVFVTV D SEEKG E  +LV K NAKFH  
Sbjct: 1  MEIKPGLSALVTGGASGIGRALCLALAEKGVFVTVADFSEEKGQETTSLVRKANAKFHHG 60

Query: 61 LGFPSAMFIRCDVTN 75
          L FPSA+F++CDVTN
Sbjct: 61 LNFPSAIFVKCDVTN 75

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297852652|ref|XP_002894207.1| ARP protein [Arabidopsis lyrata subsp. lyrata] gi|297340049|gb|EFH70466.1| ARP protein [Arabidopsis lyrata subsp. lyrata]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/75 (74%), Positives = 63/75 (84%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          ME+KPGLSA VTGGASGIGRAL LALA KGVFVTVVD SEEKG E+ +LV K NAK+H  
Sbjct: 1  MEIKPGLSALVTGGASGIGRALCLALADKGVFVTVVDFSEEKGQEITSLVRKANAKYHPG 60

Query: 61 LGFPSAMFIRCDVTN 75
          L  PSA+F++CDVTN
Sbjct: 61 LSSPSAIFVKCDVTN 75

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357158783|ref|XP_003578239.1| PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2-like [Brachypodium distachyon]

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 59/83 (71%), Positives = 69/83 (83%), Gaps = 1/83 (1%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          MELKPG+SAFVTGGASGIG+AL LA A KG+FVTVVD SEE G EVA+LV++EN KFH +
Sbjct: 1  MELKPGMSAFVTGGASGIGKALCLAFAQKGLFVTVVDFSEESGKEVASLVQQENKKFHGD 60

Query: 61 LGFPSAMFIRCDVTNT-KFALAF 82
          LG  SA+FI+CDV+NT   A AF
Sbjct: 61 LGVSSAIFIKCDVSNTDDLAAAF 83

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334183183|ref|NP_001185182.1| ARP protein [Arabidopsis thaliana] gi|332194337|gb|AEE32458.1| ARP protein [Arabidopsis thaliana]

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/75 (74%), Positives = 62/75 (82%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          ME+KPGLSA VTGGASGIGRAL LALA KGVFVTV D SEEKG E  +LV + NAKFH  
Sbjct: 1  MEIKPGLSALVTGGASGIGRALCLALAEKGVFVTVADFSEEKGQETTSLVREANAKFHQG 60

Query: 61 LGFPSAMFIRCDVTN 75
          L FPSA+F++CDVTN
Sbjct: 61 LSFPSAIFVKCDVTN 75

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22330139|ref|NP_175390.2| ARP protein [Arabidopsis thaliana] gi|10120437|gb|AAG13062.1|AC011807_21 ARP protein [Arabidopsis thaliana] gi|17065304|gb|AAL32806.1| ARP protein [Arabidopsis thaliana] gi|18252161|gb|AAL61913.1| ARP protein [Arabidopsis thaliana] gi|20259988|gb|AAM13341.1| ARP protein [Arabidopsis thaliana] gi|30725460|gb|AAP37752.1| At1g49670 [Arabidopsis thaliana] gi|332194336|gb|AEE32457.1| ARP protein [Arabidopsis thaliana]

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/75 (74%), Positives = 62/75 (82%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          ME+KPGLSA VTGGASGIGRAL LALA KGVFVTV D SEEKG E  +LV + NAKFH  
Sbjct: 1  MEIKPGLSALVTGGASGIGRALCLALAEKGVFVTVADFSEEKGQETTSLVREANAKFHQG 60

Query: 61 LGFPSAMFIRCDVTN 75
          L FPSA+F++CDVTN
Sbjct: 61 LSFPSAIFVKCDVTN 75

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
UNIPROTKB|E1C1D6	265	HPGD "Uncharacterized protein"	0.764	0.245	0.416	2.6e-07
UNIPROTKB|E1C688	266	HPGD "Uncharacterized protein"	0.764	0.244	0.416	2.6e-07
UNIPROTKB|Q5LSX5	153	SPO1639 "FadB domain protein"	0.529	0.294	0.555	1.3e-06
TIGR_CMR|SPO_1639	153	SPO_1639 "fadB domain protein"	0.529	0.294	0.555	1.3e-06
ASPGD|ASPL0000052294	313	AN0023 [Emericella nidulans (t	0.717	0.194	0.418	1.7e-06
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.717	0.237	0.416	4.1e-06
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.694	0.228	0.4	4.1e-06
TIGR_CMR|BA_0748	288	BA_0748 "oxidoreductase, short	0.635	0.187	0.464	8.7e-06
TIGR_CMR|BA_1958	242	BA_1958 "oxidoreductase, short	0.647	0.227	0.472	1.3e-05
UNIPROTKB|Q0C0T5	272	HNE_1957 "Putative 2,5-dichlor	0.6	0.187	0.470	1.3e-05

UNIPROTKB|E1C1D6 HPGD "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 122 (48.0 bits), Expect = 2.6e-07, P = 2.6e-07
 Identities = 30/72 (41%), Positives = 43/72 (59%)

Query:     6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
             G  A VTGGA GIGRA   AL GKG  V ++D + E G +  A ++++   F +      
Sbjct:     5 GKVALVTGGAQGIGRAFVQALLGKGAKVALLDRNPEAGQQSKAALDEQ---FEAQ----R 57

Query:    66 AMFIRCDVTNTK 77
              +FI+CDVT+T+
Sbjct:    58 TVFIQCDVTDTE 69

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0004957 "prostaglandin E receptor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006693 "prostaglandin metabolic process" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0007565 "female pregnancy" evidence=IEA

GO:0007567 "parturition" evidence=IEA

GO:0045786 "negative regulation of cell cycle" evidence=IEA

GO:0070403 "NAD+ binding" evidence=IEA

GO:0097070 "ductus arteriosus closure" evidence=IEA

UNIPROTKB|E1C688 HPGD "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 122 (48.0 bits), Expect = 2.6e-07, P = 2.6e-07
 Identities = 30/72 (41%), Positives = 43/72 (59%)

Query:     6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
             G  A VTGGA GIGRA   AL GKG  V ++D + E G +  A ++++   F +      
Sbjct:     5 GKVALVTGGAQGIGRAFVQALLGKGAKVALLDRNPEAGQQSKAALDEQ---FEAQ----R 57

Query:    66 AMFIRCDVTNTK 77
              +FI+CDVT+T+
Sbjct:    58 TVFIQCDVTDTE 69

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0004957 "prostaglandin E receptor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006693 "prostaglandin metabolic process" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0007565 "female pregnancy" evidence=IEA

GO:0007567 "parturition" evidence=IEA

GO:0045786 "negative regulation of cell cycle" evidence=IEA

GO:0070403 "NAD+ binding" evidence=IEA

GO:0097070 "ductus arteriosus closure" evidence=IEA

UNIPROTKB|Q5LSX5 SPO1639 "FadB domain protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 25/45 (55%), Positives = 32/45 (71%)

Query:     3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA 47
             L  GLSA VTGGASG+G A++ AL   G  V  +DL+EEK ++VA
Sbjct:     2 LVDGLSALVTGGASGLGLAVAEALTNAGAKVAFLDLNEEKVSQVA 46

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SPO_1639 SPO_1639 "fadB domain protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 25/45 (55%), Positives = 32/45 (71%)

Query:     3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA 47
             L  GLSA VTGGASG+G A++ AL   G  V  +DL+EEK ++VA
Sbjct:     2 LVDGLSALVTGGASGLGLAVAEALTNAGAKVAFLDLNEEKVSQVA 46

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000052294 AN0023 [Emericella nidulans (taxid:162425)]

 Score = 116 (45.9 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 31/74 (41%), Positives = 43/74 (58%)

Query:     2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNL 61
             +LK G S  VTGGA+G+G       A  G FVT+ DL+ E+G +VA    KE       L
Sbjct:    23 QLK-GKSVIVTGGANGMGETTVRKFAEAGAFVTIADLNVERGEQVA----KE-------L 70

Query:    62 GFPSAMFIRCDVTN 75
             G P+A F++C++ N
Sbjct:    71 G-PNAQFVQCNIVN 83

GO:0005575 "cellular_component" evidence=ND

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 111 (44.1 bits), Expect = 4.1e-06, P = 4.1e-06
 Identities = 30/72 (41%), Positives = 34/72 (47%)

Query:     6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
             G  A +TGGASGIG          G  V +VD  EE G  VA  V K+ A F+       
Sbjct:     8 GKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFY------- 60

Query:    66 AMFIRCDVTNTK 77
                 RCDVTN K
Sbjct:    61 ----RCDVTNEK 68

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 111 (44.1 bits), Expect = 4.1e-06, P = 4.1e-06
 Identities = 28/70 (40%), Positives = 35/70 (50%)

Query:     6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
             G    +TGGASGIG   +      G  V +VD+ EE G  VA L+ K+ A F+       
Sbjct:     8 GKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFY------- 60

Query:    66 AMFIRCDVTN 75
                 RCDVTN
Sbjct:    61 ----RCDVTN 66

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TIGR_CMR|BA_0748 BA_0748 "oxidoreductase, short chain dehydrogenase/reductase family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 109 (43.4 bits), Expect = 8.7e-06, P = 8.7e-06
 Identities = 26/56 (46%), Positives = 34/56 (60%)

Query:     2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAK 56
             +LK G +  +TGG SGIGRA+S+A A +G  + +  L EE   NE    VEKE  K
Sbjct:    41 KLK-GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK 95

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

TIGR_CMR|BA_1958 BA_1958 "oxidoreductase, short-chain dehydrogenase/reductase family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 106 (42.4 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 26/55 (47%), Positives = 34/55 (61%)

Query:     2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAK 56
             EL  G +A +TG   GIGRA+++ALA +GV V ++  SEE    VA  VE E  K
Sbjct:     6 ELLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARSEENLKAVAKEVEAEGVK 60

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

UNIPROTKB|Q0C0T5 HNE_1957 "Putative 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 107 (42.7 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 24/51 (47%), Positives = 30/51 (58%)

Query:     6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAK 56
             G  + VTGGASGIGR+ +L LA +G  V V D+ E     VAA + K   K
Sbjct:     6 GKVSIVTGGASGIGRSAALVLAREGAAVMVTDIDEAGAQSVAAEINKAGGK 56

GO:0018502 "2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase activity" evidence=ISS

GO:0018919 "gamma-1,2,3,4,5,6-hexachlorocyclohexane metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00036573001 SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (634 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	85
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	7e-12
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-10
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-10
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	4e-10
cd05233	234	cd05233, SDR_c, classical (c) SDRs	6e-10
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	9e-10
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-09
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-09
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-09
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	4e-09
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	5e-09
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	5e-09
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	9e-09
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-08
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-08
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-08
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-08
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-08
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	4e-08
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	4e-08
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	5e-08
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-07
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-07
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	2e-07
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-07
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-07
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-07
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-07
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-07
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	3e-07
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	5e-07
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	6e-07
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	1e-06
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	1e-06
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-06
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-06
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-06
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	2e-06
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	2e-06
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	2e-06
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-06
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	3e-06
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	3e-06
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	4e-06
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	4e-06
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	4e-06
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	4e-06
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	5e-06
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	6e-06
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	7e-06
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	8e-06
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	9e-06
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	9e-06
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-05
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-05
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	1e-05
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-05
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-05
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-05
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	3e-05
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	3e-05
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	3e-05
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	5e-05
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	6e-05
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	6e-05
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	6e-05
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	6e-05
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	7e-05
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	7e-05
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	8e-05
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	9e-05
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	9e-05
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-04
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	1e-04
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-04
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	1e-04
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	1e-04
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-04
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-04
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-04
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-04
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	2e-04
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-04
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-04
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-04
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-04
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-04
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	3e-04
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-04
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	3e-04
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	3e-04
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	4e-04
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	4e-04
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	5e-04
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	5e-04
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	5e-04
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	6e-04
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	6e-04
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	6e-04
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	6e-04
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	7e-04
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	9e-04
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	0.001
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	0.001
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	0.001
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	0.001
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	0.001
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	0.001
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	0.001
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	0.002
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	0.002
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	0.002
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	0.002
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.002
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	0.002
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	0.003
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	0.003
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	0.003
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	0.003
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	0.004
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	0.004
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	0.004
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	0.004
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	0.004
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	0.004
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	0.004

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 58.1 bits (141), Expect = 7e-12
 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TGGASGIG A +  L  KG  V ++D +E  G   A L                A F
Sbjct: 3  AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAA-AELQAIN--------PKVKATF 53

Query: 69 IRCDVTN 75
          ++CDVT+
Sbjct: 54 VQCDVTS 60

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha, 15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 9/79 (11%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G  A VTG A GIGRA+++ LA  G  V VVD+  +     A LVE              
Sbjct: 6  GRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA---------GGK 56

Query: 66 AMFIRCDVTNTKFALAFLR 84
          A   + DV +     A + 
Sbjct: 57 ARARQVDVRDRAALKAAVA 75

Length = 251

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 53.4 bits (129), Expect = 3e-10
 Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 13/69 (18%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          GL A VTGGASG+G A    L  +G  V ++DL    G  VA L +              
Sbjct: 2  GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLGDN------------- 48

Query: 66 AMFIRCDVT 74
            F+  DVT
Sbjct: 49 CRFVPVDVT 57

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 53.6 bits (129), Expect = 4e-10
 Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 9/66 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGGA+GIGRA +LA A +G  V V D     G E  AL+ +   +         A+F
Sbjct: 10 ALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGE---------ALF 60

Query: 69 IRCDVT 74
          + CDVT
Sbjct: 61 VACDVT 66

Length = 253

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 52.7 bits (127), Expect = 6e-10
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 10/67 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG +SGIGRA++  LA +G  V + D +EE   E+AA+               +A+ 
Sbjct: 1  ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALG----------GNAVA 50

Query: 69 IRCDVTN 75
          ++ DV++
Sbjct: 51 VQADVSD 57

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 52.2 bits (126), Expect = 9e-10
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TGG SGIGR L+L  A +G  V ++D++E+   E A  V K   K H         +
Sbjct: 2  VLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVH---------Y 52

Query: 69 IRCDVTN 75
           +CDV+ 
Sbjct: 53 YKCDVSK 59

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 10/67 (14%)

Query: 9   AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
           A VTG A GIG+A +  LA +G  V + DL EE     AA +   +           A+ 
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDR----------ALG 474

Query: 69  IRCDVTN 75
           + CDVT+
Sbjct: 475 VACDVTD 481

Length = 681

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 2e-09
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 10/74 (13%)

Query: 6   GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-GNEVAALVEKENAKFHSNLGFP 64
           G  A +TGG SGIGRA+++  A +G  + +V L E +  NE    VEKE  K        
Sbjct: 46  GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVK-------- 97

Query: 65  SAMFIRCDVTNTKF 78
             + I  DV++  F
Sbjct: 98  -CLLIPGDVSDEAF 110

Length = 290

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 10/69 (14%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G  A VTG +SGIG  ++   A +G  V V D +EE    VAA +               
Sbjct: 5  GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAG----------GR 54

Query: 66 AMFIRCDVT 74
          A+ +  DV+
Sbjct: 55 AIAVAADVS 63

Length = 251

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 4e-09
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 9/67 (13%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFI 69
           +TG ASG+GRA++L  A +G  + + D++EE G E   L+ +               + 
Sbjct: 4  MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGD---------GFYQ 54

Query: 70 RCDVTNT 76
          RCDV + 
Sbjct: 55 RCDVRDY 61

Length = 270

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 50.4 bits (121), Expect = 5e-09
 Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE--KGNEVAALVEKENAKF 57
          G  A +TGG SGIGRA+++A A +G  V +  L EE     E   L+E+E  K 
Sbjct: 26 GKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKC 79

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 50.5 bits (121), Expect = 5e-09
 Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 11/67 (16%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TGGASGIG A +   A  G  V + D+ ++ G  VAA            LG P   F
Sbjct: 7  AIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAA-----------ELGDPDISF 55

Query: 69 IRCDVTN 75
          + CDVT 
Sbjct: 56 VHCDVTV 62

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 49.7 bits (119), Expect = 9e-09
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 9/71 (12%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G  A VTG + GIG  ++  LA  G  + +   +EEK  E   L+EKE  +  +      
Sbjct: 5  GKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATA------ 58

Query: 66 AMFIRCDVTNT 76
               CDV++ 
Sbjct: 59 ---FTCDVSDE 66

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 9/68 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG + GIGRA++L LA +G  V V D SEE   E    ++              A  
Sbjct: 3  ALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGN---------AAA 53

Query: 69 IRCDVTNT 76
          +  DV++ 
Sbjct: 54 LEADVSDR 61

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 49.0 bits (118), Expect = 1e-08
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG + GIGRA++L LA  G  V + D +EE    +AA +     +         A  
Sbjct: 8  ALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGE---------ARV 58

Query: 69 IRCDVTN 75
          +  DV++
Sbjct: 59 LVFDVSD 65

Length = 246

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 49.1 bits (117), Expect = 2e-08
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 7/67 (10%)

Query: 9   AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
           AFVTGGA GIGR  +  LA +G  V + DL+ E    VA       A+ +   G   A+ 
Sbjct: 417 AFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVA-------AEINGQFGAGRAVA 469

Query: 69  IRCDVTN 75
           ++ DVT+
Sbjct: 470 LKMDVTD 476

Length = 676

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTV-VDLSEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG + GIGRA++  LA +G  V +  D++EE   E+   +++E            A+
Sbjct: 8  AIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGD---------AI 58

Query: 68 FIRCDVTN 75
           ++ DV++
Sbjct: 59 AVKADVSS 66

Length = 247

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 3e-08
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG ASGIG  ++LALA +G  V + DL++E     A  ++K   K         A+ 
Sbjct: 7  ALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGK---------AIG 57

Query: 69 IRCDVTN 75
          +  DVT+
Sbjct: 58 VAMDVTD 64

Length = 258

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 4e-08
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A V GG   +G  L   LA +G  V V D++ EK   VA   ++ NA++    G   A  
Sbjct: 5  AVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVA---QEINAEY----GEGMAYG 57

Query: 69 IRCDVTN 75
             D T+
Sbjct: 58 FGADATS 64

Length = 259

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 47.9 bits (114), Expect = 4e-08
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 9/66 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGGA+GIG+A++  LA  G  V + DL  E    VAA +++   +            
Sbjct: 2  AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIG--------- 52

Query: 69 IRCDVT 74
          + C+VT
Sbjct: 53 LECNVT 58

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 5e-08
 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 12/69 (17%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G  A VTGGA+ IG A++ AL   G  V +VD+  + G  VAA           +LG   
Sbjct: 6  GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAA-----------SLG-ER 53

Query: 66 AMFIRCDVT 74
          A FI  D+T
Sbjct: 54 ARFIATDIT 62

Length = 261

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.9 bits (112), Expect = 1e-07
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 10/75 (13%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M+LK  +   +TGGA G+GRA++  LA KG  + ++DL++EK  E  A       +    
Sbjct: 1  MDLKDKVIV-ITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTE---- 55

Query: 61 LGFPSAMFIRCDVTN 75
                     +VT+
Sbjct: 56 -----VRGYAANVTD 65

Length = 253

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 46.5 bits (111), Expect = 1e-07
 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 9/66 (13%)

Query: 11  VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIR 70
           VTG  SGIGR  +LA A +G  V   D+ E      A L+    A  H+          R
Sbjct: 320 VTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAY---------R 370

Query: 71  CDVTNT 76
            DV++ 
Sbjct: 371 VDVSDA 376

Length = 582

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 11/67 (16%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE--NAKFHSNLGFPSA 66
            +TG  SGIG+  +  LA +G  V +   +EEKG E AA ++KE  NAK          
Sbjct: 4  VVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVE-------- 55

Query: 67 MFIRCDV 73
            I+ D+
Sbjct: 56 -VIQLDL 61

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.8 bits (109), Expect = 2e-07
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAK 56
           +   G +A +TG   GIGRA+++ALA +GV V ++  +EE    VA  VE    K
Sbjct: 2  AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVK 57

Length = 239

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 10/69 (14%)

Query: 8  SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN-EVAALVEKENAKFHSNLGFPSA 66
           A VTG A G+GRA++L LA  G  V V   S+E+   E+   VE    +          
Sbjct: 8  VALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQ-------- 59

Query: 67 MFIRCDVTN 75
            ++ DVT+
Sbjct: 60 -AVQADVTD 67

Length = 249

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 45.7 bits (109), Expect = 2e-07
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TGG+SGIG+AL+  L  +G  V +V  SE K  E    +E E       +      +
Sbjct: 4  VLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVS-----Y 58

Query: 69 IRCDVTN 75
          I  D+++
Sbjct: 59 ISADLSD 65

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 45.6 bits (108), Expect = 2e-07
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG +SGIGRA++ ALA +G  V V     E+         +  A      G   A  
Sbjct: 8  ALVTGASSGIGRAIARALAREGARVVVAARRSEEEA------AEALAAAIKEAGGGRAAA 61

Query: 69 IRCDVTN 75
          +  DV++
Sbjct: 62 VAADVSD 68

Length = 251

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 45.7 bits (109), Expect = 2e-07
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query: 8  SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENA 55
          S F+TG ASGIGRA +L  A +G  V   D++E     +AA +   NA
Sbjct: 3  SIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNA 50

Length = 260

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 45.5 bits (108), Expect = 3e-07
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG   GIG A++  L   G  V +VD +EE     A  + K+  K         A+ 
Sbjct: 5  ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGK---------AIA 55

Query: 69 IRCDVTN 75
          ++ DV++
Sbjct: 56 VKADVSD 62

Length = 256

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 45.0 bits (107), Expect = 5e-07
 Identities = 20/59 (33%), Positives = 27/59 (45%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHS 59
               G  A VTG A G+G A + ALA  G  V   D    +  E+AA +E    + H+
Sbjct: 2  ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHA 60

Length = 250

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 6e-07
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 13/76 (17%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M L+ G  A +TG ASGIG A++     +G  V + D+   +    A  +          
Sbjct: 2  MRLQ-GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG--------- 51

Query: 61 LGFPSAMFIRCDVTNT 76
             P+A+ +  DVT  
Sbjct: 52 ---PAAIAVSLDVTRQ 64

Length = 257

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 1e-06
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 14/71 (19%)

Query: 5  PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFP 64
           G  A +TGG SGIG A +  LA +G  V V D+  E G   A  V              
Sbjct: 6  AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-------------- 51

Query: 65 SAMFIRCDVTN 75
            +F+  DVT+
Sbjct: 52 GGLFVPTDVTD 62

Length = 255

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 44.2 bits (104), Expect = 1e-06
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 11/73 (15%)

Query: 9   AFVTGGASGIGRALSLALAGKGVFVTVVDL--SEEKGNEVAALVEKENAKFHSNLGFPSA 66
           A VTGG SGIGRA ++A A +G  V +  L   EE   +V  ++E+   K         A
Sbjct: 52  ALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRK---------A 102

Query: 67  MFIRCDVTNTKFA 79
           + +  D+++ KFA
Sbjct: 103 VLLPGDLSDEKFA 115

Length = 294

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 43.9 bits (104), Expect = 1e-06
 Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGGASGIG A++  LA +G  V V D+  E   +VA   +          G P A+ 
Sbjct: 4  ALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQ----------GGPRALG 53

Query: 69 IRCDVTNT 76
          ++CDVT+ 
Sbjct: 54 VQCDVTSE 61

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 43.6 bits (103), Expect = 1e-06
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 9/69 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGGA GIG+ ++  LA  G  V V DL+EE   E A  + +   K         A+ 
Sbjct: 3  ALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGK---------AVA 53

Query: 69 IRCDVTNTK 77
           + DV++  
Sbjct: 54 YKLDVSDKD 62

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 43.2 bits (102), Expect = 2e-06
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 10/69 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG + GIGRA++  LA +G  + + DL + ++  EV A V     +         A+
Sbjct: 4  AIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRR---------AI 54

Query: 68 FIRCDVTNT 76
          + + D+   
Sbjct: 55 YFQADIGEL 63

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 12/70 (17%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G  A VTGGASGIG A++   A KG  V ++D SE+   EVAA +   NAK         
Sbjct: 15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED-VAEVAAQLLGGNAKGLV------ 67

Query: 66 AMFIRCDVTN 75
               CDV++
Sbjct: 68 -----CDVSD 72

Length = 255

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 23/51 (45%), Positives = 29/51 (56%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE 51
          ++   GL   VTGGASGIGRA++ A A  G  V V D+SE      AA + 
Sbjct: 6  LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP 56

Length = 264

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 42.9 bits (101), Expect = 2e-06
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 10/69 (14%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G  A VTGGA+GIG ++       G  V +VDL ++ G  V   +  E          P+
Sbjct: 18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGE----------PN 67

Query: 66 AMFIRCDVT 74
            F  CDVT
Sbjct: 68 VCFFHCDVT 76

Length = 280

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 42.7 bits (101), Expect = 3e-06
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 8/72 (11%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G  A VTGG+ GIG A++ ALA  G  V ++  S  +  E A  + K+            
Sbjct: 8  GKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGV--------K 59

Query: 66 AMFIRCDVTNTK 77
              +CDV++ +
Sbjct: 60 TKAYKCDVSSQE 71

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 42.7 bits (101), Expect = 3e-06
 Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 9/70 (12%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G +A VTG ASGIG A++ ALA  G  V V D  EE     A +               S
Sbjct: 1  GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGG---------S 51

Query: 66 AMFIRCDVTN 75
           +++  DVT 
Sbjct: 52 VIYLPADVTK 61

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 3e-06
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
            VTG A GIG  L+  L  +G  + +VDL E +   +AA
Sbjct: 12 VVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAA 51

Length = 296

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 42.6 bits (100), Expect = 4e-06
 Identities = 22/51 (43%), Positives = 31/51 (60%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAK 56
          G +A VTG ASGIG+ ++L LA  G  V + DL+++  N VA  + K   K
Sbjct: 7  GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGK 57

Length = 262

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 17/48 (35%), Positives = 23/48 (47%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAK 56
           FVTG ASGIGRA +L LA +G  + + D   +   +  A        
Sbjct: 3  CFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGT 50

Length = 272

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 11 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIR 70
          VTGGASGIG A+SL LA +G    +   S         L   +          P A F++
Sbjct: 12 VTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQ----------PRAEFVQ 61

Query: 71 CDVTNT 76
           D+T+ 
Sbjct: 62 VDLTDD 67

Length = 258

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 42.1 bits (99), Expect = 4e-06
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG  +GIG+ +++  A  G  V V D++ +  N V   +++   +         A  
Sbjct: 14 AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---------AFA 64

Query: 69 IRCDVTN 75
           RCD+T+
Sbjct: 65 CRCDITS 71

Length = 255

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 5e-06
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 9/73 (12%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG A GIG+A + ALA +G  V V D++ E    VA  +  +           +A+ 
Sbjct: 9  AIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGG---------TAIA 59

Query: 69 IRCDVTNTKFALA 81
          ++ DV++   A A
Sbjct: 60 VQVDVSDPDSAKA 72

Length = 250

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 41.8 bits (98), Expect = 6e-06
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 6   GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN--EVAALVEKENAK 56
           G  A +TG  SGIGRA ++A A +G  + +  L EE+ +  EV  L++ E  K
Sbjct: 55  GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRK 107

Length = 300

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 41.4 bits (98), Expect = 7e-06
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 10/70 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG + GIGRA++L LA +G  V +   S EE   EV   ++    K         A+
Sbjct: 1  ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVK---------AL 51

Query: 68 FIRCDVTNTK 77
           + CDV++ +
Sbjct: 52 GVVCDVSDRE 61

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 41.4 bits (97), Expect = 8e-06
 Identities = 19/53 (35%), Positives = 27/53 (50%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFH 58
          G  A VTG +SGIG A + ALA +G  V +     ++   +A  +E E  K  
Sbjct: 3  GKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKAL 55

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 41.3 bits (97), Expect = 9e-06
 Identities = 20/47 (42%), Positives = 28/47 (59%)

Query: 8  SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKEN 54
          + F+TG ASGIGR  +L  A  G FV + D+ E+    +AA +  EN
Sbjct: 2  AIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAEN 48

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 41.3 bits (97), Expect = 9e-06
 Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV 50
          M L  G  A VTG  SGIGRA +   A +G  V V D   E    VAA +
Sbjct: 1  MRLA-GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAI 49

Length = 252

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 14/76 (18%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M+L  G +  +TGG SGIG AL+      G  V +    EE+  E    +          
Sbjct: 1  MKL-TGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKEL---------- 49

Query: 61 LGFPSAMFIRCDVTNT 76
             P+   I  DV + 
Sbjct: 50 ---PNIHTIVLDVGDA 62

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 9/75 (12%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M L+ G  A VTG + GIGRA++  LA +G  V +   S E G E  ALV +  A     
Sbjct: 1  MSLE-GKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAE--ALVAEIGA----- 52

Query: 61 LGFPSAMFIRCDVTN 75
          LG   A+ ++ DV++
Sbjct: 53 LGG-KALAVQGDVSD 66

Length = 248

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 40.9 bits (96), Expect = 1e-05
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 8/67 (11%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          AFVTG  SGIG+ +++ LA  G  V + DL  + G         E A+     G   A+ 
Sbjct: 11 AFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDG-------LAETAEHIEAAG-RRAIQ 62

Query: 69 IRCDVTN 75
          I  DVT+
Sbjct: 63 IAADVTS 69

Length = 254

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 12/76 (15%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA-LVEKENAKFHS 59
          M    G  A +TGG+ GIG A++ AL  +G  V +    +++  E AA L  K N     
Sbjct: 1  MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNV---- 56

Query: 60 NLGFPSAMFIRCDVTN 75
           LG         DV +
Sbjct: 57 -LGLA------ADVRD 65

Length = 237

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGGA G+G A +  L  +G  V + D+ +E+G   AA +               A F
Sbjct: 8  AIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDA------------ARF 55

Query: 69 IRCDVTN 75
             DVT+
Sbjct: 56 FHLDVTD 62

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TGG   +G A++  LA  G  V ++D ++EK   V A ++    +         A+ 
Sbjct: 13 AVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGE---------ALA 63

Query: 69 IRCDVTN 75
          ++ DV +
Sbjct: 64 VKADVLD 70

Length = 278

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 39.7 bits (93), Expect = 3e-05
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 8/71 (11%)

Query: 5  PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFP 64
              A +TG A GIGRA++  LA  G  + + DL+ E+    A    +E ++   N    
Sbjct: 1  MSKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEA---AKSTIQEISEAGYN---- 53

Query: 65 SAMFIRCDVTN 75
           A+ +  DVT+
Sbjct: 54 -AVAVGADVTD 63

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 17/44 (38%), Positives = 27/44 (61%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK 52
          A VTG   GIG+A +  LA +G  V ++  ++EK + VA  +E+
Sbjct: 4  AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEE 47

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 10/67 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTGG+ GIG+A++L LA +G  V +    S++   EVAA +E+   K         A+
Sbjct: 1  ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGK---------AV 51

Query: 68 FIRCDVT 74
           +R DV+
Sbjct: 52 VVRADVS 58

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 5e-05
 Identities = 18/43 (41%), Positives = 23/43 (53%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
          G  A +TGG SGIGRAL      +G  V V++ S EK   +  
Sbjct: 6  GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQ 48

Length = 263

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 38.8 bits (90), Expect = 6e-05
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 1  MELK-PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA 47
          M++K  G  A VTGG  GIGR  +L LA +G  V V D+ +E G    
Sbjct: 10 MKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATV 57

Length = 169

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 38.9 bits (91), Expect = 6e-05
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG-NEVAALVEKENAK 56
          A VT   SGIG+A +L LA +G  + +   S+E+G  E A  V     +
Sbjct: 5  AIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVR 53

Length = 256

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 6e-05
 Identities = 18/43 (41%), Positives = 22/43 (51%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
          G  A VTG A GIG A++ A A +G  V + DL        AA
Sbjct: 7  GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAA 49

Length = 260

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 38.8 bits (91), Expect = 6e-05
 Identities = 19/50 (38%), Positives = 26/50 (52%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFH 58
            VTG A GIG A++ ALA  G  V  VD + E+  E+ A + +    F 
Sbjct: 1  VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFA 50

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 7e-05
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 9/64 (14%)

Query: 11 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIR 70
          +TG + GIGRAL++ LA  G  + +   +E +   +A+L ++        L  P      
Sbjct: 6  ITGASEGIGRALAVRLARAGAQLVLAARNETR---LASLAQELADHGGEALVVP------ 56

Query: 71 CDVT 74
           DV+
Sbjct: 57 TDVS 60

Length = 263

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 38.8 bits (91), Expect = 7e-05
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 9/75 (12%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M+   G  A +TG ASG G A +   A  G+ + + D+ ++  +   A +  + A+    
Sbjct: 1  MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAE---- 56

Query: 61 LGFPSAMFIRCDVTN 75
                + +R DV++
Sbjct: 57 -----VLGVRTDVSD 66

Length = 287

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 38.7 bits (90), Expect = 8e-05
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKF 57
          G  A VTGG  GIG+ + L     G  V   D+ EE+G + A   E  N  F
Sbjct: 1  GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEA-EGPNLFF 51

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 38.5 bits (90), Expect = 9e-05
 Identities = 20/43 (46%), Positives = 25/43 (58%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
          G  A +TGG SG+GRAL      +G  V V+D S EK  E+ A
Sbjct: 4  GEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRA 46

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 9e-05
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 9/65 (13%)

Query: 11  VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIR 70
           +TG +SGIGRA ++ +A  G  V +V  + E  +E+ A +  +    H    +       
Sbjct: 376 ITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAH---AYT------ 426

Query: 71  CDVTN 75
           CD+T+
Sbjct: 427 CDLTD 431

Length = 657

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 38.4 bits (89), Expect = 1e-04
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE 51
           VTGGA  IG  L   L   G  V  +D   +  + + + VE
Sbjct: 4  LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVE 45

Length = 314

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 38.4 bits (89), Expect = 1e-04
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 9/70 (12%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
            +A VTGG  GIG A     A +G  V V DL+ E   +VAA +  +            
Sbjct: 3  DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGN--------- 53

Query: 66 AMFIRCDVTN 75
          A    CD+T+
Sbjct: 54 AQAFACDITD 63

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 38.2 bits (89), Expect = 1e-04
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 8/69 (11%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A V GG   +G  L   LA  G  V V D++ E   +VA   ++ NA++        A  
Sbjct: 5  AVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVA---DEINAEYGEK-----AYG 56

Query: 69 IRCDVTNTK 77
             D TN +
Sbjct: 57 FGADATNEQ 65

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 8/77 (10%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
               G +A +TG +SGIG  L+  LA +G  + +V   E+K   +A  +E +       
Sbjct: 1  PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGV---- 56

Query: 61 LGFPSAMFIRCDVTNTK 77
                  I  D+++ +
Sbjct: 57 ----EVEVIPADLSDPE 69

Length = 265

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 17/47 (36%), Positives = 23/47 (48%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK 52
          G +A VTGG SG+G   + ALA  G  V V     +   E  A ++ 
Sbjct: 26 GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDG 72

Length = 315

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 38.0 bits (88), Expect = 1e-04
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 12/70 (17%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G +A +TG A GIGRA + A   +G  V + D++ E     AA +             P+
Sbjct: 3  GKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIG------------PA 50

Query: 66 AMFIRCDVTN 75
          A  I  DVT+
Sbjct: 51 ACAISLDVTD 60

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 37.9 bits (88), Expect = 1e-04
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 8/64 (12%)

Query: 11 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIR 70
          VTGG+ GIGR +  A    G  V      E  G  + + + +         G  S  F+ 
Sbjct: 14 VTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRA--------GPGSCKFVP 65

Query: 71 CDVT 74
          CDVT
Sbjct: 66 CDVT 69

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 37.9 bits (88), Expect = 1e-04
 Identities = 18/35 (51%), Positives = 22/35 (62%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE 40
          G    VTG A GIGR ++  LAG+G  V +VD SE
Sbjct: 4  GKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSE 38

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 37.9 bits (88), Expect = 1e-04
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 8/75 (10%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          ME   G  A VTG + GIG A++ AL   G+ V       +K   +AA  +         
Sbjct: 1  MERWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSA------- 53

Query: 61 LGFPSAMFIRCDVTN 75
           G+P+    +CD++N
Sbjct: 54 -GYPTLFPYQCDLSN 67

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 10/69 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG-NEVAALVEKENAKFHSNLGFPSAM 67
          A VTGG  GIG  ++ ALA  G  + + D  +++        +     +          +
Sbjct: 5  ALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE---------VI 55

Query: 68 FIRCDVTNT 76
          F   DV + 
Sbjct: 56 FFPADVADL 64

Length = 256

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL----SEEKGNEVAALVEKENAKFH 58
            +TGG+ G+GRA+++ LA  G  V V+D+       + + VAA +E    K  
Sbjct: 9  VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKAL 62

Length = 249

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 37.4 bits (87), Expect = 2e-04
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 6/66 (9%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          AF+TG A G+GRA++  +A +G  V + D+++  G  + A   + NA      G   A  
Sbjct: 2  AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAG--LDAFAAEINA----AHGEGVAFA 55

Query: 69 IRCDVT 74
             DVT
Sbjct: 56 AVQDVT 61

Length = 251

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 18/65 (27%), Positives = 24/65 (36%), Gaps = 18/65 (27%)

Query: 11 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIR 70
          VTGG+SGIG A+   L   G  V   D+                   H N       F+ 
Sbjct: 14 VTGGSSGIGLAIVKELLANGANVVNADI-------------HGGDGQHENY-----QFVP 55

Query: 71 CDVTN 75
           DV++
Sbjct: 56 TDVSS 60

Length = 266

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 9/70 (12%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G  A +TG + GIG A++ A A  G  +   D+++E  ++  A   +   + H       
Sbjct: 10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHG------ 63

Query: 66 AMFIRCDVTN 75
               CDVT+
Sbjct: 64 ---YVCDVTD 70

Length = 265

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 8/69 (11%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TG A  IG+A   AL   G  + + D++     ++   +         NL     + 
Sbjct: 5  ILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELT--------NLYKNRVIA 56

Query: 69 IRCDVTNTK 77
          +  D+T+ +
Sbjct: 57 LELDITSKE 65

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 5  PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE 40
           G + +VTG A GIG A++LA    G  V   D + 
Sbjct: 7  SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF 42

Length = 252

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.1 bits (86), Expect = 3e-04
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAK 56
          G  A VTG A+G+GRA +L LA  G  V V D+ S    ++V   +    AK
Sbjct: 12 GKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAK 63

Length = 306

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 37.2 bits (86), Expect = 3e-04
 Identities = 18/48 (37%), Positives = 28/48 (58%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE 53
          G S  +TG  SGIG+A +LA+A +G  V +V  ++ +  E    +E E
Sbjct: 1  GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETE 48

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 37.0 bits (86), Expect = 3e-04
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKFHS 59
          G  A VTGG +G+G+  ++ALA  G  + +T    + +   E   L+EKE  K   
Sbjct: 15 GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWD---ETRRLIEKEGRKVTF 67

Length = 258

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 13/73 (17%)

Query: 11 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIR 70
          +TGGA GIG A + ALA  G  V + DL E    E AA                  +   
Sbjct: 10 ITGGARGIGLATARALAALGARVAIGDLDEALAKETAA-------------ELGLVVGGP 56

Query: 71 CDVTNTKFALAFL 83
           DVT+     AFL
Sbjct: 57 LDVTDPASFAAFL 69

Length = 273

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 7/74 (9%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFI 69
           +TG    IG AL  A+   G  V   D+ +E  NE+   + KE               +
Sbjct: 8  LITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKE-------FKSKKLSLV 60

Query: 70 RCDVTNTKFALAFL 83
            D+T+ +    FL
Sbjct: 61 ELDITDQESLEEFL 74

Length = 256

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 36.5 bits (85), Expect = 5e-04
 Identities = 18/48 (37%), Positives = 27/48 (56%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
          M L     A +TG +SGIG+A +LA A  G  + +V  S++    +AA
Sbjct: 1  MSLNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAA 48

Length = 241

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 36.3 bits (84), Expect = 5e-04
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHS 59
          G  A VTG  +G+G+ +++ LA  G  +     SE    E    VE    +F S
Sbjct: 5  GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPS--ETQQQVEALGRRFLS 56

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 8/67 (11%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          AF+TGG +GIG+A++ A A  G  V +     E     A    +E +          A  
Sbjct: 6  AFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAA----EEISSATGG----RAHP 57

Query: 69 IRCDVTN 75
          I+CDV +
Sbjct: 58 IQCDVRD 64

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 36.3 bits (84), Expect = 6e-04
 Identities = 15/33 (45%), Positives = 25/33 (75%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEE 41
          A +TG ++GIG+A ++ALA +G +V  VD++E 
Sbjct: 9  AVITGASTGIGQASAIALAQEGAYVLAVDIAEA 41

Length = 272

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 19/58 (32%), Positives = 26/58 (44%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFH 58
          M    G  A +TG +SGIG A + ALA  G  V +    EE+   +A  +    A   
Sbjct: 1  MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALAL 58

Length = 246

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 11/77 (14%)

Query: 1  MELKPGLS--AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFH 58
          M LKP       +TG ++G+GRA + A A +G  V ++   EE    +AA +     +  
Sbjct: 1  MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGE-- 58

Query: 59 SNLGFPSAMFIRCDVTN 75
                 A+ +  DV +
Sbjct: 59 -------ALAVVADVAD 68

Length = 334

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 8  SAFVTGGASGIGRALSLALAGKGVFVTV-VDLSEEKGNEVAA 48
          +A VTG A  IGRA++L LA  G  V V  + S ++   +AA
Sbjct: 11 AALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAA 52

Length = 258

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 36.1 bits (84), Expect = 7e-04
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK 42
          A VT  +SGIG A++ ALA +G  V +   + E 
Sbjct: 4  ALVTAASSGIGLAIARALAREGARVAICARNREN 37

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 35.7 bits (83), Expect = 9e-04
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 16/71 (22%)

Query: 9  AFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSA 66
            +TG +SGIG AL+LALA +G  V  T  +  +         +E      + NL     
Sbjct: 3  VLITGCSSGIGLALALALAAQGYRVIATARNPDK---------LESLGELLNDNL-EV-- 50

Query: 67 MFIRCDVTNTK 77
            +  DVT+ +
Sbjct: 51 --LELDVTDEE 59

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 11 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE 51
          +TG +SGIGRA +LA A +G  V +   S E  +E+A  V 
Sbjct: 5  ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVR 45

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 10/72 (13%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFP 64
          G  A VTGG  G+G A++ A A +G   + +   + EKG   AA +E   AK        
Sbjct: 6  GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAK-------- 57

Query: 65 SAMFIRCDVTNT 76
           A+F++ D+++ 
Sbjct: 58 -AVFVQADLSDV 68

Length = 260

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 35.3 bits (82), Expect = 0.001
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHS 59
            VTG A GIGR ++L  A +G  V +VD SE   +EVAA +     +  +
Sbjct: 11 VVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVAAELRAAGGEALA 60

Length = 260

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 35.2 bits (81), Expect = 0.001
 Identities = 17/43 (39%), Positives = 25/43 (58%)

Query: 11 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE 53
          VTG + GIGR  +L  A  G  V ++  +EEK  +VA  + +E
Sbjct: 9  VTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEE 51

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 35.1 bits (81), Expect = 0.001
 Identities = 19/43 (44%), Positives = 26/43 (60%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
          G  A +T  A GIGRA++LA A +G  V   D++EEK  E+  
Sbjct: 2  GKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELER 44

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 35.3 bits (82), Expect = 0.001
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAK 56
          G +  V GG SGI   ++ A A  G  V V   S+EK +   A +++   +
Sbjct: 9  GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPE 59

Length = 264

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 35.1 bits (81), Expect = 0.001
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 12/72 (16%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDL--SEEKGNEVAALVEKENAKFHSNLGF 63
          G  A VTG +SGIG+A+++ LA  G  V VV+    E+   EV   ++    K       
Sbjct: 3  GKVALVTGASSGIGKAIAIRLATAGANV-VVNYRSKEDAAEEVVEEIKAVGGK------- 54

Query: 64 PSAMFIRCDVTN 75
            A+ ++ DV+ 
Sbjct: 55 --AIAVQADVSK 64

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL 49
          M LK G    VTGGASG+GRA+      +G  V V+D S     E+ A 
Sbjct: 1  MRLK-GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA 48

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 34.8 bits (80), Expect = 0.002
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 20/67 (29%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGG+ GIG+A+   L  +G  V   D+ E   N+V                     +
Sbjct: 9  AIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD--------------------Y 48

Query: 69 IRCDVTN 75
           + DV+N
Sbjct: 49 FKVDVSN 55

Length = 258

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 34.5 bits (80), Expect = 0.002
 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 6/67 (8%)

Query: 8  SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          +  +TGG  G+G AL+  LA +G    V+          A LV +  A     LG     
Sbjct: 2  TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEA-----LGA-EVT 55

Query: 68 FIRCDVT 74
             CDV 
Sbjct: 56 VAACDVA 62

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 34.8 bits (80), Expect = 0.002
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 3/51 (5%)

Query: 8  SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFH 58
          +A VTG + GIG A +  L  +G  V    +       +AA   +E     
Sbjct: 2  AALVTGASRGIGEATARLLHAEGYRVG---ICARDEARLAAAAAQELEGVL 49

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 34.7 bits (80), Expect = 0.002
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTV-VDLSEEKGNEVAALVEK 52
            LK      VTG   GIGRA+++ LA +G  V V      E+ NE   +V++
Sbjct: 2  YSLK-DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE 53

Length = 252

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 34.3 bits (79), Expect = 0.002
 Identities = 16/40 (40%), Positives = 23/40 (57%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45
          G +A VTGG  GIG A+   LAG G  V     ++++ +E
Sbjct: 6  GKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDE 45

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 34.3 bits (80), Expect = 0.003
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 4/42 (9%)

Query: 3   LKPGLSAFVTGGASGIGR-ALSLA-LAGKGVFVTVVDLSEEK 42
           LK G +  + GGASG+G  A+ LA   G  V  T    SEEK
Sbjct: 137 LKAGETVLIHGGASGVGTAAIQLAKALGARVIATAG--SEEK 176

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 34.4 bits (79), Expect = 0.003
 Identities = 15/31 (48%), Positives = 24/31 (77%)

Query: 11 VTGGASGIGRALSLALAGKGVFVTVVDLSEE 41
          +TGG SG+G A ++ LA +G  +++VDL+EE
Sbjct: 8  ITGGGSGLGLATAVRLAKEGAKLSLVDLNEE 38

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 34.2 bits (79), Expect = 0.003
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAK 56
          G  A VTG  +G+G   + ALA KG  V + V +L  +KG   AA +      
Sbjct: 16 GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNL--DKGKAAAARITAATPG 66

Length = 306

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 34.3 bits (79), Expect = 0.003
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAK 56
          A VTG + GIG+A++L LA +G  + V    S +   E A  +E    K
Sbjct: 7  ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRK 55

Length = 250

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 33.9 bits (78), Expect = 0.004
 Identities = 19/44 (43%), Positives = 26/44 (59%)

Query: 5  PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
           G  AFVTG + GIGRA++L LA  G  V V   +  +G+  +A
Sbjct: 2  SGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSA 45

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 34.1 bits (79), Expect = 0.004
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 9  AFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKG 43
          A VTG +SGIGRA +  LA  G  VF T  + +    
Sbjct: 7  ALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP 43

Length = 270

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 34.0 bits (78), Expect = 0.004
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 13/59 (22%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-------------SEEKGNEVAALVE 51
          G  AF+TG A G GRA ++ LA +G  +  +DL             + E  +E A LVE
Sbjct: 3  GKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVE 61

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 33.9 bits (78), Expect = 0.004
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 8/52 (15%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVD--------LSEEKGNEVAAL 49
          G S  VTG +SGIGRA ++ALA +G  V            L+ E G E   L
Sbjct: 9  GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL 60

Length = 245

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 33.8 bits (78), Expect = 0.004
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTV-VDLSEEKGNEVAALVEKENAK 56
          A VTG A  IGRA++ ALA +G  V V  + SE +   +   +      
Sbjct: 3  ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNS 51

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 33.6 bits (77), Expect = 0.004
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
          A VTG  +GIG A +  LA +G  V V D+       V A
Sbjct: 6  AIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVA 45

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 33.8 bits (77), Expect = 0.004
 Identities = 16/30 (53%), Positives = 22/30 (73%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTV 35
          G  A VTGGA GIG+A+++ALA +G  V +
Sbjct: 6  GKVAIVTGGAKGIGKAITVALAQEGAKVVI 35

Length = 247

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	85
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.72
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.65
PRK08862	227	short chain dehydrogenase; Provisional	99.65
PRK07478	254	short chain dehydrogenase; Provisional	99.65
PRK05854	313	short chain dehydrogenase; Provisional	99.64
PRK08339	263	short chain dehydrogenase; Provisional	99.64
PRK05867	253	short chain dehydrogenase; Provisional	99.64
KOG1208	314	consensus Dehydrogenases with different specificit	99.62
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.61
PRK06139	330	short chain dehydrogenase; Provisional	99.61
PRK07062	265	short chain dehydrogenase; Provisional	99.6
PRK05876	275	short chain dehydrogenase; Provisional	99.6
PRK07890	258	short chain dehydrogenase; Provisional	99.6
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.59
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.59
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.59
PRK08589	272	short chain dehydrogenase; Validated	99.59
PRK05866	293	short chain dehydrogenase; Provisional	99.59
PRK07035	252	short chain dehydrogenase; Provisional	99.59
PRK08303	305	short chain dehydrogenase; Provisional	99.58
PRK07063	260	short chain dehydrogenase; Provisional	99.58
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.58
PRK06172	253	short chain dehydrogenase; Provisional	99.57
PRK07109	334	short chain dehydrogenase; Provisional	99.57
PRK07576	264	short chain dehydrogenase; Provisional	99.57
PRK06720	169	hypothetical protein; Provisional	99.57
PRK07791	286	short chain dehydrogenase; Provisional	99.57
PRK06197	306	short chain dehydrogenase; Provisional	99.57
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.56
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.56
PRK08628	258	short chain dehydrogenase; Provisional	99.56
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.56
PRK06138	252	short chain dehydrogenase; Provisional	99.56
PRK07814	263	short chain dehydrogenase; Provisional	99.56
PRK08278	273	short chain dehydrogenase; Provisional	99.56
PRK06194	287	hypothetical protein; Provisional	99.56
PRK06114	254	short chain dehydrogenase; Provisional	99.55
PRK09072	263	short chain dehydrogenase; Provisional	99.55
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.55
PRK07825	273	short chain dehydrogenase; Provisional	99.55
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.55
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.55
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.55
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.55
KOG0725	270	consensus Reductases with broad range of substrate	99.55
PRK08265	261	short chain dehydrogenase; Provisional	99.54
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.54
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.54
PRK07774	250	short chain dehydrogenase; Provisional	99.54
PRK08643	256	acetoin reductase; Validated	99.54
PRK07454	241	short chain dehydrogenase; Provisional	99.53
PRK07677	252	short chain dehydrogenase; Provisional	99.53
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.53
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.53
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.53
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.53
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.53
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.52
PRK06125	259	short chain dehydrogenase; Provisional	99.52
PRK09242	257	tropinone reductase; Provisional	99.52
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.52
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.52
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.52
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.52
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.52
PRK09186	256	flagellin modification protein A; Provisional	99.52
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.51
PRK05872	296	short chain dehydrogenase; Provisional	99.51
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.51
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.51
PRK07904	253	short chain dehydrogenase; Provisional	99.5
PRK08251	248	short chain dehydrogenase; Provisional	99.5
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.5
PRK07067	257	sorbitol dehydrogenase; Provisional	99.5
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.5
PLN02253	280	xanthoxin dehydrogenase	99.5
PRK12939	250	short chain dehydrogenase; Provisional	99.5
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.5
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.5
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.5
PRK06949	258	short chain dehydrogenase; Provisional	99.5
PRK05599	246	hypothetical protein; Provisional	99.49
PRK07024	257	short chain dehydrogenase; Provisional	99.49
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.49
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.49
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.49
PRK06196	315	oxidoreductase; Provisional	99.48
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.48
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.48
PRK08226	263	short chain dehydrogenase; Provisional	99.48
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.48
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.48
PRK05717	255	oxidoreductase; Validated	99.48
PLN02780	320	ketoreductase/ oxidoreductase	99.47
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.47
PRK07806	248	short chain dehydrogenase; Provisional	99.47
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.47
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.47
PRK12937	245	short chain dehydrogenase; Provisional	99.47
PRK05875	276	short chain dehydrogenase; Provisional	99.46
PRK07326	237	short chain dehydrogenase; Provisional	99.46
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.46
PRK06128	300	oxidoreductase; Provisional	99.45
PRK07102	243	short chain dehydrogenase; Provisional	99.45
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.45
PRK12828	239	short chain dehydrogenase; Provisional	99.45
PRK07201	657	short chain dehydrogenase; Provisional	99.45
PRK05855	582	short chain dehydrogenase; Validated	99.45
PRK07985	294	oxidoreductase; Provisional	99.45
PRK12746	254	short chain dehydrogenase; Provisional	99.44
PRK07856	252	short chain dehydrogenase; Provisional	99.44
PRK06914	280	short chain dehydrogenase; Provisional	99.44
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.44
PRK12743	256	oxidoreductase; Provisional	99.44
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.44
PRK06701	290	short chain dehydrogenase; Provisional	99.44
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.44
PRK12744	257	short chain dehydrogenase; Provisional	99.44
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.44
PRK12747	252	short chain dehydrogenase; Provisional	99.44
PRK07831	262	short chain dehydrogenase; Provisional	99.44
PRK05650	270	short chain dehydrogenase; Provisional	99.43
PRK06940	275	short chain dehydrogenase; Provisional	99.43
PRK06500	249	short chain dehydrogenase; Provisional	99.43
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.43
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.43
PRK09134	258	short chain dehydrogenase; Provisional	99.43
PRK06484	520	short chain dehydrogenase; Validated	99.43
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.42
PRK07775	274	short chain dehydrogenase; Provisional	99.42
PRK06398	258	aldose dehydrogenase; Validated	99.42
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.42
PRK06198	260	short chain dehydrogenase; Provisional	99.42
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.41
PRK09135	249	pteridine reductase; Provisional	99.41
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.41
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.41
PRK06181	263	short chain dehydrogenase; Provisional	99.41
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.4
PRK06101	240	short chain dehydrogenase; Provisional	99.4
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.4
PRK06057	255	short chain dehydrogenase; Provisional	99.4
PRK07832	272	short chain dehydrogenase; Provisional	99.39
PRK06123	248	short chain dehydrogenase; Provisional	99.39
PRK06483	236	dihydromonapterin reductase; Provisional	99.39
PRK08267	260	short chain dehydrogenase; Provisional	99.38
PRK06841	255	short chain dehydrogenase; Provisional	99.38
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.38
PRK06182	273	short chain dehydrogenase; Validated	99.37
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.37
PRK09291	257	short chain dehydrogenase; Provisional	99.37
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.37
PRK12829	264	short chain dehydrogenase; Provisional	99.37
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.37
PRK06484	520	short chain dehydrogenase; Validated	99.37
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.37
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.37
PRK08264	238	short chain dehydrogenase; Validated	99.37
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.37
PRK05993	277	short chain dehydrogenase; Provisional	99.37
PRK08263	275	short chain dehydrogenase; Provisional	99.36
PRK07074	257	short chain dehydrogenase; Provisional	99.36
PRK06180	277	short chain dehydrogenase; Provisional	99.36
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.36
PRK08703	239	short chain dehydrogenase; Provisional	99.36
PRK12827	249	short chain dehydrogenase; Provisional	99.35
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.34
PRK10538	248	malonic semialdehyde reductase; Provisional	99.34
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.33
PLN00015	308	protochlorophyllide reductase	99.33
PRK06924	251	short chain dehydrogenase; Provisional	99.33
PRK07060	245	short chain dehydrogenase; Provisional	99.33
PRK06482	276	short chain dehydrogenase; Provisional	99.33
PRK06179	270	short chain dehydrogenase; Provisional	99.33
PRK06523	260	short chain dehydrogenase; Provisional	99.32
PRK05884	223	short chain dehydrogenase; Provisional	99.32
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.3
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.3
PLN03209	576	translocon at the inner envelope of chloroplast su	99.3
COG1028	251	FabG Dehydrogenases with different specificities (	99.29
PRK07069	251	short chain dehydrogenase; Validated	99.29
PRK08177	225	short chain dehydrogenase; Provisional	99.28
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.28
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.28
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.28
PRK08324	681	short chain dehydrogenase; Validated	99.27
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.27
PRK05693	274	short chain dehydrogenase; Provisional	99.26
PRK07041	230	short chain dehydrogenase; Provisional	99.26
PRK12742	237	oxidoreductase; Provisional	99.26
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.25
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.25
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.24
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.24
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.24
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.23
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.22
PLN02583	297	cinnamoyl-CoA reductase	99.21
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.21
PLN02240	352	UDP-glucose 4-epimerase	99.2
PLN02650	351	dihydroflavonol-4-reductase	99.2
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.19
PRK08017	256	oxidoreductase; Provisional	99.19
PRK07023	243	short chain dehydrogenase; Provisional	99.18
PRK06953	222	short chain dehydrogenase; Provisional	99.18
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.17
PRK12367	245	short chain dehydrogenase; Provisional	99.17
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.17
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.16
PRK08219	227	short chain dehydrogenase; Provisional	99.15
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.15
PLN02653	340	GDP-mannose 4,6-dehydratase	99.15
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.14
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.13
PRK08309	177	short chain dehydrogenase; Provisional	99.13
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.12
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.12
PLN02686	367	cinnamoyl-CoA reductase	99.12
PRK07577	234	short chain dehydrogenase; Provisional	99.12
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.11
PLN00198	338	anthocyanidin reductase; Provisional	99.1
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.1
PLN02214	342	cinnamoyl-CoA reductase	99.09
PLN02572	442	UDP-sulfoquinovose synthase	99.09
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.07
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.07
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.06
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.06
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.06
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.05
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.02
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.02
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.99
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.98
CHL00194	317	ycf39 Ycf39; Provisional	98.96
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.96
PRK09009	235	C factor cell-cell signaling protein; Provisional	98.95
PRK10675	338	UDP-galactose-4-epimerase; Provisional	98.93
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.93
PLN02427	386	UDP-apiose/xylose synthase	98.89
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.87
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.86
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.85
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	98.85
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	98.84
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.84
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	98.79
PRK07578	199	short chain dehydrogenase; Provisional	98.78
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.77
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	98.76
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	98.74
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.71
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.68
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	98.66
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.62
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.61
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.6
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.58
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.56
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.55
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.54
PLN02260	668	probable rhamnose biosynthetic enzyme	98.47
PLN02206	442	UDP-glucuronate decarboxylase	98.47
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.43
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	98.42
PRK05865	854	hypothetical protein; Provisional	98.41
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.39
PLN02503	605	fatty acyl-CoA reductase 2	98.38
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	98.34
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.34
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.29
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.29
PRK07201	657	short chain dehydrogenase; Provisional	98.26
PRK12320	699	hypothetical protein; Provisional	98.25
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.23
PLN02778	298	3,5-epimerase/4-reductase	98.23
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.22
PLN00016	378	RNA-binding protein; Provisional	98.22
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.21
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.14
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.14
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.13
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.13
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.13
PLN02996	491	fatty acyl-CoA reductase	98.12
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.11
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.1
PRK14982	340	acyl-ACP reductase; Provisional	98.07
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.96
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.95
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.94
PRK09620	229	hypothetical protein; Provisional	97.9
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	97.89
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	97.88
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.85
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	97.85
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.78
COG3320	382	Putative dehydrogenase domain of multifunctional n	97.76
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	97.73
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.73
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.7
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	97.7
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.69
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.68
PRK04148	134	hypothetical protein; Provisional	97.64
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.63
COG2910	211	Putative NADH-flavin reductase [General function p	97.63
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.61
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	97.6
PRK09496	453	trkA potassium transporter peripheral membrane com	97.56
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.5
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.47
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.41
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.37
PLN02260	668	probable rhamnose biosynthetic enzyme	97.33
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.31
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	97.3
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	97.26
PRK09496	453	trkA potassium transporter peripheral membrane com	97.24
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.23
PRK10669	558	putative cation:proton antiport protein; Provision	97.22
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.22
PRK06849	389	hypothetical protein; Provisional	97.19
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	97.14
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.14
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.13
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.12
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.11
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.05
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.04
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.04
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.03
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	97.02
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.01
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.01
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.98
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.97
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.97
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.96
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.95
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.94
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.93
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.93
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.92
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.91
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.9
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.9
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.9
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.9
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	96.89
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.87
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	96.86
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.86
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.85
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.84
PRK08655	437	prephenate dehydrogenase; Provisional	96.83
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.8
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.77
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.76
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	96.75
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.74
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.74
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.72
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.71
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.71
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.71
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.69
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.69
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.69
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.69
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.69
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.68
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.67
PRK08223	287	hypothetical protein; Validated	96.66
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.66
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.62
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.61
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.6
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.6
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.59
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.59
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.56
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.55
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.55
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.54
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.54
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.52
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.5
PLN02494	477	adenosylhomocysteinase	96.49
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.48
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.48
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.47
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.47
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.46
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.46
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	96.45
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.44
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.43
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.42
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.42
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.42
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.42
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.41
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.41
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.38
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.38
PLN00203	519	glutamyl-tRNA reductase	96.36
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.35
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.34
PRK13256	226	thiopurine S-methyltransferase; Reviewed	96.33
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	96.33
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.31
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.31
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.3
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.3
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.29
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.28
PF03848	192	TehB: Tellurite resistance protein TehB; InterPro:	96.27
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.26
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	96.26
PRK07411	390	hypothetical protein; Validated	96.26
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.25
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.24
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.23
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.23
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.22
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	96.21
PRK08328	231	hypothetical protein; Provisional	96.2
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.2
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.17
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.17
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	96.17
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.15
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.15
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.15
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.14
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	96.14
PRK13255	218	thiopurine S-methyltransferase; Reviewed	96.13
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.12
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.11
COG5322	351	Predicted dehydrogenase [General function predicti	96.1
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.09
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	96.08
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.07
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.07
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.05
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.05
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.03
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.02
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	96.02
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.02
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.99
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.98
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.98
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.97
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.95
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.93
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.92
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	95.92
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.92
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	95.91
PRK13243	333	glyoxylate reductase; Reviewed	95.91
PRK14851	679	hypothetical protein; Provisional	95.91
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.89
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	95.87
PRK13771	334	putative alcohol dehydrogenase; Provisional	95.87
PRK12480	330	D-lactate dehydrogenase; Provisional	95.86
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.84
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.84
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.82
PTZ00354	334	alcohol dehydrogenase; Provisional	95.81
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.8
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	95.79
PLN02928	347	oxidoreductase family protein	95.77
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	95.77
PRK07877	722	hypothetical protein; Provisional	95.76
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	95.75
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.74
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.74
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	95.73
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	95.72
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	95.71
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.71
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.71
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.67
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.66
PRK14852	989	hypothetical protein; Provisional	95.64
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.63
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	95.61
PLN02740	381	Alcohol dehydrogenase-like	95.61
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	95.6
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.58
PRK06487	317	glycerate dehydrogenase; Provisional	95.57
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.57
COG0190	283	FolD 5,10-methylene-tetrahydrofolate dehydrogenase	95.57
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	95.56
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.55
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	95.54
PLN03139	386	formate dehydrogenase; Provisional	95.52

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.72  E-value=8.3e-17  Score=97.71  Aligned_cols=71  Identities=27%  Similarity=0.328  Sum_probs=65.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||+++|||.+++++|+++|++|+++.|+.++++.+.+++...++..        +.++.+|++++++ +.+.++
T Consensus         6 ~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~--------v~vi~~DLs~~~~~~~l~~~   77 (265)
T COG0300           6 GKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVE--------VEVIPADLSDPEALERLEDE   77 (265)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCce--------EEEEECcCCChhHHHHHHHH
Confidence            8899999999999999999999999999999999999999999999877442        8899999999999 887764

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.65  E-value=7e-16  Score=94.37  Aligned_cols=75  Identities=25%  Similarity=0.332  Sum_probs=66.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||+++|||.++|..|++.|++++++.|..++++...+++++..+..       ++..+++|++|.++ ++
T Consensus         9 ~~~-~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-------~v~~~~~Dvs~~~~~~~   80 (282)
T KOG1205|consen    9 RLA-GKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-------KVLVLQLDVSDEESVKK   80 (282)
T ss_pred             HhC-CCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-------ccEEEeCccCCHHHHHH
Confidence            466 9999999999999999999999999999999999999999988888765541       48999999999999 98


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus        81 ~~~~   84 (282)
T KOG1205|consen   81 FVEW   84 (282)
T ss_pred             HHHH
Confidence            8754

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1.3e-15  Score=90.92  Aligned_cols=74  Identities=15%  Similarity=0.149  Sum_probs=64.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++...+..         +..+.+|++++++ +
T Consensus         1 ~~~~-~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~---------~~~~~~D~~~~~~~~   70 (227)
T PRK08862          1 MDIK-SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDN---------VYSFQLKDFSQESIR   70 (227)
T ss_pred             CCCC-CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCC---------eEEEEccCCCHHHHH
Confidence            7788 999999999999999999999999999999999998888887777654433         7889999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        71 ~~~~~   75 (227)
T PRK08862         71 HLFDA   75 (227)
T ss_pred             HHHHH
Confidence            88764

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.65  E-value=2e-15  Score=90.85  Aligned_cols=74  Identities=28%  Similarity=0.386  Sum_probs=64.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||.+++++|+++|++|++++|++++++.+.+++...+..         +.++.+|++++++ +
T Consensus         2 ~~~~-~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   71 (254)
T PRK07478          2 MRLN-GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGE---------AVALAGDVRDEAYAK   71 (254)
T ss_pred             CCCC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHH
Confidence            5667 899999999999999999999999999999999988887777777654433         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        72 ~~~~~   76 (254)
T PRK07478         72 ALVAL   76 (254)
T ss_pred             HHHHH
Confidence            88764

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.2e-15  Score=93.50  Aligned_cols=75  Identities=24%  Similarity=0.271  Sum_probs=64.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.++.+...+++....+.       .++.++.+|++|.++ ++
T Consensus        11 ~l~-gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~-------~~v~~~~~Dl~d~~sv~~   82 (313)
T PRK05854         11 DLS-GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPD-------AKLSLRALDLSSLASVAA   82 (313)
T ss_pred             ccC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCC-------CceEEEEecCCCHHHHHH
Confidence            356 899999999999999999999999999999999998888887777654322       228899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        83 ~~~~   86 (313)
T PRK05854         83 LGEQ   86 (313)
T ss_pred             HHHH
Confidence            8764

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.6e-15  Score=91.08  Aligned_cols=75  Identities=24%  Similarity=0.328  Sum_probs=63.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++.....        .++.++.+|++|+++ +
T Consensus         4 ~~l~-~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------~~~~~~~~Dv~~~~~i~   74 (263)
T PRK08339          4 IDLS-GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESN--------VDVSYIVADLTKREDLE   74 (263)
T ss_pred             cCCC-CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--------CceEEEEecCCCHHHHH
Confidence            3567 99999999999999999999999999999999998877777776654321        128899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        75 ~~~~~   79 (263)
T PRK08339         75 RTVKE   79 (263)
T ss_pred             HHHHH
Confidence            88764

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.3e-15  Score=90.54  Aligned_cols=74  Identities=23%  Similarity=0.409  Sum_probs=63.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||.+++++|+++|++|++++|+.+..+...+++...+..         +.++.+|++++++ +
T Consensus         5 ~~~~-~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~   74 (253)
T PRK05867          5 FDLH-GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGK---------VVPVCCDVSQHQQVT   74 (253)
T ss_pred             ccCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCe---------EEEEEccCCCHHHHH
Confidence            3466 899999999999999999999999999999999988888777777654433         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        75 ~~~~~   79 (253)
T PRK05867         75 SMLDQ   79 (253)
T ss_pred             HHHHH
Confidence            88764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.62  E-value=5.4e-15  Score=91.97  Aligned_cols=74  Identities=31%  Similarity=0.369  Sum_probs=65.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +++++|||+++|||+.+++.|+.+|+.|++.+|+.++.+.+.+.+.....+       .++.++++|+++.++ .++
T Consensus        33 ~~-~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~-------~~i~~~~lDLssl~SV~~f  104 (314)
T KOG1208|consen   33 LS-GKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKAN-------QKIRVIQLDLSSLKSVRKF  104 (314)
T ss_pred             CC-CcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCC-------CceEEEECCCCCHHHHHHH
Confidence            45 899999999999999999999999999999999999999999999874333       338999999999999 988


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      .+.
T Consensus       105 a~~  107 (314)
T KOG1208|consen  105 AEE  107 (314)
T ss_pred             HHH
Confidence            764

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.61  E-value=5.5e-15  Score=88.40  Aligned_cols=68  Identities=32%  Similarity=0.378  Sum_probs=62.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||.+++++|++.|++|++..|..++++.+..++..  ..         +..+..|++|+++ +++++.
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~---------~~~~~~DVtD~~~~~~~i~~   74 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GA---------ALALALDVTDRAAVEAAIEA   74 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--Cc---------eEEEeeccCCHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999998865  22         8899999999999 888763

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.61  E-value=6.8e-15  Score=92.07  Aligned_cols=73  Identities=27%  Similarity=0.343  Sum_probs=63.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +++++|||+++|||++++++|+++|++|++++|+++.++...+++...+..         +.++.+|++|+++ ++
T Consensus         4 ~l~-~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~---------~~~~~~Dv~d~~~v~~   73 (330)
T PRK06139          4 PLH-GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAE---------VLVVPTDVTDADQVKA   73 (330)
T ss_pred             CCC-CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEeeCCCHHHHHH
Confidence            456 899999999999999999999999999999999998888888777654443         7889999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        74 ~~~~   77 (330)
T PRK06139         74 LATQ   77 (330)
T ss_pred             HHHH
Confidence            8754

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.2e-14  Score=87.93  Aligned_cols=75  Identities=31%  Similarity=0.345  Sum_probs=63.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||+++|||++++++|+.+|++|++++|++++++...+++...++.       .++.++.+|++|+++ ++
T Consensus         5 ~l~-~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~   76 (265)
T PRK07062          5 QLE-GRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPG-------ARLLAARCDVLDEADVAA   76 (265)
T ss_pred             ccC-CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCC-------ceEEEEEecCCCHHHHHH
Confidence            356 899999999999999999999999999999999988888777777654322       128889999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        77 ~~~~   80 (265)
T PRK07062         77 FAAA   80 (265)
T ss_pred             HHHH
Confidence            7764

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.60  E-value=9.9e-15  Score=89.13  Aligned_cols=72  Identities=26%  Similarity=0.322  Sum_probs=61.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++++.+.++...+++...+..         +.++.+|++|+++ .++
T Consensus         4 ~~-~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~---------~~~~~~Dv~d~~~v~~~   73 (275)
T PRK05876          4 FP-GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFD---------VHGVMCDVRHREEVTHL   73 (275)
T ss_pred             cC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEeCCCCCHHHHHHH
Confidence            56 899999999999999999999999999999999988777777666543333         7889999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        74 ~~~   76 (275)
T PRK05876         74 ADE   76 (275)
T ss_pred             HHH
Confidence            764

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.3e-14  Score=87.24  Aligned_cols=74  Identities=30%  Similarity=0.381  Sum_probs=62.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |.|. +|+++|||++++||++++++|+.+|++|++++|+++..+...+++...+..         +.++.+|++++++ +
T Consensus         1 ~~l~-~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   70 (258)
T PRK07890          1 MLLK-GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRR---------ALAVPTDITDEDQCA   70 (258)
T ss_pred             CccC-CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCc---------eEEEecCCCCHHHHH
Confidence            4566 899999999999999999999999999999999987777776666543333         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        71 ~~~~~   75 (258)
T PRK07890         71 NLVAL   75 (258)
T ss_pred             HHHHH
Confidence            87754

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.59  E-value=3.8e-15  Score=87.38  Aligned_cols=70  Identities=30%  Similarity=0.321  Sum_probs=61.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |.+. |.+++||||++|||++++++|.+.|..||++.|+++.++....+..    .         +..+.||+.|.++ +
T Consensus         1 mk~t-gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p----~---------~~t~v~Dv~d~~~~~   66 (245)
T COG3967           1 MKTT-GNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP----E---------IHTEVCDVADRDSRR   66 (245)
T ss_pred             Cccc-CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc----c---------hheeeecccchhhHH
Confidence            6777 9999999999999999999999999999999999988877766442    2         7889999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        67 ~lvew   71 (245)
T COG3967          67 ELVEW   71 (245)
T ss_pred             HHHHH
Confidence            98765

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.59  E-value=1.3e-14  Score=87.30  Aligned_cols=74  Identities=28%  Similarity=0.370  Sum_probs=62.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++...+..         +.++.+|++|+++ +
T Consensus         5 ~~l~-~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~~~   74 (254)
T PRK08085          5 FSLA-GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIK---------AHAAPFNVTHKQEVE   74 (254)
T ss_pred             ccCC-CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCe---------EEEEecCCCCHHHHH
Confidence            4566 899999999999999999999999999999999988777777777544333         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        75 ~~~~~   79 (254)
T PRK08085         75 AAIEH   79 (254)
T ss_pred             HHHHH
Confidence            87754

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.59  E-value=1.6e-14  Score=86.99  Aligned_cols=73  Identities=30%  Similarity=0.312  Sum_probs=61.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||++++||++++++|+++|++|++++|++++.+...+.+...+..         +.++.+|++|+++ ++
T Consensus         7 ~~~-~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~---------~~~~~~D~~~~~~~~~   76 (255)
T PRK07523          7 DLT-GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLS---------AHALAFDVTDHDAVRA   76 (255)
T ss_pred             CCC-CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCce---------EEEEEccCCCHHHHHH
Confidence            356 899999999999999999999999999999999987777766666543333         8889999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus        77 ~~~~   80 (255)
T PRK07523         77 AIDA   80 (255)
T ss_pred             HHHH
Confidence            8764

>PRK08589 short chain dehydrogenase; Validated

Probab=99.59  E-value=1.7e-14  Score=87.75  Aligned_cols=71  Identities=28%  Similarity=0.414  Sum_probs=60.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+ +..+....++...+..         +.++.+|++++++ .++
T Consensus         4 l~-~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~   72 (272)
T PRK08589          4 LE-NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGK---------AKAYHVDISDEQQVKDF   72 (272)
T ss_pred             CC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCe---------EEEEEeecCCHHHHHHH
Confidence            55 8999999999999999999999999999999999 6666666666543333         8899999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        73 ~~~   75 (272)
T PRK08589         73 ASE   75 (272)
T ss_pred             HHH
Confidence            764

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.8e-14  Score=88.79  Aligned_cols=73  Identities=27%  Similarity=0.422  Sum_probs=62.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      .+. +++++|||+++|||++++++|+++|++|++++|+.+.++...+++...+..         +.++.+|++|+++ .+
T Consensus        37 ~~~-~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~---------~~~~~~Dl~d~~~v~~  106 (293)
T PRK05866         37 DLT-GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGD---------AMAVPCDLSDLDAVDA  106 (293)
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHHH
Confidence            456 899999999999999999999999999999999988877777776544333         7899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus       107 ~~~~  110 (293)
T PRK05866        107 LVAD  110 (293)
T ss_pred             HHHH
Confidence            8763

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.8e-14  Score=86.48  Aligned_cols=74  Identities=28%  Similarity=0.409  Sum_probs=62.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||.+++++|+++|++|++++|+.+..+.+.+++...+..         +.++++|+++.++ +
T Consensus         4 ~~l~-~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   73 (252)
T PRK07035          4 FDLT-GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGK---------AEALACHIGEMEQID   73 (252)
T ss_pred             cccC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEEcCCCCHHHHH
Confidence            4567 899999999999999999999999999999999987777777766544333         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        74 ~~~~~   78 (252)
T PRK07035         74 ALFAH   78 (252)
T ss_pred             HHHHH
Confidence            77654

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.58  E-value=2e-14  Score=89.13  Aligned_cols=72  Identities=28%  Similarity=0.382  Sum_probs=57.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc----------cchHHHHHHHHHHhhhccCCCCCCceEEEEec
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE----------EKGNEVAALVEKENAKFHSNLGFPSAMFIRCD   72 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~D   72 (85)
                      |. +|+++|||+++|||+++++.|+..|++|++++|+.          +.++...+++...+..         +.++++|
T Consensus         6 l~-~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~D   75 (305)
T PRK08303          6 LR-GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGR---------GIAVQVD   75 (305)
T ss_pred             CC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCc---------eEEEEcC
Confidence            55 89999999999999999999999999999999974          2344444555433222         7789999


Q ss_pred             CCCHHH-HHHhhh
Q 034737           73 VTNTKF-ALAFLR   84 (85)
Q Consensus        73 v~~~~~-~~~~~~   84 (85)
                      ++++++ ++++++
T Consensus        76 v~~~~~v~~~~~~   88 (305)
T PRK08303         76 HLVPEQVRALVER   88 (305)
T ss_pred             CCCHHHHHHHHHH
Confidence            999999 988764

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1.9e-14  Score=86.78  Aligned_cols=74  Identities=34%  Similarity=0.455  Sum_probs=62.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++...+..       .++.++.+|++++++ .++
T Consensus         5 l~-~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~   76 (260)
T PRK07063          5 LA-GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAG-------ARVLAVPADVTDAASVAAA   76 (260)
T ss_pred             cC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCC-------ceEEEEEccCCCHHHHHHH
Confidence            45 899999999999999999999999999999999988888877777642111       228899999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        77 ~~~   79 (260)
T PRK07063         77 VAA   79 (260)
T ss_pred             HHH
Confidence            764

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.58  E-value=2.1e-14  Score=87.93  Aligned_cols=71  Identities=24%  Similarity=0.440  Sum_probs=64.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      .. |++++|||+++|+|+.++.+|+++|+++++.|.+.+..++..++++..+ .         +..+.||++++++ .+.
T Consensus        36 v~-g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~---------~~~y~cdis~~eei~~~  104 (300)
T KOG1201|consen   36 VS-GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-E---------AKAYTCDISDREEIYRL  104 (300)
T ss_pred             cc-CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-c---------eeEEEecCCCHHHHHHH
Confidence            45 8999999999999999999999999999999999999999999888653 3         8999999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      .++
T Consensus       105 a~~  107 (300)
T KOG1201|consen  105 AKK  107 (300)
T ss_pred             HHH
Confidence            664

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.7e-14  Score=85.78  Aligned_cols=74  Identities=41%  Similarity=0.619  Sum_probs=62.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |.|. +|+++|||++++||.+++++|+++|++|++++|+.+..+...+++...+..         +.++.+|+++.++ .
T Consensus         3 ~~l~-~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~i~   72 (253)
T PRK06172          3 MTFS-GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGE---------ALFVACDVTRDAEVK   72 (253)
T ss_pred             cCCC-CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHHH
Confidence            3466 899999999999999999999999999999999988777777666544333         8899999999998 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        73 ~~~~~   77 (253)
T PRK06172         73 ALVEQ   77 (253)
T ss_pred             HHHHH
Confidence            87653

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.7e-14  Score=89.42  Aligned_cols=72  Identities=26%  Similarity=0.357  Sum_probs=62.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +++++|||+++|||++++++|+++|++|++++|+++.++...+++...+..         +.++.+|++|+++ +++
T Consensus         6 l~-~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~---------~~~v~~Dv~d~~~v~~~   75 (334)
T PRK07109          6 IG-RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGE---------ALAVVADVADAEAVQAA   75 (334)
T ss_pred             CC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCc---------EEEEEecCCCHHHHHHH
Confidence            45 789999999999999999999999999999999988888877777655444         8899999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        76 ~~~   78 (334)
T PRK07109         76 ADR   78 (334)
T ss_pred             HHH
Confidence            653

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.57  E-value=3.1e-14  Score=86.35  Aligned_cols=74  Identities=27%  Similarity=0.408  Sum_probs=62.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||.+++++|+.+|++|++++|+.+..+.....+...+..         +.++.+|++++++ .
T Consensus         5 ~~~~-~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~i~   74 (264)
T PRK07576          5 FDFA-GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPE---------GLGVSADVRDYAAVE   74 (264)
T ss_pred             ccCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCc---------eEEEECCCCCHHHHH
Confidence            4567 899999999999999999999999999999999987776666666544333         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        75 ~~~~~   79 (264)
T PRK07576         75 AAFAQ   79 (264)
T ss_pred             HHHHH
Confidence            87754

>PRK06720 hypothetical protein; Provisional

Probab=99.57  E-value=4.2e-14  Score=81.37  Aligned_cols=74  Identities=32%  Similarity=0.477  Sum_probs=61.2

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |.+. +++++|||+++|||.++++.|++.|++|++++++.+..+...+++...+..         +.++.+|++++++ +
T Consensus        12 ~~l~-gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~v~   81 (169)
T PRK06720         12 MKLA-GKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGE---------ALFVSYDMEKQGDWQ   81 (169)
T ss_pred             cccC-CCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHH
Confidence            3466 899999999999999999999999999999999887776666666533333         7789999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        82 ~~v~~   86 (169)
T PRK06720         82 RVISI   86 (169)
T ss_pred             HHHHH
Confidence            87653

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.57  E-value=3.5e-14  Score=87.11  Aligned_cols=72  Identities=29%  Similarity=0.317  Sum_probs=59.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc---------cchHHHHHHHHHHhhhccCCCCCCceEEEEecC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE---------EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDV   73 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv   73 (85)
                      +. +|+++|||+++|||++++++|++.|++|++++++.         +.++...+++...+..         +.++.+|+
T Consensus         4 l~-~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~Dv   73 (286)
T PRK07791          4 LD-GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGE---------AVANGDDI   73 (286)
T ss_pred             cC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCc---------eEEEeCCC
Confidence            45 89999999999999999999999999999998765         5556666666543333         78899999


Q ss_pred             CCHHH-HHHhhh
Q 034737           74 TNTKF-ALAFLR   84 (85)
Q Consensus        74 ~~~~~-~~~~~~   84 (85)
                      +|+++ .+++++
T Consensus        74 ~~~~~v~~~~~~   85 (286)
T PRK07791         74 ADWDGAANLVDA   85 (286)
T ss_pred             CCHHHHHHHHHH
Confidence            99999 888764

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.57  E-value=3.4e-14  Score=87.69  Aligned_cols=75  Identities=27%  Similarity=0.305  Sum_probs=61.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+.+......       ..+.++.+|++|.++ ++
T Consensus        13 ~~~-~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~-------~~~~~~~~Dl~d~~~v~~   84 (306)
T PRK06197         13 DQS-GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPG-------ADVTLQELDLTSLASVRA   84 (306)
T ss_pred             cCC-CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCC-------CceEEEECCCCCHHHHHH
Confidence            355 899999999999999999999999999999999987777666666543211       228899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        85 ~~~~   88 (306)
T PRK06197         85 AADA   88 (306)
T ss_pred             HHHH
Confidence            8764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.56  E-value=4.2e-14  Score=85.30  Aligned_cols=72  Identities=31%  Similarity=0.482  Sum_probs=59.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||.+++++|++.|++|++++++ +..+.+.+.+...+..         +.++.+|+++.++ .+
T Consensus        12 ~l~-~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~i~~   80 (258)
T PRK06935         12 SLD-GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRK---------VTFVQVDLTKPESAEK   80 (258)
T ss_pred             cCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHHHH
Confidence            456 8999999999999999999999999999999988 5555665555443333         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        81 ~~~~   84 (258)
T PRK06935         81 VVKE   84 (258)
T ss_pred             HHHH
Confidence            8764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.56  E-value=3.6e-14  Score=85.91  Aligned_cols=74  Identities=28%  Similarity=0.326  Sum_probs=62.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||++++||++++++|+.+|++|++++++++..+.....+...+..         +.++++|++++++ +
T Consensus         6 ~~~~-~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~   75 (265)
T PRK07097          6 FSLK-GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIE---------AHGYVCDVTDEDGVQ   75 (265)
T ss_pred             cCCC-CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHHH
Confidence            3456 899999999999999999999999999999999988777776666544333         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        76 ~~~~~   80 (265)
T PRK07097         76 AMVSQ   80 (265)
T ss_pred             HHHHH
Confidence            88764

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.4e-14  Score=85.60  Aligned_cols=72  Identities=35%  Similarity=0.446  Sum_probs=60.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +++++|||+++|||++++++|+++|++|++++|+++.. +..+++...+..         +.++.+|++++++ .+
T Consensus         4 ~l~-~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~   72 (258)
T PRK08628          4 NLK-DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPR---------AEFVQVDLTDDAQCRD   72 (258)
T ss_pred             CcC-CCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCc---------eEEEEccCCCHHHHHH
Confidence            667 99999999999999999999999999999999988665 555555544433         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        73 ~~~~   76 (258)
T PRK08628         73 AVEQ   76 (258)
T ss_pred             HHHH
Confidence            7764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.56  E-value=4.2e-14  Score=85.08  Aligned_cols=73  Identities=32%  Similarity=0.407  Sum_probs=62.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||++++||++++++|+++|++|++++|+++.++....++...+..         +.++.+|++++++ .+
T Consensus         8 ~~~-~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~   77 (256)
T PRK06124          8 SLA-GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGA---------AEALAFDIADEEAVAA   77 (256)
T ss_pred             CCC-CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEccCCCHHHHHH
Confidence            466 899999999999999999999999999999999987777777766554433         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        78 ~~~~   81 (256)
T PRK06124         78 AFAR   81 (256)
T ss_pred             HHHH
Confidence            7764

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.5e-14  Score=85.07  Aligned_cols=73  Identities=34%  Similarity=0.376  Sum_probs=61.2

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||++++||.+++++|+++|++|++++|+.+..+...+.+. .+.         ++.++++|++|+++ +
T Consensus         1 m~~~-~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~---------~~~~~~~D~~~~~~~~   69 (252)
T PRK06138          1 MRLA-GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGG---------RAFARQGDVGSAEAVE   69 (252)
T ss_pred             CCCC-CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCC---------eEEEEEcCCCCHHHHH
Confidence            7788 9999999999999999999999999999999999876666555553 122         28899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        70 ~~~~~   74 (252)
T PRK06138         70 ALVDF   74 (252)
T ss_pred             HHHHH
Confidence            87753

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.56  E-value=4.4e-14  Score=85.54  Aligned_cols=72  Identities=28%  Similarity=0.349  Sum_probs=61.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +++++|||+++|||.+++++|+.+|++|++++|+.++.+.+.+.+...+..         +.++.+|++++++ .++
T Consensus         8 ~~-~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~~~   77 (263)
T PRK07814          8 LD-DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRR---------AHVVAADLAHPEATAGL   77 (263)
T ss_pred             CC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHHHH
Confidence            55 899999999999999999999999999999999987777776666543333         8899999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        78 ~~~   80 (263)
T PRK07814         78 AGQ   80 (263)
T ss_pred             HHH
Confidence            664

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.56  E-value=5.9e-14  Score=85.52  Aligned_cols=74  Identities=28%  Similarity=0.405  Sum_probs=58.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-------hHHHHHHHHHHhhhccCCCCCCceEEEEecC
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-------GNEVAALVEKENAKFHSNLGFPSAMFIRCDV   73 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv   73 (85)
                      |++. +|+++|||+++|||.+++++|+++|++|++++|+.+.       ++...+++...+..         +.++.+|+
T Consensus         2 ~~~~-~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~---------~~~~~~D~   71 (273)
T PRK08278          2 MSLS-GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ---------ALPLVGDV   71 (273)
T ss_pred             CCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCc---------eEEEEecC
Confidence            4567 8999999999999999999999999999999987643       33334444433223         88999999


Q ss_pred             CCHHH-HHHhhh
Q 034737           74 TNTKF-ALAFLR   84 (85)
Q Consensus        74 ~~~~~-~~~~~~   84 (85)
                      +++++ .+++++
T Consensus        72 ~~~~~i~~~~~~   83 (273)
T PRK08278         72 RDEDQVAAAVAK   83 (273)
T ss_pred             CCHHHHHHHHHH
Confidence            99999 887763

>PRK06194 hypothetical protein; Provisional

Probab=99.56  E-value=4.5e-14  Score=86.24  Aligned_cols=72  Identities=24%  Similarity=0.306  Sum_probs=60.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +++++|||+++|||++++++|+++|++|++++|+.+.++....++...+..         +.++.+|++|+++ +++
T Consensus         4 ~~-~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~d~~~~~~~   73 (287)
T PRK06194          4 FA-GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAE---------VLGVRTDVSDAAQVEAL   73 (287)
T ss_pred             CC-CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHHHHH
Confidence            55 789999999999999999999999999999999887777776666543333         8889999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      ++.
T Consensus        74 ~~~   76 (287)
T PRK06194         74 ADA   76 (287)
T ss_pred             HHH
Confidence            653

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.55  E-value=6.3e-14  Score=84.45  Aligned_cols=74  Identities=36%  Similarity=0.504  Sum_probs=60.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++|+.+ ..+...+.+...+..         +.++.+|++|+++ 
T Consensus         4 ~~~~-~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~i   73 (254)
T PRK06114          4 FDLD-GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRR---------AIQIAADVTSKADL   73 (254)
T ss_pred             cCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHH
Confidence            4567 899999999999999999999999999999998764 355565666544333         7889999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        74 ~~~~~~   79 (254)
T PRK06114         74 RAAVAR   79 (254)
T ss_pred             HHHHHH
Confidence            887764

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.55  E-value=4.4e-14  Score=85.42  Aligned_cols=73  Identities=30%  Similarity=0.399  Sum_probs=61.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +++++|||++++||.+++++|+++|++|++++|+++..+....++ .....         +.++.+|++|+++ .
T Consensus         1 m~~~-~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~---------~~~~~~D~~d~~~~~   69 (263)
T PRK09072          1 MDLK-DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGR---------HRWVVADLTSEAGRE   69 (263)
T ss_pred             CCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCc---------eEEEEccCCCHHHHH
Confidence            6788 899999999999999999999999999999999987777666655 22222         8899999999998 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        70 ~~~~~   74 (263)
T PRK09072         70 AVLAR   74 (263)
T ss_pred             HHHHH
Confidence            87653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=4.8e-14  Score=84.37  Aligned_cols=73  Identities=34%  Similarity=0.464  Sum_probs=61.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +++++|||++++||.+++++|+++|++|++++|+++..+.+...+.. +..         +.++.+|++|+++ .
T Consensus         1 ~~~~-~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~---------~~~~~~D~~~~~~~~   69 (251)
T PRK07231          1 MRLE-GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGR---------AIAVAADVSDEADVE   69 (251)
T ss_pred             CCcC-CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCe---------EEEEECCCCCHHHHH
Confidence            6778 89999999999999999999999999999999998777666665543 222         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        70 ~~~~~   74 (251)
T PRK07231         70 AAVAA   74 (251)
T ss_pred             HHHHH
Confidence            87753

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.55  E-value=4.7e-14  Score=85.06  Aligned_cols=73  Identities=30%  Similarity=0.383  Sum_probs=61.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||++++||.+++++|+++|++|++++|+.++.+...+.+...+..         +.++.+|++|+++ ++
T Consensus         9 ~~~-~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~---------~~~~~~Dl~d~~~i~~   78 (259)
T PRK08213          9 DLS-GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGID---------ALWIAADVADEADIER   78 (259)
T ss_pred             CcC-CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEEccCCCHHHHHH
Confidence            456 899999999999999999999999999999999987777766666543333         7889999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        79 ~~~~   82 (259)
T PRK08213         79 LAEE   82 (259)
T ss_pred             HHHH
Confidence            7754

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.55  E-value=4e-14  Score=85.98  Aligned_cols=70  Identities=36%  Similarity=0.336  Sum_probs=59.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +++++|||+++|||++++++|+.+|++|++++|+++.++...+.+.    .         +.++.+|++|+++ .
T Consensus         1 ~~~~-~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~---------~~~~~~D~~~~~~~~   66 (273)
T PRK07825          1 DDLR-GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----L---------VVGGPLDVTDPASFA   66 (273)
T ss_pred             CCCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----c---------ceEEEccCCCHHHHH
Confidence            6788 8999999999999999999999999999999999877666555442    2         6789999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        67 ~~~~~   71 (273)
T PRK07825         67 AFLDA   71 (273)
T ss_pred             HHHHH
Confidence            87764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.55  E-value=5e-14  Score=85.77  Aligned_cols=73  Identities=30%  Similarity=0.441  Sum_probs=61.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++...+..         +.++++|++++++ .+
T Consensus         7 ~~~-~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~v~~   76 (278)
T PRK08277          7 SLK-GKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGE---------ALAVKADVLDKESLEQ   76 (278)
T ss_pred             ccC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHHHH
Confidence            456 899999999999999999999999999999999987777777766543333         8899999999998 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        77 ~~~~   80 (278)
T PRK08277         77 ARQQ   80 (278)
T ss_pred             HHHH
Confidence            7653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.55  E-value=4.4e-14  Score=87.77  Aligned_cols=72  Identities=21%  Similarity=0.146  Sum_probs=60.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||.++++.|+.+|++|++++|+.++.+...+++.....         ++.++.+|+++.++ +++
T Consensus         4 ~~-~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---------~~~~~~~Dl~~~~~v~~~   73 (322)
T PRK07453          4 DA-KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPD---------SYTIIHIDLGDLDSVRRF   73 (322)
T ss_pred             CC-CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCC---------ceEEEEecCCCHHHHHHH
Confidence            45 89999999999999999999999999999999998877776666642222         28899999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        74 ~~~   76 (322)
T PRK07453         74 VDD   76 (322)
T ss_pred             HHH
Confidence            764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.55  E-value=5.5e-14  Score=84.71  Aligned_cols=72  Identities=29%  Similarity=0.413  Sum_probs=56.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+..  +.....+...+..         +.++.+|++++++ +
T Consensus         4 ~~l~-~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~   71 (251)
T PRK12481          4 FDLN-GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRK---------FHFITADLIQQKDID   71 (251)
T ss_pred             cccC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCe---------EEEEEeCCCCHHHHH
Confidence            4566 899999999999999999999999999999887642  3333334332222         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        72 ~~~~~   76 (251)
T PRK12481         72 SIVSQ   76 (251)
T ss_pred             HHHHH
Confidence            88764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.55  E-value=3.4e-14  Score=85.90  Aligned_cols=71  Identities=35%  Similarity=0.404  Sum_probs=58.2

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|+ +|+++|||+++|||++++++|+++|++|++++|+.+.++.+....   +..         +.++.+|+++.++ .
T Consensus         1 m~~~-~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~---~~~---------~~~~~~D~~~~~~~~   67 (262)
T TIGR03325         1 MRLK-GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH---GDA---------VVGVEGDVRSLDDHK   67 (262)
T ss_pred             CCcC-CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc---CCc---------eEEEEeccCCHHHHH
Confidence            7788 999999999999999999999999999999999876555443211   122         7889999999998 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        68 ~~~~~   72 (262)
T TIGR03325        68 EAVAR   72 (262)
T ss_pred             HHHHH
Confidence            87754

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.55  E-value=9.2e-14  Score=85.04  Aligned_cols=76  Identities=34%  Similarity=0.370  Sum_probs=64.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|++.|++|++++|+++..+.....+...+.      .+.++..+.||+++.++ ++
T Consensus         5 ~l~-gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~~~~   77 (270)
T KOG0725|consen    5 RLA-GKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGY------TGGKVLAIVCDVSKEVDVEK   77 (270)
T ss_pred             cCC-CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC------CCCeeEEEECcCCCHHHHHH
Confidence            467 99999999999999999999999999999999999988888877765432      13458999999999988 87


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus        78 l~~~   81 (270)
T KOG0725|consen   78 LVEF   81 (270)
T ss_pred             HHHH
Confidence            7653

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.54  E-value=7.5e-14  Score=84.50  Aligned_cols=69  Identities=39%  Similarity=0.536  Sum_probs=58.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      ++ +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++   +..         +.++.+|++++++ .++
T Consensus         4 ~~-~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dl~~~~~~~~~   70 (261)
T PRK08265          4 LA-GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GER---------ARFIATDITDDAAIERA   70 (261)
T ss_pred             CC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCe---------eEEEEecCCCHHHHHHH
Confidence            66 899999999999999999999999999999999987666655444   222         7889999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      ++.
T Consensus        71 ~~~   73 (261)
T PRK08265         71 VAT   73 (261)
T ss_pred             HHH
Confidence            764

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.54  E-value=9.4e-14  Score=83.09  Aligned_cols=74  Identities=32%  Similarity=0.431  Sum_probs=63.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +++++|||++++||..++++|+++|++|++++|+.++.+....++...+..         +.++.+|++++++ +
T Consensus         1 ~~~~-~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   70 (253)
T PRK08217          1 MDLK-DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTE---------VRGYAANVTDEEDVE   70 (253)
T ss_pred             CCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHHH
Confidence            6778 999999999999999999999999999999999987777766666544333         8889999999998 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        71 ~~~~~   75 (253)
T PRK08217         71 ATFAQ   75 (253)
T ss_pred             HHHHH
Confidence            77654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.54  E-value=1e-13  Score=82.52  Aligned_cols=74  Identities=34%  Similarity=0.478  Sum_probs=62.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +++++|||++++||..++++|+++|+.|++++|++...+.....+...+..         +.++.+|++++++ .
T Consensus         1 ~~~~-~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   70 (246)
T PRK05653          1 MSLQ-GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGE---------ARVLVFDVSDEAAVR   70 (246)
T ss_pred             CCCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCc---------eEEEEccCCCHHHHH
Confidence            6777 899999999999999999999999999999999987777666666544433         8899999999998 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        71 ~~~~~   75 (246)
T PRK05653         71 ALIEA   75 (246)
T ss_pred             HHHHH
Confidence            77653

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1e-13  Score=83.07  Aligned_cols=73  Identities=30%  Similarity=0.398  Sum_probs=60.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +++ +|+++|||++++||.+++++|+++|++|++++|+++..+...+++......         +.++.+|+++.++ ++
T Consensus         3 ~~~-~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~   72 (250)
T PRK07774          3 RFD-DKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGT---------AIAVQVDVSDPDSAKA   72 (250)
T ss_pred             ccC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHHH
Confidence            466 899999999999999999999999999999999977666666655433323         7889999999998 87


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        73 ~~~~   76 (250)
T PRK07774         73 MADA   76 (250)
T ss_pred             HHHH
Confidence            7653

>PRK08643 acetoin reductase; Validated

Probab=99.54  E-value=8.8e-14  Score=83.71  Aligned_cols=70  Identities=31%  Similarity=0.447  Sum_probs=60.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||.+++++|+++|++|++++|+.+..+....++...+..         +.++++|++++++ ++++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~~~~   72 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGK---------AIAVKADVSDRDQVFAAVRQ   72 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHHHHHHHH
Confidence            689999999999999999999999999999999988777777766543333         7889999999999 887764

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.53  E-value=1.1e-13  Score=82.71  Aligned_cols=75  Identities=31%  Similarity=0.364  Sum_probs=61.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |.+..+|+++|||++++||+.++++|+++|++|++++|+++..+.+.+.+...+..         +.++.+|++++++ .
T Consensus         1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   71 (241)
T PRK07454          1 MSLNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVK---------AAAYSIDLSNPEAIA   71 (241)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCc---------EEEEEccCCCHHHHH
Confidence            45554789999999999999999999999999999999987766666665543333         8899999999998 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        72 ~~~~~   76 (241)
T PRK07454         72 PGIAE   76 (241)
T ss_pred             HHHHH
Confidence            77653

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.53  E-value=1e-13  Score=83.37  Aligned_cols=70  Identities=24%  Similarity=0.351  Sum_probs=59.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..+...+.+...+..         +.++++|++|+++ ++++++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~~   71 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQ---------VLTVQMDVRNPEDVQKMVEQ   71 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEecCCCHHHHHHHHHH
Confidence            579999999999999999999999999999999987777766666543333         8899999999999 887764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.53  E-value=1.2e-13  Score=83.17  Aligned_cols=74  Identities=27%  Similarity=0.479  Sum_probs=61.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||.+++++|+.+|++|++++|+.+..+....++...+..         +.++.+|+++.++ .
T Consensus         7 ~~l~-~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~i~   76 (255)
T PRK06113          7 LRLD-GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---------AFACRCDITSEQELS   76 (255)
T ss_pred             cCcC-CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHH
Confidence            3466 899999999999999999999999999999999887777776666543333         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++..
T Consensus        77 ~~~~~   81 (255)
T PRK06113         77 ALADF   81 (255)
T ss_pred             HHHHH
Confidence            87653

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.53  E-value=1.2e-13  Score=82.97  Aligned_cols=72  Identities=39%  Similarity=0.507  Sum_probs=61.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +++++|||++++||.+++++|+.+|++|++++|+++..+....++...+..         +.++.+|++++++ .++
T Consensus         2 ~~-~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~   71 (258)
T PRK12429          2 LK-GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGK---------AIGVAMDVTDEEAINAG   71 (258)
T ss_pred             CC-CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHHHH
Confidence            45 889999999999999999999999999999999988777777666544333         8899999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        72 ~~~   74 (258)
T PRK12429         72 IDY   74 (258)
T ss_pred             HHH
Confidence            763

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.53  E-value=8.2e-14  Score=79.08  Aligned_cols=69  Identities=33%  Similarity=0.515  Sum_probs=57.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC--ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS--EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      |+++|||+++|||++++++|+++|. .|+++.|+  .+..+.+...+...+..         +.++++|++++++ ++++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~---------~~~~~~D~~~~~~~~~~~   71 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAK---------ITFIECDLSDPESIRALI   71 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSE---------EEEEESETTSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccc---------cccccccccccccccccc
Confidence            6899999999999999999999965 67778888  56677777777655444         9999999999999 9988


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      ++
T Consensus        72 ~~   73 (167)
T PF00106_consen   72 EE   73 (167)
T ss_dssp             HH
T ss_pred             cc
Confidence            75

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.53  E-value=1.2e-13  Score=83.55  Aligned_cols=74  Identities=24%  Similarity=0.377  Sum_probs=58.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|. +|+++|||+++|||++++++|++.|++|+++++ +.+.++....++.....        .++.++.+|++|+++ +
T Consensus         5 ~l~-~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~   75 (260)
T PRK08416          5 EMK-GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG--------IKAKAYPLNILEPETYK   75 (260)
T ss_pred             ccC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcC--------CceEEEEcCCCCHHHHH
Confidence            356 899999999999999999999999999988865 45555555555543221        128899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        76 ~~~~~   80 (260)
T PRK08416         76 ELFKK   80 (260)
T ss_pred             HHHHH
Confidence            88764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.53  E-value=1.3e-13  Score=83.38  Aligned_cols=73  Identities=22%  Similarity=0.280  Sum_probs=55.7

Q ss_pred             CCCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            1 MELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      |++. +|+++|||++  +|||++++++|+++|++|++++|+.+..+ ..+++......         ..++++|++|+++
T Consensus         6 ~~~~-~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~---------~~~~~~D~~~~~~   74 (258)
T PRK07533          6 LPLA-GKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDA---------PIFLPLDVREPGQ   74 (258)
T ss_pred             cccC-CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhcc---------ceEEecCcCCHHH
Confidence            4567 9999999998  59999999999999999999999864322 22233222222         5678999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       ++++++
T Consensus        75 v~~~~~~   81 (258)
T PRK07533         75 LEAVFAR   81 (258)
T ss_pred             HHHHHHH
Confidence             988764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.52  E-value=1.4e-13  Score=82.43  Aligned_cols=72  Identities=24%  Similarity=0.344  Sum_probs=57.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||.+++++|+++|++|++++|+.  .....+.+...+..         +.++++|++++++ .
T Consensus         1 ~~~~-~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   68 (248)
T TIGR01832         1 FSLE-GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRR---------FLSLTADLSDIEAIK   68 (248)
T ss_pred             CCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCc---------eEEEECCCCCHHHHH
Confidence            5677 99999999999999999999999999999999875  23333344332222         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        69 ~~~~~   73 (248)
T TIGR01832        69 ALVDS   73 (248)
T ss_pred             HHHHH
Confidence            87764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.9e-13  Score=82.45  Aligned_cols=75  Identities=20%  Similarity=0.285  Sum_probs=62.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||+++++.|+++|++|++++|+++..+...+++......        ++.++.+|++++++ .
T Consensus         3 ~~~~-~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--------~~~~~~~D~~~~~~~~   73 (259)
T PRK06125          3 LHLA-GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGV--------DVAVHALDLSSPEARE   73 (259)
T ss_pred             cCCC-CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCC--------ceEEEEecCCCHHHHH
Confidence            4467 899999999999999999999999999999999988777777666543221        27889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        74 ~~~~~   78 (259)
T PRK06125         74 QLAAE   78 (259)
T ss_pred             HHHHH
Confidence            87653

>PRK09242 tropinone reductase; Provisional

Probab=99.52  E-value=1.4e-13  Score=82.97  Aligned_cols=75  Identities=21%  Similarity=0.275  Sum_probs=62.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++....+.       .++.++.+|++++++ ++
T Consensus         6 ~~~-~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~-------~~~~~~~~Dl~~~~~~~~   77 (257)
T PRK09242          6 RLD-GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPE-------REVHGLAADVSDDEDRRA   77 (257)
T ss_pred             ccC-CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCC-------CeEEEEECCCCCHHHHHH
Confidence            456 899999999999999999999999999999999987777777666544211       228899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        78 ~~~~   81 (257)
T PRK09242         78 ILDW   81 (257)
T ss_pred             HHHH
Confidence            7764

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.52  E-value=8e-14  Score=84.28  Aligned_cols=70  Identities=33%  Similarity=0.386  Sum_probs=58.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      .|. +|+++|||+++|||++++++|+++|++|++++|+++.++.+..++   ...         +.++++|++++++ ++
T Consensus         3 ~~~-~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~~   69 (263)
T PRK06200          3 WLH-GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDH---------VLVVEGDVTSYADNQR   69 (263)
T ss_pred             CCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc---------ceEEEccCCCHHHHHH
Confidence            456 899999999999999999999999999999999987666554433   112         7889999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        70 ~~~~   73 (263)
T PRK06200         70 AVDQ   73 (263)
T ss_pred             HHHH
Confidence            7764

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.52  E-value=1.4e-13  Score=82.86  Aligned_cols=72  Identities=39%  Similarity=0.552  Sum_probs=61.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      ++ +|+++|||++++||.++++.|+++|++|++++|+++..+...+.+...+..         +.++++|+++.++ .++
T Consensus         5 ~~-~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~   74 (262)
T PRK13394          5 LN-GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGK---------AIGVAMDVTNEDAVNAG   74 (262)
T ss_pred             CC-CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCce---------EEEEECCCCCHHHHHHH
Confidence            45 899999999999999999999999999999999988777777777544333         7889999999999 877


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      ++.
T Consensus        75 ~~~   77 (262)
T PRK13394         75 IDK   77 (262)
T ss_pred             HHH
Confidence            653

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.52  E-value=1.4e-13  Score=83.75  Aligned_cols=71  Identities=21%  Similarity=0.272  Sum_probs=56.0

Q ss_pred             CCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |. +|+++|||+++  |||++++++|+++|++|++++|+. ..+...+++......         ..++.+|++|+++ +
T Consensus         4 l~-~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~v~   72 (262)
T PRK07984          4 LS-GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS---------DIVLPCDVAEDASID   72 (262)
T ss_pred             cC-CCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCC---------ceEeecCCCCHHHHH
Confidence            44 89999999985  999999999999999999998873 344444555433222         6788999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        73 ~~~~~   77 (262)
T PRK07984         73 AMFAE   77 (262)
T ss_pred             HHHHH
Confidence            88764

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.52  E-value=1.1e-13  Score=83.51  Aligned_cols=70  Identities=20%  Similarity=0.285  Sum_probs=55.0

Q ss_pred             CCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            2 ELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         2 ~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      .|. +|+++|||++  +|||++++++|+++|++|++++|+. +.....+++.  ..         .+.++++|++|+++ 
T Consensus         4 ~l~-~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~---------~~~~~~~Dl~~~~~v   70 (252)
T PRK06079          4 ILS-GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DE---------EDLLVECDVASDESI   70 (252)
T ss_pred             ccC-CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cC---------ceeEEeCCCCCHHHH
Confidence            356 8999999999  7999999999999999999999873 3333333322  11         27889999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        71 ~~~~~~   76 (252)
T PRK06079         71 ERAFAT   76 (252)
T ss_pred             HHHHHH
Confidence            988764

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.52  E-value=1.3e-13  Score=84.81  Aligned_cols=65  Identities=32%  Similarity=0.399  Sum_probs=60.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      |++++|||++.|||++.+++|+++|.+|+++.|++++++.+.+++.+.++. +       +.++..|+++.+.
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~v-e-------v~~i~~Dft~~~~  113 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKV-E-------VRIIAIDFTKGDE  113 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCc-E-------EEEEEEecCCCch
Confidence            679999999999999999999999999999999999999999999998873 4       8999999997664

>PRK09186 flagellin modification protein A; Provisional

Probab=99.52  E-value=2e-13  Score=82.06  Aligned_cols=74  Identities=27%  Similarity=0.339  Sum_probs=60.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||+++++.|+++|++|++++|+++..+...+.+......       ..+.++.+|++|+++ .++
T Consensus         2 ~~-~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-------~~~~~~~~Dl~d~~~~~~~   73 (256)
T PRK09186          2 LK-GKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKS-------KKLSLVELDITDQESLEEF   73 (256)
T ss_pred             CC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCC-------CceeEEEecCCCHHHHHHH
Confidence            45 899999999999999999999999999999999988777777666433211       126678999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      ++.
T Consensus        74 ~~~   76 (256)
T PRK09186         74 LSK   76 (256)
T ss_pred             HHH
Confidence            764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.51  E-value=1.7e-13  Score=84.89  Aligned_cols=73  Identities=32%  Similarity=0.409  Sum_probs=60.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|+ +|+++|||+++|||++++++|+++|++|++++++. ...+...+++...+..         +.++.+|++|+++ +
T Consensus         9 ~l~-~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~---------~~~~~~Dv~d~~~~~   78 (306)
T PRK07792          9 DLS-GKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAK---------AVAVAGDISQRATAD   78 (306)
T ss_pred             CCC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCe---------EEEEeCCCCCHHHHH
Confidence            466 89999999999999999999999999999998754 4455666666544333         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        79 ~~~~~   83 (306)
T PRK07792         79 ELVAT   83 (306)
T ss_pred             HHHHH
Confidence            88764

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.3e-13  Score=84.93  Aligned_cols=71  Identities=31%  Similarity=0.380  Sum_probs=59.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +++++|||+++|||+++++.|+++|++|++++|+.+.++.+.+++.. ..         .+..+.+|++|+++ +++
T Consensus         7 l~-gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~---------~~~~~~~Dv~d~~~v~~~   75 (296)
T PRK05872          7 LA-GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DD---------RVLTVVADVTDLAAMQAA   75 (296)
T ss_pred             CC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CC---------cEEEEEecCCCHHHHHHH
Confidence            45 89999999999999999999999999999999998877776665532 11         26778899999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        76 ~~~   78 (296)
T PRK05872         76 AEE   78 (296)
T ss_pred             HHH
Confidence            764

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.51  E-value=2.1e-13  Score=82.26  Aligned_cols=71  Identities=34%  Similarity=0.410  Sum_probs=56.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|++. .....+++...+..         +.++.+|++++++ .++
T Consensus         6 ~~-~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~   74 (260)
T PRK12823          6 FA-GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGE---------ALALTADLETYAGAQAA   74 (260)
T ss_pred             cC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCe---------EEEEEEeCCCHHHHHHH
Confidence            55 899999999999999999999999999999999853 33444444333323         7889999999998 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        75 ~~~   77 (260)
T PRK12823         75 MAA   77 (260)
T ss_pred             HHH
Confidence            764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.51  E-value=2.1e-13  Score=83.39  Aligned_cols=73  Identities=18%  Similarity=0.180  Sum_probs=55.6

Q ss_pred             CCCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            1 MELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      |.|. +|+++|||++  +|||++++++|+++|++|++++|+.. .....+.+......         -.++++|++|+++
T Consensus         1 ~~l~-~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~---------~~~~~~Dv~d~~~   69 (274)
T PRK08415          1 MIMK-GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS---------DYVYELDVSKPEH   69 (274)
T ss_pred             CccC-CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC---------ceEEEecCCCHHH
Confidence            6788 9999999997  79999999999999999999999853 22222233222111         1568999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       ++++++
T Consensus        70 v~~~~~~   76 (274)
T PRK08415         70 FKSLAES   76 (274)
T ss_pred             HHHHHHH
Confidence             988765

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.50  E-value=2.4e-13  Score=82.18  Aligned_cols=71  Identities=20%  Similarity=0.222  Sum_probs=59.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccc-hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEK-GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      +++++|||+++|||++++++|+++| ++|++++|+++. ++.+.+++...+..        ++.++.+|++|+++ ++++
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~--------~v~~~~~D~~~~~~~~~~~   79 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGAS--------SVEVIDFDALDTDSHPKVI   79 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCC--------ceEEEEecCCChHHHHHHH
Confidence            7899999999999999999999985 899999999875 77777777654321        28899999999998 8776


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      ++
T Consensus        80 ~~   81 (253)
T PRK07904         80 DA   81 (253)
T ss_pred             HH
Confidence            53

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.50  E-value=2.6e-13  Score=81.27  Aligned_cols=72  Identities=18%  Similarity=0.228  Sum_probs=60.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||+++|||++++++|+++|++|++++|+++..+.....+....+.       .++.++.+|++++++ .+++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~   74 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPG-------IKVAVAALDVNDHDQVFEVFAE   74 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCC-------ceEEEEEcCCCCHHHHHHHHHH
Confidence            689999999999999999999999999999999988777776666544222       238899999999998 887764

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.50  E-value=2.8e-13  Score=80.80  Aligned_cols=72  Identities=36%  Similarity=0.487  Sum_probs=60.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +++++|||++++||.+++++|+.+|++|++++|+.+..+....++...+..         +.++.+|++++++ .++
T Consensus         5 ~~-~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~   74 (239)
T PRK07666          5 LQ-GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVK---------VVIATADVSDYEEVTAA   74 (239)
T ss_pred             CC-CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCe---------EEEEECCCCCHHHHHHH
Confidence            55 789999999999999999999999999999999987776666666433323         8899999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        75 ~~~   77 (239)
T PRK07666         75 IEQ   77 (239)
T ss_pred             HHH
Confidence            753

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.50  E-value=1.7e-13  Score=82.61  Aligned_cols=71  Identities=28%  Similarity=0.378  Sum_probs=59.2

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |.+. +++++|||++++||.++++.|+++|++|++++|+.+..+.....+.   ..         +.++.+|++|+++ +
T Consensus         2 ~~l~-~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~---------~~~~~~D~~~~~~~~   68 (257)
T PRK07067          2 MRLQ-GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG---PA---------AIAVSLDVTRQDSID   68 (257)
T ss_pred             CCCC-CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC---Cc---------eEEEEccCCCHHHHH
Confidence            4567 8999999999999999999999999999999999876666544431   22         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        69 ~~~~~   73 (257)
T PRK07067         69 RIVAA   73 (257)
T ss_pred             HHHHH
Confidence            87764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.50  E-value=2.4e-13  Score=82.35  Aligned_cols=71  Identities=24%  Similarity=0.355  Sum_probs=54.6

Q ss_pred             CCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCcc---chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            2 ELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEE---KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         2 ~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      ++. +|+++|||++  +|||++++++|+++|++|++++|+..   .++++.+++.  +.         ++.++++|++|+
T Consensus         4 ~~~-~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~---------~~~~~~~Dv~d~   71 (257)
T PRK08594          4 SLE-GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQ---------ESLLLPCDVTSD   71 (257)
T ss_pred             ccC-CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CC---------ceEEEecCCCCH
Confidence            456 8999999997  89999999999999999999987642   2233222221  12         278899999999


Q ss_pred             HH-HHHhhh
Q 034737           77 KF-ALAFLR   84 (85)
Q Consensus        77 ~~-~~~~~~   84 (85)
                      ++ ++++++
T Consensus        72 ~~v~~~~~~   80 (257)
T PRK08594         72 EEITACFET   80 (257)
T ss_pred             HHHHHHHHH
Confidence            99 988764

>PLN02253 xanthoxin dehydrogenase

Probab=99.50  E-value=1.9e-13  Score=83.34  Aligned_cols=71  Identities=35%  Similarity=0.528  Sum_probs=58.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++++.+..+....++.. .         .++.++++|++|+++ +++
T Consensus        16 l~-~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~Dl~d~~~~~~~   84 (280)
T PLN02253         16 LL-GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-E---------PNVCFFHCDVTVEDDVSRA   84 (280)
T ss_pred             cC-CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-C---------CceEEEEeecCCHHHHHHH
Confidence            55 89999999999999999999999999999999987666555544421 1         228899999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      ++.
T Consensus        85 ~~~   87 (280)
T PLN02253         85 VDF   87 (280)
T ss_pred             HHH
Confidence            763

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.50  E-value=2.8e-13  Score=80.98  Aligned_cols=70  Identities=33%  Similarity=0.384  Sum_probs=60.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||++++||.+++++|+++|++|++++|++++.+...+.+...+..         +.++.+|++++++ ++++++
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~~~~   77 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGR---------AHAIAADLADPASVQRFFDA   77 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHHHHHHH
Confidence            899999999999999999999999999999999988777777666544333         8899999999999 887754

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.50  E-value=1.7e-13  Score=85.17  Aligned_cols=70  Identities=20%  Similarity=0.176  Sum_probs=58.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++|||+++++.|+.+| ++|++++|+.++.+.+.+++....         ..+.++.+|+++.++ +++++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~---------~~~~~~~~Dl~~~~~v~~~~~   73 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPK---------DSYTIMHLDLGSLDSVRQFVQ   73 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCC---------CeEEEEEcCCCCHHHHHHHHH
Confidence            7899999999999999999999999 999999999877776666553222         227889999999999 88876


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        74 ~   74 (314)
T TIGR01289        74 Q   74 (314)
T ss_pred             H
Confidence            4

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.50  E-value=2.8e-13  Score=82.10  Aligned_cols=71  Identities=24%  Similarity=0.174  Sum_probs=54.6

Q ss_pred             CCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |. +|+++|||+++  |||++++++|+++|++|++.+|+. ..+...+++......         ..++++|++|+++ +
T Consensus         6 ~~-~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~---------~~~~~~Dv~~~~~v~   74 (260)
T PRK06603          6 LQ-GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC---------NFVSELDVTNPKSIS   74 (260)
T ss_pred             cC-CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC---------ceEEEccCCCHHHHH
Confidence            45 89999999997  999999999999999999998874 333334444332211         3467899999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        75 ~~~~~   79 (260)
T PRK06603         75 NLFDD   79 (260)
T ss_pred             HHHHH
Confidence            88764

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.50  E-value=2.7e-13  Score=82.12  Aligned_cols=74  Identities=23%  Similarity=0.357  Sum_probs=56.7

Q ss_pred             CCCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCcc--chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            1 MELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEE--KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         1 ~~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      |+|. +|+++|||++  +|||++++++|++.|++|++.+++.+  ..+...+++......         +.++++|++|+
T Consensus         2 ~~l~-~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~d~   71 (258)
T PRK07370          2 LDLT-GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNP---------SLFLPCDVQDD   71 (258)
T ss_pred             cccC-CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCc---------ceEeecCcCCH
Confidence            3567 8999999986  89999999999999999988876543  234444444433222         67899999999


Q ss_pred             HH-HHHhhh
Q 034737           77 KF-ALAFLR   84 (85)
Q Consensus        77 ~~-~~~~~~   84 (85)
                      ++ ++++++
T Consensus        72 ~~v~~~~~~   80 (258)
T PRK07370         72 AQIEETFET   80 (258)
T ss_pred             HHHHHHHHH
Confidence            99 988764

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.50  E-value=3.3e-13  Score=81.16  Aligned_cols=72  Identities=32%  Similarity=0.398  Sum_probs=61.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +++++|||++++||++++++|+++|++|++++|++++++.+..++...+..         +.++.+|++++++ .++
T Consensus         7 ~~-~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~~~   76 (258)
T PRK06949          7 LE-GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGA---------AHVVSLDVTDYQSIKAA   76 (258)
T ss_pred             CC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEecCCCHHHHHHH
Confidence            55 899999999999999999999999999999999988877777766544333         8899999999998 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        77 ~~~   79 (258)
T PRK06949         77 VAH   79 (258)
T ss_pred             HHH
Confidence            653

>PRK05599 hypothetical protein; Provisional

Probab=99.49  E-value=2.3e-13  Score=81.85  Aligned_cols=69  Identities=19%  Similarity=0.244  Sum_probs=58.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      |+++|||+++|||++++++|+ +|++|++++|++++++.+.+++...+..        .+.++.+|++|+++ ++++++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~--------~~~~~~~Dv~d~~~v~~~~~~   70 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGAT--------SVHVLSFDAQDLDTHRELVKQ   70 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCC--------ceEEEEcccCCHHHHHHHHHH
Confidence            479999999999999999999 5999999999998888887777654321        27789999999999 888764

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.8e-13  Score=82.61  Aligned_cols=69  Identities=29%  Similarity=0.350  Sum_probs=56.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      .++++|||+++|||.+++++|+++|++|++++|+.+.++...+++...+          ++.++.+|++++++ .+++++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~Dl~~~~~i~~~~~~   71 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA----------RVSVYAADVRDADALAAAAAD   71 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC----------eeEEEEcCCCCHHHHHHHHHH
Confidence            5789999999999999999999999999999999876665555443211          28899999999999 887654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.49  E-value=3e-13  Score=81.03  Aligned_cols=72  Identities=31%  Similarity=0.447  Sum_probs=59.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEE-EecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTV-VDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      |. +++++|||++++||++++++|+++|++|++ ..|+.++.+...+++...+..         +.++.+|++|+++ .+
T Consensus         2 ~~-~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~   71 (250)
T PRK08063          2 FS-GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRK---------ALAVKANVGDVEKIKE   71 (250)
T ss_pred             CC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe---------EEEEEcCCCCHHHHHH
Confidence            45 789999999999999999999999999876 467777777766666544433         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        72 ~~~~   75 (250)
T PRK08063         72 MFAQ   75 (250)
T ss_pred             HHHH
Confidence            7764

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.49  E-value=3.3e-13  Score=80.66  Aligned_cols=70  Identities=39%  Similarity=0.493  Sum_probs=59.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||++++||.+++++|+++|++|++++|+.+........+...+..         +.++.+|++|+++ .+++++
T Consensus         6 ~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~~~~~~~~   76 (251)
T PRK12826          6 GRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGK---------ARARQVDVRDRAALKAAVAA   76 (251)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHHHHHHHH
Confidence            889999999999999999999999999999999987766666666544433         8899999999998 887753

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.49  E-value=2.9e-13  Score=82.60  Aligned_cols=71  Identities=20%  Similarity=0.328  Sum_probs=54.4

Q ss_pred             CCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+ +|+++|||+++  |||++++++|+++|++|++++|+....+.. +++......         ..++++|++|+++ +
T Consensus         5 l~-~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~-~~~~~~~g~---------~~~~~~Dv~d~~~v~   73 (271)
T PRK06505          5 MQ-GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRV-KPLAESLGS---------DFVLPCDVEDIASVD   73 (271)
T ss_pred             cC-CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHH-HHHHHhcCC---------ceEEeCCCCCHHHHH
Confidence            56 89999999996  999999999999999999999875433332 223222111         3578999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        74 ~~~~~   78 (271)
T PRK06505         74 AVFEA   78 (271)
T ss_pred             HHHHH
Confidence            88765

>PRK06196 oxidoreductase; Provisional

Probab=99.48  E-value=3.6e-13  Score=83.56  Aligned_cols=68  Identities=29%  Similarity=0.328  Sum_probs=57.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+.+|++|++++|+.+..+....++.    .         +.++.+|++|.++ +++
T Consensus        24 l~-~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~---------v~~~~~Dl~d~~~v~~~   89 (315)
T PRK06196         24 LS-GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----G---------VEVVMLDLADLESVRAF   89 (315)
T ss_pred             CC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----h---------CeEEEccCCCHHHHHHH
Confidence            45 8999999999999999999999999999999999876666554442    2         6789999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        90 ~~~   92 (315)
T PRK06196         90 AER   92 (315)
T ss_pred             HHH
Confidence            764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.48  E-value=4.6e-13  Score=80.13  Aligned_cols=70  Identities=34%  Similarity=0.474  Sum_probs=60.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||++++||.+++++|+++|+.|++++|+.+..+.+...+...+..         +.++.+|+++.++ ++++++
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~d~~~~~~~~~~~~~   73 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGN---------AQAFACDITDRDSVDTAVAA   73 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHHHHHHH
Confidence            889999999999999999999999999999999987777776666544333         8899999999999 887653

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.48  E-value=4.8e-13  Score=79.82  Aligned_cols=73  Identities=33%  Similarity=0.492  Sum_probs=61.3

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |+|. +++++|||++++||.+++++|+++|++|+++ .|+++..+.....+...+..         +.++.+|++++++ 
T Consensus         1 ~~~~-~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~   70 (247)
T PRK05565          1 MKLM-GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGD---------AIAVKADVSSEEDV   70 (247)
T ss_pred             CCCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHH
Confidence            6778 8999999999999999999999999999998 88877766666665543333         8899999999999 


Q ss_pred             HHHhh
Q 034737           79 ALAFL   83 (85)
Q Consensus        79 ~~~~~   83 (85)
                      .++++
T Consensus        71 ~~~~~   75 (247)
T PRK05565         71 ENLVE   75 (247)
T ss_pred             HHHHH
Confidence            88765

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.48  E-value=5.6e-13  Score=80.47  Aligned_cols=72  Identities=26%  Similarity=0.395  Sum_probs=57.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +++++|||++++||++++++|+++|++|++++|+.. .....+.+...+..         +.++.+|++++++ ++
T Consensus         3 ~~~-~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~v~~   71 (263)
T PRK08226          3 KLT-GKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHR---------CTAVVADVRDPASVAA   71 (263)
T ss_pred             CCC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCc---------eEEEECCCCCHHHHHH
Confidence            456 899999999999999999999999999999999864 33344444333323         7889999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        72 ~~~~   75 (263)
T PRK08226         72 AIKR   75 (263)
T ss_pred             HHHH
Confidence            8764

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.48  E-value=3.3e-13  Score=81.50  Aligned_cols=67  Identities=18%  Similarity=0.234  Sum_probs=57.7

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++|||+++|||++++++|+++|++|++++|+++..+...+++.... .         +.++.+|++|+++ ++++++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~---------~~~~~~Dv~d~~~~~~~~~~   69 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-E---------VYAVKADLSDKDDLKNLVKE   69 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-C---------ceEEEcCCCCHHHHHHHHHH
Confidence            69999999999999999999999999999999887777777665322 2         7889999999999 888764

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.48  E-value=5.4e-13  Score=79.41  Aligned_cols=73  Identities=22%  Similarity=0.285  Sum_probs=60.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+++ +++++|||++++||..+++.|+++|++|++++|+++..+.+.+.+... ..         +.++++|++++++ +
T Consensus         1 ~~~~-~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~---------~~~~~~Dl~~~~~~~   69 (238)
T PRK05786          1 MRLK-GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GN---------IHYVVGDVSSTESAR   69 (238)
T ss_pred             CCcC-CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC---------eEEEECCCCCHHHHH
Confidence            6778 899999999999999999999999999999999987666554544322 12         7889999999998 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        70 ~~~~~   74 (238)
T PRK05786         70 NVIEK   74 (238)
T ss_pred             HHHHH
Confidence            77653

>PRK05717 oxidoreductase; Validated

Probab=99.48  E-value=2.9e-13  Score=81.52  Aligned_cols=70  Identities=34%  Similarity=0.471  Sum_probs=56.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||++++||++++++|+++|++|++++++....+...+.+   ...         +.++.+|++++++ .+
T Consensus         7 ~~~-~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~---------~~~~~~Dl~~~~~~~~   73 (255)
T PRK05717          7 GHN-GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GEN---------AWFIAMDVADEAQVAA   73 (255)
T ss_pred             ccC-CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCc---------eEEEEccCCCHHHHHH
Confidence            356 899999999999999999999999999999998876554443322   122         7899999999998 87


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        74 ~~~~   77 (255)
T PRK05717         74 GVAE   77 (255)
T ss_pred             HHHH
Confidence            7654

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.47  E-value=5e-13  Score=83.37  Aligned_cols=63  Identities=27%  Similarity=0.420  Sum_probs=54.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      |++++|||+++|||++++++|+++|++|++++|++++++...+++...++..       ++..+.+|+++
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~-------~~~~~~~Dl~~  115 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKT-------QIKTVVVDFSG  115 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCc-------EEEEEEEECCC
Confidence            7899999999999999999999999999999999998888888886554321       27888999985

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.47  E-value=6.5e-13  Score=80.06  Aligned_cols=72  Identities=24%  Similarity=0.353  Sum_probs=56.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|++.|++|+++++..  .+...+.+...+..         +.++++|++|.++ +
T Consensus         6 ~~l~-~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~   73 (253)
T PRK08993          6 FSLE-GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTALGRR---------FLSLTADLRKIDGIP   73 (253)
T ss_pred             cCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhcCCe---------EEEEECCCCCHHHHH
Confidence            3566 89999999999999999999999999999887754  23334444332222         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        74 ~~~~~   78 (253)
T PRK08993         74 ALLER   78 (253)
T ss_pred             HHHHH
Confidence            88764

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.47  E-value=8.1e-13  Score=79.14  Aligned_cols=72  Identities=32%  Similarity=0.420  Sum_probs=57.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      |. +++++|||+++|||++++++|+.+|++|++++|+.+ ..+.....+...+..         +.++.+|++++++ .+
T Consensus         4 ~~-~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~~   73 (248)
T PRK07806          4 LP-GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGR---------ASAVGADLTDEESVAA   73 (248)
T ss_pred             CC-CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCc---------eEEEEcCCCCHHHHHH
Confidence            55 899999999999999999999999999999988753 344555555433322         7889999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        74 ~~~~   77 (248)
T PRK07806         74 LMDT   77 (248)
T ss_pred             HHHH
Confidence            7653

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.47  E-value=6.2e-13  Score=80.64  Aligned_cols=71  Identities=21%  Similarity=0.295  Sum_probs=53.9

Q ss_pred             CCCCcEEEEecC--CChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGG--ASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |. +|+++|||+  ++|||++++++|+++|++|++++|+. +.+...+++......         ..++++|++|+++ +
T Consensus         4 ~~-~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~   72 (261)
T PRK08690          4 LQ-GKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS---------ELVFRCDVASDDEIN   72 (261)
T ss_pred             cC-CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC---------ceEEECCCCCHHHHH
Confidence            45 899999997  67999999999999999999988764 233333333322222         4678999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        73 ~~~~~   77 (261)
T PRK08690         73 QVFAD   77 (261)
T ss_pred             HHHHH
Confidence            88764

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.47  E-value=2.5e-13  Score=80.75  Aligned_cols=76  Identities=49%  Similarity=0.640  Sum_probs=62.3

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. ||++++||+.+|||+++++.|+.+|.++.+++-+.++ .++...+++.++.       .++.|++||+++..+ +
T Consensus         1 m~~t-GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~-------~~v~F~~~DVt~~~~~~   71 (261)
T KOG4169|consen    1 MDLT-GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPS-------VSVIFIKCDVTNRGDLE   71 (261)
T ss_pred             Cccc-CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCC-------ceEEEEEeccccHHHHH
Confidence            6788 9999999999999999999999999988777766665 3444556655544       349999999999999 9


Q ss_pred             HHhhhC
Q 034737           80 LAFLRL   85 (85)
Q Consensus        80 ~~~~~~   85 (85)
                      +.++++
T Consensus        72 ~~f~ki   77 (261)
T KOG4169|consen   72 AAFDKI   77 (261)
T ss_pred             HHHHHH
Confidence            988763

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.47  E-value=7.2e-13  Score=79.12  Aligned_cols=74  Identities=30%  Similarity=0.407  Sum_probs=59.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |++. +++++|||++++||++++++|+++|++++++.++.. ..+...+.+...+..         +.++.+|++++++ 
T Consensus         1 ~~~~-~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~   70 (245)
T PRK12937          1 MTLS-NKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGR---------AIAVQADVADAAAV   70 (245)
T ss_pred             CCCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHH
Confidence            6778 999999999999999999999999999988876543 344455555433333         8899999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        71 ~~~~~~   76 (245)
T PRK12937         71 TRLFDA   76 (245)
T ss_pred             HHHHHH
Confidence            888764

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.46  E-value=7.3e-13  Score=80.52  Aligned_cols=75  Identities=27%  Similarity=0.352  Sum_probs=60.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||++++||.+++++|+++|++|++++|+++..+....++.....       ..++.++.+|++++++ .
T Consensus         3 ~~~~-~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-------~~~~~~~~~Dl~~~~~~~   74 (276)
T PRK05875          3 LSFQ-DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKG-------AGAVRYEPADVTDEDQVA   74 (276)
T ss_pred             cCCC-CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccC-------CCceEEEEcCCCCHHHHH
Confidence            3456 89999999999999999999999999999999998776666655543321       1228899999999998 8


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus        75 ~~~~   78 (276)
T PRK05875         75 RAVD   78 (276)
T ss_pred             HHHH
Confidence            7765

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.46  E-value=8.1e-13  Score=78.62  Aligned_cols=72  Identities=29%  Similarity=0.373  Sum_probs=60.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      .+. +++++|||++++||.+++++|+.+|++|++++|+++......+.+... ..         +.++.+|+++.++ .+
T Consensus         3 ~~~-~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~---------~~~~~~D~~~~~~~~~   71 (237)
T PRK07326          3 SLK-GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GN---------VLGLAADVRDEADVQR   71 (237)
T ss_pred             CCC-CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-Cc---------EEEEEccCCCHHHHHH
Confidence            455 899999999999999999999999999999999987776666665432 22         8899999999998 87


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        72 ~~~~   75 (237)
T PRK07326         72 AVDA   75 (237)
T ss_pred             HHHH
Confidence            7653

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.46  E-value=9.6e-13  Score=79.52  Aligned_cols=73  Identities=27%  Similarity=0.428  Sum_probs=58.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      ++. +|+++|||++++||.+++++|+++|++|+++.++. +..+.....+...+..         +.++.+|++|.++ .
T Consensus         4 ~~~-~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~i~   73 (261)
T PRK08936          4 DLE-GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGE---------AIAVKGDVTVESDVV   73 (261)
T ss_pred             CCC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCe---------EEEEEecCCCHHHHH
Confidence            356 89999999999999999999999999999888854 3455555555443333         7899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        74 ~~~~~   78 (261)
T PRK08936         74 NLIQT   78 (261)
T ss_pred             HHHHH
Confidence            87653

>PRK06128 oxidoreductase; Provisional

Probab=99.45  E-value=9.3e-13  Score=81.24  Aligned_cols=72  Identities=36%  Similarity=0.535  Sum_probs=56.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc--chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE--KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++++.+  ..+...+.+...+..         +.++.+|++++++ +
T Consensus        53 l~-~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~v~  122 (300)
T PRK06128         53 LQ-GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRK---------AVALPGDLKDEAFCR  122 (300)
T ss_pred             cC-CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCe---------EEEEecCCCCHHHHH
Confidence            45 799999999999999999999999999998887643  334444444433333         7899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus       123 ~~~~~  127 (300)
T PRK06128        123 QLVER  127 (300)
T ss_pred             HHHHH
Confidence            88764

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.45  E-value=9.1e-13  Score=78.84  Aligned_cols=70  Identities=19%  Similarity=0.142  Sum_probs=58.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      |+++|||+++|||.+++++|+++|++|++++|+++..+...+.+.....        .++.++++|++++++ ++++++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~   72 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGA--------VAVSTHELDILDTASHAAFLDS   72 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcC--------CeEEEEecCCCChHHHHHHHHH
Confidence            5899999999999999999999999999999998777666665543321        238899999999998 887654

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.45  E-value=1.1e-12  Score=79.04  Aligned_cols=72  Identities=28%  Similarity=0.280  Sum_probs=59.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||++++||.+++++|+++|++|++++|+....+...+.+......       .++.++.+|+++.++ .+++++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~i~~~~~~   74 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGE-------GMAYGFGADATSEQSVLALSRG   74 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCC-------ceeEEEEccCCCHHHHHHHHHH
Confidence            689999999999999999999999999999999987776666655543221       128899999999998 877654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.45  E-value=9.4e-13  Score=78.13  Aligned_cols=72  Identities=22%  Similarity=0.250  Sum_probs=58.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||++++||++++++|+++|++|++++|+++......+.+...  .         +.++.+|+.|.++ .
T Consensus         3 ~~~~-~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~---------~~~~~~D~~~~~~~~   70 (239)
T PRK12828          3 HSLQ-GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--A---------LRIGGIDLVDPQAAR   70 (239)
T ss_pred             CCCC-CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--C---------ceEEEeecCCHHHHH
Confidence            4566 899999999999999999999999999999999887665554444322  2         5678899999998 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        71 ~~~~~   75 (239)
T PRK12828         71 RAVDE   75 (239)
T ss_pred             HHHHH
Confidence            87763

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.45  E-value=7.5e-13  Score=88.50  Aligned_cols=72  Identities=29%  Similarity=0.412  Sum_probs=62.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|+++.++...+++...+..         +.++.+|++|.++ +++
T Consensus       369 ~~-~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~~~~~  438 (657)
T PRK07201        369 LV-GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGT---------AHAYTCDLTDSAAVDHT  438 (657)
T ss_pred             CC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEecCCCHHHHHHH
Confidence            45 889999999999999999999999999999999988887777777554433         8899999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus       439 ~~~  441 (657)
T PRK07201        439 VKD  441 (657)
T ss_pred             HHH
Confidence            764

>PRK05855 short chain dehydrogenase; Validated

Probab=99.45  E-value=7.8e-13  Score=86.86  Aligned_cols=72  Identities=32%  Similarity=0.396  Sum_probs=62.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +++++|||+++|||++++++|+.+|++|++++|+.+..+.+.+.+...+..         +.++.+|++|+++ .++
T Consensus       313 ~~-~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~~~~~  382 (582)
T PRK05855        313 FS-GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAV---------AHAYRVDVSDADAMEAF  382 (582)
T ss_pred             CC-CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEEcCCCCHHHHHHH
Confidence            44 789999999999999999999999999999999988888877777655444         8899999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus       383 ~~~  385 (582)
T PRK05855        383 AEW  385 (582)
T ss_pred             HHH
Confidence            764

>PRK07985 oxidoreductase; Provisional

Probab=99.45  E-value=1e-12  Score=81.01  Aligned_cols=72  Identities=36%  Similarity=0.523  Sum_probs=56.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc--cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE--EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++++.  +..+.+.+.+...+..         +.++.+|++++++ .
T Consensus        47 ~~-~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~  116 (294)
T PRK07985         47 LK-DRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRK---------AVLLPGDLSDEKFAR  116 (294)
T ss_pred             cC-CCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCe---------EEEEEccCCCHHHHH
Confidence            45 78999999999999999999999999999987653  3344444444333222         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus       117 ~~~~~  121 (294)
T PRK07985        117 SLVHE  121 (294)
T ss_pred             HHHHH
Confidence            87764

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.1e-12  Score=78.83  Aligned_cols=72  Identities=29%  Similarity=0.471  Sum_probs=56.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      |. +++++|||++++||.+++++|+++|++|++. .|+.+..+.....+...+..         +.++.+|++|+++ .+
T Consensus         4 ~~-~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~d~~~i~~   73 (254)
T PRK12746          4 LD-GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGK---------AFLIEADLNSIDGVKK   73 (254)
T ss_pred             CC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---------EEEEEcCcCCHHHHHH
Confidence            45 7899999999999999999999999998775 57766555555555432222         7889999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        74 ~~~~   77 (254)
T PRK12746         74 LVEQ   77 (254)
T ss_pred             HHHH
Confidence            7663

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.44  E-value=6.7e-13  Score=79.85  Aligned_cols=66  Identities=27%  Similarity=0.381  Sum_probs=55.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||++++++|+.+|++|++++|+.+.        ......         +.++++|++++++ +
T Consensus         2 ~~~~-~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~---------~~~~~~D~~~~~~~~   63 (252)
T PRK07856          2 LDLT-GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRP---------AEFHAADVRDPDQVA   63 (252)
T ss_pred             CCCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCc---------eEEEEccCCCHHHHH
Confidence            5677 9999999999999999999999999999999998653        111122         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        64 ~~~~~   68 (252)
T PRK07856         64 ALVDA   68 (252)
T ss_pred             HHHHH
Confidence            87754

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.1e-12  Score=79.92  Aligned_cols=70  Identities=29%  Similarity=0.303  Sum_probs=57.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||++++||+++++.|+.+|++|++++|+.+..+...+++...+..       .++.++.+|++|+++ ++ ++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~d~~~~~~-~~   73 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQ-------QNIKVQQLDVTDQNSIHN-FQ   73 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCC-------CceeEEecCCCCHHHHHH-HH
Confidence            789999999999999999999999999999999987776766555433211       228899999999998 76 44

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.44  E-value=1.1e-12  Score=80.08  Aligned_cols=71  Identities=17%  Similarity=0.184  Sum_probs=53.5

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |. +|+++|||++  +|||++++++|+++|++|++++|+.. ..+..+++......         ..++++|++|+++ +
T Consensus         8 ~~-~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~v~   76 (272)
T PRK08159          8 MA-GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGA---------FVAGHCDVTDEASID   76 (272)
T ss_pred             cc-CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCC---------ceEEecCCCCHHHHH
Confidence            44 8999999997  89999999999999999999888642 22222233222122         5678999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        77 ~~~~~   81 (272)
T PRK08159         77 AVFET   81 (272)
T ss_pred             HHHHH
Confidence            88765

>PRK12743 oxidoreductase; Provisional

Probab=99.44  E-value=1.1e-12  Score=79.10  Aligned_cols=70  Identities=30%  Similarity=0.324  Sum_probs=57.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++|||++++++|+++|++|+++++ +.+..+...+++...+..         +.++.+|++++++ +++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~~~   72 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVR---------AEIRQLDLSDLPEGAQALD   72 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCc---------eEEEEccCCCHHHHHHHHH
Confidence            679999999999999999999999999988865 445566666666544333         8899999999999 88876


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        73 ~   73 (256)
T PRK12743         73 K   73 (256)
T ss_pred             H
Confidence            4

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.44  E-value=1.2e-12  Score=78.93  Aligned_cols=74  Identities=23%  Similarity=0.264  Sum_probs=56.2

Q ss_pred             CCCCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCc-----------cchHHHHHHHHHHhhhccCCCCCCceE
Q 034737            1 MELKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSE-----------EKGNEVAALVEKENAKFHSNLGFPSAM   67 (85)
Q Consensus         1 ~~l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~~~~~~~~   67 (85)
                      |++. +|+++|||+++  |||.+++++|+.+|++|++++|++           ........++...+.         ++.
T Consensus         1 ~~l~-~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~   70 (256)
T PRK12748          1 LPLM-KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGV---------RCE   70 (256)
T ss_pred             CCCC-CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCC---------eEE
Confidence            6788 89999999984  899999999999999999999872           111123333322222         288


Q ss_pred             EEEecCCCHHH-HHHhhh
Q 034737           68 FIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus        68 ~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++.+|+++.++ .+++++
T Consensus        71 ~~~~D~~~~~~~~~~~~~   88 (256)
T PRK12748         71 HMEIDLSQPYAPNRVFYA   88 (256)
T ss_pred             EEECCCCCHHHHHHHHHH
Confidence            99999999999 887764

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.5e-12  Score=80.18  Aligned_cols=73  Identities=41%  Similarity=0.598  Sum_probs=57.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      .+. +|+++|||++++||.+++++|+++|++|++++++.. ..+.....+...+..         +.++.+|+++.++ .
T Consensus        43 ~~~-~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~  112 (290)
T PRK06701         43 KLK-GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVK---------CLLIPGDVSDEAFCK  112 (290)
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCe---------EEEEEccCCCHHHHH
Confidence            455 899999999999999999999999999999998764 344444444333323         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus       113 ~~~~~  117 (290)
T PRK06701        113 DAVEE  117 (290)
T ss_pred             HHHHH
Confidence            87754

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.44  E-value=8.2e-13  Score=79.18  Aligned_cols=71  Identities=28%  Similarity=0.448  Sum_probs=55.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++++ .+..+.+...+   ...         +.++++|++++++ 
T Consensus         1 ~~l~-~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~   67 (253)
T PRK08642          1 MQIS-EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDR---------AIALQADVTDREQV   67 (253)
T ss_pred             CCCC-CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCc---------eEEEEcCCCCHHHH
Confidence            7788 8999999999999999999999999999887654 33333332222   112         8899999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        68 ~~~~~~   73 (253)
T PRK08642         68 QAMFAT   73 (253)
T ss_pred             HHHHHH
Confidence            887764

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.5e-12  Score=78.55  Aligned_cols=73  Identities=26%  Similarity=0.396  Sum_probs=55.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc----cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE----EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTK   77 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~   77 (85)
                      .+. +|+++|||+++|||.+++++|+++|++|++++++.    +..+...+++...+..         +.++++|+++++
T Consensus         5 ~l~-~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~   74 (257)
T PRK12744          5 SLK-GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAK---------AVAFQADLTTAA   74 (257)
T ss_pred             CCC-CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCc---------EEEEecCcCCHH
Confidence            356 89999999999999999999999999977665433    2333444444333223         889999999999


Q ss_pred             H-HHHhhh
Q 034737           78 F-ALAFLR   84 (85)
Q Consensus        78 ~-~~~~~~   84 (85)
                      + ++++++
T Consensus        75 ~~~~~~~~   82 (257)
T PRK12744         75 AVEKLFDD   82 (257)
T ss_pred             HHHHHHHH
Confidence            9 888764

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.44  E-value=1.7e-12  Score=77.32  Aligned_cols=74  Identities=32%  Similarity=0.418  Sum_probs=58.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |+|. +++++|||++++||.+++++|+++|++|+++.++.. ..+....++...+..         +.++.+|++++++ 
T Consensus         1 ~~~~-~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~   70 (248)
T PRK05557          1 MSLE-GKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGK---------ALAVQGDVSDAESV   70 (248)
T ss_pred             CCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHH
Confidence            6777 899999999999999999999999999988877654 344444444433333         8899999999998 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      .+++++
T Consensus        71 ~~~~~~   76 (248)
T PRK05557         71 ERAVDE   76 (248)
T ss_pred             HHHHHH
Confidence            887653

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.2e-12  Score=78.73  Aligned_cols=70  Identities=26%  Similarity=0.379  Sum_probs=56.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++|||.+++++|++.|++|++.+ ++.+..+....++...+..         +..+.+|+++.++ ..+++
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~   74 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS---------AFSIGANLESLHGVEALYS   74 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCc---------eEEEecccCCHHHHHHHHH
Confidence            89999999999999999999999999998875 5556666666555543333         7789999999988 77665


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      .
T Consensus        75 ~   75 (252)
T PRK12747         75 S   75 (252)
T ss_pred             H
Confidence            3

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.6e-12  Score=78.55  Aligned_cols=72  Identities=26%  Similarity=0.283  Sum_probs=59.1

Q ss_pred             CcEEEEecCCC-hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGAS-GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~-gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++ |||+++++.|+.+|++|++++++.++.+...+.+....+.       .++.++++|++++++ +++++
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~   89 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGL-------GRVEAVVCDVTSEAQVDALID   89 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCC-------ceEEEEEccCCCHHHHHHHHH
Confidence            79999999985 9999999999999999999999887777776666543221       127889999999999 88776


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        90 ~   90 (262)
T PRK07831         90 A   90 (262)
T ss_pred             H
Confidence            4

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1.3e-12  Score=79.31  Aligned_cols=69  Identities=30%  Similarity=0.512  Sum_probs=59.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++++|||+++|||++++++|+++|++|++++|+.+..+....++...+..         +.++.+|++++++ .++++.
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~~~~~~   70 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGD---------GFYQRCDVRDYSQLTALAQA   70 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEccCCCHHHHHHHHHH
Confidence            47999999999999999999999999999999988877777777654444         8899999999998 887653

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1.4e-12  Score=79.73  Aligned_cols=68  Identities=21%  Similarity=0.224  Sum_probs=56.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+ +|||++++++|. +|++|++++|+.+.++...+++...+..         +.++++|++|+++ ++++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dv~d~~~i~~~~~~   70 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFD---------VSTQEVDVSSRESVKALAAT   70 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEEeecCCHHHHHHHHHH
Confidence            689999998 699999999996 8999999999987777766666543333         8899999999999 888764

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1.6e-12  Score=77.80  Aligned_cols=70  Identities=24%  Similarity=0.333  Sum_probs=56.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      .+. +|+++|||++++||++++++|+++|++|++++|+.+..+...+++   +..         +.++++|+++.++ ..
T Consensus         3 ~~~-~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~~   69 (249)
T PRK06500          3 RLQ-GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GES---------ALVIRADAGDVAAQKA   69 (249)
T ss_pred             CCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCc---------eEEEEecCCCHHHHHH
Confidence            456 899999999999999999999999999999999876555444333   222         7889999999988 77


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus        70 ~~~~   73 (249)
T PRK06500         70 LAQA   73 (249)
T ss_pred             HHHH
Confidence            7653

>TIGR02415 23BDH acetoin reductases

Probab=99.43  E-value=1.4e-12  Score=78.25  Aligned_cols=69  Identities=36%  Similarity=0.487  Sum_probs=58.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      |+++|||++++||.+++++|++.|++|++++|+++..+....++...+..         +.++.+|++|+++ .+++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~i~~~~~~   70 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGK---------AVAYKLDVSDKDQVFSAIDQ   70 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEEcCCCCHHHHHHHHHH
Confidence            58999999999999999999999999999999987777766666544333         8899999999999 887653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.43  E-value=7.5e-13  Score=80.09  Aligned_cols=69  Identities=25%  Similarity=0.246  Sum_probs=54.1

Q ss_pred             CCCCcEEEEecC--CChHHHHHHHHHHhCCCEEEEEecCc--cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            3 LKPGLSAFVTGG--ASGIGRALSLALAGKGVFVTVVDLSE--EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         3 l~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      +. +|+++|||+  ++|||++++++|+++|++|++++|+.  +..+...+++.   ..         +.++.+|++|+++
T Consensus         5 ~~-~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~---~~---------~~~~~~Dv~~~~~   71 (256)
T PRK07889          5 LE-GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP---EP---------APVLELDVTNEEH   71 (256)
T ss_pred             cc-CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC---CC---------CcEEeCCCCCHHH
Confidence            56 899999999  89999999999999999999998764  22333333221   12         6789999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       ++++++
T Consensus        72 i~~~~~~   78 (256)
T PRK07889         72 LASLADR   78 (256)
T ss_pred             HHHHHHH
Confidence             888764

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.43  E-value=2e-12  Score=78.00  Aligned_cols=70  Identities=29%  Similarity=0.357  Sum_probs=55.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++|||++++++|+++|++|+++++. .+..+.+...+...+..         +.++.+|++|.++ .++++
T Consensus         9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~d~~~~~~~~~   79 (258)
T PRK09134          9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRR---------AVALQADLADEAEVRALVA   79 (258)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCe---------EEEEEcCCCCHHHHHHHHH
Confidence            7899999999999999999999999999887664 44455555555433333         8899999999999 88775


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        80 ~   80 (258)
T PRK09134         80 R   80 (258)
T ss_pred             H
Confidence            3

>PRK06484 short chain dehydrogenase; Validated

Probab=99.43  E-value=1.3e-12  Score=85.53  Aligned_cols=71  Identities=28%  Similarity=0.324  Sum_probs=59.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |.+. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++   +..         +.++.+|++++++ +
T Consensus         1 ~~~~-~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~   67 (520)
T PRK06484          1 SKAQ-SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPD---------HHALAMDVSDEAQIR   67 (520)
T ss_pred             CCCC-CeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc---------eeEEEeccCCHHHHH
Confidence            4566 899999999999999999999999999999999987766655444   222         7789999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        68 ~~~~~   72 (520)
T PRK06484         68 EGFEQ   72 (520)
T ss_pred             HHHHH
Confidence            88764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.42  E-value=1.6e-12  Score=77.94  Aligned_cols=70  Identities=37%  Similarity=0.490  Sum_probs=58.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||++++||++++++|+++|++|++++|+.+..+.+..++......         +.++.+|++++++ .+++++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~~   71 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGS---------VIYLVADVTKEDEIADMIAA   71 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999987776666665433333         8899999999998 777653

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.9e-12  Score=78.90  Aligned_cols=70  Identities=27%  Similarity=0.326  Sum_probs=57.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      .|+++|||++++||++++++|+.+|++|++++|+.+..+.....+...+..         +.++.+|++++++ .+++++
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~~~~   80 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGE---------AVAFPLDVTDPDSVKSFVAQ   80 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHHHHHHHH
Confidence            679999999999999999999999999999999876666555555433333         8889999999999 887763

>PRK06398 aldose dehydrogenase; Validated

Probab=99.42  E-value=1.2e-12  Score=79.27  Aligned_cols=62  Identities=32%  Similarity=0.409  Sum_probs=53.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ +|+++|||+++|||++++++|+++|++|++++|+.....           .         +.++++|++++++ ++
T Consensus         3 ~l~-gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----------~---------~~~~~~D~~~~~~i~~   61 (258)
T PRK06398          3 GLK-DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----------D---------VDYFKVDVSNKEQVIK   61 (258)
T ss_pred             CCC-CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----------c---------eEEEEccCCCHHHHHH
Confidence            467 899999999999999999999999999999998864321           2         7889999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        62 ~~~~   65 (258)
T PRK06398         62 GIDY   65 (258)
T ss_pred             HHHH
Confidence            7764

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.42  E-value=1.7e-12  Score=78.38  Aligned_cols=70  Identities=19%  Similarity=0.250  Sum_probs=58.0

Q ss_pred             EEEEecCCChHHHHHHHHHHh----CCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            8 SAFVTGGASGIGRALSLALAG----KGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~----~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      +++|||+++|||++++++|++    .|++|++++|+.+.++.+.+++....+.       .++.++.+|++++++ ++++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~-------~~v~~~~~Dl~~~~~v~~~~   74 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSG-------LRVVRVSLDLGAEAGLEQLL   74 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCC-------ceEEEEEeccCCHHHHHHHH
Confidence            689999999999999999997    7999999999988888877777542111       228899999999999 8877


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      +.
T Consensus        75 ~~   76 (256)
T TIGR01500        75 KA   76 (256)
T ss_pred             HH
Confidence            54

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.42  E-value=2e-12  Score=77.87  Aligned_cols=72  Identities=33%  Similarity=0.511  Sum_probs=59.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +. +|+++|||++++||..++++|+.+|++ |++++|+.+..+.....+...+..         +.++.+|++++++ .+
T Consensus         4 ~~-~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~~   73 (260)
T PRK06198          4 LD-GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAK---------AVFVQADLSDVEDCRR   73 (260)
T ss_pred             CC-CcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCe---------EEEEEccCCCHHHHHH
Confidence            44 899999999999999999999999999 999999877666666566433333         7889999999998 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus        74 ~~~~   77 (260)
T PRK06198         74 VVAA   77 (260)
T ss_pred             HHHH
Confidence            7653

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.41  E-value=5.4e-13  Score=78.05  Aligned_cols=69  Identities=33%  Similarity=0.403  Sum_probs=61.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      .|++++||+++|||++++..|++.|++|++.+++...++.....|...+.          -..|.||+++.++ +.++++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~----------h~aF~~DVS~a~~v~~~l~e   83 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGD----------HSAFSCDVSKAHDVQNTLEE   83 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCc----------cceeeeccCcHHHHHHHHHH
Confidence            68999999999999999999999999999999999888888888875432          4679999999999 887765

>PRK09135 pteridine reductase; Provisional

Probab=99.41  E-value=3.5e-12  Score=76.17  Aligned_cols=73  Identities=22%  Similarity=0.239  Sum_probs=56.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +. +++++|||++++||++++++|+++|++|++++|+. +..+.....+......        .+.++.+|+++.++ .+
T Consensus         4 ~~-~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--------~~~~~~~Dl~~~~~~~~   74 (249)
T PRK09135          4 DS-AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPG--------SAAALQADLLDPDALPE   74 (249)
T ss_pred             CC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC--------ceEEEEcCCCCHHHHHH
Confidence            44 78999999999999999999999999999999864 3344444444332221        27889999999998 87


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        75 ~~~~   78 (249)
T PRK09135         75 LVAA   78 (249)
T ss_pred             HHHH
Confidence            7653

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.41  E-value=3.2e-12  Score=76.81  Aligned_cols=70  Identities=24%  Similarity=0.317  Sum_probs=55.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .|+++|||++++||.+++++|+++|++|++++|+. +..+...+.+...+..         +.++.+|++++++ .++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~   72 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE---------VIFFPADVADLSAHEAMLD   72 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCc---------eEEEEecCCCHHHHHHHHH
Confidence            57899999999999999999999999999999864 3344444444332223         8899999999998 88776


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        73 ~   73 (256)
T PRK12745         73 A   73 (256)
T ss_pred             H
Confidence            4

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.41  E-value=2.7e-12  Score=76.79  Aligned_cols=70  Identities=20%  Similarity=0.151  Sum_probs=54.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||++++||++++++|+++|++|++.. ++....+...+++...+..         +.++.+|++|.++ .++++
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~   73 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFD---------FIASEGNVGDWDSTKAAFD   73 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHHHHHH
Confidence            89999999999999999999999999988754 4444444444444433323         7888999999999 88765


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        74 ~   74 (246)
T PRK12938         74 K   74 (246)
T ss_pred             H
Confidence            3

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.41  E-value=2.6e-12  Score=77.60  Aligned_cols=70  Identities=24%  Similarity=0.385  Sum_probs=58.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||++++||++++++|+.+|++|++++|++.+.+...+.+...+..         +.++.+|++++++ .+++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~~~~~~~~   71 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGE---------ALVVPTDVSDAEACERLIEA   71 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHHHHHHH
Confidence            368999999999999999999999999999999987777666666543333         8889999999998 887653

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.40  E-value=3.5e-12  Score=76.37  Aligned_cols=72  Identities=32%  Similarity=0.427  Sum_probs=56.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +. +++++|||++++||.+++++|+.+|+.|+++.+ +++..+...+.+...+..         +.++.+|++++++ .+
T Consensus         4 ~~-~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~~   73 (247)
T PRK12935          4 LN-GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHD---------VYAVQADVSKVEDANR   73 (247)
T ss_pred             CC-CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHHHH
Confidence            45 899999999999999999999999999987654 445555555555433333         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        74 ~~~~   77 (247)
T PRK12935         74 LVEE   77 (247)
T ss_pred             HHHH
Confidence            7764

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.40  E-value=2.7e-12  Score=76.84  Aligned_cols=65  Identities=26%  Similarity=0.359  Sum_probs=53.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++++|||+++|||++++++|+.+|++|++++|+++..+.+..    ....         +.++.+|++++++ ++++++
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~---------~~~~~~D~~~~~~~~~~~~~   67 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSAN---------IFTLAFDVTDHPGTKAALSQ   67 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcCC---------CeEEEeeCCCHHHHHHHHHh
Confidence            579999999999999999999999999999998765444322    1222         7889999999999 888764

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.40  E-value=2.7e-12  Score=77.36  Aligned_cols=69  Identities=35%  Similarity=0.473  Sum_probs=53.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||++++++|+++|++|+++++..+..   .+.+...  .         +.++.+|++|+++ +
T Consensus         3 ~~l~-~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~--~---------~~~~~~Dl~~~~~~~   67 (255)
T PRK06463          3 MRFK-GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK--G---------VFTIKCDVGNRDQVK   67 (255)
T ss_pred             CCcC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC--C---------CeEEEecCCCHHHHH
Confidence            4456 89999999999999999999999999998887654321   1222211  2         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        68 ~~~~~   72 (255)
T PRK06463         68 KSKEV   72 (255)
T ss_pred             HHHHH
Confidence            88764

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.40  E-value=2.3e-12  Score=77.67  Aligned_cols=67  Identities=39%  Similarity=0.521  Sum_probs=54.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +++++|||+++|||.+++++|+++|++|++++|+....+.....+.              ..++++|++++++ +++
T Consensus         5 ~~-~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--------------~~~~~~D~~~~~~~~~~   69 (255)
T PRK06057          5 LA-GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--------------GLFVPTDVTDEDAVNAL   69 (255)
T ss_pred             CC-CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--------------CcEEEeeCCCHHHHHHH
Confidence            55 8999999999999999999999999999999998765544433321              3578999999998 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        70 ~~~   72 (255)
T PRK06057         70 FDT   72 (255)
T ss_pred             HHH
Confidence            764

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.39  E-value=3.3e-12  Score=77.68  Aligned_cols=70  Identities=27%  Similarity=0.273  Sum_probs=57.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      |+++|||+++|||++++++|+++|++|++++|+++..+...+++...+..        ...++.+|++++++ .+++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~--------~~~~~~~D~~~~~~~~~~~~~   71 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGT--------VPEHRALDISDYDAVAAFAAD   71 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC--------cceEEEeeCCCHHHHHHHHHH
Confidence            47999999999999999999999999999999887777776666544332        14568999999999 887764

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.39  E-value=4e-12  Score=76.07  Aligned_cols=70  Identities=23%  Similarity=0.331  Sum_probs=54.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +++++|||++++||.+++++|+++|+.|++.++ +++..+.....+...+..         +.++.+|++|.++ .++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~~~~~~~   72 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGE---------ALAVAADVADEADVLRLFE   72 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCc---------EEEEEeccCCHHHHHHHHH
Confidence            679999999999999999999999999888764 444444444444433222         7889999999999 88776


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        73 ~   73 (248)
T PRK06123         73 A   73 (248)
T ss_pred             H
Confidence            3

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.39  E-value=2.8e-12  Score=76.42  Aligned_cols=65  Identities=20%  Similarity=0.144  Sum_probs=52.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+++...   +.+...  .         +.++.+|++++++ ++++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~--~---------~~~~~~D~~~~~~~~~~~~~   67 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA--G---------AQCIQADFSTNAGIMAFIDE   67 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc--C---------CEEEEcCCCCHHHHHHHHHH
Confidence            689999999999999999999999999999999875432   222211  1         5788999999999 887764

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.38  E-value=3.5e-12  Score=76.96  Aligned_cols=66  Identities=36%  Similarity=0.380  Sum_probs=55.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      |+++|||++++||++++++|+++|++|++++|+.+..+.+...+.  +..         +.++.+|+++.++ .+++.
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~---------~~~~~~D~~~~~~v~~~~~   68 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGN---------AWTGALDVTDRAAWDAALA   68 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCc---------eEEEEecCCCHHHHHHHHH
Confidence            589999999999999999999999999999999876666554442  122         8899999999998 87765

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.38  E-value=4.1e-12  Score=76.37  Aligned_cols=70  Identities=41%  Similarity=0.550  Sum_probs=54.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +++++|||++++||.+++++|+++|++|++++|+... ......+.  ..         .+.++.+|++++++ ++
T Consensus        12 ~~~-~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~---------~~~~~~~Dl~~~~~~~~   78 (255)
T PRK06841         12 DLS-GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GG---------NAKGLVCDVSDSQSVEA   78 (255)
T ss_pred             CCC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CC---------ceEEEEecCCCHHHHHH
Confidence            456 8999999999999999999999999999999998653 22222221  11         26789999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        79 ~~~~   82 (255)
T PRK06841         79 AVAA   82 (255)
T ss_pred             HHHH
Confidence            7754

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.38  E-value=5.7e-12  Score=75.50  Aligned_cols=70  Identities=26%  Similarity=0.299  Sum_probs=55.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .|+++|||+++|||..++++|+++|++|+++. ++++..+....++.....+         +.++.+|++++++ .++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~~~   72 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGR---------ACVVAGDVANEADVIAMFD   72 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---------EEEEEeccCCHHHHHHHHH
Confidence            46899999999999999999999999988765 5555566666666443333         8899999999999 88775


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        73 ~   73 (248)
T PRK06947         73 A   73 (248)
T ss_pred             H
Confidence            4

>PRK06182 short chain dehydrogenase; Validated

Probab=99.37  E-value=3.1e-12  Score=77.76  Aligned_cols=64  Identities=30%  Similarity=0.275  Sum_probs=53.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||+++|||++++++|+++|++|++++|+.++++....      ..         +.++.+|++|+++ ++++++
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~------~~---------~~~~~~Dv~~~~~~~~~~~~   67 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS------LG---------VHPLSLDVTDEASIKAAVDT   67 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh------CC---------CeEEEeeCCCHHHHHHHHHH
Confidence            7899999999999999999999999999999998765543321      12         7789999999999 888763

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.37  E-value=2.5e-12  Score=77.81  Aligned_cols=65  Identities=29%  Similarity=0.447  Sum_probs=54.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++++......         ..         +.++.+|++++++ +
T Consensus         5 ~~l~-~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---------~~---------~~~~~~D~~~~~~~~   65 (266)
T PRK06171          5 LNLQ-GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---------EN---------YQFVPTDVSSAEEVN   65 (266)
T ss_pred             ccCC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---------Cc---------eEEEEccCCCHHHHH
Confidence            4567 8999999999999999999999999999999988754321         12         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        66 ~~~~~   70 (266)
T PRK06171         66 HTVAE   70 (266)
T ss_pred             HHHHH
Confidence            87764

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.37  E-value=6.9e-12  Score=75.40  Aligned_cols=69  Identities=25%  Similarity=0.219  Sum_probs=56.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +++++|||++++||++++++|+.+|++|++++|+++..+.+.+.....+..         +.++.+|++|+++ .+++.
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~   71 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLA---------LRVEKLDLTDAIDRAQAAE   71 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------ceEEEeeCCCHHHHHHHhc
Confidence            578999999999999999999999999999999877666555544433333         8899999999998 77643

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.37  E-value=5.9e-12  Score=76.05  Aligned_cols=72  Identities=22%  Similarity=0.239  Sum_probs=53.5

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCc-----------cchHHHHHHHHHHhhhccCCCCCCceEEE
Q 034737            3 LKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSE-----------EKGNEVAALVEKENAKFHSNLGFPSAMFI   69 (85)
Q Consensus         3 l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   69 (85)
                      |. +|+++|||++  +|||++++++|+++|++|+++++..           .......+++...+.         ++.++
T Consensus         4 l~-~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---------~~~~~   73 (256)
T PRK12859          4 LK-NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGV---------KVSSM   73 (256)
T ss_pred             cC-CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCC---------eEEEE
Confidence            56 8999999998  4999999999999999998876431           112223333332222         38899


Q ss_pred             EecCCCHHH-HHHhhh
Q 034737           70 RCDVTNTKF-ALAFLR   84 (85)
Q Consensus        70 ~~Dv~~~~~-~~~~~~   84 (85)
                      ++|+++.++ .+++++
T Consensus        74 ~~D~~~~~~i~~~~~~   89 (256)
T PRK12859         74 ELDLTQNDAPKELLNK   89 (256)
T ss_pred             EcCCCCHHHHHHHHHH
Confidence            999999999 888764

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.37  E-value=5.4e-12  Score=76.05  Aligned_cols=70  Identities=40%  Similarity=0.471  Sum_probs=56.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      ++ +++++|||++++||++++++|+++|++|++++|+.+..+...+.....  .         +.++.+|++++++ ..+
T Consensus         9 ~~-~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~---------~~~~~~D~~~~~~~~~~   76 (264)
T PRK12829          9 LD-GLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--K---------VTATVADVADPAQVERV   76 (264)
T ss_pred             cC-CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--c---------eEEEEccCCCHHHHHHH
Confidence            45 899999999999999999999999999999999876555544333211  2         7899999999998 877


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        77 ~~~   79 (264)
T PRK12829         77 FDT   79 (264)
T ss_pred             HHH
Confidence            653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.37  E-value=8.5e-12  Score=74.76  Aligned_cols=74  Identities=28%  Similarity=0.360  Sum_probs=56.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |++. +++++|||++++||++++++|+.+|+++++..++ .+........+...+..         +.++.+|++++++ 
T Consensus         2 ~~~~-~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~   71 (252)
T PRK06077          2 YSLK-DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGE---------GIGVLADVSTREGC   71 (252)
T ss_pred             CCCC-CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCe---------eEEEEeccCCHHHH
Confidence            4567 8999999999999999999999999998877654 33344444444433323         7789999999998 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      .++++.
T Consensus        72 ~~~~~~   77 (252)
T PRK06077         72 ETLAKA   77 (252)
T ss_pred             HHHHHH
Confidence            877653

>PRK06484 short chain dehydrogenase; Validated

Probab=99.37  E-value=4.2e-12  Score=83.09  Aligned_cols=67  Identities=27%  Similarity=0.419  Sum_probs=56.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+++.++.+.+++   +..         +..+.+|++|+++ ++++++
T Consensus       269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~~~~~~  336 (520)
T PRK06484        269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDE---------HLSVQADITDEAAVESAFAQ  336 (520)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc---------eeEEEccCCCHHHHHHHHHH
Confidence            899999999999999999999999999999999987666655433   122         6789999999999 888764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.37  E-value=7.1e-12  Score=74.75  Aligned_cols=71  Identities=23%  Similarity=0.335  Sum_probs=57.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+++ +++++|||++++||++++++|+++|+.|++.+++.+..+.....+   +..         +.++.+|+++.++ +
T Consensus         2 ~~~~-~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~   68 (245)
T PRK12936          2 FDLS-GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GER---------VKIFPANLSDRDEVK   68 (245)
T ss_pred             cCCC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCc---------eEEEEccCCCHHHHH
Confidence            3466 899999999999999999999999999988888876655544332   122         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        69 ~~~~~   73 (245)
T PRK12936         69 ALGQK   73 (245)
T ss_pred             HHHHH
Confidence            87653

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.37  E-value=5.8e-12  Score=85.09  Aligned_cols=74  Identities=38%  Similarity=0.500  Sum_probs=60.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+.+..+.....+......       ..+.++.+|++|+++ .++
T Consensus       412 l~-gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~-------~~~~~v~~Dvtd~~~v~~a  483 (676)
T TIGR02632       412 LA-RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGA-------GRAVALKMDVTDEQAVKAA  483 (676)
T ss_pred             CC-CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCC-------CcEEEEECCCCCHHHHHHH
Confidence            45 899999999999999999999999999999999987777666666533221       127789999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus       484 ~~~  486 (676)
T TIGR02632       484 FAD  486 (676)
T ss_pred             HHH
Confidence            764

>PRK08264 short chain dehydrogenase; Validated

Probab=99.37  E-value=5.3e-12  Score=75.22  Aligned_cols=67  Identities=30%  Similarity=0.372  Sum_probs=55.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |++. +++++|||++++||++++++|+++|+ +|++++|+.++.+.       .+..         +.++.+|++++++ 
T Consensus         2 ~~~~-~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~---------~~~~~~D~~~~~~~   64 (238)
T PRK08264          2 MDIK-GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPR---------VVPLQLDVTDPASV   64 (238)
T ss_pred             CCCC-CCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCc---------eEEEEecCCCHHHH
Confidence            4566 89999999999999999999999999 99999998765433       1122         8899999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      .++++.
T Consensus        65 ~~~~~~   70 (238)
T PRK08264         65 AAAAEA   70 (238)
T ss_pred             HHHHHh
Confidence            887653

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.37  E-value=6.1e-12  Score=76.32  Aligned_cols=71  Identities=17%  Similarity=0.244  Sum_probs=51.7

Q ss_pred             CCCCcEEEEecC--CChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGG--ASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |. +|+++|||+  ++|||++++++|++.|++|+++++.....+. .+++......         ..++.+|++|+++ +
T Consensus         4 l~-~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~Dv~d~~~v~   72 (260)
T PRK06997          4 LA-GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGS---------DLVFPCDVASDEQID   72 (260)
T ss_pred             cC-CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHH-HHHHHHhcCC---------cceeeccCCCHHHHH
Confidence            45 899999996  6799999999999999999988765321222 2222222111         3468999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        73 ~~~~~   77 (260)
T PRK06997         73 ALFAS   77 (260)
T ss_pred             HHHHH
Confidence            88764

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.37  E-value=4.4e-12  Score=77.44  Aligned_cols=64  Identities=25%  Similarity=0.189  Sum_probs=53.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||+++|||++++++|+++|++|++++|+++.++.+..      ..         +.++.+|++|.++ +++++.
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~------~~---------~~~~~~Dl~d~~~~~~~~~~   68 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA------EG---------LEAFQLDYAEPESIAALVAQ   68 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH------CC---------ceEEEccCCCHHHHHHHHHH
Confidence            6899999999999999999999999999999999766544321      12         6789999999998 887754

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.36  E-value=4.4e-12  Score=77.23  Aligned_cols=67  Identities=22%  Similarity=0.213  Sum_probs=55.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||++++||++++++|+++|++|++++|+.+.++...+.+   +..         +.++++|++++++ .++++.
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~~~~~~   70 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDR---------LLPLALDVTDRAAVFAAVET   70 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCC---------eeEEEccCCCHHHHHHHHHH
Confidence            789999999999999999999999999999999877655543322   112         7889999999999 887653

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.36  E-value=7e-12  Score=75.49  Aligned_cols=68  Identities=29%  Similarity=0.404  Sum_probs=56.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||++++||++++++|+++|++|++++|+.+..+...+.+.  ...         +.++.+|+.++++ .+++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~---------~~~~~~D~~~~~~~~~~~~~   70 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DAR---------FVPVACDLTDAASLAAALAN   70 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCc---------eEEEEecCCCHHHHHHHHHH
Confidence            6799999999999999999999999999999998876666555442  112         7899999999998 877653

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.36  E-value=4.1e-12  Score=77.53  Aligned_cols=67  Identities=28%  Similarity=0.215  Sum_probs=54.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||+++|||++++++|+++|++|++++|+++..+.+...   .+.         ++.++.+|++|+++ .++++.
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~---------~~~~~~~D~~d~~~~~~~~~~   71 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPD---------RALARLLDVTDFDAIDAVVAD   71 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCC---------CeeEEEccCCCHHHHHHHHHH
Confidence            68999999999999999999999999999999987655443321   111         27889999999999 887653

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.36  E-value=9.3e-12  Score=74.14  Aligned_cols=69  Identities=26%  Similarity=0.228  Sum_probs=53.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      |+++|||++++||++++++|+++|++|+++.| +++..+.....+...+..         +.++.+|++++++ .+++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~~   71 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFD---------FRVVEGDVSSFESCKAAVAK   71 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCc---------eEEEEecCCCHHHHHHHHHH
Confidence            58999999999999999999999999998888 444444444444322222         8899999999998 887754

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.36  E-value=7.8e-12  Score=74.67  Aligned_cols=72  Identities=25%  Similarity=0.326  Sum_probs=56.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC--HHH-H
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN--TKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~-~   79 (85)
                      |. +++++|||+++|||++++++|+++|++|++++|+++..+...+++.....        +.+.++.+|+++  .++ .
T Consensus         4 l~-~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--------~~~~~~~~D~~~~~~~~~~   74 (239)
T PRK08703          4 LS-DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGH--------PEPFAIRFDLMSAEEKEFE   74 (239)
T ss_pred             CC-CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCC--------CCcceEEeeecccchHHHH
Confidence            45 89999999999999999999999999999999999877777666654322        126788999976  344 5


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus        75 ~~~~   78 (239)
T PRK08703         75 QFAA   78 (239)
T ss_pred             HHHH
Confidence            5443

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.35  E-value=1.1e-11  Score=74.09  Aligned_cols=72  Identities=32%  Similarity=0.465  Sum_probs=55.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc----cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE----EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      +. +++++|||++++||+++++.|+.+|++|+++++..    +..+....++...+..         +.++.+|++++++
T Consensus         4 ~~-~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~   73 (249)
T PRK12827          4 LD-SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGK---------ALGLAFDVRDFAA   73 (249)
T ss_pred             cC-CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHH
Confidence            45 78999999999999999999999999999877643    3333333344332222         8899999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       +++++.
T Consensus        74 ~~~~~~~   80 (249)
T PRK12827         74 TRAALDA   80 (249)
T ss_pred             HHHHHHH
Confidence             887653

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.34  E-value=8.8e-12  Score=74.76  Aligned_cols=65  Identities=31%  Similarity=0.397  Sum_probs=53.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||++++||..++++|+++|++|++++++.         +......         +.++++|++++++ +
T Consensus         4 ~~~~-~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~---------~~~~~~D~~~~~~~~   64 (252)
T PRK08220          4 MDFS-GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYP---------FATFVLDVSDAAAVA   64 (252)
T ss_pred             cCCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCc---------eEEEEecCCCHHHHH
Confidence            4566 89999999999999999999999999999999876         1111222         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        65 ~~~~~   69 (252)
T PRK08220         65 QVCQR   69 (252)
T ss_pred             HHHHH
Confidence            87754

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.34  E-value=9.4e-12  Score=74.78  Aligned_cols=66  Identities=18%  Similarity=0.262  Sum_probs=54.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++++|||++++||.++++.|+.+|++|++++|+++.++.....+   +..         +.++.+|+++.++ .+++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dl~~~~~i~~~~~~   67 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDN---------LYIAQLDVRNRAAIEEMLAS   67 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccc---------eEEEEecCCCHHHHHHHHHH
Confidence            36899999999999999999999999999999987655544333   122         7889999999999 887653

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.33  E-value=1.1e-11  Score=73.99  Aligned_cols=69  Identities=33%  Similarity=0.499  Sum_probs=55.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++++|||++++||.+++++|+++|++|+++ .|+++..+....++...+..         +.++++|++|+++ ++++++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~d~~~i~~~~~~   72 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGK---------AFVLQADISDENQVVAMFTA   72 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCe---------EEEEEccCCCHHHHHHHHHH
Confidence            589999999999999999999999998775 56666666666655543333         7889999999999 888764

>PLN00015 protochlorophyllide reductase

Probab=99.33  E-value=4.8e-12  Score=78.45  Aligned_cols=66  Identities=23%  Similarity=0.187  Sum_probs=54.5

Q ss_pred             EEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737           10 FVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus        10 litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|||+++|||++++++|+++| ++|++++|+.+..+....++.....         ++.++.+|++|.++ ++++++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~---------~~~~~~~Dl~d~~~v~~~~~~   68 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKD---------SYTVMHLDLASLDSVRQFVDN   68 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCC---------eEEEEEecCCCHHHHHHHHHH
Confidence            589999999999999999999 9999999998777666665532222         27889999999999 888764

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.33  E-value=6.1e-12  Score=75.47  Aligned_cols=66  Identities=23%  Similarity=0.334  Sum_probs=51.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      |+++|||+++|||++++++|+++|++|++++|++. .++...+   ...         .++.++.+|++++++ ++++++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~---------~~~~~~~~D~~~~~~~~~~~~~   69 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYN---------SNLTFHSLDLQDVHELETNFNE   69 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---ccC---------CceEEEEecCCCHHHHHHHHHH
Confidence            58999999999999999999999999999999863 2222211   111         228899999999999 887754

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.33  E-value=1.6e-11  Score=73.31  Aligned_cols=67  Identities=31%  Similarity=0.393  Sum_probs=54.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +++++|||++++||.++++.|+++|++|++++|+.+..+...+..     .         ..++.+|++++++ .+
T Consensus         6 ~~~-~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~---------~~~~~~D~~~~~~v~~   70 (245)
T PRK07060          6 DFS-GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----G---------CEPLRLDVGDDAAIRA   70 (245)
T ss_pred             ccC-CCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----C---------CeEEEecCCCHHHHHH
Confidence            455 899999999999999999999999999999999876554433222     1         5678899999988 77


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus        71 ~~~   73 (245)
T PRK07060         71 ALA   73 (245)
T ss_pred             HHH
Confidence            765

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.33  E-value=9.4e-12  Score=75.73  Aligned_cols=67  Identities=22%  Similarity=0.309  Sum_probs=54.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      .|+++|||++++||++++++|+++|++|++++|+++..+.+....   ...         +.++.+|++|+++ .+++++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~~~~~~   69 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDR---------LWVLQLDVTDSAAVRAVVDR   69 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCc---------eEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999876555443322   112         7899999999999 877653

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.33  E-value=4.9e-12  Score=76.69  Aligned_cols=62  Identities=29%  Similarity=0.305  Sum_probs=52.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||++++||++++++|+++|++|++++|+.+..+..        ..         +.++++|++|+++ +++++.
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--------~~---------~~~~~~D~~d~~~~~~~~~~   66 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--------PG---------VELLELDVTDDASVQAAVDE   66 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--------CC---------CeeEEeecCCHHHHHHHHHH
Confidence            68999999999999999999999999999999986543211        12         7889999999999 888764

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.32  E-value=9.5e-12  Score=75.02  Aligned_cols=64  Identities=31%  Similarity=0.339  Sum_probs=52.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||+++|||.+++++|+++|++|++++|+.+..         ....         +.++.+|++|+++ ++
T Consensus         6 ~~~-~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~---------~~~~~~D~~~~~~~~~   66 (260)
T PRK06523          6 ELA-GKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEG---------VEFVAADLTTAEGCAA   66 (260)
T ss_pred             CCC-CCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCc---------eeEEecCCCCHHHHHH
Confidence            356 89999999999999999999999999999999986421         0112         7889999999998 87


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        67 ~~~~   70 (260)
T PRK06523         67 VARA   70 (260)
T ss_pred             HHHH
Confidence            7653

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.32  E-value=1.2e-11  Score=73.64  Aligned_cols=63  Identities=25%  Similarity=0.289  Sum_probs=52.6

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      .++|||+++|||+++++.|+++|++|++++|+.++++...+++     .         +.++++|++++++ +++++.
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~---------~~~~~~D~~~~~~v~~~~~~   65 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----D---------VDAIVCDNTDPASLEEARGL   65 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----c---------CcEEecCCCCHHHHHHHHHH
Confidence            4899999999999999999999999999999887665554433     1         5678999999999 887753

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.30  E-value=2.4e-11  Score=72.83  Aligned_cols=70  Identities=27%  Similarity=0.321  Sum_probs=55.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCC--CHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVT--NTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~-~~~~   82 (85)
                      +|+++|||++++||..++++|++.|++|++++|+.+..+...+++.....        .++.++.+|++  ++++ .+++
T Consensus        12 ~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~--------~~~~~~~~d~~~~~~~~~~~~~   83 (247)
T PRK08945         12 DRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGG--------PQPAIIPLDLLTATPQNYQQLA   83 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCC--------CCceEEEecccCCCHHHHHHHH
Confidence            89999999999999999999999999999999998777776666654321        12667778886  5666 6554


Q ss_pred             h
Q 034737           83 L   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus        84 ~   84 (247)
T PRK08945         84 D   84 (247)
T ss_pred             H
Confidence            4

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.30  E-value=1.9e-11  Score=72.92  Aligned_cols=67  Identities=25%  Similarity=0.372  Sum_probs=54.0

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++|||+++|||.+++++|+++|++|+++++. .+..+...+.+...+..         +.++.+|++++++ .+++++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~~~~~~~~   69 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGN---------ARLLQFDVADRVACRTLLEA   69 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCe---------EEEEEccCCCHHHHHHHHHH
Confidence            5899999999999999999999999888865 34455565566544333         8899999999999 887654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.30  E-value=5.5e-11  Score=78.87  Aligned_cols=79  Identities=16%  Similarity=0.176  Sum_probs=58.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .+++++|||++++||++++++|+++|++|++++|+.++++.+...+..............++.++.+|+++.++ .+.+.
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg  158 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG  158 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc
Confidence            48999999999999999999999999999999999887776665553211000000011238899999999988 77654

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.29  E-value=5.6e-11  Score=71.29  Aligned_cols=75  Identities=35%  Similarity=0.461  Sum_probs=55.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc--hHHHHHHHHHHhhhccCCCCCCceEEEEecCCC-HH
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK--GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN-TK   77 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~-~~   77 (85)
                      |.+. +++++|||+++|||+++++.|+.+|++|+++.++.+.  .+....... ....       ..+.+..+|+++ .+
T Consensus         1 ~~~~-~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~Dvs~~~~   71 (251)
T COG1028           1 MDLS-GKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGG-------GRAAAVAADVSDDEE   71 (251)
T ss_pred             CCCC-CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCC-------CcEEEEEecCCCCHH
Confidence            4567 8999999999999999999999999998888877654  233332222 1100       127888999998 88


Q ss_pred             H-HHHhhh
Q 034737           78 F-ALAFLR   84 (85)
Q Consensus        78 ~-~~~~~~   84 (85)
                      + +.+++.
T Consensus        72 ~v~~~~~~   79 (251)
T COG1028          72 SVEALVAA   79 (251)
T ss_pred             HHHHHHHH
Confidence            8 877764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.29  E-value=3.7e-11  Score=71.97  Aligned_cols=69  Identities=28%  Similarity=0.380  Sum_probs=54.0

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++|||++++||++++++|+++|++|++++|+ .+.++...+.+......       ..+.++.+|++++++ .+++++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~   72 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGE-------GVAFAAVQDVTDEAQWQALLAQ   72 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCC-------ceEEEEEeecCCHHHHHHHHHH
Confidence            7999999999999999999999999999998 55566665555432211       115568999999999 887764

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.28  E-value=2.5e-11  Score=72.01  Aligned_cols=64  Identities=19%  Similarity=0.256  Sum_probs=52.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++++|||++++||.+++++|+++|++|++++|++...+.... +    ..         +.++.+|++|+++ +++++.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~----~~---------~~~~~~D~~d~~~~~~~~~~   66 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L----PG---------VHIEKLDMNDPASLDQLLQR   66 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c----cc---------cceEEcCCCCHHHHHHHHHH
Confidence            589999999999999999999999999999999876543321 1    12         6788999999999 888764

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.28  E-value=4.6e-11  Score=71.11  Aligned_cols=70  Identities=37%  Similarity=0.451  Sum_probs=54.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++++|||++++||.+++++|+.+|++|+++.++.. ..+.....+...+..         +.++.+|++++++ .++++
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~v~~~~~   76 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRR---------AQAVQADVTDKAALEAAVA   76 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCc---------eEEEECCcCCHHHHHHHHH
Confidence            789999999999999999999999999888766554 333444444433333         8899999999999 88765


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        77 ~   77 (249)
T PRK12825         77 A   77 (249)
T ss_pred             H
Confidence            3

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.28  E-value=2.1e-11  Score=75.80  Aligned_cols=49  Identities=29%  Similarity=0.378  Sum_probs=42.8

Q ss_pred             CCCCCCcEEEEecC--CChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHH
Q 034737            1 MELKPGLSAFVTGG--ASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         1 ~~l~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      |+|. ||+++|||+  ++|||+++++.|++.|++|++ .|+.+.++.....+.
T Consensus         5 ~~l~-gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~   55 (303)
T PLN02730          5 IDLR-GKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLR   55 (303)
T ss_pred             cCCC-CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhh
Confidence            5677 999999999  799999999999999999988 788777777776664

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.28  E-value=3.2e-11  Score=73.22  Aligned_cols=64  Identities=27%  Similarity=0.325  Sum_probs=49.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      ++++|||+++|||++++++|+++|++|+++++. .+.++...+++.....        .++.++.+|++|.++
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~Dv~d~~~   66 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRP--------NSAVTCQADLSNSAT   66 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccC--------CceEEEEccCCCchh
Confidence            589999999999999999999999999988654 4556655555543211        126779999999875

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08324 short chain dehydrogenase; Validated

Probab=99.27  E-value=3.6e-11  Score=81.34  Aligned_cols=69  Identities=39%  Similarity=0.548  Sum_probs=58.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||++++||++++++|+.+|++|++++|+.+..+.....+... ..         +.++.+|++++++ .+++++
T Consensus       422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~---------v~~v~~Dvtd~~~v~~~~~~  491 (681)
T PRK08324        422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DR---------ALGVACDVTDEAAVQAAFEE  491 (681)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-Cc---------EEEEEecCCCHHHHHHHHHH
Confidence            799999999999999999999999999999999987776666555432 22         8899999999998 887653

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.27  E-value=3.2e-11  Score=75.19  Aligned_cols=70  Identities=19%  Similarity=0.153  Sum_probs=56.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH--HHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV--AALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      ++.++|||++|.||..++++|+.+||.|..+.|+++..+..  ...+.....         ++..+..|+.|+++ ..++
T Consensus         6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~---------~l~l~~aDL~d~~sf~~ai   76 (327)
T KOG1502|consen    6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKE---------RLKLFKADLLDEGSFDKAI   76 (327)
T ss_pred             CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcc---------cceEEeccccccchHHHHH
Confidence            78999999999999999999999999999999998764332  223332222         38999999999999 8887


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      +.
T Consensus        77 ~g   78 (327)
T KOG1502|consen   77 DG   78 (327)
T ss_pred             hC
Confidence            64

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.26  E-value=2.9e-11  Score=73.59  Aligned_cols=63  Identities=30%  Similarity=0.265  Sum_probs=51.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      |+++|||+++|||++++++|+++|++|++++|+.+..+....      ..         +.++.+|+++.++ +++++.
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~------~~---------~~~~~~Dl~~~~~~~~~~~~   65 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA------AG---------FTAVQLDVNDGAALARLAEE   65 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH------CC---------CeEEEeeCCCHHHHHHHHHH
Confidence            589999999999999999999999999999998765443211      12         6788999999998 887653

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.26  E-value=3.9e-11  Score=71.15  Aligned_cols=65  Identities=31%  Similarity=0.376  Sum_probs=53.3

Q ss_pred             EEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737           10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus        10 litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|||++++||++++++|+++|++|++++|+.+..+.....+.. +..         +.++.+|++++++ .+++++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~---------~~~~~~Dl~~~~~~~~~~~~   66 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAP---------VRTAALDITDEAAVDAFFAE   66 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCc---------eEEEEccCCCHHHHHHHHHh
Confidence            5899999999999999999999999999997766655554431 222         7889999999999 888764

>PRK12742 oxidoreductase; Provisional

Probab=99.26  E-value=6.3e-11  Score=70.49  Aligned_cols=66  Identities=20%  Similarity=0.277  Sum_probs=50.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      |. +|+++|||+++|||++++++|+.+|++|+++++. .+..+.+...+     .         +.++.+|++|.++ .+
T Consensus         4 ~~-~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~---------~~~~~~D~~~~~~~~~   68 (237)
T PRK12742          4 FT-GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----G---------ATAVQTDSADRDAVID   68 (237)
T ss_pred             CC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----C---------CeEEecCCCCHHHHHH
Confidence            56 8999999999999999999999999999887664 33333332211     1         5678899999888 77


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus        69 ~~~   71 (237)
T PRK12742         69 VVR   71 (237)
T ss_pred             HHH
Confidence            654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.25  E-value=9.1e-11  Score=73.71  Aligned_cols=69  Identities=23%  Similarity=0.113  Sum_probs=54.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|.++|||++++||.++++.|+++|++|++++|+..........+. ....         +.++.+|+++.++ .++++.
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~---------~~~~~~Dl~~~~~~~~~~~~   73 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKK---------IEDHFGDIRDAAKLRKAIAE   73 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCC---------ceEEEccCCCHHHHHHHHhh
Confidence            7899999999999999999999999999999988765443333222 1112         7789999999998 887753

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.25  E-value=6.6e-11  Score=70.59  Aligned_cols=70  Identities=26%  Similarity=0.193  Sum_probs=52.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .|+++|||++++||++++++|+++|++|++++|+.. ........+...         ..++.++.+|++++++ .++++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~v~~~~~   72 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFT---------EDQVRLKELDVTDTEECAEALA   72 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhcc---------CCeEEEEEcCCCCHHHHHHHHH
Confidence            368999999999999999999999999999999864 122221211111         1238899999999998 88765


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      .
T Consensus        73 ~   73 (245)
T PRK12824         73 E   73 (245)
T ss_pred             H
Confidence            4

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.24  E-value=9.7e-11  Score=72.78  Aligned_cols=71  Identities=17%  Similarity=0.152  Sum_probs=54.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||++++||++++++|+.+|++|+++.|+....+.....+.....       .+++.++.+|++++++ .++++
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~   76 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGA-------KERLKLFKADLLDEGSFELAID   76 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCC-------CCceEEEeCCCCCchHHHHHHc
Confidence            78999999999999999999999999999888887654433222211110       1238889999999998 87765

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.24  E-value=6.2e-11  Score=76.20  Aligned_cols=69  Identities=23%  Similarity=0.247  Sum_probs=53.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +++ +|+++|||+++|||++++++|+++|++|++++|++++.+..   .......         +..+.+|++|+++ .+
T Consensus       175 sl~-gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~~~~---------v~~v~~Dvsd~~~v~~  241 (406)
T PRK07424        175 SLK-GKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGEDLP---------VKTLHWQVGQEAALAE  241 (406)
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HhhcCCC---------eEEEEeeCCCHHHHHH
Confidence            456 89999999999999999999999999999999887544321   1111111         6688999999988 76


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      .+.
T Consensus       242 ~l~  244 (406)
T PRK07424        242 LLE  244 (406)
T ss_pred             HhC
Confidence            654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.24  E-value=1.2e-10  Score=72.40  Aligned_cols=75  Identities=17%  Similarity=0.106  Sum_probs=56.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |... +++++|||++++||.+++++|+++|++|+++.|+....+...........       ...+.++.+|++++++ .
T Consensus         1 ~~~~-~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~   72 (322)
T PLN02986          1 MNGG-GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGA-------KERLKLFKADLLEESSFE   72 (322)
T ss_pred             CCCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCC-------CCceEEEecCCCCcchHH
Confidence            4445 89999999999999999999999999999888887654443322211110       1238889999999988 8


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus        73 ~~~~   76 (322)
T PLN02986         73 QAIE   76 (322)
T ss_pred             HHHh
Confidence            7765

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.23  E-value=2.6e-10  Score=66.16  Aligned_cols=69  Identities=28%  Similarity=0.501  Sum_probs=54.2

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc---cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE---EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      +++|||+.+|||..+++.|+.++. +++++.|+.   .......+++...+..         +.++.+|++|+++ .+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~---------v~~~~~Dv~d~~~v~~~~   72 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGAR---------VEYVQCDVTDPEAVAAAL   72 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-E---------EEEEE--TTSHHHHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCc---------eeeeccCccCHHHHHHHH
Confidence            689999999999999999999975 789999883   2455667777766555         9999999999999 9988


Q ss_pred             hhC
Q 034737           83 LRL   85 (85)
Q Consensus        83 ~~~   85 (85)
                      +.+
T Consensus        73 ~~~   75 (181)
T PF08659_consen   73 AQL   75 (181)
T ss_dssp             HTS
T ss_pred             HHH
Confidence            653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.22  E-value=1.1e-10  Score=69.36  Aligned_cols=67  Identities=34%  Similarity=0.460  Sum_probs=52.6

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++|||++++||.+++++|+++|++|++++|+. +..+.....+...+..         +.++.+|++|+++ +++++.
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~~   69 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVK---------ALGVVCDVSDREDVKAVVEE   69 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCc---------eEEEEecCCCHHHHHHHHHH
Confidence            58999999999999999999999999998875 4444444444433322         7899999999998 887653

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.21  E-value=1.2e-10  Score=71.93  Aligned_cols=69  Identities=14%  Similarity=0.008  Sum_probs=51.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc--hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK--GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      +++++|||++++||++++++|+++|++|+++.|+...  .......+....         .++.++.+|++|.++ .+++
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~---------~~~~~~~~Dl~d~~~~~~~l   76 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEE---------ERLKVFDVDPLDYHSILDAL   76 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCC---------CceEEEEecCCCHHHHHHHH
Confidence            7899999999999999999999999999999886432  111112221111         237889999999988 7665


Q ss_pred             h
Q 034737           83 L   83 (85)
Q Consensus        83 ~   83 (85)
                      .
T Consensus        77 ~   77 (297)
T PLN02583         77 K   77 (297)
T ss_pred             c
Confidence            4

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.21  E-value=1.2e-10  Score=72.75  Aligned_cols=69  Identities=22%  Similarity=0.246  Sum_probs=53.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+ +|+++|||++++||++++++|+.+|  +.|++++|+......+...+.  .         +.+.++.+|++|++. .
T Consensus         2 ~~-~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~---------~~~~~v~~Dl~d~~~l~   69 (324)
T TIGR03589         2 FN-NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--A---------PCLRFFIGDVRDKERLT   69 (324)
T ss_pred             cC-CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--C---------CcEEEEEccCCCHHHHH
Confidence            45 8999999999999999999999986  689888887654333222221  1         128899999999998 8


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      +++.
T Consensus        70 ~~~~   73 (324)
T TIGR03589        70 RALR   73 (324)
T ss_pred             HHHh
Confidence            7765

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02240 UDP-glucose 4-epimerase

Probab=99.20  E-value=3.4e-10  Score=70.94  Aligned_cols=77  Identities=27%  Similarity=0.290  Sum_probs=55.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. ++.++|||++++||.+++++|+.+|++|+++++...........+.....     .....+.++.+|++++++ .
T Consensus         1 ~~~~-~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~l~   74 (352)
T PLN02240          1 MSLM-GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAG-----DLGDNLVFHKVDLRDKEALE   74 (352)
T ss_pred             CCCC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhc-----ccCccceEEecCcCCHHHHH
Confidence            7788 89999999999999999999999999999998754332222222211110     001237889999999998 8


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus        75 ~~~~   78 (352)
T PLN02240         75 KVFA   78 (352)
T ss_pred             HHHH
Confidence            7764

>PLN02650 dihydroflavonol-4-reductase

Probab=99.20  E-value=2.2e-10  Score=72.01  Aligned_cols=75  Identities=20%  Similarity=0.157  Sum_probs=55.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |-.+ .+.++|||++++||.+++++|+.+|++|++++|+.+........+...+.       ..++.++.+|+++++. .
T Consensus         1 ~~~~-~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~v~~Dl~d~~~~~   72 (351)
T PLN02650          1 MGSQ-KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGA-------TTRLTLWKADLAVEGSFD   72 (351)
T ss_pred             CCCC-CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCC-------CCceEEEEecCCChhhHH
Confidence            3445 78999999999999999999999999999999887655444322211110       1137889999999988 7


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus        73 ~~~~   76 (351)
T PLN02650         73 DAIR   76 (351)
T ss_pred             HHHh
Confidence            7664

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.19  E-value=1e-10  Score=67.71  Aligned_cols=66  Identities=44%  Similarity=0.615  Sum_probs=59.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +.++++||+++|+|++.+++|+++|+.+++.|...++.+...+++..   +         +.|...|+++.++ +.++.
T Consensus         9 glvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~---~---------~vf~padvtsekdv~aala   75 (260)
T KOG1199|consen    9 GLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGG---K---------VVFTPADVTSEKDVRAALA   75 (260)
T ss_pred             CeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCC---c---------eEEeccccCcHHHHHHHHH
Confidence            78999999999999999999999999999999999888888887742   2         8999999999998 77764

>PRK08017 oxidoreductase; Provisional

Probab=99.19  E-value=1.5e-10  Score=69.58  Aligned_cols=64  Identities=22%  Similarity=0.166  Sum_probs=51.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      .++++|||++++||.+++++|+++|++|++++|+.++.+....      ..         +.++.+|+++.++ .++++.
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~------~~---------~~~~~~D~~~~~~~~~~~~~   66 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS------LG---------FTGILLDLDDPESVERAADE   66 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh------CC---------CeEEEeecCCHHHHHHHHHH
Confidence            3689999999999999999999999999999998765443321      12         6788999999988 776653

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.18  E-value=1.9e-10  Score=68.88  Aligned_cols=63  Identities=24%  Similarity=0.276  Sum_probs=49.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++++|||+++|||++++++|+++|++|++++|+....  .   .....         .++.++.+|+++.++ ++++.
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~---------~~~~~~~~D~~~~~~~~~~~~   65 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAG---------ERLAEVELDLSDAAAAAAWLA   65 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccC---------CeEEEEEeccCCHHHHHHHHH
Confidence            3699999999999999999999999999999886431  1   11111         238899999999999 87554

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.18  E-value=1.9e-10  Score=68.09  Aligned_cols=62  Identities=19%  Similarity=0.175  Sum_probs=50.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++++|||++++||++++++|+++|++|++++|+.+..+.+..      ..         +.++.+|+++.++ +++++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~------~~---------~~~~~~D~~~~~~v~~~~~   64 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA------LG---------AEALALDVADPASVAGLAW   64 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh------cc---------ceEEEecCCCHHHHHHHHH
Confidence            579999999999999999999999999999998765443321      12         5688999999998 87654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.17  E-value=2.5e-10  Score=71.80  Aligned_cols=68  Identities=19%  Similarity=0.103  Sum_probs=53.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +++++|||++++||.+++++|+.+|++|++++|+..........+.. ..         .+.++.+|+++++. .+++.
T Consensus        10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~---------~~~~~~~Dl~~~~~~~~~~~   78 (353)
T PLN02896         10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GD---------RLRLFRADLQEEGSFDEAVK   78 (353)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CC---------eEEEEECCCCCHHHHHHHHc
Confidence            67899999999999999999999999999998886554443333221 12         28889999999988 77764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.17  E-value=1.6e-10  Score=69.81  Aligned_cols=65  Identities=20%  Similarity=0.285  Sum_probs=48.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      ++ +++++|||+++|||++++++|+++|++|++++|+......   ..  ....         ..++.+|+++.++ .+.
T Consensus        12 l~-~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~--~~~~---------~~~~~~D~~~~~~~~~~   76 (245)
T PRK12367         12 WQ-GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN--DESP---------NEWIKWECGKEESLDKQ   76 (245)
T ss_pred             hC-CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh--ccCC---------CeEEEeeCCCHHHHHHh
Confidence            45 8999999999999999999999999999999988621111   00  0011         3567899999988 665


Q ss_pred             h
Q 034737           82 F   82 (85)
Q Consensus        82 ~   82 (85)
                      +
T Consensus        77 ~   77 (245)
T PRK12367         77 L   77 (245)
T ss_pred             c
Confidence            4

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.17  E-value=2.1e-10  Score=71.00  Aligned_cols=68  Identities=26%  Similarity=0.277  Sum_probs=58.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|.++||||.+|+|+.+|++|.++|+.|+..+..++..+.+..+..  .++         +..+++|++++++ +++.+.
T Consensus        29 ~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~r---------l~t~~LDVT~~esi~~a~~~   97 (322)
T KOG1610|consen   29 DKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPR---------LRTLQLDVTKPESVKEAAQW   97 (322)
T ss_pred             CcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCc---------ceeEeeccCCHHHHHHHHHH
Confidence            7899999999999999999999999999999977777777766553  233         8889999999999 887653

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.16  E-value=3e-10  Score=70.38  Aligned_cols=71  Identities=14%  Similarity=0.103  Sum_probs=52.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++.++|||++++||.+++++|+.+|++|++++|+...............       ..+++.++.+|+++++. .++++
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~   75 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDG-------AKERLHLFKANLLEEGSFDSVVD   75 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccC-------CCCceEEEeccccCcchHHHHHc
Confidence            6899999999999999999999999999999888654332221111110       01238899999999988 77765

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.15  E-value=3.2e-10  Score=66.98  Aligned_cols=65  Identities=28%  Similarity=0.299  Sum_probs=52.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      .|+++|||++++||+++++.|+++ ++|++++|+.+..+...+..    ..         +.++++|++|+++ .+++..
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~---------~~~~~~D~~~~~~~~~~~~~   68 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PG---------ATPFPVDLTDPEAIAAAVEQ   68 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----cc---------ceEEecCCCCHHHHHHHHHh
Confidence            568999999999999999999999 99999999876544433221    22         7889999999999 887753

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.15  E-value=4.1e-10  Score=74.25  Aligned_cols=74  Identities=20%  Similarity=0.202  Sum_probs=64.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +. ||+++||||+|+||..+++++++.++ +++++++++.+......+++...+...       +.++-+|+.|.+. ..
T Consensus       248 ~~-gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~-------~~~~igdVrD~~~~~~  319 (588)
T COG1086         248 LT-GKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELK-------LRFYIGDVRDRDRVER  319 (588)
T ss_pred             cC-CCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcc-------eEEEecccccHHHHHH
Confidence            45 99999999999999999999999887 588889999999999999988755433       8999999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus       320 ~~~~  323 (588)
T COG1086         320 AMEG  323 (588)
T ss_pred             HHhc
Confidence            8764

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.15  E-value=2.3e-10  Score=71.57  Aligned_cols=76  Identities=14%  Similarity=-0.023  Sum_probs=53.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH-HHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN-EVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +. ++.++|||++++||.+++++|+.+|++|++++|...... .....+.....     .....+.++.+|++|.++ .+
T Consensus         4 ~~-~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~   77 (340)
T PLN02653          4 PP-RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPH-----PNKARMKLHYGDLSDASSLRR   77 (340)
T ss_pred             CC-CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccc-----cccCceEEEEecCCCHHHHHH
Confidence            45 789999999999999999999999999999988654211 11111110000     011238899999999998 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus        78 ~~~~   81 (340)
T PLN02653         78 WLDD   81 (340)
T ss_pred             HHHH
Confidence            7753

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.14  E-value=3.5e-10  Score=68.73  Aligned_cols=74  Identities=22%  Similarity=0.196  Sum_probs=61.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-----EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-----FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      .|+++|||+++|||.+++++|+...-     .+++.+|+-++++.....+.+.++..     --++..+..|+++..+ .
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~-----~i~~~yvlvD~sNm~Sv~   77 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKS-----TIEVTYVLVDVSNMQSVF   77 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCc-----eeEEEEEEEehhhHHHHH
Confidence            68999999999999999999998653     36777999999999999998877731     1238889999999998 7


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++..+
T Consensus        78 ~A~~d   82 (341)
T KOG1478|consen   78 RASKD   82 (341)
T ss_pred             HHHHH
Confidence            76543

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.13  E-value=3.8e-10  Score=70.73  Aligned_cols=73  Identities=15%  Similarity=0.040  Sum_probs=51.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch--HHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG--NEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      |+++|||++++||.+++++|+..|++|++++|+.+..  +.. ..+......    .....+.++.+|++|.++ .++++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~Dl~d~~~l~~~~~   75 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRI-EHIYEDPHN----VNKARMKLHYGDLTDSSNLRRIID   75 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhh-hhhhhcccc----ccccceeEEEeccCCHHHHHHHHH
Confidence            5799999999999999999999999999999876421  111 111110000    001238899999999998 88776


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      .
T Consensus        76 ~   76 (343)
T TIGR01472        76 E   76 (343)
T ss_pred             h
Confidence            3

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.13  E-value=6.5e-10  Score=64.49  Aligned_cols=67  Identities=28%  Similarity=0.314  Sum_probs=52.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++++|||++ |++..+++.|+.+|++|++++|+++..+.+...+.. ..         ++.++.+|++|+++ .++++.
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~---------~i~~~~~Dv~d~~sv~~~i~~   68 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PE---------SITPLPLDYHDDDALKLAIKS   68 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CC---------cEEEEEccCCCHHHHHHHHHH
Confidence            368999998 777789999999999999999987665555443321 11         28889999999999 888764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.12  E-value=3.9e-10  Score=72.99  Aligned_cols=65  Identities=32%  Similarity=0.360  Sum_probs=50.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc--chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE--KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      +++++|||+++|||..++++|+++|++|+++++...  .+....+++     .         ..++.+|++++++ ++++
T Consensus       210 g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----~---------~~~~~~Dv~~~~~~~~~~  275 (450)
T PRK08261        210 GKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----G---------GTALALDITAPDAPARIA  275 (450)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----C---------CeEEEEeCCCHHHHHHHH
Confidence            789999999999999999999999999999988532  222222111     1         4578999999998 8877


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      +.
T Consensus       276 ~~  277 (450)
T PRK08261        276 EH  277 (450)
T ss_pred             HH
Confidence            53

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.12  E-value=4.6e-10  Score=69.59  Aligned_cols=72  Identities=26%  Similarity=0.251  Sum_probs=63.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      .+.++|||+++|||++++..+..+|++|.++.|+.+++.++...+.-.....+       +.+..+|+.|+++ ..++++
T Consensus        33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~-------v~~~S~d~~~Y~~v~~~~~~  105 (331)
T KOG1210|consen   33 RRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVED-------VSYKSVDVIDYDSVSKVIEE  105 (331)
T ss_pred             cceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccce-------eeEeccccccHHHHHHHHhh
Confidence            46899999999999999999999999999999999999999998876655433       7799999999999 888765

>PLN02686 cinnamoyl-CoA reductase

Probab=99.12  E-value=8.9e-10  Score=69.96  Aligned_cols=75  Identities=20%  Similarity=0.129  Sum_probs=53.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|.++|||++++||.+++++|+.+|++|+++.++.+..+.+. .+...+..   ......+.++.+|++|+++ .++++.
T Consensus        53 ~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~---~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         53 ARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEM---GRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccc---cccCCceEEEEcCCCCHHHHHHHHHh
Confidence            789999999999999999999999999998888765443332 22111100   0001127889999999998 877653

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.12  E-value=5.3e-10  Score=66.43  Aligned_cols=59  Identities=31%  Similarity=0.398  Sum_probs=49.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||++++||++++++|+++|++|++++|+.+..           ..         ..++.+|++++++ ++++++
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~---------~~~~~~D~~~~~~~~~~~~~   62 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-----------FP---------GELFACDLADIEQTAATLAQ   62 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-----------cC---------ceEEEeeCCCHHHHHHHHHH
Confidence            78999999999999999999999999999999986530           01         2467899999988 877653

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.11  E-value=7e-10  Score=70.83  Aligned_cols=69  Identities=19%  Similarity=0.166  Sum_probs=51.4

Q ss_pred             CcEEEEecCCChHHHH--HHHHHHhCCCEEEEEecCccch------------HHHHHHHHHHhhhccCCCCCCceEEEEe
Q 034737            6 GLSAFVTGGASGIGRA--LSLALAGKGVFVTVVDLSEEKG------------NEVAALVEKENAKFHSNLGFPSAMFIRC   71 (85)
Q Consensus         6 ~~~~litG~~~gig~~--~~~~l~~~g~~v~~~~~~~~~~------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~   71 (85)
                      +|++||||+++|||.+  +++.| ..|++++++++..+..            +...+.+...+..         +..+.+
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~---------a~~i~~  110 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLY---------AKSING  110 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCc---------eEEEEc
Confidence            6899999999999999  89999 9999988887533211            1233333322222         678999


Q ss_pred             cCCCHHH-HHHhhh
Q 034737           72 DVTNTKF-ALAFLR   84 (85)
Q Consensus        72 Dv~~~~~-~~~~~~   84 (85)
                      |++++++ ++++++
T Consensus       111 DVss~E~v~~lie~  124 (398)
T PRK13656        111 DAFSDEIKQKVIEL  124 (398)
T ss_pred             CCCCHHHHHHHHHH
Confidence            9999999 988875

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.10  E-value=1.2e-09  Score=68.38  Aligned_cols=72  Identities=18%  Similarity=0.164  Sum_probs=52.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +++++|||++++||.+++++|+.+|++|+++.|+......... +.....       .+.+.++.+|++|++. .++
T Consensus         7 ~~-~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~-------~~~~~~~~~Dl~d~~~~~~~   77 (338)
T PLN00198          7 TG-KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQE-------LGDLKIFGADLTDEESFEAP   77 (338)
T ss_pred             CC-CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCC-------CCceEEEEcCCCChHHHHHH
Confidence            45 7899999999999999999999999999888887654332221 110000       0127889999999988 776


Q ss_pred             hh
Q 034737           82 FL   83 (85)
Q Consensus        82 ~~   83 (85)
                      +.
T Consensus        78 ~~   79 (338)
T PLN00198         78 IA   79 (338)
T ss_pred             Hh
Confidence            64

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.10  E-value=8.3e-10  Score=62.40  Aligned_cols=69  Identities=26%  Similarity=0.368  Sum_probs=51.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH---HHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV---AALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      ++++|||++++||.+++++|+.+|+ .|+++.|+++..+..   ...+...+.         ++.++.+|++++++ +++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~~D~~~~~~~~~~   71 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGA---------EVTVVACDVADRAALAAA   71 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCC---------eEEEEECCCCCHHHHHHH
Confidence            4789999999999999999999997 677888876543322   233332222         27889999999988 877


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +.+
T Consensus        72 ~~~   74 (180)
T smart00822       72 LAA   74 (180)
T ss_pred             HHH
Confidence            653

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN02214 cinnamoyl-CoA reductase

Probab=99.09  E-value=1.3e-09  Score=68.60  Aligned_cols=69  Identities=16%  Similarity=0.125  Sum_probs=52.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH-HHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV-AALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +++++|||++++||.+++++|+++|++|++++|+.+..... ...+...         ..++.++.+|++++++ .++++
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~   80 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGG---------KERLILCKADLQDYEALKAAID   80 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCC---------CCcEEEEecCcCChHHHHHHHh
Confidence            78999999999999999999999999999999986542221 1111110         1127889999999988 77764

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.09  E-value=1.7e-09  Score=70.30  Aligned_cols=73  Identities=22%  Similarity=0.222  Sum_probs=49.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-------hHH------HHHHHHHHhhhccCCCCCCceEEEEec
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-------GNE------VAALVEKENAKFHSNLGFPSAMFIRCD   72 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-------~~~------~~~~l~~~~~~~~~~~~~~~~~~~~~D   72 (85)
                      ++.++|||++|+||++++++|+.+|++|+++++....       .+.      ....+......     ...++.++.+|
T Consensus        47 ~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~~v~~D  121 (442)
T PLN02572         47 KKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-----SGKEIELYVGD  121 (442)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-----hCCcceEEECC
Confidence            7899999999999999999999999999998753211       000      01111100000     01128899999


Q ss_pred             CCCHHH-HHHhh
Q 034737           73 VTNTKF-ALAFL   83 (85)
Q Consensus        73 v~~~~~-~~~~~   83 (85)
                      ++|++. .++++
T Consensus       122 l~d~~~v~~~l~  133 (442)
T PLN02572        122 ICDFEFLSEAFK  133 (442)
T ss_pred             CCCHHHHHHHHH
Confidence            999998 88775

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.07  E-value=2.1e-09  Score=67.69  Aligned_cols=76  Identities=20%  Similarity=0.043  Sum_probs=53.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. ++.++|||++|.||.+++++|+++|++|++++|..................    ....++.++.+|+.|.+. .++
T Consensus        13 ~~-~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Di~d~~~l~~~   87 (348)
T PRK15181         13 LA-PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSE----EQWSRFIFIQGDIRKFTDCQKA   87 (348)
T ss_pred             cc-CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhcccc----ccCCceEEEEccCCCHHHHHHH
Confidence            45 689999999999999999999999999999998654322222222111000    011237899999999887 776


Q ss_pred             hh
Q 034737           82 FL   83 (85)
Q Consensus        82 ~~   83 (85)
                      ++
T Consensus        88 ~~   89 (348)
T PRK15181         88 CK   89 (348)
T ss_pred             hh
Confidence            54

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.07  E-value=8.9e-10  Score=66.02  Aligned_cols=62  Identities=35%  Similarity=0.501  Sum_probs=52.6

Q ss_pred             cCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737           13 GGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus        13 G~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      |++  +|||++++++|+++|++|++++|+.++.+...+++....+.          .++.+|++++++ ++++++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~----------~~~~~D~~~~~~v~~~~~~   65 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA----------EVIQCDLSDEESVEALFDE   65 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS----------EEEESCTTSHHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC----------ceEeecCcchHHHHHHHHH
Confidence            455  99999999999999999999999998877777777665543          359999999999 998765

...

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.06  E-value=5.8e-10  Score=66.35  Aligned_cols=40  Identities=35%  Similarity=0.444  Sum_probs=36.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      |+|+ +|+++|||++++||++++++|+++|++|++++|+..
T Consensus         1 ~~l~-~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~   40 (235)
T PRK06550          1 QEFM-TKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK   40 (235)
T ss_pred             CCCC-CCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            6788 999999999999999999999999999999988753

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.06  E-value=7.4e-10  Score=64.19  Aligned_cols=67  Identities=25%  Similarity=0.288  Sum_probs=58.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. |+.+++||+..|||+.+++.|+..|+.|+.+.|++..+..+.++....            ++.+..|+++.+. .+.
T Consensus         5 la-G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~------------I~Pi~~Dls~wea~~~~   71 (245)
T KOG1207|consen    5 LA-GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSL------------IIPIVGDLSAWEALFKL   71 (245)
T ss_pred             cc-ceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcc------------eeeeEecccHHHHHHHh
Confidence            56 999999999999999999999999999999999999888887766422            7889999999887 554


Q ss_pred             h
Q 034737           82 F   82 (85)
Q Consensus        82 ~   82 (85)
                      +
T Consensus        72 l   72 (245)
T KOG1207|consen   72 L   72 (245)
T ss_pred             h
Confidence            3

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.06  E-value=1.8e-09  Score=67.29  Aligned_cols=73  Identities=29%  Similarity=0.286  Sum_probs=55.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||+++.||.+++.+|+++|+.|+++|+-........+..+....      .+..+.|++.|+.|.+. +++|++
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~------~~~~v~f~~~Dl~D~~~L~kvF~~   75 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLG------EGKSVFFVEGDLNDAEALEKLFSE   75 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcC------CCCceEEEEeccCCHHHHHHHHhh
Confidence            57899999999999999999999999999999755433222222222111      02239999999999999 999875

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.05  E-value=1.2e-09  Score=65.17  Aligned_cols=71  Identities=25%  Similarity=0.260  Sum_probs=51.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC-CCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK-GVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      .+.++|||+.+|||..++++|++. |..+++. .|+++++   .+++....      ...+++..+++|+++.++ .+++
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~------~~d~rvHii~Ldvt~deS~~~~~   73 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKS------KSDSRVHIIQLDVTCDESIDNFV   73 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhh------ccCCceEEEEEecccHHHHHHHH
Confidence            457999999999999999999974 5555444 5667765   23333221      112349999999999999 9988


Q ss_pred             hhC
Q 034737           83 LRL   85 (85)
Q Consensus        83 ~~~   85 (85)
                      +++
T Consensus        74 ~~V   76 (249)
T KOG1611|consen   74 QEV   76 (249)
T ss_pred             HHH
Confidence            764

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.02  E-value=2.4e-09  Score=68.55  Aligned_cols=69  Identities=20%  Similarity=0.186  Sum_probs=53.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH--HHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE--VAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      ++.++|||++++||+++++.|+++|++|++++|+......  ....+......         +.++.+|++|+++ .+++
T Consensus        60 ~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~---------v~~v~~Dl~d~~~l~~~~  130 (390)
T PLN02657         60 DVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPG---------AEVVFGDVTDADSLRKVL  130 (390)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCC---------ceEEEeeCCCHHHHHHHH
Confidence            6789999999999999999999999999999998754321  11111111222         7899999999999 8876


Q ss_pred             h
Q 034737           83 L   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       131 ~  131 (390)
T PLN02657        131 F  131 (390)
T ss_pred             H
Confidence            5

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.02  E-value=5.1e-09  Score=60.28  Aligned_cols=58  Identities=26%  Similarity=0.287  Sum_probs=51.2

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++|+|+++.+|+.++++|+++|++|+++.|++++.+.        ...         +.++.+|+.|+++ .+++.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~---------~~~~~~d~~d~~~~~~al~   59 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPG---------VEIIQGDLFDPDSVKAALK   59 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTT---------EEEEESCTTCHHHHHHHHT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccc---------cccceeeehhhhhhhhhhh
Confidence            6899999999999999999999999999999986665        233         8999999999998 77764

...

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.99  E-value=3e-09  Score=79.68  Aligned_cols=35  Identities=29%  Similarity=0.317  Sum_probs=32.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecC
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLS   39 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~   39 (85)
                      ++++++|||+++|||..++++|+++ |++|++++|+
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence            4789999999999999999999988 6999999998

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.98  E-value=7.4e-09  Score=62.05  Aligned_cols=73  Identities=23%  Similarity=0.323  Sum_probs=59.5

Q ss_pred             CCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            2 ELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         2 ~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      .|. ||+++|+|-+  ++|+..+++.|.++|+.+...+.++ ++++-.+++.+.-..         ..+++||+++.++ 
T Consensus         3 ~L~-GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s---------~~v~~cDV~~d~~i   71 (259)
T COG0623           3 LLE-GKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS---------DLVLPCDVTNDESI   71 (259)
T ss_pred             ccC-CceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC---------CeEEecCCCCHHHH
Confidence            356 9999999955  5899999999999999999998887 566666666554433         5789999999999 


Q ss_pred             HHHhhhC
Q 034737           79 ALAFLRL   85 (85)
Q Consensus        79 ~~~~~~~   85 (85)
                      +++|.++
T Consensus        72 ~~~f~~i   78 (259)
T COG0623          72 DALFATI   78 (259)
T ss_pred             HHHHHHH
Confidence            9998753

>CHL00194 ycf39 Ycf39; Provisional

Probab=98.96  E-value=4.4e-09  Score=65.49  Aligned_cols=61  Identities=18%  Similarity=0.200  Sum_probs=49.3

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++|||++|.||++++++|+++|++|++++|+.+....    +..  ..         +.++.+|+.|+++ .++++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~--~~---------v~~v~~Dl~d~~~l~~al~   63 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE--WG---------AELVYGDLSLPETLPPSFK   63 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh--cC---------CEEEECCCCCHHHHHHHHC
Confidence            58999999999999999999999999999998643221    111  12         7899999999998 77765

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.96  E-value=4.4e-09  Score=62.73  Aligned_cols=65  Identities=22%  Similarity=0.179  Sum_probs=51.6

Q ss_pred             CcEEEEecCC-ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGA-SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~-~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .|.++||||+ +|||.++++.|.+.|+.|+.+.|.-+....+.-+.     .         +...++|++++++ ..+..
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----g---------l~~~kLDV~~~~~V~~v~~   72 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----G---------LKPYKLDVSKPEEVVTVSG   72 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----C---------CeeEEeccCChHHHHHHHH
Confidence            5789999977 58999999999999999999999876544433221     1         7889999999998 77654


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        73 e   73 (289)
T KOG1209|consen   73 E   73 (289)
T ss_pred             H
Confidence            4

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=98.95  E-value=5.8e-09  Score=62.10  Aligned_cols=60  Identities=18%  Similarity=0.243  Sum_probs=45.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      |+++|||+++|||++++++|++++  ..++..+++....      .  ..         +++.++++|++++++ +++.+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~--~~---------~~~~~~~~Dls~~~~~~~~~~   63 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F--QH---------DNVQWHALDVTDEAEIKQLSE   63 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c--cc---------CceEEEEecCCCHHHHHHHHH
Confidence            469999999999999999999985  5666666654321      0  11         228899999999998 77654

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=98.93  E-value=1.4e-08  Score=63.35  Aligned_cols=68  Identities=22%  Similarity=0.323  Sum_probs=49.2

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++|||++++||.+++++|+++|++|+++++...........+.....        .++.++.+|++|+++ .+++.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~Dl~d~~~~~~~~~   70 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGG--------KHPTFVEGDIRNEALLTEILH   70 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcC--------CCceEEEccCCCHHHHHHHHh
Confidence            589999999999999999999999999987654332222222221111        126788999999998 77664

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.93  E-value=4.3e-09  Score=65.12  Aligned_cols=72  Identities=21%  Similarity=0.143  Sum_probs=53.3

Q ss_pred             EEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++||||+|.||..++++|++.++ +++++++++.++..+..++....+...   -...+..+.+|+.|.+. .++++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~---v~~~~~~vigDvrd~~~l~~~~~   74 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPK---VRFEIVPVIGDVRDKERLNRIFE   74 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TT---CEEEEE--CTSCCHHHHHHHHTT
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccC---cccccCceeecccCHHHHHHHHh
Confidence            68999999999999999999986 699999999999999888865543211   00013456889999999 88876

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02427 UDP-apiose/xylose synthase

Probab=98.89  E-value=8.7e-09  Score=65.62  Aligned_cols=70  Identities=16%  Similarity=0.092  Sum_probs=50.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++++|||++|.||.+++++|+.+ |++|++++|+.........    ....    .....+.++.+|+.|.+. .++++
T Consensus        14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~----~~~~----~~~~~~~~~~~Dl~d~~~l~~~~~   85 (386)
T PLN02427         14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE----PDTV----PWSGRIQFHRINIKHDSRLEGLIK   85 (386)
T ss_pred             CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhc----cccc----cCCCCeEEEEcCCCChHHHHHHhh
Confidence            457999999999999999999998 5899999887644322211    1000    000138899999999988 77664

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.87  E-value=2.4e-08  Score=61.89  Aligned_cols=69  Identities=20%  Similarity=0.348  Sum_probs=51.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCc---cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSE---EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      +. +|+++|+|+ +|+|++++..|+..|++ |++++|+.   ++++.+.+++...+..         +.+..+|+++.++
T Consensus       124 ~~-~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~---------~~~~~~d~~~~~~  192 (289)
T PRK12548        124 VK-GKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPE---------CIVNVYDLNDTEK  192 (289)
T ss_pred             cC-CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCC---------ceeEEechhhhhH
Confidence            44 789999999 69999999999999986 99999987   5566666666443332         4566778877665


Q ss_pred             -HHHh
Q 034737           79 -ALAF   82 (85)
Q Consensus        79 -~~~~   82 (85)
                       .+.+
T Consensus       193 ~~~~~  197 (289)
T PRK12548        193 LKAEI  197 (289)
T ss_pred             HHhhh
Confidence             5544

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.86  E-value=4.3e-09  Score=65.43  Aligned_cols=37  Identities=32%  Similarity=0.460  Sum_probs=33.4

Q ss_pred             CCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecC
Q 034737            2 ELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         2 ~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++. +|+++|||++  +|||+++++.|+++|++|++.++.
T Consensus         5 ~~~-gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~   43 (299)
T PRK06300          5 DLT-GKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV   43 (299)
T ss_pred             CCC-CCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence            356 9999999996  999999999999999999998754

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.85  E-value=2e-08  Score=62.25  Aligned_cols=64  Identities=23%  Similarity=0.253  Sum_probs=51.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +.+|||||++-||.+++..|++.|++|+++|+.............              ..|+++|+.|.+. .++|++
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~--------------~~f~~gDi~D~~~L~~vf~~   65 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ--------------FKFYEGDLLDRALLTAVFEE   65 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc--------------CceEEeccccHHHHHHHHHh
Confidence            368999999999999999999999999999987644333322111              4799999999999 888864

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=98.85  E-value=8.6e-09  Score=63.81  Aligned_cols=62  Identities=18%  Similarity=0.206  Sum_probs=49.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++++|||++++||.++++.|+++|++|++++|+++......      ...         +.++.+|++++++ .++++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~---------~~~~~~D~~~~~~l~~~~~   63 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE------GLD---------VEIVEGDLRDPASLRKAVA   63 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc------cCC---------ceEEEeeCCCHHHHHHHHh
Confidence            36899999999999999999999999999999865432111      011         7889999999988 77664

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=98.84  E-value=2.3e-08  Score=60.39  Aligned_cols=60  Identities=22%  Similarity=0.288  Sum_probs=46.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH-HH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT-KF   78 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~   78 (85)
                      ++.++|||++++||+.++++|+.+|++|+++.|+++......   . ....         +.++.+|+++. ..
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~-~~~~---------~~~~~~Dl~d~~~~   77 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL---P-QDPS---------LQIVRADVTEGSDK   77 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc---c-cCCc---------eEEEEeeCCCCHHH
Confidence            678999999999999999999999999999999876433221   1 1112         78899999983 44

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.84  E-value=7.7e-08  Score=56.33  Aligned_cols=70  Identities=24%  Similarity=0.319  Sum_probs=54.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. ++.++|.|+++++|+.+++.|+..|++|+++.|+.++.+...+.+.....          .....+|+.+.++ .+
T Consensus        25 ~l~-~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~----------~~~~~~~~~~~~~~~~   93 (194)
T cd01078          25 DLK-GKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG----------EGVGAVETSDDAARAA   93 (194)
T ss_pred             CCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC----------CcEEEeeCCCHHHHHH
Confidence            456 88999999999999999999999999999999998877777666643221          3445567777666 55


Q ss_pred             Hh
Q 034737           81 AF   82 (85)
Q Consensus        81 ~~   82 (85)
                      .+
T Consensus        94 ~~   95 (194)
T cd01078          94 AI   95 (194)
T ss_pred             HH
Confidence            54

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=98.79  E-value=2.9e-08  Score=62.42  Aligned_cols=68  Identities=22%  Similarity=0.192  Sum_probs=46.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEE-EEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVT-VVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +.++|||++++||.++++.|+++|+.++ ++++.... .... .+.....       ..++.++.+|++|+++ +++++
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~-~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~   71 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNLM-SLAPVAQ-------SERFAFEKVDICDRAELARVFT   71 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cchh-hhhhccc-------CCceEEEECCCcChHHHHHHHh
Confidence            4799999999999999999999998754 45554321 1111 1111000       1127788999999998 88775

>PRK07578 short chain dehydrogenase; Provisional

Probab=98.78  E-value=3.9e-08  Score=57.36  Aligned_cols=32  Identities=28%  Similarity=0.344  Sum_probs=29.6

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +++|||+++|||++++++|+++ ++|++++|+.
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~   33 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSS   33 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC
Confidence            6899999999999999999999 9999998864

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.77  E-value=1.3e-07  Score=56.02  Aligned_cols=61  Identities=25%  Similarity=0.233  Sum_probs=49.2

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++|||+++.||.+++++|+++|+.|+.+.+............     .         +.++.+|+.+.+. .++++
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~---------~~~~~~dl~~~~~~~~~~~   62 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----N---------VEFVIGDLTDKEQLEKLLE   62 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----T---------EEEEESETTSHHHHHHHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----e---------EEEEEeecccccccccccc
Confidence            689999999999999999999999888887765443322222     2         8999999999988 88765

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=98.76  E-value=5.1e-08  Score=59.99  Aligned_cols=66  Identities=26%  Similarity=0.341  Sum_probs=46.8

Q ss_pred             EEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccc--hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            8 SAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEK--GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      .++|||++++||.+++++|+..|  .+|+++++....  .+... .+. ..         +.+.++.+|++++++ .+++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-~~~-~~---------~~~~~~~~Dl~~~~~~~~~~   69 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLA-DLE-DN---------PRYRFVKGDIGDRELVSRLF   69 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhh-hhc-cC---------CCcEEEEcCCcCHHHHHHHH
Confidence            37999999999999999999987  688888764321  11111 111 01         127889999999999 8876


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      +.
T Consensus        70 ~~   71 (317)
T TIGR01181        70 TE   71 (317)
T ss_pred             hh
Confidence            53

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=98.74  E-value=6.9e-08  Score=59.60  Aligned_cols=65  Identities=26%  Similarity=0.299  Sum_probs=47.5

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++|||++++||..++++|+++|++|+++++...........+... ..         +.++.+|++++++ .+++.
T Consensus         2 vlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~D~~~~~~~~~~~~   67 (328)
T TIGR01179         2 ILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-TR---------VTFVEGDLRDRELLDRLFE   67 (328)
T ss_pred             EEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-cc---------eEEEECCCCCHHHHHHHHH
Confidence            789999999999999999999999988876443222211111111 12         7788999999998 87764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.71  E-value=3.9e-08  Score=60.63  Aligned_cols=63  Identities=24%  Similarity=0.271  Sum_probs=46.5

Q ss_pred             EEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737           10 FVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus        10 litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ||||++|.||.+++++|+++|  +.|.++++.+.....  ..+. ....         ..++.+|++|+++ .++++.
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~-~~~~---------~~~~~~Di~d~~~l~~a~~g   66 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQ-KSGV---------KEYIQGDITDPESLEEALEG   66 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhh-cccc---------eeEEEeccccHHHHHHHhcC
Confidence            699999999999999999999  688888877643221  1111 1111         3499999999999 887753

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.68  E-value=9.8e-08  Score=60.80  Aligned_cols=62  Identities=15%  Similarity=0.149  Sum_probs=45.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      ++.++|||+++.||.++++.|..+|++|++++|.......      .....         ..++.+|+.+.+. ..++
T Consensus        21 ~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~------~~~~~---------~~~~~~Dl~d~~~~~~~~   83 (370)
T PLN02695         21 KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS------EDMFC---------HEFHLVDLRVMENCLKVT   83 (370)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc------ccccc---------ceEEECCCCCHHHHHHHH
Confidence            7899999999999999999999999999999986431100      00001         4567788887776 5544

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=98.66  E-value=1.9e-07  Score=58.71  Aligned_cols=65  Identities=25%  Similarity=0.194  Sum_probs=45.3

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCE-EEEEecCcc--chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEE--KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++|||++++||.+++++|+.+|+. |+++++...  ..+... .+   ..       ...+.++.+|++|.++ .++++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~---~~-------~~~~~~~~~Dl~d~~~~~~~~~   70 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DV---SD-------SERYVFEHADICDRAELDRIFA   70 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hc---cc-------CCceEEEEecCCCHHHHHHHHH
Confidence            5899999999999999999999976 555555321  111111 11   11       1127889999999999 88775

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.62  E-value=1.4e-07  Score=58.01  Aligned_cols=59  Identities=25%  Similarity=0.247  Sum_probs=44.9

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      .++|||++|.||.+++++|..+|++|+.++|.........       ..         +.++.+|+++.+. .+.+
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~---------~~~~~~d~~~~~~~~~~~   61 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SG---------VEFVVLDLTDRDLVDELA   61 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cc---------cceeeecccchHHHHHHH
Confidence            4899999999999999999999999999999765433322       11         5677777777655 4443

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.61  E-value=1.9e-07  Score=58.78  Aligned_cols=62  Identities=19%  Similarity=0.282  Sum_probs=44.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCC-CHHH-HHHh
Q 034737            7 LSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVT-NTKF-ALAF   82 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~-~~~~   82 (85)
                      +.++|||++|.||.+++++|+.. |++|++++|+......    +. ..         +.+.++.+|+. +.+. .+++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~-~~---------~~~~~~~~Dl~~~~~~~~~~~   66 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LV-NH---------PRMHFFEGDITINKEWIEYHV   66 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hc-cC---------CCeEEEeCCCCCCHHHHHHHH
Confidence            36999999999999999999986 6999999886532211    11 01         12788899997 5555 5544

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.60  E-value=6.1e-07  Score=53.59  Aligned_cols=63  Identities=21%  Similarity=0.240  Sum_probs=48.3

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++|+|++|.+|+++++.|+..++.|.++.|+...  .....+...+           +.++.+|+.|+++ .++++-
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g-----------~~vv~~d~~~~~~l~~al~g   64 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALG-----------AEVVEADYDDPESLVAALKG   64 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTT-----------TEEEES-TT-HHHHHHHHTT
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhccc-----------ceEeecccCCHHHHHHHHcC
Confidence            6899999999999999999999999999999832  2233343322           6778999999999 887753

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.58  E-value=1.3e-07  Score=57.91  Aligned_cols=56  Identities=16%  Similarity=0.207  Sum_probs=45.9

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      ++|||++|.+|.+++++|++.|++|.++.|+++....         ..         +..+.+|+.|+++ .+++
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------~~---------~~~~~~d~~d~~~l~~a~   58 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------PN---------EKHVKFDWLDEDTWDNPF   58 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------CC---------CccccccCCCHHHHHHHH
Confidence            7899999999999999999999999999999764310         11         5567788888888 7765

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.56  E-value=2.5e-07  Score=62.79  Aligned_cols=58  Identities=17%  Similarity=0.218  Sum_probs=44.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTK   77 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~   77 (85)
                      ++.++|||++|.||.+++++|+.. |++|++++|+.......   +  ..         +.+.++.+|++|..
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~--~~---------~~~~~~~gDl~d~~  373 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---L--GH---------PRFHFVEGDISIHS  373 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---c--CC---------CceEEEeccccCcH
Confidence            678999999999999999999985 79999999876432211   0  01         12788889998754

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.55  E-value=5e-07  Score=56.51  Aligned_cols=68  Identities=12%  Similarity=0.134  Sum_probs=44.8

Q ss_pred             EEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccch---HHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            8 SAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKG---NEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      +++|||++++||.+++++|+++|  ++|+++.|+.+..   +++.+.+...... ......+++.++.+|++++
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~v~~~~~D~~~~   73 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLW-QEDLARERIEVVAGDLSEP   73 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCC-CchhhhCCEEEEeCCcCcc
Confidence            47999999999999999999998  6799999876532   2222222211110 0000003489999999864

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.54  E-value=5.7e-07  Score=54.42  Aligned_cols=60  Identities=20%  Similarity=0.187  Sum_probs=51.4

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++|||+++.+|.+++++|+.+|+.|.+..|+++......       ..         +.+...|+.++.+ ...+.
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~---------v~~~~~d~~~~~~l~~a~~   62 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GG---------VEVVLGDLRDPKSLVAGAK   62 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CC---------cEEEEeccCCHhHHHHHhc
Confidence            5899999999999999999999999999999987766654       22         7889999999988 66543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.47  E-value=1.1e-06  Score=59.72  Aligned_cols=68  Identities=15%  Similarity=0.211  Sum_probs=47.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      .+.++|||++|.||.+++++|+.+  +++|+++++.... .... .+...       ...+.+.++.+|++|.+. ..++
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~~-~l~~~-------~~~~~v~~~~~Dl~d~~~~~~~~   76 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNLK-NLNPS-------KSSPNFKFVKGDIASADLVNYLL   76 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chhh-hhhhc-------ccCCCeEEEECCCCChHHHHHHH
Confidence            689999999999999999999987  6789888875311 1111 11100       011238899999999887 6654

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.47  E-value=9e-07  Score=57.78  Aligned_cols=35  Identities=43%  Similarity=0.443  Sum_probs=32.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++.++|||++|.||.+++++|+++|++|+++++..
T Consensus       119 ~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~  153 (442)
T PLN02206        119 GLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFF  153 (442)
T ss_pred             CCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCC
Confidence            68899999999999999999999999999988753

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.43  E-value=7.7e-07  Score=55.17  Aligned_cols=74  Identities=20%  Similarity=0.128  Sum_probs=55.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||-++.-|..+++.|+.+|+.|..+.|..+......-.|.+.+     -.+.+++.++.+|++|..+ .++++.
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~-----~~~~~~l~l~~gDLtD~~~l~r~l~~   76 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDP-----HLNDPRLHLHYGDLTDSSNLLRILEE   76 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceecccc-----ccCCceeEEEeccccchHHHHHHHHh
Confidence            6899999999999999999999999999999886543222210222111     1234458999999999998 887765

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.42  E-value=1.1e-06  Score=54.64  Aligned_cols=67  Identities=25%  Similarity=0.306  Sum_probs=48.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCE--EEEEecCc--cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVF--VTVVDLSE--EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~--v~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +.+|||||+++||..+++.++.+...  |+.+|.-.  ...+.+.. +.          +.++..|+++|+.|.+. .++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~-~~----------~~~~~~fv~~DI~D~~~v~~~   69 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLAD-VE----------DSPRYRFVQGDICDRELVDRL   69 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHh-hh----------cCCCceEEeccccCHHHHHHH
Confidence            36899999999999999999998754  56666532  22333321 11          22349999999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        70 ~~~   72 (340)
T COG1088          70 FKE   72 (340)
T ss_pred             HHh
Confidence            864

>PRK05865 hypothetical protein; Provisional

Probab=98.41  E-value=1.8e-06  Score=60.23  Aligned_cols=58  Identities=24%  Similarity=0.287  Sum_probs=47.5

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++|||++++||.+++++|+.+|++|++++|+....      +   ...         +.++.+|+.|.++ .++++
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~---------v~~v~gDL~D~~~l~~al~   60 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSS---------ADFIAADIRDATAVESAMT   60 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccC---------ceEEEeeCCCHHHHHHHHh
Confidence            589999999999999999999999999999875321      1   012         7789999999988 87765

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.39  E-value=2.1e-06  Score=56.00  Aligned_cols=35  Identities=40%  Similarity=0.408  Sum_probs=32.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .+.++|||++|.||.+++++|+.+|++|++++|..
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~  154 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF  154 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            46899999999999999999999999999998864

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.38  E-value=6.1e-06  Score=55.84  Aligned_cols=71  Identities=11%  Similarity=0.135  Sum_probs=46.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC---EEEEEecCccc---hHHHHHHH---------HHHhhhccCCCCCCceEEEE
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV---FVTVVDLSEEK---GNEVAALV---------EKENAKFHSNLGFPSAMFIR   70 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~---~v~~~~~~~~~---~~~~~~~l---------~~~~~~~~~~~~~~~~~~~~   70 (85)
                      +++++|||++|.||..++++|++.+.   +|+++.|....   .+++..++         ++..+.........++.++.
T Consensus       119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~  198 (605)
T PLN02503        119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV  198 (605)
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence            89999999999999999999998764   57888876432   22222222         11111100011235699999


Q ss_pred             ecCCCH
Q 034737           71 CDVTNT   76 (85)
Q Consensus        71 ~Dv~~~   76 (85)
                      +|++++
T Consensus       199 GDl~d~  204 (605)
T PLN02503        199 GNVCES  204 (605)
T ss_pred             eeCCCc
Confidence            999987

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=98.34  E-value=1.9e-06  Score=54.98  Aligned_cols=69  Identities=29%  Similarity=0.320  Sum_probs=50.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      +.+++||||+|.+|++++.+|++++  ..|.++|..+.....-.+.......         .+.++.+|+.+..+ .+.+
T Consensus         4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~---------~v~~~~~D~~~~~~i~~a~   74 (361)
T KOG1430|consen    4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSG---------RVTVILGDLLDANSISNAF   74 (361)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCC---------ceeEEecchhhhhhhhhhc
Confidence            6789999999999999999999998  6788888776421111111111222         28889999999888 7665


Q ss_pred             h
Q 034737           83 L   83 (85)
Q Consensus        83 ~   83 (85)
                      .
T Consensus        75 ~   75 (361)
T KOG1430|consen   75 Q   75 (361)
T ss_pred             c
Confidence            4

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.34  E-value=3e-06  Score=54.54  Aligned_cols=65  Identities=25%  Similarity=0.359  Sum_probs=54.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +.++|.|+ |++|+.++..|++++ .+|.+.+|+.++..+.......            ++.+.++|+.|.+. .++++.
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~------------~v~~~~vD~~d~~al~~li~~   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG------------KVEALQVDAADVDALVALIKD   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc------------cceeEEecccChHHHHHHHhc
Confidence            35888888 999999999999999 8999999999887777654432            28999999999998 887753

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.29  E-value=5.3e-06  Score=53.99  Aligned_cols=48  Identities=33%  Similarity=0.374  Sum_probs=38.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHH
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALV   50 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l   50 (85)
                      |+|. +|.++|+|+++ +|.++++.|+..|++|.+++++. +..+...+++
T Consensus         1 ~~~~-~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l   49 (450)
T PRK14106          1 MELK-GKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEEL   49 (450)
T ss_pred             CCcC-CCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHH
Confidence            6777 89999999877 99999999999999999999875 3343333444

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.29  E-value=2.2e-06  Score=53.13  Aligned_cols=31  Identities=26%  Similarity=0.381  Sum_probs=28.2

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      .++|||++|.||.+++++|+.+| +|++++|.
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~   32 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVH   32 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccc
Confidence            59999999999999999999999 78888775

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.26  E-value=8.8e-06  Score=54.99  Aligned_cols=60  Identities=27%  Similarity=0.257  Sum_probs=42.7

Q ss_pred             EEEEecCCChHHHHHHHHHH--hCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            8 SAFVTGGASGIGRALSLALA--GKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~--~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      +++|||++|.||.+++++|+  ..|++|++++|+... ...........        ..++.++.+|++++
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~--------~~~v~~~~~Dl~~~   63 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWG--------ADRVVPLVGDLTEP   63 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcC--------CCcEEEEecccCCc
Confidence            69999999999999999999  589999999996532 22211111111        01278899999884

>PRK12320 hypothetical protein; Provisional

Probab=98.25  E-value=5.8e-06  Score=56.72  Aligned_cols=51  Identities=16%  Similarity=0.309  Sum_probs=40.8

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      .++|||++|.||.+++++|+.+|+.|+++++.+...         ....         +.++.+|+.++
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~---------ve~v~~Dl~d~   52 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPR---------VDYVCASLRNP   52 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCC---------ceEEEccCCCH
Confidence            589999999999999999999999999999864310         0112         67788888876

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.23  E-value=6e-06  Score=53.43  Aligned_cols=37  Identities=35%  Similarity=0.442  Sum_probs=32.8

Q ss_pred             CCCCcEEEEecC----------------CChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            3 LKPGLSAFVTGG----------------ASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         3 l~~~~~~litG~----------------~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      |. +|+++||||                ++.+|.++++.|..+|++|++++++.
T Consensus       186 l~-gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~  238 (399)
T PRK05579        186 LA-GKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPV  238 (399)
T ss_pred             cC-CCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCc
Confidence            56 899999999                44599999999999999999998765

>PLN02778 3,5-epimerase/4-reductase

Probab=98.23  E-value=1.1e-05  Score=50.20  Aligned_cols=47  Identities=17%  Similarity=0.126  Sum_probs=36.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      .+.++|||++|.||.+++++|..+|++|+....+....+.+...+..
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~   55 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDA   55 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHh
Confidence            46799999999999999999999999987655444444444444543

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.22  E-value=4.9e-06  Score=51.71  Aligned_cols=36  Identities=33%  Similarity=0.322  Sum_probs=33.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      ++.++|||++++||.+++++|+.+|..|+++|.-..
T Consensus        27 ~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ft   62 (350)
T KOG1429|consen   27 NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFT   62 (350)
T ss_pred             CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccc
Confidence            689999999999999999999999999999987543

>PLN00016 RNA-binding protein; Provisional

Probab=98.22  E-value=4.3e-06  Score=53.37  Aligned_cols=37  Identities=27%  Similarity=0.291  Sum_probs=33.9

Q ss_pred             CcEEEEe----cCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            6 GLSAFVT----GGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         6 ~~~~lit----G~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      .+.++||    |+++.||.+++++|+++|++|++++|+...
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~   92 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP   92 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence            4679999    999999999999999999999999998754

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.21  E-value=2.3e-06  Score=52.92  Aligned_cols=31  Identities=39%  Similarity=0.424  Sum_probs=26.5

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++|||++|.||.+++++|++.|++++++.++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~   32 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecC
Confidence            7999999999999999999999965555443

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.14  E-value=1.9e-05  Score=48.55  Aligned_cols=77  Identities=18%  Similarity=0.014  Sum_probs=56.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      .|+++|||-++.-|..+++.|+.+|+.|..+-|..+......=+.....+.+   -.+.......+|++|..+ .+++..
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~---h~~~~mkLHYgDmTDss~L~k~I~~  104 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHT---HNGASMKLHYGDMTDSSCLIKLIST  104 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchh---cccceeEEeeccccchHHHHHHHhc
Confidence            5799999999999999999999999999888776655444332222222221   233558899999999998 888764


Q ss_pred             C
Q 034737           85 L   85 (85)
Q Consensus        85 ~   85 (85)
                      |
T Consensus       105 i  105 (376)
T KOG1372|consen  105 I  105 (376)
T ss_pred             c
Confidence            3

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.14  E-value=1.5e-05  Score=44.34  Aligned_cols=47  Identities=34%  Similarity=0.530  Sum_probs=42.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCccchHHHHHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~l   50 (85)
                      ++. ++.++|.|+ ||.|++++..|...|++ |.++.|+.++++.+.+.+
T Consensus         9 ~l~-~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~   56 (135)
T PF01488_consen    9 DLK-GKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF   56 (135)
T ss_dssp             TGT-TSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred             CcC-CCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence            356 899999987 99999999999999987 999999999888888877

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.13  E-value=4.1e-06  Score=51.12  Aligned_cols=34  Identities=38%  Similarity=0.500  Sum_probs=31.4

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      ++|||++|.||.++++.|+++|++|++++|+...
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   34 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPA   34 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence            5899999999999999999999999999997754

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.13  E-value=1.2e-05  Score=49.17  Aligned_cols=31  Identities=29%  Similarity=0.464  Sum_probs=29.4

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++|||+++.||.+++++|+++|++|+++.|.
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~   32 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS   32 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence            7999999999999999999999999999885

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.13  E-value=4.3e-06  Score=50.65  Aligned_cols=67  Identities=9%  Similarity=0.041  Sum_probs=38.7

Q ss_pred             EecCCChHHHHHHHHHHhCCC--EEEEEecCccc---hHHHHHHHHHHhhhccC-CCCCCceEEEEecCCCHH
Q 034737           11 VTGGASGIGRALSLALAGKGV--FVTVVDLSEEK---GNEVAALVEKENAKFHS-NLGFPSAMFIRCDVTNTK   77 (85)
Q Consensus        11 itG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~---~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~Dv~~~~   77 (85)
                      +||++|.+|.++.++|+..+.  +|+++.|..+.   .+++.+.+...+..... .....++.++.+|++++.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~   73 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPN   73 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGG
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccc
Confidence            799999999999999999876  89999997643   22232222211100000 001244999999999864

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02996 fatty acyl-CoA reductase

Probab=98.12  E-value=3.9e-05  Score=50.87  Aligned_cols=36  Identities=8%  Similarity=0.066  Sum_probs=30.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC---EEEEEecCcc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV---FVTVVDLSEE   41 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~---~v~~~~~~~~   41 (85)
                      +|+++|||++|.||.++++.|++.+.   +|+++.|...
T Consensus        11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~   49 (491)
T PLN02996         11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASD   49 (491)
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCC
Confidence            89999999999999999999998653   5778877653

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.11  E-value=2.4e-05  Score=50.15  Aligned_cols=64  Identities=27%  Similarity=0.329  Sum_probs=48.5

Q ss_pred             EEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            9 AFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++|.|+ |.+|+.+++.|++...  +|++.+|+.++++.....+  ....         +.++++|+.|.++ .++++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~---------~~~~~~d~~~~~~l~~~~~~   67 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDR---------VEAVQVDVNDPESLAELLRG   67 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTT---------EEEEE--TTTHHHHHHHHTT
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccc---------eeEEEEecCCHHHHHHHHhc
Confidence            578899 9999999999999875  7999999998888876655  2222         8999999999999 888764

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.10  E-value=1.2e-05  Score=52.36  Aligned_cols=50  Identities=28%  Similarity=0.141  Sum_probs=40.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHH
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      |++. +|+++|+|+++ +|.++++.|++.|++|++.+++........+.+..
T Consensus         1 ~~~~-~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~   50 (447)
T PRK02472          1 TEYQ-NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE   50 (447)
T ss_pred             CCcC-CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh
Confidence            7788 99999999975 99999999999999999999876444444444443

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.07  E-value=1.6e-05  Score=50.47  Aligned_cols=48  Identities=27%  Similarity=0.340  Sum_probs=39.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhC-C-CEEEEEecCccchHHHHHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGK-G-VFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~-g-~~v~~~~~~~~~~~~~~~~l   50 (85)
                      ++. +++++|||++|.||..++++|+.+ | .+++++.|+.+++..+..++
T Consensus       152 ~l~-~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el  201 (340)
T PRK14982        152 DLS-KATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL  201 (340)
T ss_pred             CcC-CCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            356 899999999999999999999864 5 48889999877777766555

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.96  E-value=3.5e-05  Score=51.56  Aligned_cols=46  Identities=33%  Similarity=0.466  Sum_probs=39.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      +. +|+++|+|+ +|+|++++..|...|++|++++|+.++.+.+.+.+
T Consensus       377 ~~-~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        377 LA-GKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CC-CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            45 789999999 69999999999999999999999887777766544

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.95  E-value=0.00013  Score=49.80  Aligned_cols=75  Identities=15%  Similarity=0.061  Sum_probs=55.2

Q ss_pred             CcEEEEecCC-ChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGA-SGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~-~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      .++++|||++ ++|+-+++.+|+..|+.||+...+-+ +.....+.|-.++.     +.+..+.++..+++++.+ ++++
T Consensus       396 d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a-----~~ga~LwvVpaN~~SysDVdAlI  470 (866)
T COG4982         396 DKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHA-----RYGAALWVVPANMGSYSDVDALI  470 (866)
T ss_pred             cceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhC-----CCCceEEEEeccccchhhHHHHH
Confidence            6899999977 47999999999999999998876543 22233333333332     245568999999999999 8887


Q ss_pred             hhC
Q 034737           83 LRL   85 (85)
Q Consensus        83 ~~~   85 (85)
                      +.|
T Consensus       471 ewI  473 (866)
T COG4982         471 EWI  473 (866)
T ss_pred             HHh
Confidence            643

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.94  E-value=5.2e-05  Score=46.86  Aligned_cols=47  Identities=34%  Similarity=0.521  Sum_probs=40.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      +. ++.++|.|+ +|+|++++..|...| .+|+++.|+.++.+.+.+.+.
T Consensus       121 ~~-~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        121 LK-GKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CC-CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            45 789999987 899999999999999 689999999888877776654

>PRK09620 hypothetical protein; Provisional

Probab=97.90  E-value=4.4e-05  Score=46.14  Aligned_cols=35  Identities=31%  Similarity=0.511  Sum_probs=31.3

Q ss_pred             CCCCcEEEEecCC----------------ChHHHHHHHHHHhCCCEEEEEec
Q 034737            3 LKPGLSAFVTGGA----------------SGIGRALSLALAGKGVFVTVVDL   38 (85)
Q Consensus         3 l~~~~~~litG~~----------------~gig~~~~~~l~~~g~~v~~~~~   38 (85)
                      |. ||.++||+|+                |.+|.++++.|+.+|+.|+++++
T Consensus         1 l~-gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g   51 (229)
T PRK09620          1 MK-GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG   51 (229)
T ss_pred             CC-CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence            35 8999999886                88999999999999999998875

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=97.89  E-value=6.8e-05  Score=46.34  Aligned_cols=32  Identities=44%  Similarity=0.518  Sum_probs=28.2

Q ss_pred             EEEecCCChHHHHHHHHHHhCCC-EEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~   40 (85)
                      ++|||+++.||.++++.|..+|+ .|+++++..
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~   33 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLR   33 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCC
Confidence            58999999999999999999998 688877654

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=97.88  E-value=2.6e-05  Score=48.21  Aligned_cols=37  Identities=35%  Similarity=0.495  Sum_probs=33.0

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++|||+++.||++++.+|...|+.|+++.|++.+...
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~   37 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ   37 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhh
Confidence            5899999999999999999999999999998765433

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.85  E-value=8.4e-05  Score=44.01  Aligned_cols=46  Identities=30%  Similarity=0.385  Sum_probs=38.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~   49 (85)
                      ++. +|+++|.|.+ .+|..+++.|.+.|++|++.+++++..+...+.
T Consensus        25 ~l~-gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          25 SLE-GKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCC-CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            356 8999999984 899999999999999999999987766655543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=97.85  E-value=5.7e-05  Score=47.28  Aligned_cols=68  Identities=19%  Similarity=0.240  Sum_probs=53.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      |-++-+-|+++++|+.++.+|++.|..|++-+|..+....-.+-+.          +-.++.++..|+.|++| +++++
T Consensus        61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmG----------dLGQvl~~~fd~~DedSIr~vvk  129 (391)
T KOG2865|consen   61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMG----------DLGQVLFMKFDLRDEDSIRAVVK  129 (391)
T ss_pred             ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecc----------cccceeeeccCCCCHHHHHHHHH
Confidence            6788999999999999999999999999999997654322222221          11238999999999999 98875

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.78  E-value=0.00014  Score=44.71  Aligned_cols=45  Identities=22%  Similarity=0.353  Sum_probs=39.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      ++.++++|+ +|+|++++..|...|++|.+++|+.++.+.+.+.+.
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~  161 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQ  161 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            688999998 699999999999999999999999887777766654

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.76  E-value=0.00017  Score=46.31  Aligned_cols=68  Identities=13%  Similarity=0.159  Sum_probs=45.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCcc---chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEE---KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      +++++||++|.+|..+...|+.+- .+|++..|-++   ...++.+.+... ...+ .....+++.+.+|++.+
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~-~~~~-e~~~~ri~vv~gDl~e~   72 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLY-RHWD-ELSADRVEVVAGDLAEP   72 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhh-hhhh-hhhcceEEEEecccccc
Confidence            478999999999999999998765 48999887553   344444444411 1110 12334599999999844

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=97.73  E-value=5.8e-05  Score=46.46  Aligned_cols=29  Identities=28%  Similarity=0.343  Sum_probs=25.5

Q ss_pred             EEecCCChHHHHHHHHHHhCCCEEEEEec
Q 034737           10 FVTGGASGIGRALSLALAGKGVFVTVVDL   38 (85)
Q Consensus        10 litG~~~gig~~~~~~l~~~g~~v~~~~~   38 (85)
                      +|||++|.||.++++.|+..|+.|+++.+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~   29 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRT   29 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeec
Confidence            58999999999999999999998776643

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.73  E-value=0.00034  Score=37.52  Aligned_cols=57  Identities=26%  Similarity=0.307  Sum_probs=42.5

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+.+.+..               +.++.+|.++++. +++
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~---------------~~~i~gd~~~~~~l~~a   58 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEG---------------VEVIYGDATDPEVLERA   58 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT---------------SEEEES-TTSHHHHHHT
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc---------------cccccccchhhhHHhhc
Confidence            467766 57999999999997779999999987655544321               6788899998887 553

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.70  E-value=0.0001  Score=47.67  Aligned_cols=36  Identities=36%  Similarity=0.514  Sum_probs=31.6

Q ss_pred             CCCCcEEEEecC---------------CCh-HHHHHHHHHHhCCCEEEEEecC
Q 034737            3 LKPGLSAFVTGG---------------ASG-IGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         3 l~~~~~~litG~---------------~~g-ig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      +. ||.++|||+               ++| +|.++++.|..+|++|+++++.
T Consensus       183 ~~-~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~  234 (390)
T TIGR00521       183 LE-GKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGP  234 (390)
T ss_pred             cC-CceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCC
Confidence            56 899999999               556 9999999999999999988754

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=97.70  E-value=0.00043  Score=42.93  Aligned_cols=62  Identities=26%  Similarity=0.315  Sum_probs=40.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc---cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE---EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTK   77 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~   77 (85)
                      +.++|+|++|.||.++.+.|..+|+.++..+|..   ...+.+.+.+....+.         +++.-+-+++++
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd---------~Vin~aa~~~~~   65 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAFKPD---------VVINCAAYTNVD   65 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH--S---------EEEE------HH
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHhCCC---------eEeccceeecHH
Confidence            3699999999999999999999999999887654   2344555555544444         555544444443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.69  E-value=0.00036  Score=42.03  Aligned_cols=59  Identities=24%  Similarity=0.372  Sum_probs=45.9

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH-HHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA-LVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      .++|.|+ +-+|..+++.|.+.|++|++++++++..++... ++.              ...+.+|-++++- +++
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~--------------~~~v~gd~t~~~~L~~a   62 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELD--------------THVVIGDATDEDVLEEA   62 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcc--------------eEEEEecCCCHHHHHhc
Confidence            4677766 778999999999999999999999987666332 222              6778888888876 554

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.68  E-value=0.00078  Score=42.94  Aligned_cols=63  Identities=22%  Similarity=0.304  Sum_probs=46.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc---------------------cchHHHHHHHHHHhhhccCC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE---------------------EKGNEVAALVEKENAKFHSN   60 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~---------------------~~~~~~~~~l~~~~~~~~~~   60 (85)
                      |. ++.++|.|+ +|+|..+++.|+..|. ++.++|++.                     .+.+.+.+.+.+.++..+  
T Consensus        22 L~-~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~--   97 (338)
T PRK12475         22 IR-EKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVE--   97 (338)
T ss_pred             hc-CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcE--
Confidence            45 678999987 8899999999999997 788888863                     244555666666555433  


Q ss_pred             CCCCceEEEEecCC
Q 034737           61 LGFPSAMFIRCDVT   74 (85)
Q Consensus        61 ~~~~~~~~~~~Dv~   74 (85)
                           +..+..|++
T Consensus        98 -----i~~~~~~~~  106 (338)
T PRK12475         98 -----IVPVVTDVT  106 (338)
T ss_pred             -----EEEEeccCC
Confidence                 666666765

>PRK04148 hypothetical protein; Provisional

Probab=97.64  E-value=0.00022  Score=39.80  Aligned_cols=55  Identities=18%  Similarity=0.112  Sum_probs=42.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTK   77 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~   77 (85)
                      ++.++..|++  .|..++..|.+.|++|+.+|.++...+.+.+.      .         +.++..|+.+++
T Consensus        17 ~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~---------~~~v~dDlf~p~   71 (134)
T PRK04148         17 NKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------G---------LNAFVDDLFNPN   71 (134)
T ss_pred             CCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------C---------CeEEECcCCCCC
Confidence            4678888876  66788999999999999999999755444332      1         678889998765

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.63  E-value=0.00043  Score=38.85  Aligned_cols=45  Identities=29%  Similarity=0.440  Sum_probs=37.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      ++.++++|+ +++|..+++.|...| ..|.+++|+.++.+...+.+.
T Consensus        19 ~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~   64 (155)
T cd01065          19 GKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG   64 (155)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            678999988 899999999999986 789999999877777665554

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.63  E-value=0.00017  Score=42.43  Aligned_cols=54  Identities=13%  Similarity=0.115  Sum_probs=43.5

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      .+-|.|+++-.|..+++....+|+.|+.+.|++.+......                 +...+.|+.|+.+
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~-----------------~~i~q~Difd~~~   55 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQG-----------------VTILQKDIFDLTS   55 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccccc-----------------ceeecccccChhh
Confidence            36678999999999999999999999999999876544311                 5567777777776

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.61  E-value=0.00033  Score=44.96  Aligned_cols=72  Identities=17%  Similarity=0.201  Sum_probs=58.7

Q ss_pred             EEEEecCCChHHHHHHHHHHh----CCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            8 SAFVTGGASGIGRALSLALAG----KGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~----~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      -++|-|+++.-|.-+++.+..    .+..+.+..||+.++++..+.+.+..+.     +-+...++.+|.+|+++ .+++
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~-----~ls~~~i~i~D~~n~~Sl~ema   81 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGT-----DLSSSVILIADSANEASLDEMA   81 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCC-----CcccceEEEecCCCHHHHHHHH
Confidence            489999999999999999998    7788999999999998888777665432     12224489999999999 9887


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      ++
T Consensus        82 k~   83 (423)
T KOG2733|consen   82 KQ   83 (423)
T ss_pred             hh
Confidence            64

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=97.60  E-value=0.00056  Score=49.92  Aligned_cols=69  Identities=10%  Similarity=0.062  Sum_probs=44.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC----CEEEEEecCccchHH---HHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG----VFVTVVDLSEEKGNE---VAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g----~~v~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      .+++++||+++.||.+++++|+..+    ++|++..|+......   +...+...+. .. .....++.++.+|++++
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~-~~-~~~~~~i~~~~gDl~~~ 1046 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGI-WD-EEWASRIEVVLGDLSKE 1046 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCC-Cc-hhhhcceEEEeccCCCc
Confidence            4789999999999999999999887    688888887543222   2111111110 00 00112488999999754

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.56  E-value=0.00056  Score=44.62  Aligned_cols=59  Identities=20%  Similarity=0.268  Sum_probs=44.2

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      .++|.|+ +.+|+.+++.|..+|+.+++++++++..+...+..     .         +.++.+|.+++.. +++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~-----~---------~~~~~gd~~~~~~l~~~   61 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL-----D---------VRTVVGNGSSPDVLREA   61 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc-----C---------EEEEEeCCCCHHHHHHc
Confidence            5788887 99999999999999999999999987655543311     1         5666777776665 443

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.50  E-value=0.00051  Score=45.59  Aligned_cols=45  Identities=18%  Similarity=0.340  Sum_probs=38.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~   49 (85)
                      +. ++.++++|+ +|+|++++..|...|++|++.+|+.++.+.+.+.
T Consensus       330 ~~-~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        330 LN-NQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             cC-CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            45 789999996 7999999999999999999999988766665544

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.47  E-value=0.0014  Score=40.87  Aligned_cols=47  Identities=23%  Similarity=0.301  Sum_probs=40.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      ++.++|.|+ ||.|++++..|...|+ +|.+++|+.++.+.+.+.+...
T Consensus       127 ~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~  174 (284)
T PRK12549        127 LERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR  174 (284)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence            678999977 8899999999999997 7999999998888888777543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.41  E-value=0.00033  Score=42.25  Aligned_cols=29  Identities=21%  Similarity=0.322  Sum_probs=24.5

Q ss_pred             EEec-CCChHHHHHHHHHHhCCCEEEEEec
Q 034737           10 FVTG-GASGIGRALSLALAGKGVFVTVVDL   38 (85)
Q Consensus        10 litG-~~~gig~~~~~~l~~~g~~v~~~~~   38 (85)
                      .||. +++|||++++++|+.+|++|+++++
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~   47 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTT   47 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcC
Confidence            3444 5679999999999999999998875

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.37  E-value=0.0027  Score=37.62  Aligned_cols=35  Identities=34%  Similarity=0.582  Sum_probs=29.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS   39 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~   39 (85)
                      |. ++.++|.|+ +|+|..+++.|+..|. ++.++|.+
T Consensus        19 l~-~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        19 LL-NSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             hc-CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence            44 677888875 8999999999999997 78888876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.33  E-value=0.0016  Score=44.60  Aligned_cols=29  Identities=21%  Similarity=0.261  Sum_probs=26.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEE
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVT   34 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~   34 (85)
                      .+.++|||++|.||+++++.|..+|+.|.
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~  408 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYE  408 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEE
Confidence            45799999999999999999999999884

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.31  E-value=0.0046  Score=39.50  Aligned_cols=35  Identities=31%  Similarity=0.451  Sum_probs=30.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS   39 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~   39 (85)
                      |. .+.++|.|+ +|+|..+++.|+..|. ++.++|.+
T Consensus        22 L~-~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         22 LR-EKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             hc-CCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            44 677899987 8999999999999998 79999876

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=97.30  E-value=0.0018  Score=42.93  Aligned_cols=67  Identities=13%  Similarity=0.215  Sum_probs=43.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC---EEEEEecCcc---chHHHHHH--------HHHHhhhccCCCCCCceEEEEe
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV---FVTVVDLSEE---KGNEVAAL--------VEKENAKFHSNLGFPSAMFIRC   71 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~---~v~~~~~~~~---~~~~~~~~--------l~~~~~~~~~~~~~~~~~~~~~   71 (85)
                      +|++++||++|++|+.+.+.|++.-.   ++.+.-|...   ..++...+        +.+.++.     -..++..+.+
T Consensus        12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~-----~l~Kv~pi~G   86 (467)
T KOG1221|consen   12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPE-----ALEKVVPIAG   86 (467)
T ss_pred             CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCcc-----ceecceeccc
Confidence            89999999999999999999998654   4566655432   22222222        2222111     2245888888


Q ss_pred             cCCCHH
Q 034737           72 DVTNTK   77 (85)
Q Consensus        72 Dv~~~~   77 (85)
                      |+++++
T Consensus        87 Di~~~~   92 (467)
T KOG1221|consen   87 DISEPD   92 (467)
T ss_pred             cccCcc
Confidence            988754

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.26  E-value=0.0028  Score=35.70  Aligned_cols=43  Identities=23%  Similarity=0.281  Sum_probs=36.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|.+.-.|+.++..|.++|+.|.+++++...++.
T Consensus        25 ~~~-gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          25 RLD-GKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            467 9999999999999999999999999999999865544443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.24  E-value=0.0032  Score=41.14  Aligned_cols=59  Identities=22%  Similarity=0.380  Sum_probs=45.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      .+.++|.|+ +.+|+.+++.|...|+.|++++++++..+...+..    ..         +.++.+|.++++.
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~----~~---------~~~i~gd~~~~~~  289 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL----PN---------TLVLHGDGTDQEL  289 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC----CC---------CeEEECCCCCHHH
Confidence            568999988 89999999999999999999999987665544422    22         5567777777665

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.23  E-value=0.0024  Score=36.99  Aligned_cols=42  Identities=24%  Similarity=0.344  Sum_probs=35.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++. ++.++|.|++.-.|..+++.|..+|++|.++.|+.+.+.
T Consensus        41 ~l~-gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~   82 (168)
T cd01080          41 DLA-GKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLK   82 (168)
T ss_pred             CCC-CCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHH
Confidence            356 899999999666799999999999999999988864443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.22  E-value=0.0014  Score=44.10  Aligned_cols=56  Identities=18%  Similarity=0.264  Sum_probs=42.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      .+++|.|+ +.+|+.+++.|.++|.+++++|.|+++.+...+    .  .         ...+.+|.+|++.
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~--g---------~~~i~GD~~~~~~  473 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----R--G---------IRAVLGNAANEEI  473 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----C--C---------CeEEEcCCCCHHH
Confidence            35677766 788999999999999999999999876665543    1  1         5667777777665

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.22  E-value=0.0022  Score=38.35  Aligned_cols=42  Identities=33%  Similarity=0.388  Sum_probs=35.6

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~   49 (85)
                      .+.|.|+++.+|.+++..|.+.|++|++.+|++++.+.....
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            477888889999999999999999999999988776665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK06849 hypothetical protein; Provisional

Probab=97.19  E-value=0.0024  Score=41.16  Aligned_cols=36  Identities=17%  Similarity=0.173  Sum_probs=33.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      .++++|||+...++..+++.|.+.|++|++++.++.
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~   39 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKY   39 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            679999999999999999999999999999988754

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=97.14  E-value=0.002  Score=36.88  Aligned_cols=43  Identities=35%  Similarity=0.562  Sum_probs=35.8

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      ++++|..+-+|++++..|+++|.+|+++  +.+..+.+..++...
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~~   43 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPEE   43 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCHH
Confidence            4789999999999999999999999888  556677777666543

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.14  E-value=0.0024  Score=39.85  Aligned_cols=40  Identities=20%  Similarity=0.190  Sum_probs=34.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      +. +++++|.|. +++|+.+++.|...|++|++.+|+++...
T Consensus       149 l~-gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~  188 (287)
T TIGR02853       149 IH-GSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA  188 (287)
T ss_pred             CC-CCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            55 899999988 77999999999999999999999876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.13  E-value=0.0022  Score=40.25  Aligned_cols=43  Identities=23%  Similarity=0.324  Sum_probs=35.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +|.+++|+|+++++|..+++.....|++|+.+++++++.+.+.
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~  193 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLK  193 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            4789999999999999999888889999988888776544443

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.12  E-value=0.011  Score=34.76  Aligned_cols=34  Identities=29%  Similarity=0.443  Sum_probs=26.6

Q ss_pred             CcEEEEecCC----------------ChHHHHHHHHHHhCCCEEEEEecC
Q 034737            6 GLSAFVTGGA----------------SGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         6 ~~~~litG~~----------------~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ||.++||+|+                |-.|.++++.+..+|++|+++...
T Consensus         3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~   52 (185)
T PF04127_consen    3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGP   52 (185)
T ss_dssp             T-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-T
T ss_pred             CCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecC
Confidence            7788888765                569999999999999999888654

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.11  E-value=0.0032  Score=39.15  Aligned_cols=47  Identities=34%  Similarity=0.458  Sum_probs=39.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~   51 (85)
                      +. ++.++|.|+ +|.+++++..|...|+ +|.++.|+.++.+.+.+.+.
T Consensus       123 ~~-~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       123 LA-GFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             cC-CceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            34 788888876 8999999999999997 69999999888888776653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.05  E-value=0.0038  Score=38.98  Aligned_cols=48  Identities=33%  Similarity=0.533  Sum_probs=41.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKEN   54 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~   54 (85)
                      ++.++|.|+ +|-+++++..|+..|+ +|.++.|+.++++++.+.+...+
T Consensus       126 ~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~  174 (283)
T COG0169         126 GKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG  174 (283)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc
Confidence            678999976 8889999999999995 79999999999999988887554

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.04  E-value=0.0031  Score=39.40  Aligned_cols=42  Identities=24%  Similarity=0.210  Sum_probs=34.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|+|+++++|..+++.....|++|+.+++++++.+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~  179 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL  179 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999988888999998888776554433

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.04  E-value=0.0048  Score=38.63  Aligned_cols=40  Identities=28%  Similarity=0.387  Sum_probs=35.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      ++. |+.++|.|.+.-+|+.++..|..+|+.|+++.+....
T Consensus       155 ~l~-Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~  194 (286)
T PRK14175        155 DLE-GKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKD  194 (286)
T ss_pred             CCC-CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchh
Confidence            467 9999999999999999999999999999988876543

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.03  E-value=0.002  Score=42.08  Aligned_cols=43  Identities=21%  Similarity=0.360  Sum_probs=38.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      -..++|+|++|.+|+.+++.|.++|..|..+-|+.++.+....
T Consensus        79 ~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~  121 (411)
T KOG1203|consen   79 PTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG  121 (411)
T ss_pred             CCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence            4589999999999999999999999999999999877666544

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=97.02  E-value=0.0048  Score=35.96  Aligned_cols=43  Identities=28%  Similarity=0.347  Sum_probs=33.5

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHH
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      +.|.|+ |-+|..++..++..|++|++.+++++.++...+.+..
T Consensus         2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            456666 8999999999999999999999998876666555543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.01  E-value=0.0031  Score=40.03  Aligned_cols=42  Identities=21%  Similarity=0.275  Sum_probs=35.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|.|+++++|...++.....|++|+.+++++++.+.+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~  199 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL  199 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            478999999999999999988888999998888777655444

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.01  E-value=0.0032  Score=39.49  Aligned_cols=41  Identities=22%  Similarity=0.100  Sum_probs=34.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVA   47 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~   47 (85)
                      .+++|+|+++++|...++.....|+ +|+.+++++++.+.+.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~  197 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLK  197 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence            7999999999999999888888898 7988888766554443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.98  E-value=0.0039  Score=38.16  Aligned_cols=39  Identities=36%  Similarity=0.409  Sum_probs=34.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG   43 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~   43 (85)
                      ++.+++|+|+++++|..+++.+...|++|++++++.+..
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~  177 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKL  177 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence            478999999999999999999999999998888775443

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.97  E-value=0.0049  Score=38.85  Aligned_cols=43  Identities=26%  Similarity=0.339  Sum_probs=36.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.+.+.|.++-+|+.++..|+++|+.|.++.+.......
T Consensus       156 ~l~-Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e  198 (301)
T PRK14194        156 DLT-GKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA  198 (301)
T ss_pred             CCC-CCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence            467 9999999999999999999999999999999776544333

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.97  E-value=0.0042  Score=38.62  Aligned_cols=41  Identities=24%  Similarity=0.216  Sum_probs=34.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++.+++|+|+++++|..+++.....|++|+.+++++++.+.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~  183 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAW  183 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            47899999999999999988888899999888877654433

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.96  E-value=0.0051  Score=38.38  Aligned_cols=45  Identities=29%  Similarity=0.466  Sum_probs=38.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~   51 (85)
                      ++.++|.|+ ||-+++++-.|+..|+ +|.++.|+.++.+.+.+.+.
T Consensus       127 ~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~  172 (283)
T PRK14027        127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVIN  172 (283)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            678999987 8899999999999997 68899999888888777654

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.95  E-value=0.014  Score=35.16  Aligned_cols=63  Identities=24%  Similarity=0.286  Sum_probs=43.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLG   62 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~   62 (85)
                      |. ++.++|.|+ +|+|..+++.|+..|. +++++|.+                   ..+.+.+.+.+.+.++..+    
T Consensus        19 L~-~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~----   92 (228)
T cd00757          19 LK-NARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVE----   92 (228)
T ss_pred             Hh-CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCE----
Confidence            44 678888875 8999999999999997 56677543                   2345666666666655432    


Q ss_pred             CCceEEEEecCC
Q 034737           63 FPSAMFIRCDVT   74 (85)
Q Consensus        63 ~~~~~~~~~Dv~   74 (85)
                         +..+..+++
T Consensus        93 ---i~~~~~~i~  101 (228)
T cd00757          93 ---IEAYNERLD  101 (228)
T ss_pred             ---EEEecceeC
Confidence               555555553

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.94  E-value=0.0049  Score=35.54  Aligned_cols=39  Identities=31%  Similarity=0.463  Sum_probs=30.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      .+. ||+++|.|- +-+|+.+|++|...|++|++++.++-.
T Consensus        20 ~l~-Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~   58 (162)
T PF00670_consen   20 MLA-GKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIR   58 (162)
T ss_dssp             --T-TSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHH
T ss_pred             eeC-CCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHH
Confidence            356 899999976 789999999999999999999999843

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.93  E-value=0.005  Score=39.40  Aligned_cols=44  Identities=30%  Similarity=0.308  Sum_probs=37.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      .+|+++.|+|.. |+|...++.....|++|+.+++++++.+.+.+
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~  208 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK  208 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH
Confidence            358999999997 99988888888899999999999987766554

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.93  E-value=0.023  Score=34.75  Aligned_cols=35  Identities=43%  Similarity=0.561  Sum_probs=29.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS   39 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~   39 (85)
                      |. ++.++|.|+ +|+|..+++.|+..|. ++.++|.+
T Consensus        30 L~-~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         30 LK-AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             hc-CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            44 678899988 9999999999999996 57777654

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.92  E-value=0.0036  Score=41.00  Aligned_cols=39  Identities=23%  Similarity=0.291  Sum_probs=34.2

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      |.+. ++.++|+|.+ ++|.++++.|..+|+.|.+.+....
T Consensus         1 ~~~~-~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          1 MTFQ-NKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCC-CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            6777 8999999975 8999999999999999999987654

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.91  E-value=0.005  Score=38.16  Aligned_cols=40  Identities=30%  Similarity=0.302  Sum_probs=34.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++..++|+|+++++|..+++.+...|.+|+++.+++++.+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~  201 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLK  201 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence            3678999999999999999999999999988887765433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.90  E-value=0.0045  Score=39.26  Aligned_cols=42  Identities=38%  Similarity=0.452  Sum_probs=33.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      +.++.++||+|+++|+|...++.....|+.++++..++++.+
T Consensus       140 l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~  181 (326)
T COG0604         140 LKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE  181 (326)
T ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence            445789999999999999999988889977666666554444

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.90  E-value=0.013  Score=37.84  Aligned_cols=50  Identities=26%  Similarity=0.388  Sum_probs=38.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAK   56 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~   56 (85)
                      ++.++|.|+ +|+|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++.
T Consensus       135 ~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~  204 (376)
T PRK08762        135 EARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPD  204 (376)
T ss_pred             cCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCC
Confidence            567777766 8999999999999998 68888886                   34566667777666554

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.90  E-value=0.0052  Score=37.67  Aligned_cols=41  Identities=24%  Similarity=0.285  Sum_probs=35.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      +++.++|+|+++++|..+++.+...|.+|+++++++++.+.
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  184 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAEL  184 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            47899999999999999999999999999998887654433

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.90  E-value=0.024  Score=31.29  Aligned_cols=61  Identities=21%  Similarity=0.339  Sum_probs=44.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPS   65 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~   65 (85)
                      ++.+++.|+ +++|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++..+       
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~-------   73 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVE-------   73 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSE-------
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCcee-------
Confidence            457888876 8999999999999998 68888763                   2356667777777665533       


Q ss_pred             eEEEEecCC
Q 034737           66 AMFIRCDVT   74 (85)
Q Consensus        66 ~~~~~~Dv~   74 (85)
                      +..+..+++
T Consensus        74 v~~~~~~~~   82 (135)
T PF00899_consen   74 VEAIPEKID   82 (135)
T ss_dssp             EEEEESHCS
T ss_pred             eeeeecccc
Confidence            677777773

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=96.89  E-value=0.0023  Score=38.66  Aligned_cols=32  Identities=19%  Similarity=0.239  Sum_probs=25.8

Q ss_pred             EEEEecCC-ChHHHHHHHHHHhCCCEEEEEecC
Q 034737            8 SAFVTGGA-SGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         8 ~~litG~~-~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      +-.||..+ |++|.++++.|+.+|++|++++++
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~   49 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTK   49 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECc
Confidence            44566544 459999999999999999998764

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.87  E-value=0.0062  Score=35.35  Aligned_cols=39  Identities=31%  Similarity=0.327  Sum_probs=33.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG   43 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~   43 (85)
                      +. ++++.|.|. |.||+.+++.+...|++|+..++.....
T Consensus        34 l~-g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~   72 (178)
T PF02826_consen   34 LR-GKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPE   72 (178)
T ss_dssp             ST-TSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHH
T ss_pred             cC-CCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChh
Confidence            56 899999976 8999999999999999999999987543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.86  E-value=0.00011  Score=44.36  Aligned_cols=30  Identities=23%  Similarity=0.401  Sum_probs=23.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCC
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKG   30 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g   30 (85)
                      |++..++++++||+++|||..++..+...+
T Consensus         1 m~~~~r~villTGaSrgiG~~~v~~i~aed   30 (253)
T KOG1204|consen    1 MDLNMRKVILLTGASRGIGTGSVATILAED   30 (253)
T ss_pred             CCcccceEEEEecCCCCccHHHHHHHHhcc
Confidence            555547899999999999988777766543

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.86  E-value=0.0071  Score=37.44  Aligned_cols=40  Identities=33%  Similarity=0.356  Sum_probs=34.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++..++|+|+++++|..+++.+...|++++++++++++.+
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~  205 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE  205 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            3778999999999999999999999999998888765443

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.85  E-value=0.022  Score=30.01  Aligned_cols=59  Identities=31%  Similarity=0.352  Sum_probs=41.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHh--CCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecC
Q 034737            5 PGLSAFVTGGASGIGRALSLALAG--KGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDV   73 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~--~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv   73 (85)
                      |+..++-.|++.|   .++..|++  .+.+|+.++.++...+.+.+........       +++.++..|+
T Consensus         1 p~~~vLDlGcG~G---~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-------~~i~~~~~d~   61 (112)
T PF12847_consen    1 PGGRVLDLGCGTG---RLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLS-------DRITFVQGDA   61 (112)
T ss_dssp             TTCEEEEETTTTS---HHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTT-------TTEEEEESCC
T ss_pred             CCCEEEEEcCcCC---HHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-------CCeEEEECcc
Confidence            4678888887766   23344444  7899999999998777777766332222       3388888888

...

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.84  E-value=0.0057  Score=35.19  Aligned_cols=43  Identities=28%  Similarity=0.456  Sum_probs=33.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|.+.-+|+.++..|.++++.|.++......+++
T Consensus        33 ~l~-Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   33 DLE-GKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             STT-T-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             CCC-CCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            466 9999999999999999999999999999998776554444

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.83  E-value=0.0053  Score=40.47  Aligned_cols=39  Identities=33%  Similarity=0.502  Sum_probs=33.3

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      .+.|.|+.|.+|..+++.|...|++|++.+|+++.....
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~   40 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV   40 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence            578899889999999999999999999999987654433

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.80  E-value=0.0081  Score=31.07  Aligned_cols=37  Identities=38%  Similarity=0.437  Sum_probs=31.1

Q ss_pred             CCChHHHHHHHHHHhCC---CEEEEE-ecCccchHHHHHHH
Q 034737           14 GASGIGRALSLALAGKG---VFVTVV-DLSEEKGNEVAALV   50 (85)
Q Consensus        14 ~~~gig~~~~~~l~~~g---~~v~~~-~~~~~~~~~~~~~l   50 (85)
                      |+|.+|.++++.|...|   .+|.++ .|++++.+.+.++.
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            66999999999999999   889855 89988777776654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.77  E-value=0.0068  Score=34.67  Aligned_cols=34  Identities=32%  Similarity=0.474  Sum_probs=30.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEe
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVD   37 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~   37 (85)
                      ++. |+.++|.|+ |.+|...++.|+..|++|.+++
T Consensus        10 ~l~-~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719         10 NLH-NKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             EcC-CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            466 899999987 7889999999999999998884

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.76  E-value=0.0057  Score=30.94  Aligned_cols=33  Identities=30%  Similarity=0.405  Sum_probs=21.4

Q ss_pred             cEEEEecCCChHHHHHHHHHH-hCCCEEEEEecC
Q 034737            7 LSAFVTGGASGIGRALSLALA-GKGVFVTVVDLS   39 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~-~~g~~v~~~~~~   39 (85)
                      |.+||+|+++|.|.+....++ ..|++.+.+...
T Consensus        40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE   73 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE   73 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred             ceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence            789999999999998544444 567777766543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.75  E-value=0.0018  Score=38.93  Aligned_cols=43  Identities=23%  Similarity=0.118  Sum_probs=33.7

Q ss_pred             HHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737           22 LSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus        22 ~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++++|+++|++|++++|+++..+     +               ..++++|++|.++ ++++++
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~---------------~~~~~~Dl~~~~~v~~~~~~   44 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L---------------DGFIQADLGDPASIDAAVAA   44 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h---------------hHhhcccCCCHHHHHHHHHH
Confidence            47889999999999999876431     0               2457899999999 888764

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.74  E-value=0.019  Score=34.20  Aligned_cols=37  Identities=22%  Similarity=0.317  Sum_probs=31.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++. ++.++|.|+ |.+|..-++.|++.|++|++++.+.
T Consensus         6 ~l~-gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~   42 (205)
T TIGR01470         6 NLE-GRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL   42 (205)
T ss_pred             EcC-CCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            466 899999987 7788999999999999999887654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.74  E-value=0.0073  Score=41.27  Aligned_cols=58  Identities=14%  Similarity=0.102  Sum_probs=44.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      .+++|.|. +.+|+.+++.|.++|..++++|.|++..+...+    .  .         ...+.+|.++++- ++
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~--g---------~~v~~GDat~~~~L~~  459 (601)
T PRK03659        401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRK----Y--G---------YKVYYGDATQLELLRA  459 (601)
T ss_pred             CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----C--C---------CeEEEeeCCCHHHHHh
Confidence            46777765 778999999999999999999999876665432    1  1         5678888888776 54

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.72  E-value=0.032  Score=34.04  Aligned_cols=50  Identities=26%  Similarity=0.346  Sum_probs=36.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc-------------------cchHHHHHHHHHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE-------------------EKGNEVAALVEKENAK   56 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~l~~~~~~   56 (85)
                      +..++|.|+ +|+|..+++.|+..|. +++++|.+.                   .+.+.+.+.+.+.++.
T Consensus        24 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~   93 (240)
T TIGR02355        24 ASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPH   93 (240)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCC
Confidence            567888876 8999999999999986 577776541                   3455556666666554

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.71  E-value=0.024  Score=33.92  Aligned_cols=33  Identities=30%  Similarity=0.527  Sum_probs=28.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLS   39 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~   39 (85)
                      ...++|.|+ +|+|..+++.|+..|.. ++++|.+
T Consensus        28 ~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         28 KAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            667888876 89999999999999974 8888876

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.71  E-value=0.0094  Score=39.13  Aligned_cols=39  Identities=26%  Similarity=0.382  Sum_probs=34.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      |++++|.|+ |.||+.++..+...|++|+++++++.+...
T Consensus       202 GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~  240 (413)
T cd00401         202 GKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQ  240 (413)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHH
Confidence            889999987 689999999999999999999988765444

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.71  E-value=0.013  Score=36.71  Aligned_cols=39  Identities=23%  Similarity=0.491  Sum_probs=34.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      ++. ||.++|.|.+.-.|+.++..|..+|+.|.++.....
T Consensus       154 ~l~-Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~  192 (285)
T PRK14191        154 EIK-GKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK  192 (285)
T ss_pred             CCC-CCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH
Confidence            466 999999999999999999999999999988765443

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.69  E-value=0.025  Score=36.60  Aligned_cols=41  Identities=20%  Similarity=0.327  Sum_probs=33.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++.++|.|+ |.+|...++.+...|++|+++++++++.+.+.
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~  207 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLD  207 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence            456788877 78999999999999999999999876655443

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.69  E-value=0.0034  Score=33.33  Aligned_cols=37  Identities=30%  Similarity=0.387  Sum_probs=31.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +++ ++.++|.|+ |.+|..-++.|++.|++|.++....
T Consensus         4 ~l~-~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLK-GKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --T-T-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcC-CCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            567 999999988 8899999999999999999998775

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.69  E-value=0.0082  Score=39.32  Aligned_cols=44  Identities=25%  Similarity=0.421  Sum_probs=36.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~   48 (85)
                      +. +++++|.|+ |.+|..+++.|...| .+|++++|+.++......
T Consensus       178 l~-~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~  222 (417)
T TIGR01035       178 LK-GKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAK  222 (417)
T ss_pred             cc-CCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence            44 789999987 999999999999999 689999998776555444

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.69  E-value=0.0089  Score=39.23  Aligned_cols=46  Identities=11%  Similarity=0.216  Sum_probs=38.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l   50 (85)
                      +. ++.+++.|+ |++|+.+++.|...|+ +++++.|+.++++.+.+.+
T Consensus       179 l~-~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        179 IS-SKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             cc-CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            45 889999988 9999999999999996 6888889887777666654

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.69  E-value=0.034  Score=33.04  Aligned_cols=33  Identities=24%  Similarity=0.488  Sum_probs=29.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS   39 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~   39 (85)
                      .+.++|.|+ +|+|..++..|+..|. +++++|.+
T Consensus        21 ~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            667888877 8999999999999998 69999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.68  E-value=0.0058  Score=36.32  Aligned_cols=36  Identities=17%  Similarity=0.364  Sum_probs=31.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++. +|.++|.|+ |.+|...++.|+..|++|+++.+.
T Consensus         7 ~l~-~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~   42 (202)
T PRK06718          7 DLS-NKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE   42 (202)
T ss_pred             EcC-CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence            467 999999988 889999999999999999888654

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.67  E-value=0.011  Score=39.05  Aligned_cols=39  Identities=23%  Similarity=0.348  Sum_probs=34.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG   43 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~   43 (85)
                      +. |++++|.|. |.||+.++..+...|++|+++++++.+.
T Consensus       210 l~-Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra  248 (425)
T PRK05476        210 IA-GKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA  248 (425)
T ss_pred             CC-CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence            45 899999997 7899999999999999999999887553

>PRK08223 hypothetical protein; Validated

Probab=96.66  E-value=0.024  Score=35.58  Aligned_cols=61  Identities=21%  Similarity=0.293  Sum_probs=42.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPS   65 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~   65 (85)
                      +..++|.|+ +|+|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++..+       
T Consensus        27 ~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~-------   98 (287)
T PRK08223         27 NSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELE-------   98 (287)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCE-------
Confidence            667888877 8999999999999997 57777664                   2345556666666555432       


Q ss_pred             eEEEEecCC
Q 034737           66 AMFIRCDVT   74 (85)
Q Consensus        66 ~~~~~~Dv~   74 (85)
                      +..+...++
T Consensus        99 V~~~~~~l~  107 (287)
T PRK08223         99 IRAFPEGIG  107 (287)
T ss_pred             EEEEecccC
Confidence            555555554

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.66  E-value=0.012  Score=36.86  Aligned_cols=42  Identities=24%  Similarity=0.377  Sum_probs=35.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++. ||+++|.|.+.-+|+.++..|..+|+.|.++......+.
T Consensus       155 ~l~-Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~  196 (285)
T PRK14189        155 PLR-GAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLA  196 (285)
T ss_pred             CCC-CCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHH
Confidence            466 999999999999999999999999999988765544333

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.62  E-value=0.033  Score=35.84  Aligned_cols=63  Identities=25%  Similarity=0.313  Sum_probs=45.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc-------------------cchHHHHHHHHHHhhhccCCCC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE-------------------EKGNEVAALVEKENAKFHSNLG   62 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~l~~~~~~~~~~~~   62 (85)
                      |. +..++|.|+ +|+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.++...    
T Consensus        26 L~-~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~----   99 (355)
T PRK05597         26 LF-DAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVK----   99 (355)
T ss_pred             Hh-CCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcE----
Confidence            44 678899987 8999999999999997 577777642                   356667777776666533    


Q ss_pred             CCceEEEEecCC
Q 034737           63 FPSAMFIRCDVT   74 (85)
Q Consensus        63 ~~~~~~~~~Dv~   74 (85)
                         +..+...++
T Consensus       100 ---v~~~~~~i~  108 (355)
T PRK05597        100 ---VTVSVRRLT  108 (355)
T ss_pred             ---EEEEEeecC
Confidence               555555555

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.61  E-value=0.015  Score=36.41  Aligned_cols=43  Identities=33%  Similarity=0.391  Sum_probs=36.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|.+.-+|+.++..|..+++.|.++.+....++.
T Consensus       156 ~l~-Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~  198 (285)
T PRK10792        156 DTY-GLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRH  198 (285)
T ss_pred             CCC-CCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHH
Confidence            466 9999999999999999999999999999988776544433

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.60  E-value=0.011  Score=36.38  Aligned_cols=39  Identities=26%  Similarity=0.302  Sum_probs=33.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      +.+++|+|+++++|..++..+...|+++++++++.++.+
T Consensus       145 ~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~  183 (328)
T cd08268         145 GDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD  183 (328)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            678999999999999999999999999998887765433

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.60  E-value=0.04  Score=35.72  Aligned_cols=63  Identities=24%  Similarity=0.323  Sum_probs=43.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLG   62 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~   62 (85)
                      |. +..++|.|+ +|+|..+++.|+..|. +++++|.+                   ..+.+.+.+.+.+.++..+    
T Consensus        39 l~-~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~----  112 (370)
T PRK05600         39 LH-NARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIR----  112 (370)
T ss_pred             hc-CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCe----
Confidence            44 667888876 8999999999999996 68888765                   2345555666665554422    


Q ss_pred             CCceEEEEecCC
Q 034737           63 FPSAMFIRCDVT   74 (85)
Q Consensus        63 ~~~~~~~~~Dv~   74 (85)
                         +..+...++
T Consensus       113 ---i~~~~~~i~  121 (370)
T PRK05600        113 ---VNALRERLT  121 (370)
T ss_pred             ---eEEeeeecC
Confidence               555555554

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.59  E-value=0.011  Score=38.84  Aligned_cols=45  Identities=33%  Similarity=0.479  Sum_probs=36.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~   49 (85)
                      +. +++++|.|+ |.+|..+++.|...|+ +|++++|+.++...+...
T Consensus       180 ~~-~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        180 LS-GKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             cc-CCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            45 788999977 9999999999999997 788999988766655544

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.59  E-value=0.011  Score=35.53  Aligned_cols=42  Identities=29%  Similarity=0.253  Sum_probs=31.0

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHH
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALV   50 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l   50 (85)
                      .+..+|++.||.+++++|...|+.|++..|+. +..+.+.+.+
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l   45 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAAL   45 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhh
Confidence            34456779999999999999999998886554 4444444443

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.56  E-value=0.022  Score=35.57  Aligned_cols=43  Identities=23%  Similarity=0.230  Sum_probs=34.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      +.+-|.|+ +-+|..++..++..|+.|++.+++++.++...+.+
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i   48 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRI   48 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence            35666665 78999999999999999999999998777655443

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.55  E-value=0.017  Score=36.25  Aligned_cols=40  Identities=30%  Similarity=0.341  Sum_probs=33.4

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      .+.|.| .|-+|.+++..|+..|++|++.+++++..+....
T Consensus         4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~   43 (308)
T PRK06129          4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPA   43 (308)
T ss_pred             EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHH
Confidence            577887 5789999999999999999999999876665443

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.55  E-value=0.012  Score=40.43  Aligned_cols=56  Identities=18%  Similarity=0.195  Sum_probs=43.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      +.++|.|+ +.+|+.+++.|.++|.++++++.|+++.+...+    .  .         ...+.+|.++++-
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~--g---------~~v~~GDat~~~~  456 (621)
T PRK03562        401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK----F--G---------MKVFYGDATRMDL  456 (621)
T ss_pred             CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----c--C---------CeEEEEeCCCHHH
Confidence            46777776 678999999999999999999999987666543    1  1         5667788887765

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.54  E-value=0.02  Score=42.57  Aligned_cols=70  Identities=16%  Similarity=0.154  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCcc---chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEE---KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +.|..+++|+-+|.|..++..|..+|++ +++..|+-=   ....+...++.++-.         +.+-..|++..+. .
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVq---------V~vsT~nitt~~ga~ 1837 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQ---------VQVSTSNITTAEGAR 1837 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeE---------EEEecccchhhhhHH
Confidence            4689999999999999999999999996 556666532   233455566666544         6666678887777 7


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      .+++
T Consensus      1838 ~Li~ 1841 (2376)
T KOG1202|consen 1838 GLIE 1841 (2376)
T ss_pred             HHHH
Confidence            7665

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.54  E-value=0.016  Score=36.48  Aligned_cols=38  Identities=26%  Similarity=0.448  Sum_probs=33.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSE   40 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~   40 (85)
                      ++. ||.+++.|.++-.|+.++..|+++|+.|.++. |..
T Consensus       155 ~~~-Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        155 DLS-GLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCC-CCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            466 99999999999999999999999999999885 543

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.52  E-value=0.0096  Score=36.70  Aligned_cols=34  Identities=24%  Similarity=0.430  Sum_probs=29.8

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      .++|+||++- |+.+++.|.+.|+.|+...+++..
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~   35 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEG   35 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCc
Confidence            5899999887 999999999999999988877643

This enzyme was found to be a monomer by gel filtration.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.50  E-value=0.013  Score=36.41  Aligned_cols=44  Identities=30%  Similarity=0.437  Sum_probs=36.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l   50 (85)
                      ++.++|.|+ +|-+++++..|...|+ +|.++.|+.++.+.+.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            457888875 8999999999999997 5999999998877776544

>PLN02494 adenosylhomocysteinase

Probab=96.49  E-value=0.016  Score=38.75  Aligned_cols=38  Identities=21%  Similarity=0.352  Sum_probs=33.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      +. |++++|.|. +.||+.+++.+...|++|+++++++.+
T Consensus       252 La-GKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        252 IA-GKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             cC-CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            45 899999987 599999999999999999999888754

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.48  E-value=0.015  Score=35.64  Aligned_cols=39  Identities=33%  Similarity=0.389  Sum_probs=33.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG   43 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~   43 (85)
                      ++.+++|+|+++++|..+.+.....|++|+++.++++..
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~  177 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKC  177 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            478999999999999999999999999998888776543

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.48  E-value=0.024  Score=35.28  Aligned_cols=41  Identities=22%  Similarity=0.177  Sum_probs=33.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      +.+.|.|+ +.+|..++..|+..|+.|++.+++++..+...+
T Consensus         5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (292)
T PRK07530          5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLA   45 (292)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            35666665 889999999999999999999999887766544

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.47  E-value=0.018  Score=36.18  Aligned_cols=37  Identities=27%  Similarity=0.222  Sum_probs=33.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG   43 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~   43 (85)
                      ++.++|.|. +++|+.++..|...|++|.+++|+++..
T Consensus       152 g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        152 GSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            889999997 6799999999999999999999987543

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.47  E-value=0.05  Score=31.58  Aligned_cols=31  Identities=29%  Similarity=0.548  Sum_probs=26.0

Q ss_pred             EEEecCCChHHHHHHHHHHhCCC-EEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~   40 (85)
                      ++|.|+ +|+|..+++.|+..|. ++.++|.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            566765 8999999999999998 488888764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.46  E-value=0.02  Score=35.87  Aligned_cols=42  Identities=17%  Similarity=0.321  Sum_probs=34.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++. ||.++|.|.+.-+|+.++..|.++++.|.++......+.
T Consensus       154 ~l~-Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~  195 (281)
T PRK14183        154 DVK-GKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLK  195 (281)
T ss_pred             CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence            467 999999999999999999999999999987754433333

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.46  E-value=0.021  Score=35.85  Aligned_cols=43  Identities=16%  Similarity=0.380  Sum_probs=35.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|.+.-+|+.++..|..+++.|.++......+..
T Consensus       161 ~l~-Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~  203 (287)
T PRK14176        161 DIE-GKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKK  203 (287)
T ss_pred             CCC-CCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHH
Confidence            456 9999999999999999999999999999888755444433

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.45  E-value=0.023  Score=35.39  Aligned_cols=40  Identities=30%  Similarity=0.346  Sum_probs=33.1

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      .+.|.|+ +-+|..++..|+..|++|++++++++..+...+
T Consensus         5 ~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~   44 (291)
T PRK06035          5 VIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKNAME   44 (291)
T ss_pred             EEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence            5666665 779999999999999999999999887765444

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.44  E-value=0.021  Score=35.85  Aligned_cols=42  Identities=21%  Similarity=0.271  Sum_probs=35.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++. ||.++|.|.+.-+|+.++..|..+++.|.++......++
T Consensus       152 ~l~-Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~  193 (287)
T PRK14173        152 PLA-GKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLP  193 (287)
T ss_pred             CCC-CCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            466 999999999999999999999999999988765544433

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.43  E-value=0.017  Score=38.62  Aligned_cols=39  Identities=26%  Similarity=0.369  Sum_probs=33.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      .+. ||+++|.|.+ .||+.+++++...|++|+++++++..
T Consensus       251 ~La-GKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~  289 (476)
T PTZ00075        251 MIA-GKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPIC  289 (476)
T ss_pred             CcC-CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            356 9999999975 69999999999999999999887654

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.42  E-value=0.016  Score=34.77  Aligned_cols=68  Identities=19%  Similarity=0.006  Sum_probs=43.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhcc----CCCCCCceEEEEecCCCH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFH----SNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~Dv~~~   76 (85)
                      +..+++.||+.|   .-+..|+.+|++|+.+|.++...+.+..+........+    .......+.++.+|+.+.
T Consensus        35 ~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  106 (213)
T TIGR03840        35 GARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFAL  106 (213)
T ss_pred             CCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCC
Confidence            568999999887   45778889999999999999877754332110000000    000123478888888754

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.42  E-value=0.054  Score=30.13  Aligned_cols=30  Identities=33%  Similarity=0.665  Sum_probs=25.4

Q ss_pred             EEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~   39 (85)
                      +++.|+ +|+|..+++.|+..|. ++.++|.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            677776 8999999999999998 68888754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.42  E-value=0.02  Score=35.82  Aligned_cols=38  Identities=26%  Similarity=0.415  Sum_probs=32.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .+. ||.++|.|.++-.|+.++..|...|+.|.++.+..
T Consensus       156 ~l~-Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t  193 (283)
T PRK14192        156 ELA-GKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT  193 (283)
T ss_pred             CCC-CCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            356 89999999977799999999999999988887743

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.42  E-value=0.015  Score=36.77  Aligned_cols=41  Identities=24%  Similarity=0.360  Sum_probs=34.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|.|+ +++|...+......|++|+++++++++.+.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4789999998 9999999998888999998888877655443

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.41  E-value=0.022  Score=35.72  Aligned_cols=43  Identities=19%  Similarity=0.315  Sum_probs=36.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|.+.-+|+.++..|..+++.|.++......++.
T Consensus       156 ~l~-Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~  198 (284)
T PRK14177        156 DVT-GKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPS  198 (284)
T ss_pred             CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            467 9999999999999999999999999999888755444433

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.41  E-value=0.025  Score=35.47  Aligned_cols=39  Identities=18%  Similarity=0.307  Sum_probs=34.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      ++. ||.++|.|.+.-+|+.++..|..+++.|.++.....
T Consensus       155 ~l~-Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~  193 (284)
T PRK14190        155 DIS-GKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK  193 (284)
T ss_pred             CCC-CCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch
Confidence            467 999999999999999999999999999988765443

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.38  E-value=0.024  Score=35.53  Aligned_cols=43  Identities=21%  Similarity=0.219  Sum_probs=36.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|.+.-+|+.++..|..+++.|.++......+..
T Consensus       155 ~l~-Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~  197 (282)
T PRK14180        155 KTE-GAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKS  197 (282)
T ss_pred             CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHH
Confidence            466 9999999999999999999999999999888665443433

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.38  E-value=0.024  Score=35.40  Aligned_cols=43  Identities=19%  Similarity=0.329  Sum_probs=36.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|.+.-+|+.++..|..+++.|.++......+..
T Consensus       155 ~l~-Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~  197 (278)
T PRK14172        155 DIE-GKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKE  197 (278)
T ss_pred             CCC-CCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            466 9999999999999999999999999999888755444444

>PLN00203 glutamyl-tRNA reductase

Probab=96.36  E-value=0.016  Score=39.07  Aligned_cols=46  Identities=26%  Similarity=0.328  Sum_probs=38.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l   50 (85)
                      +. ++.++|.|+ |.+|..+++.|...|+ +|+++.|+.++.+.+...+
T Consensus       264 l~-~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        264 HA-SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CC-CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            55 789999988 9999999999999997 6999999987776666543

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.35  E-value=0.019  Score=36.23  Aligned_cols=40  Identities=25%  Similarity=0.296  Sum_probs=32.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      +.+++|.|+ +++|...+..+...|+ +|+++++++++.+.+
T Consensus       170 g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a  210 (343)
T PRK09880        170 GKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA  210 (343)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH
Confidence            778999986 8999999988888898 588888887665543

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.34  E-value=0.025  Score=35.66  Aligned_cols=43  Identities=23%  Similarity=0.336  Sum_probs=35.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|.+.-+|+.++..|..+++.|.++......++.
T Consensus       155 ~l~-Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~  197 (297)
T PRK14186        155 DIA-GKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLAS  197 (297)
T ss_pred             CCC-CCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            466 9999999999999999999999999999888654443433

>PRK13256 thiopurine S-methyltransferase; Reviewed

Probab=96.33  E-value=0.024  Score=34.42  Aligned_cols=69  Identities=17%  Similarity=0.060  Sum_probs=46.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhcc--C--CCCCCceEEEEecCCCHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFH--S--NLGFPSAMFIRCDVTNTK   77 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~--~--~~~~~~~~~~~~Dv~~~~   77 (85)
                      +..+++.||+.|.   =+..|+.+|++|+.++.++...+...++........+  .  ...+..+.++.+|+.+..
T Consensus        44 ~~rvLvPgCGkg~---D~~~LA~~G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~l~  116 (226)
T PRK13256         44 SSVCLIPMCGCSI---DMLFFLSKGVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFNLP  116 (226)
T ss_pred             CCeEEEeCCCChH---HHHHHHhCCCcEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcCCC
Confidence            5689999999884   4678899999999999999877776553211100000  0  012234899999998753

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=96.33  E-value=0.022  Score=35.95  Aligned_cols=40  Identities=18%  Similarity=0.122  Sum_probs=32.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++.+++|.|+ +++|...+......|++|+.+++++++.+.
T Consensus       165 ~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~  204 (329)
T TIGR02822       165 PGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRL  204 (329)
T ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence            4779999997 899988887777789999888888766443

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.31  E-value=0.095  Score=31.05  Aligned_cols=33  Identities=21%  Similarity=0.419  Sum_probs=26.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLS   39 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~   39 (85)
                      +..++|.|+ +|+|..+++.|+..|.. +.++|.+
T Consensus        19 ~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          19 SAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             hCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            567888876 56999999999999974 7777654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.31  E-value=0.028  Score=37.25  Aligned_cols=46  Identities=37%  Similarity=0.398  Sum_probs=34.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEK   52 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~   52 (85)
                      ++.++|.|+ +++|.++++.|..+|++|.++++++. ......+.+..
T Consensus        16 ~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~   62 (480)
T PRK01438         16 GLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA   62 (480)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH
Confidence            778999986 77999999999999999999986553 23333344443

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.30  E-value=0.021  Score=35.49  Aligned_cols=40  Identities=23%  Similarity=0.200  Sum_probs=34.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      +.+++|.|+++++|..+++.....|++|+.+++++++.+.
T Consensus       146 ~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~  185 (329)
T cd05288         146 GETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRW  185 (329)
T ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            6789999999999999999999999999888877654443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.30  E-value=0.021  Score=36.04  Aligned_cols=44  Identities=27%  Similarity=0.426  Sum_probs=35.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l   50 (85)
                      ++.++|.|+ |.+|..+++.|...| .+|++++|++++...+.+.+
T Consensus       178 ~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~  222 (311)
T cd05213         178 GKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL  222 (311)
T ss_pred             CCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence            788999987 999999999999866 57888999887666555543

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.29  E-value=0.028  Score=35.26  Aligned_cols=42  Identities=19%  Similarity=0.298  Sum_probs=35.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++. ||.++|.|.+.-+|+.++..|.++++.|.++......++
T Consensus       154 ~l~-Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~  195 (284)
T PRK14170        154 QIE-GKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLP  195 (284)
T ss_pred             CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            466 999999999999999999999999999988765444333

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.28  E-value=0.024  Score=35.20  Aligned_cols=40  Identities=23%  Similarity=0.220  Sum_probs=33.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      +.+++|.|+++++|..+++.....|++|+++++++++.+.
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~  186 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADY  186 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence            5689999999999999999999999999888877655443

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB

Probab=96.27  E-value=0.064  Score=31.81  Aligned_cols=58  Identities=28%  Similarity=0.253  Sum_probs=40.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      ...+|=.||+.|   .=+..|+++|+.|..+|.++..++.+.......+..         +.+...|+.+
T Consensus        31 ~g~~LDlgcG~G---RNalyLA~~G~~VtAvD~s~~al~~l~~~a~~~~l~---------i~~~~~Dl~~   88 (192)
T PF03848_consen   31 PGKALDLGCGEG---RNALYLASQGFDVTAVDISPVALEKLQRLAEEEGLD---------IRTRVADLND   88 (192)
T ss_dssp             SSEEEEES-TTS---HHHHHHHHTT-EEEEEESSHHHHHHHHHHHHHTT-T---------EEEEE-BGCC
T ss_pred             CCcEEEcCCCCc---HHHHHHHHCCCeEEEEECCHHHHHHHHHHHhhcCce---------eEEEEecchh
Confidence            456777787766   347789999999999999998888876655544443         6667777654

When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.26  E-value=0.031  Score=35.00  Aligned_cols=42  Identities=17%  Similarity=0.287  Sum_probs=35.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++. ||.++|.|.+.-+|+.++..|..+++.|.++......++
T Consensus       153 ~l~-Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~  194 (282)
T PRK14169        153 DVA-GKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLK  194 (282)
T ss_pred             CCC-CCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            466 999999999999999999999999999988855443333

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.26  E-value=0.024  Score=34.83  Aligned_cols=41  Identities=29%  Similarity=0.358  Sum_probs=35.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      +.+++|.|+++++|..++......|++++.+++++++.+.+
T Consensus       133 ~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  173 (305)
T cd08270         133 GRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL  173 (305)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            77999999999999999999999999999888876655444

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK07411 hypothetical protein; Validated

Probab=96.26  E-value=0.061  Score=35.08  Aligned_cols=62  Identities=21%  Similarity=0.316  Sum_probs=43.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPS   65 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~   65 (85)
                      ...++|.|+ +|+|..+++.|+..|. +++++|.+                   ..+.+.+.+.+.+.++..+       
T Consensus        38 ~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~-------  109 (390)
T PRK07411         38 AASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQ-------  109 (390)
T ss_pred             cCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCe-------
Confidence            567888877 8999999999999997 57777654                   2345566666766665533       


Q ss_pred             eEEEEecCCC
Q 034737           66 AMFIRCDVTN   75 (85)
Q Consensus        66 ~~~~~~Dv~~   75 (85)
                      +..+...++.
T Consensus       110 v~~~~~~~~~  119 (390)
T PRK07411        110 VDLYETRLSS  119 (390)
T ss_pred             EEEEecccCH
Confidence            6666655554

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.25  E-value=0.021  Score=34.16  Aligned_cols=40  Identities=30%  Similarity=0.363  Sum_probs=33.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++.+++|+|+++ +|..+++.+...|.+|+++++++++.+.
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~  173 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL  173 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence            377899999988 9999999999999999999887654433

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.24  E-value=0.03  Score=35.28  Aligned_cols=43  Identities=26%  Similarity=0.378  Sum_probs=36.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|.+.-+|+.++..|..+++.|.++......+..
T Consensus       157 ~l~-Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~  199 (294)
T PRK14187        157 NLS-GSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLAD  199 (294)
T ss_pred             CCC-CCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHH
Confidence            467 9999999999999999999999999999888765444433

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.23  E-value=0.027  Score=35.02  Aligned_cols=41  Identities=24%  Similarity=0.375  Sum_probs=34.3

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~   49 (85)
                      .+.|.|+ +-+|..++..|+..|++|++.+++++..+...+.
T Consensus         3 ~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~   43 (288)
T PRK09260          3 KLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQE   43 (288)
T ss_pred             EEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence            4667766 8899999999999999999999998877766543

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.23  E-value=0.054  Score=30.38  Aligned_cols=45  Identities=27%  Similarity=0.479  Sum_probs=37.7

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      .+.|.|+++.+|.+++..|+..+.  +++++|++++.++....++..
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~   48 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSH   48 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhh
Confidence            478999999999999999998864  799999998877776666654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.22  E-value=0.027  Score=35.33  Aligned_cols=35  Identities=31%  Similarity=0.456  Sum_probs=32.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEe
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVD   37 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~   37 (85)
                      ++. ||.+++.|.++-.|+.++..|+++|+.|.++.
T Consensus       155 ~l~-Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~  189 (284)
T PRK14179        155 ELE-GKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH  189 (284)
T ss_pred             CCC-CCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC
Confidence            466 99999999999999999999999999998873

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=96.21  E-value=0.031  Score=35.27  Aligned_cols=43  Identities=30%  Similarity=0.336  Sum_probs=36.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|-+.-+|+.++..|..+++.|.++......++.
T Consensus       164 ~l~-Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~  206 (299)
T PLN02516        164 PIK-GKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPES  206 (299)
T ss_pred             CCC-CCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            467 9999999999999999999999999999888655444443

>PRK08328 hypothetical protein; Provisional

Probab=96.20  E-value=0.097  Score=31.75  Aligned_cols=33  Identities=27%  Similarity=0.421  Sum_probs=27.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS   39 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~   39 (85)
                      +..++|.|+ +|+|..+++.|+..|. ++.++|.+
T Consensus        27 ~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         27 KAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            567888876 8999999999999997 57788754

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.20  E-value=0.04  Score=34.24  Aligned_cols=41  Identities=24%  Similarity=0.319  Sum_probs=33.5

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~   49 (85)
                      .+.|.|+ +-+|..++..|+..|++|++.+++++..+...+.
T Consensus         5 kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~   45 (287)
T PRK08293          5 NVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKER   45 (287)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence            4666665 8899999999999999999999998776665544

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.17  E-value=0.023  Score=33.77  Aligned_cols=35  Identities=31%  Similarity=0.401  Sum_probs=32.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEe
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVD   37 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~   37 (85)
                      ++. ||.++|.|-+.-+|+.++..|+.+|+.|.+++
T Consensus        59 ~l~-GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~   93 (197)
T cd01079          59 RLY-GKTITIINRSEVVGRPLAALLANDGARVYSVD   93 (197)
T ss_pred             CCC-CCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence            477 99999999999999999999999999999885

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.17  E-value=0.071  Score=31.58  Aligned_cols=50  Identities=16%  Similarity=0.302  Sum_probs=36.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAK   56 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~   56 (85)
                      ++.++|.|+ +|+|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++.
T Consensus        21 ~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~   90 (197)
T cd01492          21 SARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPR   90 (197)
T ss_pred             hCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCC
Confidence            567888875 6799999999999997 47777654                   12455566666666655

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=96.17  E-value=0.033  Score=36.59  Aligned_cols=38  Identities=21%  Similarity=0.387  Sum_probs=33.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      +. |++++|.|. |.||+.+++.+...|++|+++++++.+
T Consensus       193 l~-Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r  230 (406)
T TIGR00936       193 IA-GKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIR  230 (406)
T ss_pred             CC-cCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhh
Confidence            45 899999986 789999999999999999999888754

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.15  E-value=0.075  Score=33.79  Aligned_cols=60  Identities=22%  Similarity=0.333  Sum_probs=40.7

Q ss_pred             EEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCceEE
Q 034737            9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPSAMF   68 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   68 (85)
                      ++|.|+ ||+|-.+++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++..+       +..
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~-------V~~   73 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVK-------IVA   73 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCe-------EEE
Confidence            577775 9999999999999987 57777653                   1345555666665554432       666


Q ss_pred             EEecCCCH
Q 034737           69 IRCDVTNT   76 (85)
Q Consensus        69 ~~~Dv~~~   76 (85)
                      +..++.+.
T Consensus        74 ~~~~i~~~   81 (312)
T cd01489          74 YHANIKDP   81 (312)
T ss_pred             EeccCCCc
Confidence            66666653

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.15  E-value=0.028  Score=34.43  Aligned_cols=39  Identities=36%  Similarity=0.408  Sum_probs=33.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG   43 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~   43 (85)
                      ++..++|+|+++++|..++..+...|+.|+.++++.+..
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~  177 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKL  177 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHH
Confidence            367899999999999999999999999998888776443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.15  E-value=0.037  Score=34.66  Aligned_cols=43  Identities=23%  Similarity=0.414  Sum_probs=36.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|-+.-+|+.++..|..+++.|.++......++.
T Consensus       154 ~l~-Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~  196 (282)
T PRK14166        154 DLE-GKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSL  196 (282)
T ss_pred             CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            466 9999999999999999999999999999888665444433

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.14  E-value=0.037  Score=34.81  Aligned_cols=44  Identities=23%  Similarity=0.431  Sum_probs=36.8

Q ss_pred             EEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      .+.|.|+ +++|..++..|+..|  ..++++++++++.+....++..
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~   47 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLED   47 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHH
Confidence            4677775 899999999999998  5799999999888877777754

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=96.14  E-value=0.029  Score=35.11  Aligned_cols=47  Identities=21%  Similarity=0.325  Sum_probs=35.4

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc---cchHHHHHHHHHHhhh
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE---EKGNEVAALVEKENAK   56 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~---~~~~~~~~~l~~~~~~   56 (85)
                      ++|||++|-+|..+++.|. .+.+|+.+++..   .......+.+.+..+.
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~~Ditd~~~v~~~i~~~~PD   52 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAELDITDPDAVLEVIRETRPD   52 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCccccccChHHHHHHHHhhCCC
Confidence            8999999999999999999 678898887754   2344455555555444

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=96.13  E-value=0.029  Score=33.72  Aligned_cols=68  Identities=21%  Similarity=0.005  Sum_probs=43.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccC----CCCCCceEEEEecCCCH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHS----NLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~Dv~~~   76 (85)
                      +..+++.||+.|   .-+..|+.+|++|+.++.++...+.+..+..........    .....++.++.+|+.+.
T Consensus        38 ~~rvL~~gCG~G---~da~~LA~~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l  109 (218)
T PRK13255         38 GSRVLVPLCGKS---LDMLWLAEQGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL  109 (218)
T ss_pred             CCeEEEeCCCCh---HhHHHHHhCCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence            568999999877   557778899999999999998777653211100000000    00123478888888754

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.12  E-value=0.025  Score=35.16  Aligned_cols=65  Identities=22%  Similarity=0.214  Sum_probs=38.5

Q ss_pred             CCCCCcEEEEecCCC-hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            2 ELKPGLSAFVTGGAS-GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         2 ~l~~~~~~litG~~~-gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      .+.+|.++|=.||+- ++...++++.   |++|+.++.++++.+.+.+.+.+.+..       .++.+...|..+.
T Consensus        59 ~l~~G~~vLDiGcGwG~~~~~~a~~~---g~~v~gitlS~~Q~~~a~~~~~~~gl~-------~~v~v~~~D~~~~  124 (273)
T PF02353_consen   59 GLKPGDRVLDIGCGWGGLAIYAAERY---GCHVTGITLSEEQAEYARERIREAGLE-------DRVEVRLQDYRDL  124 (273)
T ss_dssp             T--TT-EEEEES-TTSHHHHHHHHHH-----EEEEEES-HHHHHHHHHHHHCSTSS-------STEEEEES-GGG-
T ss_pred             CCCCCCEEEEeCCCccHHHHHHHHHc---CcEEEEEECCHHHHHHHHHHHHhcCCC-------CceEEEEeecccc
Confidence            355688999999774 4444444443   899999999998888888877765532       1266777776653

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.11  E-value=0.03  Score=34.81  Aligned_cols=40  Identities=28%  Similarity=0.266  Sum_probs=33.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++..++|.|+++++|..+++.....|..|+.+++++++.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~  178 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE  178 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence            4778999999999999999988889999988887665433

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=96.10  E-value=0.017  Score=36.22  Aligned_cols=45  Identities=18%  Similarity=0.109  Sum_probs=37.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      ..++-|.|+++.|+..+++.|..++..+.++.|+.+..++....+
T Consensus       167 qatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~  211 (351)
T COG5322         167 QATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTL  211 (351)
T ss_pred             HCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhh
Confidence            568999999999999999999999999999998876655544443

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.09  E-value=0.034  Score=34.39  Aligned_cols=40  Identities=28%  Similarity=0.302  Sum_probs=34.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++..++|+|+++++|..+++.....|++|+.+++++++.+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~  181 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA  181 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            3678999999999999999999999999988887765443

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=96.08  E-value=0.041  Score=37.05  Aligned_cols=70  Identities=26%  Similarity=0.345  Sum_probs=47.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPS   65 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~   65 (85)
                      +..+|+.|+ ||||-.+.+-|+..|. .|.++|.+                   ++++..+.+....-+++.       +
T Consensus        12 ~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNRQFLFrkkhVgqsKA~vA~~~v~~Fnpn~-------~   83 (603)
T KOG2013|consen   12 SGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNRQFLFRKKHVGQSKATVAAKAVKQFNPNI-------K   83 (603)
T ss_pred             cCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhhhheeehhhcCchHHHHHHHHHHHhCCCC-------c
Confidence            456788876 8999999999999987 46677653                   123333333333333333       3


Q ss_pred             eEEEEecCCCHHH-HHHhh
Q 034737           66 AMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus        66 ~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +.++..++.+++. ..+|.
T Consensus        84 l~~yhanI~e~~fnv~ff~  102 (603)
T KOG2013|consen   84 LVPYHANIKEPKFNVEFFR  102 (603)
T ss_pred             eEeccccccCcchHHHHHH
Confidence            8999999999876 66665

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.07  E-value=0.054  Score=33.94  Aligned_cols=41  Identities=20%  Similarity=0.360  Sum_probs=33.4

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~   49 (85)
                      .+.|.|+ +.+|..++..|+..|+.|++++++++..+...+.
T Consensus         6 ~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~   46 (311)
T PRK06130          6 NLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGV   46 (311)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            4555655 7899999999999999999999998777666553

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.07  E-value=0.032  Score=34.55  Aligned_cols=41  Identities=17%  Similarity=0.293  Sum_probs=34.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++.+++|.|+++++|..+++.....|++++++.++.++.+.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~  179 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAE  179 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence            47789999999999999999999999999888776554333

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.05  E-value=0.12  Score=31.58  Aligned_cols=30  Identities=37%  Similarity=0.554  Sum_probs=24.0

Q ss_pred             EEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~   39 (85)
                      +++.| .||+|-.+++.|+..|. ++.++|.+
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56665 58999999999999987 57777664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.05  E-value=0.045  Score=34.31  Aligned_cols=42  Identities=21%  Similarity=0.332  Sum_probs=35.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++. ||.++|.|.+.-+|+.++..|.++++.|.++......++
T Consensus       154 ~l~-Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~  195 (282)
T PRK14182        154 DPK-GKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLA  195 (282)
T ss_pred             CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            466 999999999999999999999999999988765544443

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.03  E-value=0.049  Score=34.13  Aligned_cols=46  Identities=24%  Similarity=0.322  Sum_probs=35.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCcc---chHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEE---KGNEVAALV   50 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~---~~~~~~~~l   50 (85)
                      +. ++.++|.|+ +|-+++++-.|...|+ +|.++.|+++   +++.+.+.+
T Consensus       122 ~~-~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~  171 (288)
T PRK12749        122 IK-GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRV  171 (288)
T ss_pred             cC-CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHh
Confidence            34 788999987 6669999999999886 6889999854   556655544

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.02  E-value=0.043  Score=34.48  Aligned_cols=42  Identities=21%  Similarity=0.305  Sum_probs=35.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++. ||.++|.|.+.-+|+.++..|..+++.|.++......+.
T Consensus       156 ~l~-GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~  197 (288)
T PRK14171        156 NLT-GKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLS  197 (288)
T ss_pred             CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            466 999999999999999999999999999987764443333

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=96.02  E-value=0.029  Score=35.31  Aligned_cols=38  Identities=24%  Similarity=0.196  Sum_probs=32.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      |++. .+.+.|.|+ |.||..++..|.+.|++|.++.|+.
T Consensus         1 ~~~~-~m~I~IiG~-GaiG~~lA~~L~~~g~~V~~~~r~~   38 (313)
T PRK06249          1 MDSE-TPRIGIIGT-GAIGGFYGAMLARAGFDVHFLLRSD   38 (313)
T ss_pred             CCCc-CcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCC
Confidence            5666 567777754 9999999999999999999999975

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.02  E-value=0.038  Score=33.99  Aligned_cols=39  Identities=31%  Similarity=0.417  Sum_probs=33.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG   43 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~   43 (85)
                      ++.+++|.|+++++|..+++.....|++|+.+.+++++.
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~  180 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA  180 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            367999999999999999999999999998887776543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.99  E-value=0.087  Score=32.07  Aligned_cols=35  Identities=34%  Similarity=0.478  Sum_probs=28.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS   39 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~   39 (85)
                      |. +..++|.|+ +|+|..+++.|++.|. +++++|.+
T Consensus         9 L~-~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           9 LR-NAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             Hh-CCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            44 667888877 8999999999999997 67787754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.98  E-value=0.038  Score=35.55  Aligned_cols=42  Identities=26%  Similarity=0.324  Sum_probs=34.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|+|+++++|..++......|++++++++++++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            367999999999999999988888999988888776554433

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.98  E-value=0.12  Score=33.82  Aligned_cols=33  Identities=30%  Similarity=0.532  Sum_probs=27.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS   39 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~   39 (85)
                      +..++|.|+ +|+|..+++.|+..|. ++.++|.+
T Consensus        42 ~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         42 NARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            567888877 8999999999999987 57777654

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.97  E-value=0.037  Score=35.74  Aligned_cols=40  Identities=28%  Similarity=0.320  Sum_probs=33.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++.+++|.|+++++|..++..+...|+++++++++.++.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~  228 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE  228 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence            3679999999999999999988899999888877665433

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.95  E-value=0.052  Score=39.56  Aligned_cols=64  Identities=17%  Similarity=0.174  Sum_probs=47.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC-CE-------------EEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEe
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG-VF-------------VTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRC   71 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g-~~-------------v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   71 (85)
                      .|.++|.|+ |.+|+..++.|++.. +.             |.+.+++.+.++.+.+.+    ++         +.++..
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~---------~~~v~l  634 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----EN---------AEAVQL  634 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CC---------CceEEe
Confidence            457888886 999999999998753 23             777888876666555432    23         678999


Q ss_pred             cCCCHHH-HHHhh
Q 034737           72 DVTNTKF-ALAFL   83 (85)
Q Consensus        72 Dv~~~~~-~~~~~   83 (85)
                      |++|.++ .++++
T Consensus       635 Dv~D~e~L~~~v~  647 (1042)
T PLN02819        635 DVSDSESLLKYVS  647 (1042)
T ss_pred             ecCCHHHHHHhhc
Confidence            9999988 77644

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.93  E-value=0.032  Score=35.01  Aligned_cols=40  Identities=23%  Similarity=0.160  Sum_probs=32.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCccchHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEEKGNE   45 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~   45 (85)
                      ++.+++|+|+ +++|..+++.+...|++ |+++++++++.+.
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~  203 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLEL  203 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            3778999975 89999999988889998 8888887665443

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.92  E-value=0.14  Score=29.23  Aligned_cols=40  Identities=35%  Similarity=0.340  Sum_probs=31.8

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      .+-+.|. +-+|..++++|.+.|++|.+.+|++++.+++.+
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~   42 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE   42 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH
Confidence            3455555 789999999999999999999999877766654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=95.92  E-value=0.074  Score=33.73  Aligned_cols=47  Identities=19%  Similarity=0.381  Sum_probs=39.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      ++.+.|.|+ +.+|..++..++..+.  .+.++|++++.++....++...
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~   54 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHA   54 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhh
Confidence            678999997 9999999999998886  7999999988877777776643

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.92  E-value=0.14  Score=31.93  Aligned_cols=35  Identities=29%  Similarity=0.397  Sum_probs=28.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLS   39 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~   39 (85)
                      |. +..++|.|+ +|+|..+++.|++.| -++.++|.+
T Consensus        28 L~-~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         28 FA-DAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             hc-CCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            44 667888876 899999999999999 478888764

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=95.91  E-value=0.11  Score=32.00  Aligned_cols=53  Identities=21%  Similarity=0.453  Sum_probs=40.0

Q ss_pred             CCCCCcEEEEec-CCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhh
Q 034737            2 ELKPGLSAFVTG-GASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENA   55 (85)
Q Consensus         2 ~l~~~~~~litG-~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~   55 (85)
                      ++.||.+++=.| |+|++-.++++.+...| +|+-....++.++.+.+++...+.
T Consensus        37 ~i~pG~~VlEaGtGSG~lt~~l~r~v~p~G-~v~t~E~~~~~~~~A~~n~~~~gl   90 (247)
T PF08704_consen   37 DIRPGSRVLEAGTGSGSLTHALARAVGPTG-HVYTYEFREDRAEKARKNFERHGL   90 (247)
T ss_dssp             T--TT-EEEEE--TTSHHHHHHHHHHTTTS-EEEEEESSHHHHHHHHHHHHHTTC
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHhCCCe-EEEccccCHHHHHHHHHHHHHcCC
Confidence            455788999999 55678888888888777 899999999999999998887544

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.91  E-value=0.032  Score=35.59  Aligned_cols=37  Identities=19%  Similarity=0.230  Sum_probs=32.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      +. ||++.|.|. |.||+.+++.+...|++|+..++...
T Consensus       148 L~-gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        148 VY-GKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             CC-CCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            56 899999987 99999999999999999999888653

>PRK14851 hypothetical protein; Provisional

Probab=95.91  E-value=0.13  Score=36.06  Aligned_cols=70  Identities=11%  Similarity=0.140  Sum_probs=45.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLG   62 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~   62 (85)
                      |. +..++|.|+ +|+|..+++.|+..|. +++++|.+                   ..+.+.+.+.+.+.++..+    
T Consensus        41 L~-~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~----  114 (679)
T PRK14851         41 LA-EAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLE----  114 (679)
T ss_pred             Hh-cCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCe----
Confidence            44 678899985 8999999999999997 56777653                   1244445555555544432    


Q ss_pred             CCceEEEEecCCCHHH-HHHh
Q 034737           63 FPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus        63 ~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                         +..+...++ .+. .+++
T Consensus       115 ---I~~~~~~i~-~~n~~~~l  131 (679)
T PRK14851        115 ---ITPFPAGIN-ADNMDAFL  131 (679)
T ss_pred             ---EEEEecCCC-hHHHHHHH
Confidence               667776775 333 4444

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.89  E-value=0.086  Score=33.84  Aligned_cols=46  Identities=24%  Similarity=0.257  Sum_probs=36.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      ||+++-|+|..+ +|.--++.-..-|++|++++++..+.+++.+.|-
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG  226 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG  226 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC
Confidence            689999999866 8876666555679999999999877777776664

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=95.87  E-value=0.078  Score=33.05  Aligned_cols=40  Identities=18%  Similarity=0.139  Sum_probs=32.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +.+.|.|+ +-+|..++..|+..|+.|++.+++++..+...
T Consensus         5 ~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~   44 (295)
T PLN02545          5 KKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSRGL   44 (295)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence            45666665 88999999999999999999999987765433

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=95.87  E-value=0.047  Score=34.08  Aligned_cols=42  Identities=31%  Similarity=0.358  Sum_probs=35.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|.|+++.+|..+++.....|.+++.+++++++.+.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            367899999999999999999999999998888877655443

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.86  E-value=0.13  Score=32.84  Aligned_cols=38  Identities=29%  Similarity=0.389  Sum_probs=32.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      +. ++++.|.|. |.||+++++.|...|++|++.++++..
T Consensus       144 l~-g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        144 VK-NMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cC-CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            45 788888876 789999999999999999999987643

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.84  E-value=0.046  Score=34.66  Aligned_cols=34  Identities=29%  Similarity=0.280  Sum_probs=29.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++.+++|.|+ +++|...+..+...|++|++++++
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            3778999985 999999998888889999999873

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.84  E-value=0.048  Score=33.28  Aligned_cols=40  Identities=33%  Similarity=0.366  Sum_probs=33.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++..++|.|+++++|..+++.....|+.|+.+++++++.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~  175 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE  175 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            3778999999999999999999999999988877665433

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.82  E-value=0.042  Score=33.81  Aligned_cols=37  Identities=27%  Similarity=0.365  Sum_probs=29.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCccch
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEEKG   43 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~   43 (85)
                      +.+++|.|+ +++|...++.....|++ |+++++++++.
T Consensus       121 g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366       121 GRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR  158 (280)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            678899976 89999998888888986 77777766544

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.81  E-value=0.049  Score=33.78  Aligned_cols=40  Identities=33%  Similarity=0.424  Sum_probs=33.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++..++|.|+++++|..+++.....|+.++++.+++++.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~  179 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVD  179 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            3678999999999999999999999999877777665433

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.80  E-value=0.066  Score=33.61  Aligned_cols=42  Identities=26%  Similarity=0.370  Sum_probs=34.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHh--CCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAG--KGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~--~g~~v~~~~~~~~~~~   44 (85)
                      ++. ||.++|.|.+.-+|+.++..|.+  +++.|.++......++
T Consensus       155 ~l~-Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~  198 (284)
T PRK14193        155 ELA-GAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLA  198 (284)
T ss_pred             CCC-CCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHH
Confidence            466 99999999999999999999998  7888888765544333

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=95.79  E-value=0.057  Score=33.49  Aligned_cols=39  Identities=28%  Similarity=0.304  Sum_probs=33.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      +.+++|.|+++++|..+++.....|+++++++.++++.+
T Consensus       147 ~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~  185 (324)
T cd08288         147 DGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEAD  185 (324)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            568999999999999999998899999988877665443

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>PLN02928 oxidoreductase family protein

Probab=95.77  E-value=0.037  Score=35.54  Aligned_cols=36  Identities=31%  Similarity=0.288  Sum_probs=32.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +. ||++.|.|. |.||+.+++.+...|++|+..+++.
T Consensus       157 l~-gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        157 LF-GKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             CC-CCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            56 899999977 8999999999999999999998763

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=95.77  E-value=0.14  Score=30.68  Aligned_cols=65  Identities=23%  Similarity=0.224  Sum_probs=47.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCC
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVT   74 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~   74 (85)
                      ++.++..++-.|+++|...++.-+|......|+.+.+++.-.+.+.+.+...+.. +       +.++..|-.
T Consensus        69 ~l~pg~~VLeIGtGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~-n-------v~~~~gdg~  133 (209)
T PF01135_consen   69 DLKPGDRVLEIGTGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGID-N-------VEVVVGDGS  133 (209)
T ss_dssp             TC-TT-EEEEES-TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTH-S-------EEEEES-GG
T ss_pred             hcCCCCEEEEecCCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccC-c-------eeEEEcchh
Confidence            3456889999999999999999999977668999999998777777777765443 1       666766654

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK07877 hypothetical protein; Provisional

Probab=95.76  E-value=0.1  Score=36.69  Aligned_cols=70  Identities=20%  Similarity=0.196  Sum_probs=47.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCc------------------cchHHHHHHHHHHhhhccCCCC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSE------------------EKGNEVAALVEKENAKFHSNLG   62 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~------------------~~~~~~~~~l~~~~~~~~~~~~   62 (85)
                      |. +..++|.|+ + +|..++..|+..|.  +++++|.+.                  .+.+.+.+.+.+.++..+    
T Consensus       105 L~-~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~----  177 (722)
T PRK07877        105 LG-RLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLP----  177 (722)
T ss_pred             Hh-cCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCE----
Confidence            44 678999999 4 99999999999984  788887642                  244445555555554433    


Q ss_pred             CCceEEEEecCCCHHH-HHHhh
Q 034737           63 FPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus        63 ~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                         +..+...++ .+. .+++.
T Consensus       178 ---v~~~~~~i~-~~n~~~~l~  195 (722)
T PRK07877        178 ---VEVFTDGLT-EDNVDAFLD  195 (722)
T ss_pred             ---EEEEeccCC-HHHHHHHhc
Confidence               777777776 455 55543

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=95.75  E-value=0.051  Score=33.93  Aligned_cols=39  Identities=23%  Similarity=0.313  Sum_probs=31.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGN   44 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~   44 (85)
                      +.+++|.|+++++|..+++..... |++|+.+.+++++.+
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~  188 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQE  188 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHH
Confidence            679999999999999988777666 999988877665433

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.74  E-value=0.09  Score=33.35  Aligned_cols=37  Identities=14%  Similarity=0.155  Sum_probs=31.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      +. ++++.|.|. |.||+.+++.|...|++|+..++..+
T Consensus       134 l~-g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        134 RE-DFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             cC-CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            45 888888866 88999999999999999999887543

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.74  E-value=0.05  Score=30.92  Aligned_cols=38  Identities=34%  Similarity=0.355  Sum_probs=30.1

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +.|.|+ |.+|.+++..|..+|.+|.+..|+++..+.+.
T Consensus         2 I~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~   39 (157)
T PF01210_consen    2 IAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEIN   39 (157)
T ss_dssp             EEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence            345544 78899999999999999999999985554443

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.73  E-value=0.059  Score=33.83  Aligned_cols=41  Identities=22%  Similarity=0.287  Sum_probs=33.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|.| ++++|..++......|++|+.+++++++.+.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~  203 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA  203 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence            367899999 79999999998889999999888876554443

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=95.72  E-value=0.061  Score=33.30  Aligned_cols=39  Identities=28%  Similarity=0.362  Sum_probs=32.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      +..++|.|+++++|..++......|++|+++++++++.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~  185 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQAD  185 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            358999999999999999888889999988888765443

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=95.71  E-value=0.061  Score=34.85  Aligned_cols=43  Identities=28%  Similarity=0.386  Sum_probs=36.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|-+.-+|+.++..|.++++.|.++......++.
T Consensus       228 ~l~-GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~  270 (364)
T PLN02616        228 EIK-GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEE  270 (364)
T ss_pred             CCC-CCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHH
Confidence            466 9999999999999999999999999999888655444443

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.71  E-value=0.052  Score=30.29  Aligned_cols=34  Identities=29%  Similarity=0.358  Sum_probs=28.5

Q ss_pred             EEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737           10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus        10 litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      +|.|+ +.||..++-+|.+.|++|.+++|.+ .++.
T Consensus         2 ~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~   35 (151)
T PF02558_consen    2 LIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEA   35 (151)
T ss_dssp             EEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHH
T ss_pred             EEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHh
Confidence            45544 8899999999999999999999988 5555

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.71  E-value=0.058  Score=33.37  Aligned_cols=39  Identities=23%  Similarity=0.161  Sum_probs=33.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG   43 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~   43 (85)
                      ++.+++|.|+++++|..+++.....|++++++.+++++.
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~  176 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQV  176 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHH
Confidence            367899999999999999999999999998887766543

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.67  E-value=0.079  Score=33.33  Aligned_cols=42  Identities=26%  Similarity=0.301  Sum_probs=35.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHh----CCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAG----KGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~----~g~~v~~~~~~~~~~~   44 (85)
                      ++. ||.++|.|.+.-+|+.++..|..    +++.|.++......+.
T Consensus       154 ~l~-Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~  199 (286)
T PRK14184        154 SPA-GKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLA  199 (286)
T ss_pred             CCC-CCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHH
Confidence            466 99999999999999999999998    8899988876554333

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.66  E-value=0.074  Score=27.16  Aligned_cols=34  Identities=32%  Similarity=0.517  Sum_probs=29.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhC-CCEEEEEec
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGK-GVFVTVVDL   38 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~   38 (85)
                      +. ++++++.|+ +..|+.++..|... +.++.+.+|
T Consensus        21 ~~-~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LK-GKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CC-CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            45 789999999 99999999999998 567777777

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK14852 hypothetical protein; Provisional

Probab=95.64  E-value=0.14  Score=37.23  Aligned_cols=68  Identities=15%  Similarity=0.137  Sum_probs=45.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPS   65 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~   65 (85)
                      +..++|.|+ +|+|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++..+       
T Consensus       332 ~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~-------  403 (989)
T PRK14852        332 RSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLD-------  403 (989)
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCe-------
Confidence            667888875 8999999999999987 56666553                   2345556666666655533       


Q ss_pred             eEEEEecCCCHHH-HHHh
Q 034737           66 AMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus        66 ~~~~~~Dv~~~~~-~~~~   82 (85)
                      +..+...++ .+. .+++
T Consensus       404 I~~~~~~I~-~en~~~fl  420 (989)
T PRK14852        404 IRSFPEGVA-AETIDAFL  420 (989)
T ss_pred             EEEEecCCC-HHHHHHHh
Confidence            666655553 334 4444

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.63  E-value=0.091  Score=33.52  Aligned_cols=41  Identities=17%  Similarity=0.113  Sum_probs=32.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      +.+.|.|+ |-+|..++..|+..|+.|++.+++++..+....
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~   48 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRA   48 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            45556654 789999999999999999999999876555443

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=95.61  E-value=0.071  Score=34.35  Aligned_cols=42  Identities=26%  Similarity=0.338  Sum_probs=35.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++. ||.++|.|-+.-+|+.++..|.++++.|.++......++
T Consensus       211 ~l~-GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~  252 (345)
T PLN02897        211 EIA-GKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPE  252 (345)
T ss_pred             CCC-CCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHH
Confidence            466 999999999999999999999999999988865444343

>PLN02740 Alcohol dehydrogenase-like

Probab=95.61  E-value=0.057  Score=34.70  Aligned_cols=41  Identities=24%  Similarity=0.286  Sum_probs=33.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|.|+ +++|...+......|+ +|+.+++++++.+.+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a  239 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG  239 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence            4778999985 8999999998888998 588888877655544

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=95.60  E-value=0.065  Score=33.22  Aligned_cols=39  Identities=26%  Similarity=0.270  Sum_probs=31.7

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      .+.|.|+ |.+|..++..|.+.|++|.+++|+.+..+...
T Consensus         2 ~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~   40 (304)
T PRK06522          2 KIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALN   40 (304)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHH
Confidence            3677776 89999999999999999999999766555443

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.58  E-value=0.061  Score=33.06  Aligned_cols=44  Identities=30%  Similarity=0.407  Sum_probs=36.3

Q ss_pred             EEEecCCChHHHHHHHHHHhCC----CEEEEEecCccchHHHHHHHHH
Q 034737            9 AFVTGGASGIGRALSLALAGKG----VFVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g----~~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      +.|.|+++.+|..++..|+..+    ..++++|.++++++....++..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~   48 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQD   48 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHH
Confidence            3578887889999999999988    6899999998877777666653

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.57  E-value=0.07  Score=33.85  Aligned_cols=35  Identities=23%  Similarity=0.274  Sum_probs=31.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      +. ||++.|.|. |.||+.+++++...|++|+..++.
T Consensus       146 l~-gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        146 LE-GKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             cC-CCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            56 889999977 899999999999999999988875

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.57  E-value=0.053  Score=35.26  Aligned_cols=44  Identities=20%  Similarity=0.288  Sum_probs=33.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC---EEEEEecCccchHHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV---FVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~---~v~~~~~~~~~~~~~~~   48 (85)
                      ++.+++|.|+++++|...+......|.   +|+++++++++.+.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence            367899999999999998877666543   78888888776655443

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

Probab=95.57  E-value=0.065  Score=33.59  Aligned_cols=43  Identities=26%  Similarity=0.371  Sum_probs=36.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. |+.++|.|.+.=.|+.++..|+..++.|.++......+..
T Consensus       153 ~l~-Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~  195 (283)
T COG0190         153 DLR-GKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLAS  195 (283)
T ss_pred             CCC-CCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHH
Confidence            456 9999999999999999999999999999888665543333

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=95.56  E-value=0.046  Score=34.83  Aligned_cols=33  Identities=27%  Similarity=0.399  Sum_probs=28.6

Q ss_pred             EEEEecCCChHHHHHHHHHHhCC-------CEEEEEecCc
Q 034737            8 SAFVTGGASGIGRALSLALAGKG-------VFVTVVDLSE   40 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g-------~~v~~~~~~~   40 (85)
                      .++|||++|.+|.+++..|+..+       ..++++|+++
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~   43 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP   43 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence            58999999999999999999854       4799999855

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.55  E-value=0.067  Score=34.25  Aligned_cols=40  Identities=20%  Similarity=0.169  Sum_probs=31.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNE   45 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~   45 (85)
                      ++.+++|.|+ +++|...+......|+ +|+++++++++.+.
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~  225 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFEL  225 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            4778999975 8999999888888898 78888887655443

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=95.54  E-value=0.17  Score=31.97  Aligned_cols=59  Identities=24%  Similarity=0.311  Sum_probs=39.1

Q ss_pred             EEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCceEE
Q 034737            9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPSAMF   68 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   68 (85)
                      ++|.| .||+|-.+++.|+..|. ++.++|.+                   ..+++.+.+.+.+.++..+       +..
T Consensus         2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~-------I~~   73 (291)
T cd01488           2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVN-------VTP   73 (291)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCE-------EEE
Confidence            56666 48999999999999987 57777653                   1345555556665555432       566


Q ss_pred             EEecCCC
Q 034737           69 IRCDVTN   75 (85)
Q Consensus        69 ~~~Dv~~   75 (85)
                      +..++.+
T Consensus        74 ~~~~i~~   80 (291)
T cd01488          74 HFGKIQD   80 (291)
T ss_pred             EecccCc
Confidence            6666654

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PLN03139 formate dehydrogenase; Provisional

Probab=95.52  E-value=0.19  Score=32.89  Aligned_cols=37  Identities=24%  Similarity=0.219  Sum_probs=32.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++. ||++-|.|. |.||+.+++.|...|++|+..++..
T Consensus       196 ~L~-gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        196 DLE-GKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             CCC-CCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence            366 899999985 7899999999999999999888764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	85
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		7e-06
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		7e-06
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		4e-05
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		4e-05
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		7e-04

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAK 56
          G +  +TGG SGIGRA+S+A A +G  + +  L EE   NE    VEKE  K
Sbjct: 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK 98

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAK 56
          G +  +TGG SGIGRA+S+A A +G  + +  L EE   NE    VEKE  K
Sbjct: 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK 98

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G  A VTG A GIGRA + AL  KG  V +VD + E G +         A  H       
Sbjct: 7  GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQC-------KAALHEQFEPQK 59
Query: 66 AMFIRCDVTNTK 77
           +FI+CDV + +
Sbjct: 60 TLFIQCDVADQQ 71

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL--SEEKGNEVAALVEKENAKFHSNLGFPSA 66
          A VTGGA GIGR +S  LA  G  + V DL   EE+  E   L+E  + K         A
Sbjct: 5  AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK---------A 55
Query: 67 MFIRCDVTN 75
          +F+  DVT+
Sbjct: 56 VFVGLDVTD 64

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG  SGIGRA+S+ LAG+G  V   DL      E   L+    +K     G  +A  
Sbjct: 10 ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAF- 68
Query: 69 IRCDVTNTKFALAFL 83
           + DV+  + A   L
Sbjct: 69 -QADVSEARAARCLL 82

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	85
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-15
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-15
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	3e-15
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	5e-15
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	6e-15
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	8e-15
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-14
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-14
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-14
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	3e-14
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	4e-14
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	5e-14
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	9e-14
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-13
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-13
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-13
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-13
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	3e-13
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-13
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	4e-13
1xhl_A	297	Short-chain dehydrogenase/reductase family member	7e-13
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	9e-13
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-12
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-12
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-12
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-12
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-12
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-12
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-12
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	2e-12
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-12
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-12
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	3e-12
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-12
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	3e-12
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	3e-12
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	3e-12
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	3e-12
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	4e-12
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	4e-12
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	6e-12
3imf_A	257	Short chain dehydrogenase; structural genomics, in	6e-12
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	7e-12
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	1e-11
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-11
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-11
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-11
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-11
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-11
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-11
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-11
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-11
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	3e-11
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-11
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	4e-11
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	4e-11
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	4e-11
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	5e-11
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	5e-11
3cxt_A	291	Dehydrogenase with different specificities; rossma	5e-11
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	6e-11
1xq1_A	266	Putative tropinone reducatse; structural genomics,	6e-11
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	7e-11
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	7e-11
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	7e-11
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	7e-11
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	9e-11
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-10
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-10
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	1e-10
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	1e-10
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-10
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-10
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-10
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-10
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	2e-10
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-10
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-10
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	3e-10
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-10
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	4e-10
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	4e-10
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	4e-10
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-10
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	5e-10
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	6e-10
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	6e-10
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	6e-10
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	6e-10
3rih_A	293	Short chain dehydrogenase or reductase; structural	7e-10
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	9e-10
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-09
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-09
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-09
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-09
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-09
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-09
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-09
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-09
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-09
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	3e-09
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-09
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	3e-09
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-09
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	3e-09
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	3e-09
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	4e-09
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	4e-09
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	5e-09
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	5e-09
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	6e-09
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	6e-09
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	9e-09
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-08
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-08
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	2e-08
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	2e-08
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-08
4e4y_A	244	Short chain dehydrogenase family protein; structur	2e-08
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-08
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	3e-08
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	3e-08
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-08
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	3e-08
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	4e-08
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	4e-08
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	5e-08
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	5e-08
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-08
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	5e-08
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	6e-08
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	7e-08
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	8e-08
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-07
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-07
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-07
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-07
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-07
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-07
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-07
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-07
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	3e-07
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	3e-07
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	3e-07
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	3e-07
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	4e-07
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	4e-07
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-07
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	4e-07
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	6e-07
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-07
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	7e-07
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	8e-07
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-06
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-06
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-06
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-06
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-06
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-06
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-06
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-06
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-06
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	4e-06
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-06
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	5e-06
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	6e-06
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	8e-06
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-05
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-05
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-05
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	9e-05
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-04
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	3e-04
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-04
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-04
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-04
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	7e-04

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 67.3 bits (165), Expect = 2e-15
 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG A GIGRA + AL  KG  V +VD + E G +  A + ++             +F
Sbjct: 10 ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQ-------KTLF 62

Query: 69 IRCDVTN 75
          I+CDV +
Sbjct: 63 IQCDVAD 69

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 67.3 bits (165), Expect = 2e-15
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 13/76 (17%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
           + + G SA V+GGA G+G A    L   G+ V + DL+ EKG  +A             
Sbjct: 26 KQFE-GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALAD-----------E 73

Query: 61 LGFPSAMFIRCDVTNT 76
          LG   A F+  +VT+ 
Sbjct: 74 LG-NRAEFVSTNVTSE 88

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 66.8 bits (164), Expect = 3e-15
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTG    IG A +L LA +G  + ++D++ E   +  A V ++  +         A  
Sbjct: 10 CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE---------ARS 60

Query: 69 IRCDVTN 75
            CDVT+
Sbjct: 61 YVCDVTS 67

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 66.1 bits (162), Expect = 5e-15
 Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 13/77 (16%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M+LK      VTG +SG+G A++  LA +G  V  +DL    G E AA            
Sbjct: 3  MQLK-SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAA-----------E 50

Query: 61 LGFPSAMFIRCDVTNTK 77
          LG  +  F   DVTN  
Sbjct: 51 LG-AAVRFRNADVTNEA 66

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 66.1 bits (162), Expect = 6e-15
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 13/76 (17%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
            +K GL A +TGGASG+G A +  L G+G    ++DL    G   A             
Sbjct: 8  RSVK-GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK-----------K 55

Query: 61 LGFPSAMFIRCDVTNT 76
          LG  + +F   DVT+ 
Sbjct: 56 LG-NNCVFAPADVTSE 70

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 65.7 bits (161), Expect = 8e-15
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M       A +TG  SGIGRA +LALA  GV V  +  +  +  EVA  +     +    
Sbjct: 24 MNQP-SPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQ---- 78

Query: 61 LGFPSAMFIRCDVTN 75
               A+ +  DV++
Sbjct: 79 -----AIALEADVSD 88

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 65.2 bits (160), Expect = 1e-14
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTG  SGIGRA++   A     V  V+L E++ N++   +     +          + 
Sbjct: 10 VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE---------VLG 60

Query: 69 IRCDVTN 75
          ++ DV+ 
Sbjct: 61 VKADVSK 67

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 65.2 bits (160), Expect = 1e-14
 Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGGA  IG A   ALA  G  V + DL E    +    +  E               
Sbjct: 16 AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD---------VSS 66

Query: 69 IRCDVTN 75
          +  DVTN
Sbjct: 67 VVMDVTN 73

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 64.9 bits (159), Expect = 2e-14
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG +SGIGRA +L  A +G  V V   +     E+   +     +         A  
Sbjct: 11 AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE---------AAA 61

Query: 69 IRCDVTN 75
          +  DV +
Sbjct: 62 LAGDVGD 68

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 64.7 bits (158), Expect = 3e-14
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGGASGIG A +   A +G  + + D+ +    +    +  +            A  
Sbjct: 34 AVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD---------AHG 84

Query: 69 IRCDVTN 75
          + CDV +
Sbjct: 85 VVCDVRH 91

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 64.1 bits (157), Expect = 4e-14
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 7/67 (10%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TGG SG+GRA ++ LA +G  +++VD+S E      A V +              + 
Sbjct: 16 VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAE-------VLT 68

Query: 69 IRCDVTN 75
             DV++
Sbjct: 69 TVADVSD 75

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 63.3 bits (155), Expect = 5e-14
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M  +      VTG   GIG+A + ALA +G  V V D++ E    VA  +  +       
Sbjct: 5  MRFE-NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT---- 59

Query: 61 LGFPSAMFIRCDVTN 75
               A+ +  DV++
Sbjct: 60 -----AISVAVDVSD 69

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 62.9 bits (154), Expect = 9e-14
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 10/75 (13%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          + L  G  A +TG  +GIG+ +++  A  G  V V D++ +  N V   +++   +    
Sbjct: 7  LRLD-GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---- 61

Query: 61 LGFPSAMFIRCDVTN 75
               A   RCD+T+
Sbjct: 62 -----AFACRCDITS 71

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 62.5 bits (153), Expect = 1e-13
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG   GIG+A++L L   G  V + D ++     VA+ + +             A+ 
Sbjct: 5  ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH---------AVA 55

Query: 69 IRCDVTN 75
          ++ DV++
Sbjct: 56 VKVDVSD 62

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 62.2 bits (152), Expect = 2e-13
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 13/75 (17%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M+L       VTGG SGIGRA +   A  G +V V D++E+    VA             
Sbjct: 23 MDLN-QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE----------- 70

Query: 61 LGFPSAMFIRCDVTN 75
          +G   A  +R DV++
Sbjct: 71 IG-SKAFGVRVDVSS 84

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 61.7 bits (151), Expect = 2e-13
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 8/67 (11%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG +SG G A++     +G  V  +DLS E   E A       A           + 
Sbjct: 5  AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA--------DKVLR 56

Query: 69 IRCDVTN 75
          +R DV +
Sbjct: 57 VRADVAD 63

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 61.8 bits (151), Expect = 2e-13
 Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            ++G    +G  L+   A +G  + +   + E+  +VA  V     +         A+ 
Sbjct: 14 VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR---------ALS 64

Query: 69 IRCDVTN 75
          +  D+T+
Sbjct: 65 VGTDITD 71

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 61.4 bits (150), Expect = 3e-13
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 10/67 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TGGA GIG   +      G  V + D++++ G +V   +   +             F
Sbjct: 19 AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV----------ISF 68

Query: 69 IRCDVTN 75
          + CDVT 
Sbjct: 69 VHCDVTK 75

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 61.5 bits (150), Expect = 4e-13
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 8/67 (11%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGG +G+GR ++ AL+ +G  V +     +  +  A  +                  
Sbjct: 36 ALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN--------IVRA 87

Query: 69 IRCDVTN 75
          + CDV +
Sbjct: 88 VVCDVGD 94

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 61.3 bits (149), Expect = 4e-13
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          AFVTGGA+G+G  L   L  +G  V + D+ ++  ++  A +E E +        P  M 
Sbjct: 11 AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSG-------PEVMG 63

Query: 69 IRCDVTN 75
          ++ DV +
Sbjct: 64 VQLDVAS 70

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 60.7 bits (148), Expect = 7e-13
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 6/71 (8%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TG ++GIGR+ ++  A +G  VT+   +E++  E    + K                
Sbjct: 29 VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP------AEKINA 82

Query: 69 IRCDVTNTKFA 79
          +  DVT     
Sbjct: 83 VVADVTEASGQ 93

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 60.2 bits (147), Expect = 9e-13
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG ++GIG+ ++LA A  G  V V     +    VA  +     K         A+ 
Sbjct: 35 ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK---------ALP 85

Query: 69 IRCDVTN 75
          IRCDVT 
Sbjct: 86 IRCDVTQ 92

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 59.9 bits (146), Expect = 1e-12
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TG ++GIGR  ++  A +G  VT+   S E+  E   ++ K                
Sbjct: 9  VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS------EKQVNS 62

Query: 69 IRCDVTN 75
          +  DVT 
Sbjct: 63 VVADVTT 69

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 59.8 bits (146), Expect = 1e-12
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 10/75 (13%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
            L     A VTG A+GIGRA++   A  G  V V DL  E    VAA + +   K    
Sbjct: 8  FHLN-DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK---- 62

Query: 61 LGFPSAMFIRCDVTN 75
               A+ + C+VT+
Sbjct: 63 -----AIGLECNVTD 72

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 59.9 bits (146), Expect = 1e-12
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG ++GIGRA ++  A +G  VT+     E+  E    +              +   
Sbjct: 9  AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQ------NVNS 62

Query: 69 IRCDVTN 75
          +  DVT 
Sbjct: 63 VVADVTT 69

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 59.9 bits (146), Expect = 1e-12
 Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 13/67 (19%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTGG  GIG  +  A    G  V + D  E  G  +   +             P A+F
Sbjct: 12 VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-------------PGAVF 58

Query: 69 IRCDVTN 75
          I CDVT 
Sbjct: 59 ILCDVTQ 65

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 59.5 bits (145), Expect = 1e-12
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A V+GGA G+G +   A+  +G  V   D+ +E+G  +AA            L   +A +
Sbjct: 10 ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA-----------ELA-DAARY 57

Query: 69 IRCDVTN 75
          +  DVT 
Sbjct: 58 VHLDVTQ 64

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 59.4 bits (145), Expect = 1e-12
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 10/67 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TGG  GIG A++     +G  V +     + G + A  V   +             F
Sbjct: 9  AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQ----------IQF 58

Query: 69 IRCDVTN 75
           + D ++
Sbjct: 59 FQHDSSD 65

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 59.5 bits (145), Expect = 2e-12
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGG+ GIG A+   LAG G  V     +E++ +E   +  ++               
Sbjct: 24 ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN---------VEG 74

Query: 69 IRCDVTN 75
            CD+ +
Sbjct: 75 SVCDLLS 81

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG  +GIG A++  LA +G  V   D+  +  +  A             +G   A  
Sbjct: 32 AIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATK-----------IG-CGAAA 79

Query: 69 IRCDVTN 75
           R DV++
Sbjct: 80 CRVDVSD 86

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTGG SGIG+ ++  L   G  V +V  + +K       +E   A         +  +
Sbjct: 14 YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGG------AIRY 67

Query: 69 IRCDVTN 75
             D+TN
Sbjct: 68 EPTDITN 74

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 58.7 bits (143), Expect = 2e-12
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TGGA G+G   +      G  V + D+ +E+G   A             LG  +A +
Sbjct: 8  VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR-----------ELG-DAARY 55

Query: 69 IRCDVTN 75
             DVT 
Sbjct: 56 QHLDVTI 62

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 58.8 bits (143), Expect = 3e-12
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TG   GIGR  +   A     + + D+++    E AA  +   AK            
Sbjct: 34 VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK---------VHT 84

Query: 69 IRCDVTN 75
             D +N
Sbjct: 85 FVVDCSN 91

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 58.7 bits (143), Expect = 3e-12
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG  SGIGRA+S+ LAG+G  V   DL      E   L+    +K     G  +   
Sbjct: 10 ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG--NHAA 67

Query: 69 IRCDVTN 75
           + DV+ 
Sbjct: 68 FQADVSE 74

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 10/75 (13%)

Query: 6   GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG-NEVAALVEKENAKFHSNLGFP 64
           G +  +TGG SGIGRA+S+A A +G  + +  L EE   NE    VEKE  K        
Sbjct: 47  GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK-------- 98

Query: 65  SAMFIRCDVTNTKFA 79
             + +  D+++ +  
Sbjct: 99  -CVLLPGDLSDEQHC 112

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 58.7 bits (143), Expect = 3e-12
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG A GIGRA + A   +G  V + D+  E+  + AA            +G P+A  
Sbjct: 11 ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAA-----------EIG-PAAYA 58

Query: 69 IRCDVTN 75
          ++ DVT 
Sbjct: 59 VQMDVTR 65

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 58.8 bits (143), Expect = 3e-12
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG  SG+GRA+++ALAG G  V +     +   E AA +  +            A+ 
Sbjct: 31 AIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDD------------ALC 78

Query: 69 IRCDVTN 75
          +  DVT+
Sbjct: 79 VPTDVTD 85

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 58.7 bits (143), Expect = 3e-12
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG + GIG A++ A A  G  V +   S     +   L +              +  
Sbjct: 37 ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH---------SKA 87

Query: 69 IRCDVTN 75
           +C++++
Sbjct: 88 YKCNISD 94

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 19/67 (28%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGG+SGIG A+  AL   G  V  V L E+    V+                     
Sbjct: 17 AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD-------------------H 57

Query: 69 IRCDVTN 75
           + DVTN
Sbjct: 58 FKIDVTN 64

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 58.3 bits (142), Expect = 4e-12
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGGASG+G  +   L G+G  V   D++E  G ++AA            LG   +MF
Sbjct: 9  ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAA-----------ELG-ERSMF 56

Query: 69 IRCDVTN 75
          +R DV++
Sbjct: 57 VRHDVSS 63

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 57.9 bits (141), Expect = 6e-12
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 13/75 (17%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M L+ G  A +TG  SG G  ++   A  G  V +VD  +     VA             
Sbjct: 5  MSLE-GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG-----------E 52

Query: 61 LGFPSAMFIRCDVTN 75
          +G  +A+ +  D++ 
Sbjct: 53 IG-DAALAVAADISK 66

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 57.9 bits (141), Expect = 6e-12
 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TGG+SG+G+ ++   A +G  V +   ++EK  E    +E+   +          + 
Sbjct: 9  VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ---------ILT 59

Query: 69 IRCDVTN 75
          ++ DV N
Sbjct: 60 VQMDVRN 66

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 57.6 bits (140), Expect = 7e-12
 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 13/75 (17%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
           +L  G  A VTGG+ GIG A++ AL   G  V + DL       V A +E         
Sbjct: 8  FDLS-GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENG------- 59

Query: 61 LGFPSAMFIRCDVTN 75
                  +  DVT 
Sbjct: 60 -----GFAVEVDVTK 69

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 56.8 bits (138), Expect = 1e-11
 Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 16/77 (20%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          ME++    A VTGGASG+G A +  L   G  V V+D+  E        V  +       
Sbjct: 5  MEIR-DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED-------VVAD------- 49

Query: 61 LGFPSAMFIRCDVTNTK 77
          LG   A F   DVT+  
Sbjct: 50 LG-DRARFAAADVTDEA 65

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 56.9 bits (138), Expect = 1e-11
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 10/76 (13%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHS 59
            +    +A +TG  SGIG A++  LA  G  + +    + ++   V   V   ++    
Sbjct: 21 QSMM-TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS---- 75

Query: 60 NLGFPSAMFIRCDVTN 75
               + +    D+T 
Sbjct: 76 ----GTVLHHPADMTK 87

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 56.8 bits (138), Expect = 1e-11
 Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 11/69 (15%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL--SEEKGNEVAALVEKENAKFHSNLGFPSA 66
          A VTGGA GIGR +S  LA  G  + V DL   EE+  E   L+E  + K         A
Sbjct: 5  AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK---------A 55

Query: 67 MFIRCDVTN 75
          +F+  DVT+
Sbjct: 56 VFVGLDVTD 64

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG   GIG   S  LA  G  V + DL E      AA           ++G   A+ 
Sbjct: 14 AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAA-----------SVG-RGAVH 61

Query: 69 IRCDVTN 75
             D+TN
Sbjct: 62 HVVDLTN 68

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 9/68 (13%)

Query: 9  AFVTGGA-SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAM 67
            VT  A +GIG   +     +G  V + D  E +  E    +           G     
Sbjct: 25 VLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL--------GLGRVE 76

Query: 68 FIRCDVTN 75
           + CDVT+
Sbjct: 77 AVVCDVTS 84

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 56.5 bits (137), Expect = 2e-11
 Identities = 15/75 (20%), Positives = 22/75 (29%), Gaps = 9/75 (12%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M+L    +        GIG   S  L  + +   V+    E    +A L           
Sbjct: 1  MDLT-NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKV---- 55

Query: 61 LGFPSAMFIRCDVTN 75
              +  F   DVT 
Sbjct: 56 ----NITFHTYDVTV 66

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 56.3 bits (137), Expect = 2e-11
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 9/70 (12%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G +A VTGG+ GIG  +   LA  G  V     ++++ N+       +  K         
Sbjct: 9  GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK--------- 59

Query: 66 AMFIRCDVTN 75
               CD+++
Sbjct: 60 VEASVCDLSS 69

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 55.9 bits (136), Expect = 3e-11
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG A G+G A +  LA  G  V + D+      E    + ++    H          
Sbjct: 12 ALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAH---------G 62

Query: 69 IRCDVTN 75
          +  DVT+
Sbjct: 63 VAFDVTD 69

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 56.0 bits (136), Expect = 3e-11
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 8/71 (11%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTG + GIGR  ++  A  G  V ++  +EEK  +VA+ + +E              +
Sbjct: 15 ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE--------TGRQPQW 66

Query: 69 IRCDVTNTKFA 79
             D+      
Sbjct: 67 FILDLLTCTSE 77

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 56.0 bits (136), Expect = 3e-11
 Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 10/72 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
            +TG + GIG A +   A  G  V +    +    +E  A +  +            A 
Sbjct: 10 VLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGD---------AA 60

Query: 68 FIRCDVTNTKFA 79
          F   D+  ++  
Sbjct: 61 FFAADLATSEAC 72

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 55.6 bits (135), Expect = 4e-11
 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 14/70 (20%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G    +T  A GIG+A +LA A +G  V   D++E K  E+                 P 
Sbjct: 6  GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY--------------PG 51

Query: 66 AMFIRCDVTN 75
                DVT 
Sbjct: 52 IQTRVLDVTK 61

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 55.7 bits (135), Expect = 4e-11
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 13/75 (17%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M+L  G  A +TGGASG+GRAL      +G  V V+D S E+  E+              
Sbjct: 1  MKLT-GEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEV-----------A 48

Query: 61 LGFPSAMFIRCDVTN 75
           G  +A+ +  DV +
Sbjct: 49 HG-GNAVGVVGDVRS 62

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 55.6 bits (135), Expect = 4e-11
 Identities = 17/67 (25%), Positives = 23/67 (34%), Gaps = 7/67 (10%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGG+SGIG A    L   G  V       E+     + + +                
Sbjct: 11 AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPG-------ARLFA 63

Query: 69 IRCDVTN 75
            CDV +
Sbjct: 64 SVCDVLD 70

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 55.4 bits (134), Expect = 5e-11
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 3  LKPGL----SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFH 58
          L PGL     A VTGGA+GIG+A+   L   G  V +     E+    A  ++       
Sbjct: 11 LAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK 70

Query: 59 SNLGFPSAMFIRCDVTN 75
                  + I+C++ N
Sbjct: 71 QA----RVIPIQCNIRN 83

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 55.3 bits (134), Expect = 5e-11
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG + GIG A++  L   G  V +     EK   V   +     +         A  
Sbjct: 32 AVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGE---------AES 82

Query: 69 IRCDVTN 75
            CD+++
Sbjct: 83 HACDLSH 89

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 55.2 bits (134), Expect = 6e-11
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 11/67 (16%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TGGA+GIGRA++   A +G  + + DL      E  A +     +          + 
Sbjct: 10 AVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRR---------VLT 58

Query: 69 IRCDVTN 75
          ++CDV+ 
Sbjct: 59 VKCDVSQ 65

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 55.2 bits (134), Expect = 6e-11
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTGG  GIG A+    AG G  +     +E + NE  +  +K+  +            
Sbjct: 17 VLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ---------VTG 67

Query: 69 IRCDVTN 75
            CD + 
Sbjct: 68 SVCDASL 74

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 55.3 bits (134), Expect = 7e-11
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 21/79 (26%)

Query: 9   AFVTGGASGIGRALSLALAGKGVFVTVVDL------------SEEKGNEVAALVEKENAK 56
           AF+TG A G GR+ ++ LA +G  +  +D+            + +   E    VE    +
Sbjct: 31  AFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRR 90

Query: 57  FHSNLGFPSAMFIRCDVTN 75
                     +  + DV +
Sbjct: 91  ---------IIASQVDVRD 100

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 54.8 bits (133), Expect = 7e-11
 Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAM 67
            +TG ++G+G+++++  A +   V V   S E++ N V   ++K   +         A+
Sbjct: 10 VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE---------AI 60

Query: 68 FIRCDVTN 75
           ++ DVT 
Sbjct: 61 AVKGDVTV 68

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 54.9 bits (133), Expect = 7e-11
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 21/79 (26%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL------------SEEKGNEVAALVEKENAK 56
          AF+TG A G GRA ++ LA  G  +  VDL            + E+      LVE   ++
Sbjct: 16 AFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSR 75

Query: 57 FHSNLGFPSAMFIRCDVTN 75
                    +  + DV +
Sbjct: 76 ---------IVARQADVRD 85

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 54.9 bits (133), Expect = 7e-11
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M  +    A VTG  SGIG  ++  L  +G+ V V    EE        + +   +    
Sbjct: 17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE---- 72

Query: 61 LGFPSAMFIRCDVTNT 76
               A    CDV + 
Sbjct: 73 -----ADGRTCDVRSV 83

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 54.9 bits (133), Expect = 9e-11
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 11/76 (14%)

Query: 6   GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG--NEVAALVEKENAKFHSNLGF 63
              A VTGG SGIGRA ++A A +G  V +  L  E+    +V AL+E+   K       
Sbjct: 49  DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRK------- 101

Query: 64  PSAMFIRCDVTNTKFA 79
             A+ +  D+++  FA
Sbjct: 102 --AVLLPGDLSDESFA 115

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 54.6 bits (132), Expect = 1e-10
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          AFVTG +SGIG A++  LA +G+ V       +  +     +                  
Sbjct: 27 AFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD---------VDG 77

Query: 69 IRCDVTN 75
            CDVT+
Sbjct: 78 SSCDVTS 84

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 54.4 bits (132), Expect = 1e-10
 Identities = 17/67 (25%), Positives = 23/67 (34%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VT    GIG A++  LA  G  V V    +E  +   A ++ E               
Sbjct: 17 ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS---------VTG 67

Query: 69 IRCDVTN 75
            C V  
Sbjct: 68 TVCHVGK 74

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 54.0 bits (131), Expect = 1e-10
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 15/67 (22%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTGGA GIGRA++ A A +G  V + DL  E      A+                  F
Sbjct: 9  VLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI---------------GGAF 53

Query: 69 IRCDVTN 75
           + D+ +
Sbjct: 54 FQVDLED 60

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 54.2 bits (131), Expect = 1e-10
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTG + GIGR ++L L   G  V +     +    VA   +    +          + 
Sbjct: 8  CVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQ---------CVP 58

Query: 69 IRCDVTN 75
          + CD + 
Sbjct: 59 VVCDSSQ 65

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 54.1 bits (131), Expect = 1e-10
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 11/76 (14%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA-LVEKENAKFHS 59
          +      +  VTGG  GIG A + A+A  G  V V+  S     EV   + ++   K   
Sbjct: 10 ISFV-NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK--- 65

Query: 60 NLGFPSAMFIRCDVTN 75
                    +CDV+N
Sbjct: 66 ------TKAYQCDVSN 75

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 54.2 bits (131), Expect = 2e-10
 Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 21/79 (26%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL------------SEEKGNEVAALVEKENAK 56
            VTGGA G GR+ ++ LA +G  + + D+            +     E    VEK   K
Sbjct: 13 VLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRK 72

Query: 57 FHSNLGFPSAMFIRCDVTN 75
                   A     DV +
Sbjct: 73 ---------AYTAEVDVRD 82

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 53.7 bits (130), Expect = 2e-10
 Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 8/67 (11%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG   GIG  ++ A A  G  + +      + +     + ++               
Sbjct: 23 ALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT--------DVHT 74

Query: 69 IRCDVTN 75
          +  D+  
Sbjct: 75 VAIDLAE 81

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 22/80 (27%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-------------SEEKGNEVAALVEKENA 55
          AF+TG A G GRA ++ +A +G  +  VD+             S +  +E   LVE  N 
Sbjct: 14 AFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR 73

Query: 56 KFHSNLGFPSAMFIRCDVTN 75
          +          +    D  +
Sbjct: 74 R---------IVAAVVDTRD 84

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 53.4 bits (129), Expect = 2e-10
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 21/70 (30%)

Query: 8  SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          SA VTGGASG+GRA +LAL  +G  V V+DL  E  +                      +
Sbjct: 4  SALVTGGASGLGRAAALALKARGYRVVVLDLRREGED---------------------LI 42

Query: 68 FIRCDVTNTK 77
          ++  DVT  +
Sbjct: 43 YVEGDVTREE 52

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 53.3 bits (129), Expect = 2e-10
 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 22/80 (27%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-------------SEEKGNEVAALVEKENA 55
          AF+TG A G GR+ ++ LA +G  +   D+             S E  +E A LVE +  
Sbjct: 18 AFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR 77

Query: 56 KFHSNLGFPSAMFIRCDVTN 75
          K         A+    DV +
Sbjct: 78 K---------ALTRVLDVRD 88

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 53.4 bits (129), Expect = 3e-10
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 11/67 (16%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG  SGIG  ++  LA  G  + +    +       A + +   K         A+ 
Sbjct: 7  ALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVK---------AVH 55

Query: 69 IRCDVTN 75
             D+++
Sbjct: 56 HPADLSD 62

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 53.3 bits (129), Expect = 3e-10
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 10/74 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
            V G    IGRA ++  A +G  V +    + E      A +EK             A+
Sbjct: 11 IVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS---------AL 61

Query: 68 FIRCDVTNTKFALA 81
           I+ D+TN     A
Sbjct: 62 AIKADLTNAAEVEA 75

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 53.3 bits (129), Expect = 3e-10
 Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 20/67 (29%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTG + GIGRA++     +G  V  + + +    +                       
Sbjct: 11 VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAK--------------------YDH 50

Query: 69 IRCDVTN 75
          I CDVTN
Sbjct: 51 IECDVTN 57

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 53.0 bits (128), Expect = 4e-10
 Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 25/83 (30%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL----------------SEEKGNEVAALVEK 52
          AFVTG A G GR+ ++ LA +G  +  VD+                + E   E A LV+ 
Sbjct: 14 AFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG 73

Query: 53 ENAKFHSNLGFPSAMFIRCDVTN 75
           N +          +    DV +
Sbjct: 74 HNRR---------IVTAEVDVRD 87

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 52.9 bits (128), Expect = 4e-10
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG  SGIG A +     +G  V +    ++  +   A            +G   A+ 
Sbjct: 32 AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE-----------IG-GGAVG 79

Query: 69 IRCDVTN 75
          I+ D  N
Sbjct: 80 IQADSAN 86

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 52.9 bits (128), Expect = 4e-10
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 12/75 (16%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M    G +  VTG ASGIGRA     A +G  +  VD  E    E  A +E E       
Sbjct: 1  MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE------- 53

Query: 61 LGFPSAMFIRCDVTN 75
               A+ +  DV++
Sbjct: 54 -----AIAVVADVSD 63

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 52.5 bits (127), Expect = 5e-10
 Identities = 13/67 (19%), Positives = 20/67 (29%), Gaps = 13/67 (19%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTG   GIGR    AL   G  V  V  ++   + +                      
Sbjct: 10 VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-------------IEP 56

Query: 69 IRCDVTN 75
          +  D+ +
Sbjct: 57 VCVDLGD 63

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 52.6 bits (127), Expect = 5e-10
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 10/76 (13%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHS 59
          M  K    A VTGG  GIG  ++ ALA  G  + +  +   E    V A +    A+   
Sbjct: 24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR--- 80

Query: 60 NLGFPSAMFIRCDVTN 75
                 +F+R D+ +
Sbjct: 81 ------VIFLRADLAD 90

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 52.2 bits (126), Expect = 6e-10
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 6/67 (8%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG + GIG  ++  LA  G  V ++  S++   +V   + + N            + 
Sbjct: 10 AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQ------EPIV 63

Query: 69 IRCDVTN 75
          +  D+T+
Sbjct: 64 LPLDITD 70

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 52.6 bits (127), Expect = 6e-10
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 8/67 (11%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          AF+TGG +G+G+ ++  L+  G    +     +     A  +  +               
Sbjct: 29 AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN--------KVHA 80

Query: 69 IRCDVTN 75
          I+CDV +
Sbjct: 81 IQCDVRD 87

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 52.2 bits (126), Expect = 6e-10
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 8/75 (10%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M    G S  VTGG  GIGR ++   A  G  V V   S    +   A +++        
Sbjct: 5  MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL------- 57

Query: 61 LGFPSAMFIRCDVTN 75
           G    + ++ DV++
Sbjct: 58 -GSGKVIGVQTDVSD 71

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 52.2 bits (126), Expect = 6e-10
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG  SGIG  ++ ALA +G  + +       +  +V A +  ++            +
Sbjct: 7  AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG--------VKVL 58

Query: 68 FIRCDVTN 75
          +   D++ 
Sbjct: 59 YDGADLSK 66

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 52.2 bits (126), Expect = 7e-10
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 9/75 (12%)

Query: 1   MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
            +L    S  VTGG  GIGR ++   A  G  V V   S  + + V A + +        
Sbjct: 37  FDLS-ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL------- 88

Query: 61  LGFPSAMFIRCDVTN 75
            G  + + +R DV++
Sbjct: 89  -GAGNVIGVRLDVSD 102

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 51.7 bits (125), Expect = 9e-10
 Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 13/70 (18%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          GL A VTG   GIGR    AL   G  V  V  +      +A                P 
Sbjct: 7  GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE-------------CPG 53

Query: 66 AMFIRCDVTN 75
             +  D+ +
Sbjct: 54 IEPVCVDLGD 63

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 51.4 bits (124), Expect = 1e-09
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE-VAALVEKENAKFHSNLGFPSAM 67
          A VTGG+ G+G  ++  LA  G  V V   + E+ +E    L EK   +  +        
Sbjct: 24 ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMA-------- 75

Query: 68 FIRCDVTN 75
            RCDV+N
Sbjct: 76 -FRCDVSN 82

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 51.4 bits (124), Expect = 1e-09
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 10/75 (13%)

Query: 1   MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
              +    A VTG   GIGR ++  LA     V  +  +++  + V   ++    +    
Sbjct: 40  YCGE-NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE---- 94

Query: 61  LGFPSAMFIRCDVTN 75
                +     DV+ 
Sbjct: 95  -----SSGYAGDVSK 104

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 51.4 bits (124), Expect = 1e-09
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 9/75 (12%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M +  G  A +TG +SGIG A++   A +G  + +V    ++ +E A  ++++       
Sbjct: 3  MGIS-GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG----- 56

Query: 61 LGFPSAMFIRCDVTN 75
                + +  DV  
Sbjct: 57 ---VRVLEVAVDVAT 68

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 10/67 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG  SGIGRA++   A  G  V       +   EVA  +                  
Sbjct: 34 AVVTGAGSGIGRAIAHGYARAGAHVLAWG-RTDGVKEVADEIADGGGSAE---------A 83

Query: 69 IRCDVTN 75
          +  D+ +
Sbjct: 84 VVADLAD 90

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 11/67 (16%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG  SGIG  +  A A  G  + ++D      +  A   E   A             
Sbjct: 14 AAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQ--ELGAAVAAR--------- 62

Query: 69 IRCDVTN 75
          I  DVT+
Sbjct: 63 IVADVTD 69

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 11/76 (14%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHS 59
          +       A +T G  G+G+ ++  L  KG  VTV   S       +    +    +   
Sbjct: 3  LGRF-VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEER--- 58

Query: 60 NLGFPSAMFIRCDVTN 75
                  F++ DVT 
Sbjct: 59 ------LQFVQADVTK 68

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 15/75 (20%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M LK   +  +TG A GIGRA     A +G  +   D+ E    E A  V          
Sbjct: 1  MRLK-DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--------- 50

Query: 61 LGFPSAMFIRCDVTN 75
               A  +  DV +
Sbjct: 51 -----AHPVVMDVAD 60

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 12/78 (15%)

Query: 1  MELKPGLS---AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKF 57
          M+L  G+    A VT G+SG+G A +L LA  G  + +   + EK    A+ +    +  
Sbjct: 1  MDL--GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSG- 57

Query: 58 HSNLGFPSAMFIRCDVTN 75
                     +  D+  
Sbjct: 58 ------AQVDIVAGDIRE 69

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 51.1 bits (123), Expect = 2e-09
 Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 12/77 (15%)

Query: 3  LKPGL----SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFH 58
            P L     AF+TGG SGIG  ++      G    +   S  +    A  +     +  
Sbjct: 20 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGR-- 77

Query: 59 SNLGFPSAMFIRCDVTN 75
                  + +  DV  
Sbjct: 78 ------RCLPLSMDVRA 88

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 50.6 bits (122), Expect = 3e-09
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 6/67 (8%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTG A GIG A + A A  G  V ++  +E    EV+  ++            P  + 
Sbjct: 17 ILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQP------QPLIIA 70

Query: 69 IRCDVTN 75
          +  +   
Sbjct: 71 LNLENAT 77

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 50.7 bits (122), Expect = 3e-09
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 21/79 (26%)

Query: 9   AFVTGGASGIGRALSLALAGKGVFVTVVDL------------SEEKGNEVAALVEKENAK 56
           AF+TG A G GR  ++ LA  G  +  +DL            S E+  E   LVE++  +
Sbjct: 49  AFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR 108

Query: 57  FHSNLGFPSAMFIRCDVTN 75
                     +  + DV +
Sbjct: 109 ---------IIARQADVRD 118

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 50.6 bits (122), Expect = 3e-09
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 9/75 (12%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
           +      A VTG + GIGRA++L LA +G  V     +E     + A  ++   +    
Sbjct: 23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE---- 78

Query: 61 LGFPSAMFIRCDVTN 75
                     +V +
Sbjct: 79 -----GRGAVLNVND 88

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 50.4 bits (121), Expect = 3e-09
 Identities = 16/76 (21%), Positives = 25/76 (32%), Gaps = 10/76 (13%)

Query: 1  MELKP-GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHS 59
          M L P   +  V G    IG  ++   A +G  V     + EK   + A +E    +   
Sbjct: 1  MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGR--- 57

Query: 60 NLGFPSAMFIRCDVTN 75
                 +    D  N
Sbjct: 58 ------IVARSLDARN 67

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 50.2 bits (121), Expect = 3e-09
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG + G+G+A ++ LA  G  + +    S++   E A  +EK   K          +
Sbjct: 7  ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK---------VL 57

Query: 68 FIRCDVTN 75
           ++ +V  
Sbjct: 58 VVKANVGQ 65

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 50.3 bits (121), Expect = 3e-09
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 17/82 (20%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG-------NEVAALVEKE 53
          + L  G + F+TG + GIG A++L  A  G  V +   S           +  AA V   
Sbjct: 2  LTLS-GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA 60

Query: 54 NAKFHSNLGFPSAMFIRCDVTN 75
            +          + ++CD+  
Sbjct: 61 GGQ---------GLALKCDIRE 73

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 50.3 bits (121), Expect = 4e-09
 Identities = 17/45 (37%), Positives = 19/45 (42%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV 50
          G  A VTG A GIG A+  AL   G  V V D +         L 
Sbjct: 28 GKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLP 72

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 49.8 bits (120), Expect = 4e-09
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 10/75 (13%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M L     A VTG + GIG  ++ ALA KG  V     S+    +    ++++  K    
Sbjct: 1  MSLN-EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFK---- 55

Query: 61 LGFPSAMFIRCDVTN 75
               A  +  ++++
Sbjct: 56 -----ARGLVLNISD 65

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 49.9 bits (119), Expect = 5e-09
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 8/67 (11%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGG  GIG  +   L+  G+ V +      KG+E    ++             + +F
Sbjct: 15 AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS--------NHENVVF 66

Query: 69 IRCDVTN 75
           + DVT+
Sbjct: 67 HQLDVTD 73

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 49.8 bits (120), Expect = 5e-09
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 11/76 (14%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHS 59
          M+LK G +A VTG + G+G+A++  L   G  + +    +    +  A   +        
Sbjct: 1  MQLK-GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGIN--- 56

Query: 60 NLGFPSAMFIRCDVTN 75
                 +  + DV N
Sbjct: 57 ------VVVAKGDVKN 66

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 49.5 bits (119), Expect = 6e-09
 Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 15/67 (22%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VT      G   +L L+  G  V   D S ++ +E+ A                +  +
Sbjct: 4  AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF---------------AETY 48

Query: 69 IRCDVTN 75
           +    +
Sbjct: 49 PQLKPMS 55

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 49.4 bits (119), Expect = 6e-09
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG A GIG+A++  LA  G  V V D++ E     AA           ++G   A  
Sbjct: 9  ALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAA-----------SIG-KKARA 56

Query: 69 IRCDVTN 75
          I  D+++
Sbjct: 57 IAADISD 63

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 49.2 bits (118), Expect = 9e-09
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 9/74 (12%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG A  IGRA+++ L   G  V +    S E    +A  + KE +         +A+
Sbjct: 26 AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN--------TAV 77

Query: 68 FIRCDVTNTKFALA 81
            + D+TN+    A
Sbjct: 78 VCQADLTNSNVLPA 91

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 48.8 bits (117), Expect = 1e-08
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 17/82 (20%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG-------NEVAALVEKE 53
          M L+ G + F++GG+ GIG A++  +A  G  V +V  S E            A  +E+ 
Sbjct: 5  MSLR-GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA 63

Query: 54 NAKFHSNLGFPSAMFIRCDVTN 75
            +         A+ I  D+ +
Sbjct: 64 GGQ---------ALPIVGDIRD 76

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 48.7 bits (116), Expect = 1e-08
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 16/74 (21%)

Query: 9   AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG-------NEVAALVEKENAKFHSNL 61
            F+TG + GIG+A++L  A  G  + +   + +            A  +E    K     
Sbjct: 48  VFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK----- 102

Query: 62  GFPSAMFIRCDVTN 75
               A+    DV +
Sbjct: 103 ----ALPCIVDVRD 112

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 21/79 (26%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL------------SEEKGNEVAALVEKENAK 56
          A +TGGA G+GR+ ++ALA  G  + + D             + +   E  ALVEK   +
Sbjct: 13 ALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRR 72

Query: 57 FHSNLGFPSAMFIRCDVTN 75
                    +  + DV +
Sbjct: 73 ---------CISAKVDVKD 82

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 11/76 (14%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHS 59
          + L     A VTG + GIGRA++L LA  G  V V    S    +EV A +     +   
Sbjct: 24 LPLT-DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGE--- 79

Query: 60 NLGFPSAMFIRCDVTN 75
                A  ++ DV+ 
Sbjct: 80 ------AFAVKADVSQ 89

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A V GG  G+G A    L   G  V +   +E     +               G P    
Sbjct: 11 AIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIRE-----------EFG-PRVHA 58

Query: 69 IRCDVTN 75
          +R D+ +
Sbjct: 59 LRSDIAD 65

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 20/68 (29%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTV-VDLSEEKGNEVAALVEKENAKFHSNLGFPSAM 67
            VTGG+ GIG+A+   L        + +D+ +    E                      
Sbjct: 7  YLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAEN-------------------LK 47

Query: 68 FIRCDVTN 75
          FI+ D+T 
Sbjct: 48 FIKADLTK 55

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 8/75 (10%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M+LK G +A VTG  +GIG+A++ +L  +G  V +    EE  NE    +  +       
Sbjct: 6  MQLK-GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY------ 58

Query: 61 LGFPSAMFIRCDVTN 75
                  +  D+  
Sbjct: 59 -PDAILQPVVADLGT 72

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
            VTG + GIG+A++L+L   G  V V    S +   EV+  +E    +         A+
Sbjct: 4  VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ---------AI 54

Query: 68 FIRCDVTN 75
              DV+ 
Sbjct: 55 TFGGDVSK 62

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 11/75 (14%), Positives = 20/75 (26%), Gaps = 19/75 (25%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M  +      +TG + GIG  L  A   +   V     S +   +               
Sbjct: 24 MRNQ-QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIH----------- 71

Query: 61 LGFPSAMFIRCDVTN 75
                  +  D++ 
Sbjct: 72 -------TVAGDISK 79

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 47.6 bits (114), Expect = 3e-08
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 10/67 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGG+ GIG+ ++  L   G  V +     E   + A  +           G      
Sbjct: 32 ALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA--------YG--DCQA 81

Query: 69 IRCDVTN 75
          I  D+++
Sbjct: 82 IPADLSS 88

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 12/70 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTV---VDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
            + GG   +G   +   A + V + +        +  N++   +E + AK         
Sbjct: 14 IVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAK--------- 64

Query: 66 AMFIRCDVTN 75
              + D++N
Sbjct: 65 VALYQSDLSN 74

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 47.1 bits (113), Expect = 4e-08
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG + GIGRA+++ LA +G  V V    +E+K NEV   ++K  +          A+
Sbjct: 7  ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSD---------AI 57

Query: 68 FIRCDVTN 75
           +R DV N
Sbjct: 58 AVRADVAN 65

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 47.1 bits (113), Expect = 4e-08
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALV 50
          M+   G + +VTG   GIG A +LA    G  VT  D +  ++    A  V
Sbjct: 3  MDFS-GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEV 52

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 47.1 bits (113), Expect = 5e-08
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 11/76 (14%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-GNEVAALVEKENAKFHS 59
          ++L+ G  + VTG   GIGRA++  LA  G  V +   S E+       +  K   K   
Sbjct: 3  IKLQ-GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVK--- 58

Query: 60 NLGFPSAMFIRCDVTN 75
                A  +  ++ +
Sbjct: 59 ------AHGVEMNLLS 68

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 47.2 bits (113), Expect = 5e-08
 Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 16/74 (21%)

Query: 9  AFVTGGASGIGRALSLALAGKG-------VFVTVVDLSEEKGNEVAALVEKENAKFHSNL 61
            +TG   GIGRA++L  A            + +   +     +++     E A      
Sbjct: 5  LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL----- 59

Query: 62 GFPSAMFIRCDVTN 75
                 I  D+++
Sbjct: 60 ----TDTITADISD 69

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 47.1 bits (113), Expect = 5e-08
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG + GIGR+++L LA +G  V V    S+EK   V   ++ +            + 
Sbjct: 7  ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVD---------SF 57

Query: 68 FIRCDVTN 75
           I+ +V +
Sbjct: 58 AIQANVAD 65

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 46.9 bits (112), Expect = 5e-08
 Identities = 7/42 (16%), Positives = 14/42 (33%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV 50
            V GG+  +G  +      K      +D  E    + +  +
Sbjct: 25 ILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTI 66

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 46.8 bits (112), Expect = 6e-08
 Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 12/78 (15%)

Query: 1  MELKPGLSAFVTG--GASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKF 57
          + LK G    VTG  G  G+G   +   A  G  V +   S  +   E    +EK     
Sbjct: 16 LSLK-GKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKT---- 70

Query: 58 HSNLGFPSAMFIRCDVTN 75
              G   A   +C V +
Sbjct: 71 ---YGI-KAKAYKCQVDS 84

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 46.5 bits (111), Expect = 7e-08
 Identities = 12/45 (26%), Positives = 16/45 (35%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV 50
               V GG   +G A+       G  V  +DLS     +   LV
Sbjct: 3  SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILV 47

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 46.5 bits (111), Expect = 8e-08
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)

Query: 11 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIR 70
          VTG + GIGR ++  LA  G  V V   S+E   +V +   +        LG  SA +I 
Sbjct: 33 VTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--------LGAASAHYIA 84

Query: 71 CDVTN 75
            + +
Sbjct: 85 GTMED 89

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTG  SG+GRAL++ L  +G  V+++    ++  +               LG  + + 
Sbjct: 6  IIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQEL-----------LLG-NAVIG 53

Query: 69 IRCDVTN 75
          I  D+ +
Sbjct: 54 IVADLAH 60

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 46.1 bits (110), Expect = 1e-07
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE 51
            +TG ASGIG AL   LA  G  V  +D  +    ++ A + 
Sbjct: 4  IAITGSASGIGAALKELLARAGHTVIGIDRGQA---DIEADLS 43

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 13/75 (17%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M L+ G  A VTG + GIG+A++  LA +G  V     SE     ++             
Sbjct: 5  MNLE-GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISD-----------Y 52

Query: 61 LGFPSAMFIRCDVTN 75
          LG  +   +  +VTN
Sbjct: 53 LG-DNGKGMALNVTN 66

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 13/75 (17%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
           +L  G  A VTG   GIG A++     +G  V +    E+K  E+AA           +
Sbjct: 23 FKLT-GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAA-----------D 70

Query: 61 LGFPSAMFIRCDVTN 75
          LG         ++++
Sbjct: 71 LG-KDVFVFSANLSD 84

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 12/49 (24%), Positives = 12/49 (24%), Gaps = 1/49 (2%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG-NEVAALVEKENAK 56
          A VT      G A   AL   G  V   D S            E     
Sbjct: 4  ALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI 52

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 11/76 (14%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTV-VDLSEEKGNEVAALVEKENAKFHS 59
          M +     A+VTGG  GIG ++   L   G  V      +  +  +     +     F++
Sbjct: 9  MVMS-QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYA 67

Query: 60 NLGFPSAMFIRCDVTN 75
                      +V +
Sbjct: 68 ---------SEGNVGD 74

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 45.5 bits (109), Expect = 2e-07
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 9/68 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A +TG + GIGRA++L LA  G  + +    + EK  EVA    +         G P   
Sbjct: 4  ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARR--------RGSPLVA 55

Query: 68 FIRCDVTN 75
           +  ++  
Sbjct: 56 VLGANLLE 63

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 45.0 bits (107), Expect = 2e-07
 Identities = 9/46 (19%), Positives = 18/46 (39%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE 51
               V GG   +G     A   +  +V  +D+ E +    + +V+
Sbjct: 7  ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK 52

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          AFVTGG  G+G A+S  L   G+ V V      +  +            F +        
Sbjct: 28 AFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKA-------- 79

Query: 68 FIRCDVTN 75
              DV +
Sbjct: 80 -YAVDVAD 86

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 45.0 bits (107), Expect = 3e-07
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 3/47 (6%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENA 55
            ++G A+GIG A    L   G  +  +D+ +    EV A +     
Sbjct: 4  IVISGCATGIGAATRKVLEAAGHQIVGIDIRDA---EVIADLSTAEG 47

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 44.9 bits (107), Expect = 3e-07
 Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 15/75 (20%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M L       +TG +  +G   +L L   G  V +   +E         + +        
Sbjct: 23 MTLS-SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH---ASVTELRQA------- 71

Query: 61 LGFPSAMFIRCDVTN 75
               A+ +  D + 
Sbjct: 72 ----GAVALYGDFSC 82

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 44.9 bits (107), Expect = 3e-07
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 9/68 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A +TGGA  IG ++++ L  +G  V V    SE     + A +    A         SA+
Sbjct: 14 AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG--------SAV 65

Query: 68 FIRCDVTN 75
            + D++ 
Sbjct: 66 LCKGDLSL 73

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 44.4 bits (106), Expect = 4e-07
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 13/75 (17%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          ++L  G ++ +TG +SGIG A++  L   G  V +   +EEK   +              
Sbjct: 10 IDLT-GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGN-----------A 57

Query: 61 LGFPSAMFIRCDVTN 75
          L   +     C++ N
Sbjct: 58 LK-DNYTIEVCNLAN 71

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 44.4 bits (106), Expect = 4e-07
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 17/68 (25%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGG+ GIGRA++ AL  +G  V +   + E+  +                    A+ 
Sbjct: 5  ALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG-----------------AVP 47

Query: 69 IRCDVTNT 76
          +  D+   
Sbjct: 48 LPTDLEKD 55

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 44.5 bits (106), Expect = 4e-07
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          AFVTGG+ GIG A++  LA +G  V +  + + E+   V + +E+   +         A+
Sbjct: 34 AFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGR---------AV 84

Query: 68 FIRCDVTN 75
           IR D  +
Sbjct: 85 AIRADNRD 92

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 44.4 bits (105), Expect = 4e-07
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 9/69 (13%)

Query: 9   AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
           A VTG A  +GR+++  L  +G  V +    S  + N ++A +              SA+
Sbjct: 49  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN--------SAI 100

Query: 68  FIRCDVTNT 76
            ++ D++N 
Sbjct: 101 TVQADLSNV 109

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 44.2 bits (105), Expect = 6e-07
 Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 10/67 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTG + GIG+++   L        V  ++  +   +  L EK   +           +
Sbjct: 5  ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEA-PLKKLKEKYGDR---------FFY 54

Query: 69 IRCDVTN 75
          +  D+T 
Sbjct: 55 VVGDITE 61

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG + GIG A++  LA  G  V +          EVA  +E    K         A+
Sbjct: 30 AIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGK---------AL 80

Query: 68 FIRCDVTN 75
            + DV++
Sbjct: 81 TAQADVSD 88

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 43.9 bits (104), Expect = 7e-07
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 9/69 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG A  +GR+++  L  +G  V +    S  + N ++A +              SA+
Sbjct: 12 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN--------SAI 63

Query: 68 FIRCDVTNT 76
           ++ D++N 
Sbjct: 64 TVQADLSNV 72

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 43.7 bits (104), Expect = 8e-07
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 13/67 (19%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TG + GIG A +  L  KG  V ++   E++   +AA +E              A+ 
Sbjct: 8  VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG-------------ALP 54

Query: 69 IRCDVTN 75
          +  DV  
Sbjct: 55 LPGDVRE 61

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
            VTGG+ GIG A+    A +G  V V    + E  + V A + +   +         A+
Sbjct: 29 VLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGE---------AV 79

Query: 68 FIRCDVTN 75
           I  DV N
Sbjct: 80 AIPGDVGN 87

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 16/50 (32%), Positives = 20/50 (40%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV 50
                 S  VTGG  GIG A++ A A  G  V +   S E      A+ 
Sbjct: 16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAVK 65

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 43.0 bits (102), Expect = 1e-06
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG   GIGR +++ L  +G  V V    S E   EV A ++K  +          A 
Sbjct: 32 ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD---------AA 82

Query: 68 FIRCDVTN 75
           ++ +V  
Sbjct: 83 CVKANVGV 90

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 14/45 (31%), Positives = 18/45 (40%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV 50
            S  VTGG  GIG A++  LA  G  V V          +  + 
Sbjct: 15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVE 59

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 8/67 (11%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG + GIG A++ ALA  G  + +   S ++  ++A  + +E              +
Sbjct: 5  AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--------VEVFY 56

Query: 69 IRCDVTN 75
             DV+ 
Sbjct: 57 HHLDVSK 63

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 42.6 bits (101), Expect = 2e-06
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A  TG   GIGR +++ L  +G  V V    S +   EV A ++K  A+          +
Sbjct: 24 ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ---------GV 74

Query: 68 FIRCDVTN 75
           I+ D++ 
Sbjct: 75 AIQADISK 82

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 42.2 bits (100), Expect = 3e-06
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG   GIG A+++ L   G  V V    S +   +V + ++   +          A+
Sbjct: 21 ALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSD---------AI 71

Query: 68 FIRCDVTN 75
           I+ D+  
Sbjct: 72 AIKADIRQ 79

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 42.0 bits (99), Expect = 3e-06
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 14/72 (19%)

Query: 9  AFVTGGASGIGRALSLALAGKG--VFVTV---VDLSEEKGNEVAALVEKENAKFHSNLGF 63
            +TG +SG GR  + ALAG G  V+ ++   V  +      +A      +    +    
Sbjct: 8  ILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT---- 63

Query: 64 PSAMFIRCDVTN 75
               +  DV +
Sbjct: 64 -----LELDVQS 70

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 41.8 bits (99), Expect = 3e-06
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 1  MELK-PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
          MEL        V   + GIGRA++  L+ +G  VT+   +EE       
Sbjct: 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH 61

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 41.4 bits (98), Expect = 4e-06
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
            +  +TG  SG+G   +  LA +G  V +      KG   A 
Sbjct: 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR 58

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 41.5 bits (98), Expect = 5e-06
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 9   AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAK 56
           A VTG A GIG  ++   A  G  V  +D+      ++  + +K    
Sbjct: 216 AVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AEDLKRVADKVGGT 262

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 41.4 bits (97), Expect = 5e-06
 Identities = 14/48 (29%), Positives = 19/48 (39%)

Query: 6   GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE 53
           G  A V  G   +G   +  LAG+G  V +     +K    A  V K 
Sbjct: 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR 166

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 10/69 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG + GIGRA++  LA  G  V +     +E+  E    ++              A 
Sbjct: 10 ALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS---------AF 60

Query: 68 FIRCDVTNT 76
           I  ++ + 
Sbjct: 61 SIGANLESL 69

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 40.6 bits (96), Expect = 8e-06
 Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 9/75 (12%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TG + GIG  ++  L   G  + +    + +   +A  +                  
Sbjct: 7  ILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTAL---------A 57

Query: 69 IRCDVTNTKFALAFL 83
             DVT+     AF 
Sbjct: 58 QVLDVTDRHSVAAFA 72

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 40.4 bits (95), Expect = 1e-05
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 10/70 (14%)

Query: 9  AFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTGG  GIG A+   L       V +      +G      ++ E           S  
Sbjct: 7  ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG---------LSPR 57

Query: 68 FIRCDVTNTK 77
          F + D+ + +
Sbjct: 58 FHQLDIDDLQ 67

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 10/70 (14%)

Query: 9  AFVTGGASGIGRALSLALA---GKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
            +TG + G GRAL+  LA     G  + V   SE    ++   +  +            
Sbjct: 9  CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK------- 61

Query: 66 AMFIRCDVTN 75
           +    D+  
Sbjct: 62 VVLAAADLGT 71

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG +SGIG A + ALA +G  V +     EK   +   +    AK H          
Sbjct: 10 ALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHV--------- 60

Query: 69 IRCDVTN 75
          +  DV +
Sbjct: 61 LELDVAD 67

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 38.0 bits (89), Expect = 9e-05
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 11/69 (15%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE--NAKFHSNLGFPSA 66
          A VTG + GIG A++ AL  +G+ V     +     E+AA  +                 
Sbjct: 35 ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP------- 87

Query: 67 MFIRCDVTN 75
             RCD++N
Sbjct: 88 --YRCDLSN 94

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 7  LSAFVTGGASGIGRALSLALAGKGVFVT 34
          +   +TG   G+G A + AL G  + ++
Sbjct: 1  MRVLITGATGGLGGAFARALKGHDLLLS 28

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 36.7 bits (85), Expect = 3e-04
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 5/50 (10%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLS-----EEKGNEVAALVEKE 53
          A VTG  +G+GR  +L  A +G  V V DL      +      A +V  E
Sbjct: 22 AVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDE 71

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 36.6 bits (85), Expect = 3e-04
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL 38
            +TG   G+G+  SL  A  G  V V DL
Sbjct: 11 VIITGAGGGLGKYYSLEFAKLGAKVVVNDL 40

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 36.2 bits (84), Expect = 3e-04
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL 38
            VTG   GIGRA +LA A +G  V V D+
Sbjct: 30 VIVTGAGGGIGRAHALAFAAEGARVVVNDI 59

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLS-----EEKGNEVAALVEKE 53
            VTG   G+GRA +LA A +G  V V DL        KG+  A  V +E
Sbjct: 12 VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEE 61

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 16/75 (21%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M LK    A VTG   G+G  +   L+     V  +  + E    +AAL E E  +    
Sbjct: 1  MSLK-KKIAVVTGATGGMGIEIVKDLSRDH-IVYALGRNPEH---LAALAEIEGVE---- 51

Query: 61 LGFPSAMFIRCDVTN 75
                  I  D+  
Sbjct: 52 -------PIESDIVK 59

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	85
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.8
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.78
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.74
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.74
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.73
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.72
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.72
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.72
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.72
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.71
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.7
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.7
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.7
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.7
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.69
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.69
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.69
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.69
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.69
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.69
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.69
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.69
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.68
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.68
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.68
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.68
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.68
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.68
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.68
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.68
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.68
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.68
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.68
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.68
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.67
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.67
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.67
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.67
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.67
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.67
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.67
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.67
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.67
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.67
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.66
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.66
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.66
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.66
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.66
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.66
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.66
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.66
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.66
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.66
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.65
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.65
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.65
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.65
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.65
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.65
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.65
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.65
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.65
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.65
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.65
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.65
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.65
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.65
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.64
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.64
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.64
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.64
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.64
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.64
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.64
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.64
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.64
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.64
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.64
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.64
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.64
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.64
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.64
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.63
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.63
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.63
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.63
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.63
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.63
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.63
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.63
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.63
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.63
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.63
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.63
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.63
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.63
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.63
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.63
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.62
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.62
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.62
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.62
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.62
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.62
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.62
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.62
1spx_A	278	Short-chain reductase family member (5L265); paral	99.62
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.62
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.61
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.61
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.61
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.61
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.61
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.61
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.61
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.61
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.61
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.61
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.61
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.61
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.61
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.61
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.6
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.6
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.6
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.6
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.6
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.6
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.59
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.59
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.59
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.59
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.59
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.59
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.59
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.59
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.59
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.59
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.58
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.58
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.58
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.58
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.58
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.58
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.58
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.58
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.58
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.58
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.57
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.57
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.57
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.57
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.57
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.56
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.56
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.56
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.56
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.56
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.56
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.55
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.55
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.55
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.55
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.55
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.55
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.55
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.54
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.53
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.53
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.53
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.53
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.52
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.52
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.52
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.52
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.51
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.5
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.49
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.49
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.48
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.47
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.46
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.46
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.45
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.45
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.45
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.43
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.43
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.42
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.42
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.41
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.4
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.39
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.38
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.38
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.37
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.37
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.37
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.37
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.36
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.36
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.36
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.36
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.36
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.35
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.35
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.35
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.34
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.33
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.33
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.32
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.32
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.32
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.32
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.31
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.3
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.3
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.3
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.3
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.29
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.29
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.29
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.28
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.27
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.27
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.27
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.26
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.26
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.26
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.25
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.24
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.24
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.24
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.24
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.24
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.22
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.2
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.2
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.2
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.2
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.19
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.19
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.19
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.18
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.17
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.17
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.17
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.16
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.16
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.16
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.16
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.15
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.15
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.15
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.14
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.13
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.13
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.12
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.12
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.12
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.11
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.11
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.1
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.1
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.08
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.08
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.08
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.08
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.08
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.08
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.06
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.06
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.04
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.04
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.03
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.02
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.01
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.01
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.01
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.01
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	98.99
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	98.98
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	98.97
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	98.97
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.97
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.95
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.95
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	98.95
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	98.94
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	98.92
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	98.92
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	98.91
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	98.9
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.9
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	98.9
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	98.87
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	98.87
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	98.79
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	98.78
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.78
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.78
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	98.77
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.77
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	98.75
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	98.71
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	98.7
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.68
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.66
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.62
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	98.62
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	98.58
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.57
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	98.57
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	98.56
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.55
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.53
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	98.52
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.5
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.44
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	98.42
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.41
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.4
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.39
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.39
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.36
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.35
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.34
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.33
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.26
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.24
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.21
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.14
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.13
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.13
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.13
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.12
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.12
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.11
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.11
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.11
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.11
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.09
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.09
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.07
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	98.06
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.05
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.05
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	98.03
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.95
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.94
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.93
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.92
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.91
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.91
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.88
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.86
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.86
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.85
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	97.84
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.83
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.83
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.8
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.78
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.77
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.71
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.7
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.68
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.68
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.64
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.62
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.6
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.59
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.59
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.57
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.56
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.54
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	97.53
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.52
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.51
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.5
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.46
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.44
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.38
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.38
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.38
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.37
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	97.37
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.37
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.35
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.29
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.28
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.27
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.26
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.25
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.24
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.21
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.19
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.18
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	97.17
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.17
1lnq_A	336	MTHK channels, potassium channel related protein;	97.14
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.13
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.1
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.1
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.1
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.09
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.08
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.05
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.04
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.03
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.02
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	97.01
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	97.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.98
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.98
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.97
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.95
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.95
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.95
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.92
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.92
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.9
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.89
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.88
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.88
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.87
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.86
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.83
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.82
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	96.82
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.81
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.8
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.79
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.78
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.78
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.76
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.75
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.75
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	96.75
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.75
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.75
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	96.75
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.75
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.74
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.73
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.73
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.73
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.72
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.71
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.7
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.67
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.65
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.63
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.62
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.62
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.6
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	96.6
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.6
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.6
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	96.59
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	96.59
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.58
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.57
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	96.57
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.57
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.56
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.56
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	96.55
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.55
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	96.54
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.54
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.52
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.5
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.5
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.48
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.46
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.46
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.42
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	96.42
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.41
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.41
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.4
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.39
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.38
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.36
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	96.34
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.33
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.32
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.32
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.31
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	96.24
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.24
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.23
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.16
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.15
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.15
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.13
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.13
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.12

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.80  E-value=2.1e-19  Score=108.09  Aligned_cols=74  Identities=28%  Similarity=0.361  Sum_probs=68.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|+ ||+++|||+++|||+++++.|+++|++|++++|+++.++.+.+++...+..         +.++.+|++|+++ +
T Consensus         3 ~sL~-gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~---------~~~~~~Dvt~~~~v~   72 (254)
T 4fn4_A            3 QSLK-NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE---------VLGVKADVSKKKDVE   72 (254)
T ss_dssp             GGGT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTSHHHHH
T ss_pred             CCCC-CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHH
Confidence            5788 999999999999999999999999999999999999999999999876655         8999999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        73 ~~~~~   77 (254)
T 4fn4_A           73 EFVRR   77 (254)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98865

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.78  E-value=5.9e-19  Score=106.15  Aligned_cols=73  Identities=30%  Similarity=0.363  Sum_probs=67.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||+++++.|+++|++|++++|+++.+++..+++...+..         +.++.+|++|+++ ++
T Consensus         6 ~L~-gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~---------~~~~~~Dv~~~~~v~~   75 (255)
T 4g81_D            6 DLT-GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD---------AHGVAFDVTDELAIEA   75 (255)
T ss_dssp             CCT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC---------EEECCCCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEeeCCCHHHHHH
Confidence            578 999999999999999999999999999999999999999999888877655         8999999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        76 ~~~~   79 (255)
T 4g81_D           76 AFSK   79 (255)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8875

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.74  E-value=1.3e-17  Score=100.05  Aligned_cols=75  Identities=21%  Similarity=0.262  Sum_probs=65.0

Q ss_pred             CCCCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            1 MELKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      |+|+ ||+++|||+++  |||+++++.|+++|++|++++|+++..+.+.+++.+.+.        +++.++++|++++++
T Consensus         2 ~~l~-gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~--------~~~~~~~~Dv~~~~~   72 (256)
T 4fs3_A            2 LNLE-NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ--------PEAHLYQIDVQSDEE   72 (256)
T ss_dssp             CCCT-TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC--------SSCEEEECCTTCHHH
T ss_pred             cCCC-CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--------CcEEEEEccCCCHHH
Confidence            6788 99999999765  999999999999999999999999888888877765433        228899999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       ++++++
T Consensus        73 v~~~~~~   79 (256)
T 4fs3_A           73 VINGFEQ   79 (256)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             988764

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.74  E-value=2.1e-17  Score=98.80  Aligned_cols=73  Identities=18%  Similarity=0.144  Sum_probs=65.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||+++|||++++++|+++|++|++++|+.+.++.+.+++...+..         +.++.+|++|+++ ++
T Consensus         4 ~~~-~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~~   73 (252)
T 3h7a_A            4 TPR-NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGR---------IVARSLDARNEDEVTA   73 (252)
T ss_dssp             -CC-SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCE---------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEECcCCCHHHHHH
Confidence            466 899999999999999999999999999999999999999998888766554         8999999999999 98


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        74 ~~~~   77 (252)
T 3h7a_A           74 FLNA   77 (252)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.73  E-value=3.2e-17  Score=98.74  Aligned_cols=73  Identities=25%  Similarity=0.369  Sum_probs=62.2

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|+ ||+++|||+++|||+++++.|+++|++|++++|+++..+. .+++.+.+..         +.++.+|++|+++ +
T Consensus         3 ~~L~-gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~-~~~~~~~~~~---------~~~~~~Dv~~~~~v~   71 (258)
T 4gkb_A            3 LNLQ-DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAF-LDALAQRQPR---------ATYLPVELQDDAQCR   71 (258)
T ss_dssp             CCCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH-HHHHHHHCTT---------CEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH-HHHHHhcCCC---------EEEEEeecCCHHHHH
Confidence            4577 9999999999999999999999999999999999876543 3455555555         8999999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        72 ~~v~~   76 (258)
T 4gkb_A           72 DAVAQ   76 (258)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88765

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.72  E-value=2.9e-17  Score=99.60  Aligned_cols=69  Identities=23%  Similarity=0.261  Sum_probs=61.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |+ ||+++|||+++|||+++++.|++.|++|++++|+++.++...+++   +..         +.++++|++|+++ +++
T Consensus        27 L~-gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~---------~~~~~~Dv~~~~~v~~~   93 (273)
T 4fgs_A           27 LN-AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGG---------AVGIQADSANLAELDRL   93 (273)
T ss_dssp             TT-TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTT---------CEEEECCTTCHHHHHHH
T ss_pred             hC-CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCC---------eEEEEecCCCHHHHHHH
Confidence            67 999999999999999999999999999999999998887776665   233         7899999999999 998


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        94 ~~~   96 (273)
T 4fgs_A           94 YEK   96 (273)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            865

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.72  E-value=4.1e-17  Score=97.14  Aligned_cols=74  Identities=30%  Similarity=0.418  Sum_probs=66.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++|+.+..+.+.+++...+..         +.++.+|++|+++ +
T Consensus         5 ~~~~-~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   74 (253)
T 3qiv_A            5 MRFE-NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT---------AISVAVDVSDPESAK   74 (253)
T ss_dssp             CTTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE---------EEEEECCTTSHHHHH
T ss_pred             cccC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHH
Confidence            5677 999999999999999999999999999999999998888888888765554         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        75 ~~~~~   79 (253)
T 3qiv_A           75 AMADR   79 (253)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.72  E-value=4.8e-17  Score=96.58  Aligned_cols=74  Identities=26%  Similarity=0.304  Sum_probs=66.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++|+++..+....++...+..         +.++.+|++|+++ +
T Consensus         1 m~l~-~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   70 (247)
T 3lyl_A            1 MSLN-EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFK---------ARGLVLNISDIESIQ   70 (247)
T ss_dssp             CTTT-TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEecCCCHHHHH
Confidence            7888 999999999999999999999999999999999998888888877765544         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        71 ~~~~~   75 (247)
T 3lyl_A           71 NFFAE   75 (247)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.72  E-value=5.3e-17  Score=98.22  Aligned_cols=73  Identities=33%  Similarity=0.449  Sum_probs=65.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+.++.+.+++...+..         +.++.+|++|+++ ++
T Consensus        29 ~l~-gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~d~~~v~~   98 (276)
T 3r1i_A           29 DLS-GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK---------ALPIRCDVTQPDQVRG   98 (276)
T ss_dssp             CCT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCC---------CEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEEcCCCCHHHHHH
Confidence            467 899999999999999999999999999999999999999888888765544         8899999999999 98


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        99 ~~~~  102 (276)
T 3r1i_A           99 MLDQ  102 (276)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.71  E-value=5.7e-17  Score=97.05  Aligned_cols=74  Identities=35%  Similarity=0.518  Sum_probs=65.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++...+..         +.++.+|++|+++ +
T Consensus         8 ~~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~d~~~v~   77 (256)
T 3gaf_A            8 FHLN-DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK---------AIGLECNVTDEQHRE   77 (256)
T ss_dssp             TCCT-TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEECCCCCHHHHH
Confidence            3567 899999999999999999999999999999999998888888888765544         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        78 ~~~~~   82 (256)
T 3gaf_A           78 AVIKA   82 (256)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.70  E-value=1.7e-16  Score=95.28  Aligned_cols=76  Identities=24%  Similarity=0.222  Sum_probs=65.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++....+.       .++.++.+|++|+++ +
T Consensus         4 ~~l~-~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-------~~~~~~~~Dv~~~~~v~   75 (265)
T 3lf2_A            4 YDLS-EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPG-------ARLFASVCDVLDALQVR   75 (265)
T ss_dssp             CCCT-TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT-------CCEEEEECCTTCHHHHH
T ss_pred             cCcC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-------ceEEEEeCCCCCHHHHH
Confidence            4567 999999999999999999999999999999999998888888888764332       128899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        76 ~~~~~   80 (265)
T 3lf2_A           76 AFAEA   80 (265)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.70  E-value=1.8e-16  Score=96.21  Aligned_cols=74  Identities=31%  Similarity=0.449  Sum_probs=63.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-------chHHHHHHHHHHhhhccCCCCCCceEEEEecC
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-------KGNEVAALVEKENAKFHSNLGFPSAMFIRCDV   73 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv   73 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+       .++...+++...+..         +.++.+|+
T Consensus         5 m~l~-~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dv   74 (285)
T 3sc4_A            5 MSLR-GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ---------ALPIVGDI   74 (285)
T ss_dssp             -CCT-TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSE---------EEEEECCT
T ss_pred             cCCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCc---------EEEEECCC
Confidence            5677 999999999999999999999999999999999876       466667777665555         89999999


Q ss_pred             CCHHH-HHHhhh
Q 034737           74 TNTKF-ALAFLR   84 (85)
Q Consensus        74 ~~~~~-~~~~~~   84 (85)
                      +|+++ ++++++
T Consensus        75 ~~~~~v~~~~~~   86 (285)
T 3sc4_A           75 RDGDAVAAAVAK   86 (285)
T ss_dssp             TSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            99999 988764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.70  E-value=9.3e-17  Score=96.39  Aligned_cols=75  Identities=27%  Similarity=0.361  Sum_probs=64.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++...+.        .++.++.+|++|+++ +
T Consensus         6 ~~l~-~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--------~~~~~~~~Dv~~~~~v~   76 (262)
T 3pk0_A            6 FDLQ-GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS--------GKVIGVQTDVSDRAQCD   76 (262)
T ss_dssp             TCCT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS--------SCEEEEECCTTSHHHHH
T ss_pred             cCCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC--------CcEEEEEcCCCCHHHHH
Confidence            3567 99999999999999999999999999999999999888888887765431        128999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        77 ~~~~~   81 (262)
T 3pk0_A           77 ALAGR   81 (262)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.70  E-value=5.1e-17  Score=98.06  Aligned_cols=73  Identities=27%  Similarity=0.350  Sum_probs=65.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++...+..         +.++.+|++|+++ ++
T Consensus        23 ~l~-gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dv~d~~~v~~   92 (271)
T 4ibo_A           23 DLG-GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHD---------AEAVAFDVTSESEIIE   92 (271)
T ss_dssp             CCT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC---------EEECCCCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHHHH
Confidence            467 999999999999999999999999999999999998888888888765544         8999999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        93 ~~~~   96 (271)
T 4ibo_A           93 AFAR   96 (271)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.69  E-value=9.6e-17  Score=97.39  Aligned_cols=74  Identities=32%  Similarity=0.392  Sum_probs=63.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++...+..         +.++.+|++|+++ +
T Consensus        24 ~~~~-~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dv~d~~~v~   93 (283)
T 3v8b_A           24 MNQP-SPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQ---------AIALEADVSDELQMR   93 (283)
T ss_dssp             ---C-CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCC---------EEEEECCTTCHHHHH
T ss_pred             cCCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHH
Confidence            4566 899999999999999999999999999999999998888888777654433         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        94 ~~~~~   98 (283)
T 3v8b_A           94 NAVRD   98 (283)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.69  E-value=1.7e-16  Score=95.23  Aligned_cols=72  Identities=19%  Similarity=0.243  Sum_probs=64.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+.+.++.+.+++...+..         +.++.+|++|+++ +++
T Consensus         9 l~-~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~~~   78 (264)
T 3ucx_A            9 LT-DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR---------ALSVGTDITDDAQVAHL   78 (264)
T ss_dssp             TT-TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHHHH
T ss_pred             cC-CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHHHH
Confidence            55 899999999999999999999999999999999998888888888765544         8999999999999 988


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        79 ~~~   81 (264)
T 3ucx_A           79 VDE   81 (264)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.69  E-value=1.1e-16  Score=96.18  Aligned_cols=73  Identities=19%  Similarity=0.274  Sum_probs=64.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH-hhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE-NAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++... +..         +.++.+|++|+++ +
T Consensus        17 ~l~-~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~---------~~~~~~Dv~~~~~v~   86 (266)
T 4egf_A           17 RLD-GKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTD---------VHTVAIDLAEPDAPA   86 (266)
T ss_dssp             CCT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCC---------EEEEECCTTSTTHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCc---------EEEEEecCCCHHHHH
Confidence            466 899999999999999999999999999999999998888888887653 333         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        87 ~~~~~   91 (266)
T 4egf_A           87 ELARR   91 (266)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.69  E-value=2.8e-16  Score=94.79  Aligned_cols=74  Identities=27%  Similarity=0.434  Sum_probs=63.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-------hHHHHHHHHHHhhhccCCCCCCceEEEEecC
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-------GNEVAALVEKENAKFHSNLGFPSAMFIRCDV   73 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv   73 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+.       ++....++...+..         +.++.+|+
T Consensus         2 ~~l~-~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dv   71 (274)
T 3e03_A            2 LTLS-GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ---------GLALKCDI   71 (274)
T ss_dssp             CCCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSE---------EEEEECCT
T ss_pred             CCCC-CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCe---------EEEEeCCC
Confidence            6788 9999999999999999999999999999999998753       55666666555544         89999999


Q ss_pred             CCHHH-HHHhhh
Q 034737           74 TNTKF-ALAFLR   84 (85)
Q Consensus        74 ~~~~~-~~~~~~   84 (85)
                      +|+++ ++++++
T Consensus        72 ~~~~~v~~~~~~   83 (274)
T 3e03_A           72 REEDQVRAAVAA   83 (274)
T ss_dssp             TCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            99999 888764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.69  E-value=1.3e-16  Score=96.39  Aligned_cols=77  Identities=26%  Similarity=0.306  Sum_probs=64.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++...+.      ...++.++.+|++|+++ +
T Consensus         7 ~~l~-~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~~~Dv~~~~~v~   79 (281)
T 3svt_A            7 LSFQ-DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA------NGGAIRYEPTDITNEDETA   79 (281)
T ss_dssp             -CCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCC------SSCEEEEEECCTTSHHHHH
T ss_pred             cCcC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC------CCceEEEEeCCCCCHHHHH
Confidence            3566 99999999999999999999999999999999999888888887765432      11238999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        80 ~~~~~   84 (281)
T 3svt_A           80 RAVDA   84 (281)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.69  E-value=2.2e-16  Score=94.51  Aligned_cols=74  Identities=24%  Similarity=0.305  Sum_probs=63.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++...+..         +.++.+|++|+++ +
T Consensus         5 ~~l~-~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   74 (260)
T 2ae2_A            5 WNLE-GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK---------VEASVCDLSSRSERQ   74 (260)
T ss_dssp             TCCT-TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE---------EEEEECCTTCHHHHH
T ss_pred             cCCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHH
Confidence            4567 899999999999999999999999999999999988877777777544333         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        75 ~~~~~   79 (260)
T 2ae2_A           75 ELMNT   79 (260)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88753

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.69  E-value=1.4e-16  Score=97.12  Aligned_cols=74  Identities=31%  Similarity=0.356  Sum_probs=64.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++...+.        .++.++.+|++|+++ ++
T Consensus        38 ~l~-~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--------~~~~~~~~Dv~d~~~v~~  108 (293)
T 3rih_A           38 DLS-ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA--------GNVIGVRLDVSDPGSCAD  108 (293)
T ss_dssp             CCT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS--------SCEEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC--------CcEEEEEEeCCCHHHHHH
Confidence            466 89999999999999999999999999999999999988888887764431        238999999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus       109 ~~~~  112 (293)
T 3rih_A          109 AART  112 (293)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.69  E-value=2e-16  Score=95.27  Aligned_cols=72  Identities=18%  Similarity=0.214  Sum_probs=64.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+.+.++.+.+++...+..         +.++.+|++|+++ +++
T Consensus         2 l~-~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dv~d~~~v~~~   71 (264)
T 3tfo_A            2 VM-DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGT---------ALAQVLDVTDRHSVAAF   71 (264)
T ss_dssp             CT-TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCE---------EEEEECCTTCHHHHHHH
T ss_pred             CC-CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHHHH
Confidence            45 899999999999999999999999999999999998888888888765544         8899999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        72 ~~~   74 (264)
T 3tfo_A           72 AQA   74 (264)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.68  E-value=3.1e-16  Score=93.90  Aligned_cols=74  Identities=23%  Similarity=0.358  Sum_probs=63.3

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH-hhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE-NAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+++..+.+.+++... +..         +.++.+|++|+++ 
T Consensus         3 ~~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~---------~~~~~~D~~~~~~~   72 (263)
T 3ai3_A            3 MGIS-GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR---------VLEVAVDVATPEGV   72 (263)
T ss_dssp             CCCT-TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCC---------EEEEECCTTSHHHH
T ss_pred             CCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHH
Confidence            3467 899999999999999999999999999999999988777777777554 333         8899999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        73 ~~~~~~   78 (263)
T 3ai3_A           73 DAVVES   78 (263)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888763

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.68  E-value=1.2e-16  Score=95.56  Aligned_cols=73  Identities=25%  Similarity=0.365  Sum_probs=63.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++...+..         +.++.+|++|+++ ++
T Consensus         3 ~l~-~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~~   72 (257)
T 3imf_A            3 AMK-EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ---------ILTVQMDVRNTDDIQK   72 (257)
T ss_dssp             TTT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTC---------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHHH
Confidence            466 899999999999999999999999999999999998888887777543333         8999999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        73 ~~~~   76 (257)
T 3imf_A           73 MIEQ   76 (257)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.68  E-value=3.1e-16  Score=95.79  Aligned_cols=72  Identities=26%  Similarity=0.320  Sum_probs=64.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|+.+.++.+.+++...+..         +.++.+|++|+++ +++
T Consensus        29 l~-gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dv~d~~~v~~~   98 (301)
T 3tjr_A           29 FD-GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD---------AHGVVCDVRHLDEMVRL   98 (301)
T ss_dssp             ST-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHHHH
T ss_pred             cC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------eEEEEccCCCHHHHHHH
Confidence            56 899999999999999999999999999999999999888888888765444         8999999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        99 ~~~  101 (301)
T 3tjr_A           99 ADE  101 (301)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.68  E-value=1.6e-16  Score=96.03  Aligned_cols=73  Identities=26%  Similarity=0.348  Sum_probs=65.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++...+..         +.++.+|++|+++ ++
T Consensus        30 ~l~-gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~~~~   99 (275)
T 4imr_A           30 GLR-GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGT---------AQELAGDLSEAGAGTD   99 (275)
T ss_dssp             CCT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCC---------EEEEECCTTSTTHHHH
T ss_pred             CCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCe---------EEEEEecCCCHHHHHH
Confidence            466 899999999999999999999999999999999999888888888765544         8999999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus       100 ~~~~  103 (275)
T 4imr_A          100 LIER  103 (275)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.68  E-value=4.1e-16  Score=95.99  Aligned_cols=74  Identities=30%  Similarity=0.416  Sum_probs=64.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|+.+.++.+.+++...+...       ++.++.+|++++++ +++
T Consensus         6 l~-~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~-------~~~~~~~Dl~~~~~v~~~   77 (319)
T 3ioy_A            6 FA-GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGP-------EVMGVQLDVASREGFKMA   77 (319)
T ss_dssp             CT-TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGG-------GEEEEECCTTCHHHHHHH
T ss_pred             CC-CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCC-------eEEEEECCCCCHHHHHHH
Confidence            56 8999999999999999999999999999999999998888888887655421       28999999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      ++.
T Consensus        78 ~~~   80 (319)
T 3ioy_A           78 ADE   80 (319)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.68  E-value=5e-16  Score=93.38  Aligned_cols=76  Identities=26%  Similarity=0.339  Sum_probs=65.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++...++..       .+.++.+|++++++ +
T Consensus         6 ~~l~-~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-------~~~~~~~D~~~~~~~~   77 (267)
T 3t4x_A            6 MQLK-GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDA-------ILQPVVADLGTEQGCQ   77 (267)
T ss_dssp             CCCT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTC-------EEEEEECCTTSHHHHH
T ss_pred             cccC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCc-------eEEEEecCCCCHHHHH
Confidence            4567 9999999999999999999999999999999999988888888887664332       27889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        78 ~~~~~   82 (267)
T 3t4x_A           78 DVIEK   82 (267)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            88764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.68  E-value=2.4e-16  Score=95.56  Aligned_cols=73  Identities=26%  Similarity=0.407  Sum_probs=62.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++...+...        +.++.+|++|+++ +++
T Consensus        31 l~-gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--------~~~~~~Dv~d~~~v~~~  101 (281)
T 4dry_A           31 GE-GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNI--------VRAVVCDVGDPDQVAAL  101 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSC--------EEEEECCTTCHHHHHHH
T ss_pred             CC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCe--------EEEEEcCCCCHHHHHHH
Confidence            46 8999999999999999999999999999999999988888888887655441        5899999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus       102 ~~~  104 (281)
T 4dry_A          102 FAA  104 (281)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.68  E-value=2.6e-16  Score=93.94  Aligned_cols=76  Identities=21%  Similarity=0.295  Sum_probs=64.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++......      ..++.++.+|++|+++ ++
T Consensus         4 ~~~-~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~   76 (250)
T 3nyw_A            4 EKQ-KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKH------VQEPIVLPLDITDCTKADT   76 (250)
T ss_dssp             -CC-CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTT------SCCCEEEECCTTCHHHHHH
T ss_pred             cCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccc------cCcceEEeccCCCHHHHHH
Confidence            456 899999999999999999999999999999999999888888888765321      1238899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        77 ~~~~   80 (250)
T 3nyw_A           77 EIKD   80 (250)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.68  E-value=3.1e-16  Score=94.58  Aligned_cols=73  Identities=25%  Similarity=0.310  Sum_probs=64.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+.++....++...+..         +.++.+|++|+++ ++
T Consensus        25 ~l~-~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~d~~~v~~   94 (270)
T 3ftp_A           25 TLD-KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE---------GRGAVLNVNDATAVDA   94 (270)
T ss_dssp             TTT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCC---------CEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEEeCCCHHHHHH
Confidence            356 899999999999999999999999999999999998888888888766544         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        95 ~~~~   98 (270)
T 3ftp_A           95 LVES   98 (270)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.68  E-value=3.7e-16  Score=94.17  Aligned_cols=74  Identities=28%  Similarity=0.352  Sum_probs=63.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+++.++...+++...+..         +.++.+|++|+++ +
T Consensus        17 ~~l~-~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   86 (273)
T 1ae1_A           17 WSLK-GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN---------VEGSVCDLLSRTERD   86 (273)
T ss_dssp             CCCT-TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEECCCCCHHHHH
Confidence            3466 899999999999999999999999999999999988777777777554433         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        87 ~~~~~   91 (273)
T 1ae1_A           87 KLMQT   91 (273)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88753

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.68  E-value=3.1e-16  Score=94.51  Aligned_cols=74  Identities=32%  Similarity=0.443  Sum_probs=62.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|+++++ +.+..+...+++...+..         +.++.+|++|+++ 
T Consensus        24 ~~l~-~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~d~~~v   93 (269)
T 4dmm_A           24 LPLT-DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGE---------AFAVKADVSQESEV   93 (269)
T ss_dssp             CTTT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---------EEEEECCTTSHHHH
T ss_pred             cCCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCc---------EEEEECCCCCHHHH
Confidence            4567 999999999999999999999999999999988 555667777776654444         8999999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        94 ~~~~~~   99 (269)
T 4dmm_A           94 EALFAA   99 (269)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888764

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.68  E-value=3.2e-16  Score=93.93  Aligned_cols=72  Identities=28%  Similarity=0.314  Sum_probs=64.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++...+..         +.++.+|++++++ .++
T Consensus        27 l~-~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~v~~~   96 (262)
T 3rkr_A           27 LS-GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGE---------AESHACDLSHSDAIAAF   96 (262)
T ss_dssp             TT-TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE---------EEEEECCTTCHHHHHHH
T ss_pred             cC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCc---------eeEEEecCCCHHHHHHH
Confidence            55 899999999999999999999999999999999998888888888765544         8999999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        97 ~~~   99 (262)
T 3rkr_A           97 ATG   99 (262)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.67  E-value=4.6e-16  Score=93.64  Aligned_cols=74  Identities=26%  Similarity=0.350  Sum_probs=61.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++|+. +..+...+.+...+..         +.++.+|++|+++ 
T Consensus        25 m~l~-~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~v   94 (271)
T 4iin_A           25 MQFT-GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYK---------AAVIKFDAASESDF   94 (271)
T ss_dssp             CCCS-CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHH
T ss_pred             cccC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---------eEEEECCCCCHHHH
Confidence            5677 99999999999999999999999999999999954 4455566666554444         8999999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        95 ~~~~~~  100 (271)
T 4iin_A           95 IEAIQT  100 (271)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.67  E-value=6.3e-16  Score=93.22  Aligned_cols=73  Identities=33%  Similarity=0.437  Sum_probs=61.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC------------ccchHHHHHHHHHHhhhccCCCCCCceEEE
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS------------EEKGNEVAALVEKENAKFHSNLGFPSAMFI   69 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   69 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+            .+.++...+.+...+..         +.++
T Consensus        10 ~l~-gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~   79 (278)
T 3sx2_A           10 PLT-GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSR---------IVAR   79 (278)
T ss_dssp             TTT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCC---------EEEE
T ss_pred             CCC-CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCe---------EEEE
Confidence            466 8999999999999999999999999999999987            44555666666554444         8999


Q ss_pred             EecCCCHHH-HHHhhh
Q 034737           70 RCDVTNTKF-ALAFLR   84 (85)
Q Consensus        70 ~~Dv~~~~~-~~~~~~   84 (85)
                      .+|++|+++ ++++++
T Consensus        80 ~~D~~~~~~v~~~~~~   95 (278)
T 3sx2_A           80 QADVRDRESLSAALQA   95 (278)
T ss_dssp             ECCTTCHHHHHHHHHH
T ss_pred             eCCCCCHHHHHHHHHH
Confidence            999999999 888764

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.67  E-value=5.4e-16  Score=93.70  Aligned_cols=73  Identities=25%  Similarity=0.230  Sum_probs=63.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++...+..         +.++.+|++|+++ ++
T Consensus        19 ~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dv~~~~~v~~   88 (277)
T 2rhc_B           19 TQD-SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE---------ADGRTCDVRSVPEIEA   88 (277)
T ss_dssp             CTT-SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHHH
T ss_pred             cCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEECCCCCHHHHHH
Confidence            467 899999999999999999999999999999999988777777777554433         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        89 ~~~~   92 (277)
T 2rhc_B           89 LVAA   92 (277)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.67  E-value=4.4e-16  Score=93.31  Aligned_cols=73  Identities=26%  Similarity=0.334  Sum_probs=61.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|. +|+++|||+++|||++++++|+++|++|+++ .++.+..+...+++...+..         +.++.+|++|+++ +
T Consensus         5 ~l~-~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~   74 (259)
T 3edm_A            5 RFT-NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS---------ALAIKADLTNAAEVE   74 (259)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSC---------CEEEECCTTCHHHHH
T ss_pred             CCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHHH
Confidence            466 9999999999999999999999999999998 55666677777777654444         8999999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        75 ~~~~~   79 (259)
T 3edm_A           75 AAISA   79 (259)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.67  E-value=4.9e-16  Score=92.59  Aligned_cols=74  Identities=34%  Similarity=0.349  Sum_probs=63.2

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++...+..         +.++.+|++|+++ +
T Consensus         9 ~~l~-~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~   78 (260)
T 3awd_A            9 LRLD-NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD---------VSSVVMDVTNTESVQ   78 (260)
T ss_dssp             GCCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHH
T ss_pred             cCCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEecCCCHHHHH
Confidence            3466 899999999999999999999999999999999988777777776554433         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        79 ~~~~~   83 (260)
T 3awd_A           79 NAVRS   83 (260)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.67  E-value=5.9e-16  Score=92.17  Aligned_cols=73  Identities=30%  Similarity=0.371  Sum_probs=63.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+.++.+.+++...+..         +.++.+|++|+++ ++
T Consensus         4 ~l~-~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dv~~~~~~~~   73 (247)
T 2jah_A            4 ALQ-GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAK---------VHVLELDVADRQGVDA   73 (247)
T ss_dssp             TTT-TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHHH
T ss_pred             cCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEECCCCCHHHHHH
Confidence            356 899999999999999999999999999999999988888777777654333         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        74 ~~~~   77 (247)
T 2jah_A           74 AVAS   77 (247)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.67  E-value=6.8e-16  Score=92.66  Aligned_cols=75  Identities=25%  Similarity=0.355  Sum_probs=63.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++......       .++.++.+|++|+++ ++
T Consensus        10 ~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~   81 (267)
T 1iy8_A           10 RFT-DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD-------AEVLTTVADVSDEAQVEA   81 (267)
T ss_dssp             CCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTT-------CCEEEEECCTTSHHHHHH
T ss_pred             cCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-------ceEEEEEccCCCHHHHHH
Confidence            466 899999999999999999999999999999999988877777777654211       128899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        82 ~~~~   85 (267)
T 1iy8_A           82 YVTA   85 (267)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.67  E-value=4.8e-16  Score=92.68  Aligned_cols=71  Identities=28%  Similarity=0.373  Sum_probs=61.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++..   .         ..++.+|++|+++ +
T Consensus         5 ~~l~-gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~---------~~~~~~Dv~d~~~v~   71 (248)
T 3op4_A            5 MNLE-GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---N---------GKGMALNVTNPESIE   71 (248)
T ss_dssp             TCCT-TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---G---------EEEEECCTTCHHHHH
T ss_pred             cCCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---c---------ceEEEEeCCCHHHHH
Confidence            4567 89999999999999999999999999999999998877776665532   2         7789999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        72 ~~~~~   76 (248)
T 3op4_A           72 AVLKA   76 (248)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.67  E-value=5.1e-16  Score=94.74  Aligned_cols=77  Identities=23%  Similarity=0.296  Sum_probs=63.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+++.++...+++...+..      ..++.++.+|++|+++ +
T Consensus        22 ~~l~-~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~------~~~~~~~~~Dv~d~~~v~   94 (297)
T 1xhl_A           22 ARFS-GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP------AEKINAVVADVTEASGQD   94 (297)
T ss_dssp             -CCT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC------GGGEEEEECCTTSHHHHH
T ss_pred             cCCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC------CceEEEEecCCCCHHHHH
Confidence            3567 899999999999999999999999999999999988888777777554320      0028899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        95 ~~~~~   99 (297)
T 1xhl_A           95 DIINT   99 (297)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.67  E-value=5.8e-16  Score=92.69  Aligned_cols=73  Identities=23%  Similarity=0.342  Sum_probs=63.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++.++...+++...+..         +.++.+|++|+++ ++
T Consensus         2 ~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~~   71 (260)
T 2qq5_A            2 PMN-GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQ---------CVPVVCDSSQESEVRS   71 (260)
T ss_dssp             TTT-TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSE---------EEEEECCTTSHHHHHH
T ss_pred             CCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCc---------eEEEECCCCCHHHHHH
Confidence            466 899999999999999999999999999999999988888777777655444         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus        72 ~~~~   75 (260)
T 2qq5_A           72 LFEQ   75 (260)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.66  E-value=3.9e-16  Score=94.43  Aligned_cols=70  Identities=29%  Similarity=0.286  Sum_probs=62.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++...+..         +.++.+|++|+++ ++++++
T Consensus        24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dv~d~~~v~~~~~~   94 (279)
T 3sju_A           24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD---------VDGSSCDVTSTDEVHAAVAA   94 (279)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC---------EEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEECCCCCHHHHHHHHHH
Confidence            899999999999999999999999999999999998888888888655444         8999999999999 888764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.66  E-value=6.9e-16  Score=93.19  Aligned_cols=73  Identities=27%  Similarity=0.369  Sum_probs=60.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC------------ccchHHHHHHHHHHhhhccCCCCCCceEEE
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS------------EEKGNEVAALVEKENAKFHSNLGFPSAMFI   69 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   69 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+            .+.++....++...+..         +.++
T Consensus         7 ~l~-gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~   76 (287)
T 3pxx_A            7 RVQ-DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRK---------AYTA   76 (287)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSC---------EEEE
T ss_pred             ccC-CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCc---------eEEE
Confidence            466 8999999999999999999999999999999987            44455555555544333         8999


Q ss_pred             EecCCCHHH-HHHhhh
Q 034737           70 RCDVTNTKF-ALAFLR   84 (85)
Q Consensus        70 ~~Dv~~~~~-~~~~~~   84 (85)
                      .+|++|+++ ++++++
T Consensus        77 ~~D~~~~~~v~~~~~~   92 (287)
T 3pxx_A           77 EVDVRDRAAVSRELAN   92 (287)
T ss_dssp             ECCTTCHHHHHHHHHH
T ss_pred             EccCCCHHHHHHHHHH
Confidence            999999999 888764

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.66  E-value=1.9e-16  Score=96.04  Aligned_cols=72  Identities=29%  Similarity=0.335  Sum_probs=63.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|+.+.++.+.+++...+..         +.++.+|++|+++ +++
T Consensus         6 l~-gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~~~   75 (280)
T 3tox_A            6 LE-GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE---------AAALAGDVGDEALHEAL   75 (280)
T ss_dssp             TT-TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCC---------EEECCCCTTCHHHHHHH
T ss_pred             CC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEECCCCCHHHHHHH
Confidence            56 899999999999999999999999999999999998888887777544333         8999999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        76 ~~~   78 (280)
T 3tox_A           76 VEL   78 (280)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.66  E-value=7.1e-16  Score=93.17  Aligned_cols=73  Identities=30%  Similarity=0.479  Sum_probs=59.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC------------ccchHHHHHHHHHHhhhccCCCCCCceEEE
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS------------EEKGNEVAALVEKENAKFHSNLGFPSAMFI   69 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   69 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+            .+.++.....+...+..         +.++
T Consensus         7 ~l~-~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~   76 (281)
T 3s55_A            7 DFE-GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRR---------CISA   76 (281)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCC---------EEEE
T ss_pred             ccC-CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCe---------EEEE
Confidence            466 8999999999999999999999999999999997            33444454455444333         8999


Q ss_pred             EecCCCHHH-HHHhhh
Q 034737           70 RCDVTNTKF-ALAFLR   84 (85)
Q Consensus        70 ~~Dv~~~~~-~~~~~~   84 (85)
                      .+|++|+++ ++++++
T Consensus        77 ~~Dv~~~~~v~~~~~~   92 (281)
T 3s55_A           77 KVDVKDRAALESFVAE   92 (281)
T ss_dssp             ECCTTCHHHHHHHHHH
T ss_pred             eCCCCCHHHHHHHHHH
Confidence            999999999 888764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.66  E-value=2.7e-16  Score=94.18  Aligned_cols=70  Identities=26%  Similarity=0.410  Sum_probs=59.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||+++++.|++.|++|++++|+..  +...+++.+.+..         +.++.+|++|+++ ++
T Consensus         6 ~L~-GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~---------~~~~~~Dv~d~~~v~~   73 (247)
T 4hp8_A            6 SLE-GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGN---------ASALLIDFADPLAAKD   73 (247)
T ss_dssp             CCT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCC---------EEEEECCTTSTTTTTT
T ss_pred             CCC-CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCc---------EEEEEccCCCHHHHHH
Confidence            578 999999999999999999999999999999999864  4555666655555         8999999999988 76


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus        74 ~~~   76 (247)
T 4hp8_A           74 SFT   76 (247)
T ss_dssp             SST
T ss_pred             HHH
Confidence            653

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.66  E-value=9.9e-16  Score=91.67  Aligned_cols=76  Identities=24%  Similarity=0.289  Sum_probs=62.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++......       .++.++.+|++|+++ +
T Consensus         3 ~~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~   74 (260)
T 2z1n_A            3 LGIQ-GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSG-------AQVDIVAGDIREPGDID   74 (260)
T ss_dssp             CCCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT-------CCEEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC-------CeEEEEEccCCCHHHHH
Confidence            4467 899999999999999999999999999999999988777777776532111       128899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        75 ~~~~~   79 (260)
T 2z1n_A           75 RLFEK   79 (260)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.66  E-value=5.8e-16  Score=93.77  Aligned_cols=71  Identities=37%  Similarity=0.428  Sum_probs=60.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+.++.....+   +..         +.++.+|++++++ +
T Consensus         1 M~l~-gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dv~~~~~v~   67 (281)
T 3zv4_A            1 MKLT-GEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGN---------AVGVVGDVRSLQDQK   67 (281)
T ss_dssp             CTTT-TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTT---------EEEEECCTTCHHHHH
T ss_pred             CCcC-CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCc---------EEEEEcCCCCHHHHH
Confidence            7888 999999999999999999999999999999999987766654432   222         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        68 ~~~~~   72 (281)
T 3zv4_A           68 RAAER   72 (281)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.66  E-value=6.9e-16  Score=93.23  Aligned_cols=73  Identities=34%  Similarity=0.435  Sum_probs=60.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-------------CccchHHHHHHHHHHhhhccCCCCCCceEE
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-------------SEEKGNEVAALVEKENAKFHSNLGFPSAMF   68 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   68 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|             +.+.++...+++...+..         +.+
T Consensus        12 ~l~-gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~   81 (280)
T 3pgx_A           12 SLQ-GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRK---------ALT   81 (280)
T ss_dssp             TTT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCC---------EEE
T ss_pred             ccC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe---------EEE
Confidence            366 899999999999999999999999999999998             455566666666544433         899


Q ss_pred             EEecCCCHHH-HHHhhh
Q 034737           69 IRCDVTNTKF-ALAFLR   84 (85)
Q Consensus        69 ~~~Dv~~~~~-~~~~~~   84 (85)
                      +.+|++|+++ ++++++
T Consensus        82 ~~~Dv~~~~~v~~~~~~   98 (280)
T 3pgx_A           82 RVLDVRDDAALRELVAD   98 (280)
T ss_dssp             EECCTTCHHHHHHHHHH
T ss_pred             EEcCCCCHHHHHHHHHH
Confidence            9999999999 988764

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.66  E-value=5.8e-16  Score=93.49  Aligned_cols=70  Identities=34%  Similarity=0.516  Sum_probs=61.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||+++|||++++++|+++|++|++++|+.+.++.+.+++   +..         +.++.+|++|.++ ++
T Consensus        27 ~l~-~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dl~~~~~v~~   93 (281)
T 3ppi_A           27 QFE-GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNR---------AEFVSTNVTSEDSVLA   93 (281)
T ss_dssp             GGT-TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTT---------EEEEECCTTCHHHHHH
T ss_pred             ccC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCc---------eEEEEcCCCCHHHHHH
Confidence            466 899999999999999999999999999999999988777776665   222         8999999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        94 ~~~~   97 (281)
T 3ppi_A           94 AIEA   97 (281)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.65  E-value=5.1e-16  Score=92.77  Aligned_cols=71  Identities=38%  Similarity=0.422  Sum_probs=54.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++.   ..         +.++.+|++|+++ +
T Consensus         3 ~~l~-~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~---------~~~~~~Dv~~~~~v~   69 (257)
T 3tpc_A            3 MQLK-SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG---AA---------VRFRNADVTNEADAT   69 (257)
T ss_dssp             -CCT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------------CEEEECCTTCHHHHH
T ss_pred             cccC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC---Cc---------eEEEEccCCCHHHHH
Confidence            4567 9999999999999999999999999999999999887777665552   22         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        70 ~~~~~   74 (257)
T 3tpc_A           70 AALAF   74 (257)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.65  E-value=1.2e-15  Score=92.21  Aligned_cols=73  Identities=22%  Similarity=0.278  Sum_probs=63.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+.+..+....++......        ++.++.+|++|+++ +++
T Consensus        25 l~-~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--------~~~~~~~Dv~~~~~v~~~   95 (277)
T 4fc7_A           25 LR-DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGR--------RCLPLSMDVRAPPAVMAA   95 (277)
T ss_dssp             TT-TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSS--------CEEEEECCTTCHHHHHHH
T ss_pred             cC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--------cEEEEEcCCCCHHHHHHH
Confidence            56 899999999999999999999999999999999998888877777654322        28999999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        96 ~~~   98 (277)
T 4fc7_A           96 VDQ   98 (277)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.65  E-value=8.7e-16  Score=92.98  Aligned_cols=73  Identities=33%  Similarity=0.417  Sum_probs=59.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC----------------ccchHHHHHHHHHHhhhccCCCCCCc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS----------------EEKGNEVAALVEKENAKFHSNLGFPS   65 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~----------------~~~~~~~~~~l~~~~~~~~~~~~~~~   65 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+                .+.++...+++...+..         
T Consensus         8 ~l~-~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------   77 (286)
T 3uve_A            8 RVE-GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRR---------   77 (286)
T ss_dssp             TTT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCC---------
T ss_pred             ccC-CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCc---------
Confidence            356 8999999999999999999999999999999987                34455555555433333         


Q ss_pred             eEEEEecCCCHHH-HHHhhh
Q 034737           66 AMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus        66 ~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +.++.+|++|+++ ++++++
T Consensus        78 ~~~~~~Dv~~~~~v~~~~~~   97 (286)
T 3uve_A           78 IVTAEVDVRDYDALKAAVDS   97 (286)
T ss_dssp             EEEEECCTTCHHHHHHHHHH
T ss_pred             eEEEEcCCCCHHHHHHHHHH
Confidence            8999999999999 988764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.65  E-value=6.5e-16  Score=92.30  Aligned_cols=71  Identities=27%  Similarity=0.398  Sum_probs=61.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++|+.+.++.+.+++   ...         +.++.+|++|+++ +
T Consensus         5 m~l~-~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~   71 (261)
T 3n74_A            5 MSLE-GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDA---------ALAVAADISKEADVD   71 (261)
T ss_dssp             CTTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTT---------EEEEECCTTSHHHHH
T ss_pred             ccCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCc---------eEEEEecCCCHHHHH
Confidence            6778 999999999999999999999999999999999988777766654   222         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        72 ~~~~~   76 (261)
T 3n74_A           72 AAVEA   76 (261)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.65  E-value=9.9e-16  Score=91.81  Aligned_cols=73  Identities=27%  Similarity=0.380  Sum_probs=62.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+.++.+.+++...+..         +.++.+|++|+++ ++
T Consensus         4 ~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~   73 (262)
T 1zem_A            4 KFN-GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE---------ARSYVCDVTSEEAVIG   73 (262)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSC---------EEEEECCTTCHHHHHH
T ss_pred             ccC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEecCCCHHHHHH
Confidence            356 899999999999999999999999999999999988777777777544333         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        74 ~~~~   77 (262)
T 1zem_A           74 TVDS   77 (262)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7763

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.65  E-value=8.9e-16  Score=92.75  Aligned_cols=76  Identities=22%  Similarity=0.291  Sum_probs=62.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++.++...+++...+..      ..++.++.+|++|+++ ++
T Consensus         3 ~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~   75 (280)
T 1xkq_A            3 RFS-NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS------EKQVNSVVADVTTEDGQDQ   75 (280)
T ss_dssp             TTT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC------GGGEEEEECCTTSHHHHHH
T ss_pred             CCC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCC------CcceEEEEecCCCHHHHHH
Confidence            466 899999999999999999999999999999999988877777766543220      0128899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        76 ~~~~   79 (280)
T 1xkq_A           76 IINS   79 (280)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.65  E-value=1.2e-15  Score=90.27  Aligned_cols=74  Identities=23%  Similarity=0.330  Sum_probs=62.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|+++ .|+++..+...+++...+..         +.++.+|++|+++ 
T Consensus         1 M~l~-~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~   70 (247)
T 2hq1_A            1 MQLK-GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGIN---------VVVAKGDVKNPEDV   70 (247)
T ss_dssp             CTTT-TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCC---------EEEEESCTTSHHHH
T ss_pred             CCCC-CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCc---------EEEEECCCCCHHHH
Confidence            7788 9999999999999999999999999999998 56777777776666544433         8899999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        71 ~~~~~~   76 (247)
T 2hq1_A           71 ENMVKT   76 (247)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887763

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.65  E-value=6.6e-16  Score=93.45  Aligned_cols=71  Identities=37%  Similarity=0.517  Sum_probs=61.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++   +..         +.++.+|++|+++ +
T Consensus        23 ~~l~-~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dv~d~~~v~   89 (277)
T 4dqx_A           23 MDLN-QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSK---------AFGVRVDVSSAKDAE   89 (277)
T ss_dssp             CTTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTT---------EEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc---------eEEEEecCCCHHHHH
Confidence            5677 999999999999999999999999999999999987776665553   223         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        90 ~~~~~   94 (277)
T 4dqx_A           90 SMVEK   94 (277)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.65  E-value=1.2e-15  Score=93.06  Aligned_cols=72  Identities=26%  Similarity=0.369  Sum_probs=60.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC------------ccchHHHHHHHHHHhhhccCCCCCCceEEEE
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS------------EEKGNEVAALVEKENAKFHSNLGFPSAMFIR   70 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   70 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+            .+.++...+++...+..         +.++.
T Consensus        26 l~-gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~   95 (299)
T 3t7c_A           26 VE-GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRR---------IIASQ   95 (299)
T ss_dssp             TT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCC---------EEEEE
T ss_pred             cC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCc---------eEEEE
Confidence            56 8999999999999999999999999999999987            44556666666544444         89999


Q ss_pred             ecCCCHHH-HHHhhh
Q 034737           71 CDVTNTKF-ALAFLR   84 (85)
Q Consensus        71 ~Dv~~~~~-~~~~~~   84 (85)
                      +|++|+++ ++++++
T Consensus        96 ~Dv~~~~~v~~~~~~  110 (299)
T 3t7c_A           96 VDVRDFDAMQAAVDD  110 (299)
T ss_dssp             CCTTCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHH
Confidence            99999999 988764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.65  E-value=1.3e-15  Score=91.73  Aligned_cols=70  Identities=33%  Similarity=0.296  Sum_probs=61.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++.++...+++   +..         +.++.+|++|+++ ++
T Consensus         8 ~l~-~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dv~~~~~v~~   74 (271)
T 3tzq_B            8 ELE-NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRG---------AVHHVVDLTNEVSVRA   74 (271)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTT---------CEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCC---------eEEEECCCCCHHHHHH
Confidence            466 899999999999999999999999999999999998887776665   233         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        75 ~~~~   78 (271)
T 3tzq_B           75 LIDF   78 (271)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.65  E-value=1.3e-15  Score=91.89  Aligned_cols=73  Identities=30%  Similarity=0.399  Sum_probs=60.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-------------CccchHHHHHHHHHHhhhccCCCCCCceEE
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-------------SEEKGNEVAALVEKENAKFHSNLGFPSAMF   68 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   68 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|             +.+.++...+.+...+..         +.+
T Consensus         8 ~l~-~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~   77 (277)
T 3tsc_A            8 KLE-GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRR---------IVA   77 (277)
T ss_dssp             TTT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCC---------EEE
T ss_pred             ccC-CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe---------EEE
Confidence            466 899999999999999999999999999999998             444555555555544443         899


Q ss_pred             EEecCCCHHH-HHHhhh
Q 034737           69 IRCDVTNTKF-ALAFLR   84 (85)
Q Consensus        69 ~~~Dv~~~~~-~~~~~~   84 (85)
                      +.+|++|+++ ++++++
T Consensus        78 ~~~D~~~~~~v~~~~~~   94 (277)
T 3tsc_A           78 AVVDTRDFDRLRKVVDD   94 (277)
T ss_dssp             EECCTTCHHHHHHHHHH
T ss_pred             EECCCCCHHHHHHHHHH
Confidence            9999999999 888764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.65  E-value=9.5e-16  Score=91.03  Aligned_cols=73  Identities=27%  Similarity=0.500  Sum_probs=62.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++...+..         +.++.+|++|+++ +
T Consensus         7 ~~~~-~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   76 (255)
T 1fmc_A            7 LRLD-GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---------AFACRCDITSEQELS   76 (255)
T ss_dssp             GCCT-TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCc---------eEEEEcCCCCHHHHH
Confidence            3466 899999999999999999999999999999999988777777776554433         8899999999999 8


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus        77 ~~~~   80 (255)
T 1fmc_A           77 ALAD   80 (255)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8875

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.65  E-value=1.6e-15  Score=90.56  Aligned_cols=73  Identities=26%  Similarity=0.369  Sum_probs=63.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecC--CCHHH-H
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDV--TNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv--~~~~~-~   79 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++...+..        .+.++.+|+  +|+++ +
T Consensus        10 l~-~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--------~~~~~~~D~~~~~~~~~~   80 (252)
T 3f1l_A           10 LN-DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR--------QPQWFILDLLTCTSENCQ   80 (252)
T ss_dssp             TT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSC--------CCEEEECCTTTCCHHHHH
T ss_pred             cC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC--------CceEEEEecccCCHHHHH
Confidence            56 899999999999999999999999999999999998888888888765542        178999999  99998 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        81 ~~~~~   85 (252)
T 3f1l_A           81 QLAQR   85 (252)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87764

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.65  E-value=1.2e-15  Score=90.75  Aligned_cols=72  Identities=39%  Similarity=0.520  Sum_probs=61.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++| +++..+...+++...+..         +.++.+|++|+++ ++
T Consensus         2 l~-~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~   71 (246)
T 2uvd_A            2 LK-GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSD---------AIAVRADVANAEDVTN   71 (246)
T ss_dssp             CT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHHH
T ss_pred             CC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHHH
Confidence            56 899999999999999999999999999999999 777777777776554333         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        72 ~~~~   75 (246)
T 2uvd_A           72 MVKQ   75 (246)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.64  E-value=1.6e-15  Score=91.24  Aligned_cols=73  Identities=33%  Similarity=0.471  Sum_probs=61.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHH-HHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE-KENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+.++....++. ..+..         +.++.+|++|+++ +
T Consensus        18 ~l~-~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~---------~~~~~~Dl~~~~~v~   87 (267)
T 1vl8_A           18 DLR-GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE---------TMAFRCDVSNYEEVK   87 (267)
T ss_dssp             CCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCC---------EEEEECCTTCHHHHH
T ss_pred             CCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCe---------EEEEEcCCCCHHHHH
Confidence            456 8999999999999999999999999999999999887777776663 22323         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        88 ~~~~~   92 (267)
T 1vl8_A           88 KLLEA   92 (267)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.64  E-value=1.5e-15  Score=91.39  Aligned_cols=74  Identities=22%  Similarity=0.215  Sum_probs=63.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++...+..         +.++.+|++|+++ +
T Consensus        27 ~~l~-~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~v~   96 (272)
T 1yb1_A           27 KSVT-GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK---------VHTFVVDCSNREDIY   96 (272)
T ss_dssp             CCCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHH
T ss_pred             cccC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCe---------EEEEEeeCCCHHHHH
Confidence            3466 899999999999999999999999999999999988777777777654433         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        97 ~~~~~  101 (272)
T 1yb1_A           97 SSAKK  101 (272)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.64  E-value=1.5e-15  Score=90.87  Aligned_cols=72  Identities=25%  Similarity=0.278  Sum_probs=62.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+++.++...+++...+..         +.++.+|++|+++ +++
T Consensus        12 l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~~~   81 (260)
T 2zat_A           12 LE-NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS---------VTGTVCHVGKAEDRERL   81 (260)
T ss_dssp             TT-TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHHHH
T ss_pred             CC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEccCCCHHHHHHH
Confidence            56 899999999999999999999999999999999988777777777554433         8899999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        82 ~~~   84 (260)
T 2zat_A           82 VAM   84 (260)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            763

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.64  E-value=8.9e-16  Score=92.48  Aligned_cols=74  Identities=30%  Similarity=0.355  Sum_probs=59.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |.+. +|+++|||+++|||++++++|+++|++|++++ ++.+..+.+.+++...+..         +.++.+|++|+++ 
T Consensus        23 m~~~-~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~v   92 (267)
T 3u5t_A           23 MMET-NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGK---------ALTAQADVSDPAAV   92 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHH
T ss_pred             cccC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe---------EEEEEcCCCCHHHH
Confidence            4456 89999999999999999999999999999885 5556677777777655444         8999999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        93 ~~~~~~   98 (267)
T 3u5t_A           93 RRLFAT   98 (267)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988764

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.64  E-value=7.5e-16  Score=92.51  Aligned_cols=74  Identities=20%  Similarity=0.259  Sum_probs=60.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc---cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHH
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE---EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTK   77 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~   77 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|..   +.++.+.+++...+..         +.++.+|++|++
T Consensus         7 ~~l~-~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~d~~   76 (262)
T 3ksu_A            7 HDLK-NKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAK---------VALYQSDLSNEE   76 (262)
T ss_dssp             SCCT-TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCE---------EEEEECCCCSHH
T ss_pred             cCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCc---------EEEEECCCCCHH
Confidence            3567 89999999999999999999999999999987754   3455555566544333         899999999999


Q ss_pred             H-HHHhhh
Q 034737           78 F-ALAFLR   84 (85)
Q Consensus        78 ~-~~~~~~   84 (85)
                      + ++++++
T Consensus        77 ~v~~~~~~   84 (262)
T 3ksu_A           77 EVAKLFDF   84 (262)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            9 988764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.64  E-value=8.9e-16  Score=91.45  Aligned_cols=70  Identities=36%  Similarity=0.507  Sum_probs=61.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+.++....++   +..         +.++.+|++|+++ ++
T Consensus         3 ~l~-gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dv~~~~~v~~   69 (247)
T 3rwb_A            3 RLA-GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKK---------ARAIAADISDPGSVKA   69 (247)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTT---------EEECCCCTTCHHHHHH
T ss_pred             CcC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc---------eEEEEcCCCCHHHHHH
Confidence            467 999999999999999999999999999999999988777766655   233         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        70 ~~~~   73 (247)
T 3rwb_A           70 LFAE   73 (247)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.64  E-value=1.7e-15  Score=89.75  Aligned_cols=67  Identities=25%  Similarity=0.338  Sum_probs=59.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++.   ..         +.++.+|++|+++ ++++++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~---------~~~~~~D~~~~~~v~~~~~~   70 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---NA---------VIGIVADLAHHEDVDVAFAA   70 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GG---------EEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---CC---------ceEEECCCCCHHHHHHHHHH
Confidence            7899999999999999999999999999999999888777766662   23         8999999999999 888764

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.64  E-value=1.5e-15  Score=91.61  Aligned_cols=73  Identities=33%  Similarity=0.497  Sum_probs=61.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++++. +..+...+++...+..         +.++.+|++|+++ +
T Consensus        28 ~l~-gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~Dv~d~~~v~   97 (271)
T 3v2g_A           28 SLA-GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGR---------AVAIRADNRDAEAIE   97 (271)
T ss_dssp             CCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---------EEEEECCCCCHHHHH
Confidence            467 89999999999999999999999999999997654 5566777777655444         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        98 ~~~~~  102 (271)
T 3v2g_A           98 QAIRE  102 (271)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.64  E-value=5.7e-16  Score=93.65  Aligned_cols=73  Identities=23%  Similarity=0.277  Sum_probs=61.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+++.++...+++...+ .         +.++.+|++|+++ +
T Consensus        25 ~~l~-~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~---------~~~~~~Dv~d~~~v~   93 (276)
T 2b4q_A           25 FSLA-GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-D---------CQAIPADLSSEAGAR   93 (276)
T ss_dssp             TCCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-C---------EEECCCCTTSHHHHH
T ss_pred             cCCC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-c---------eEEEEeeCCCHHHHH
Confidence            4567 8999999999999999999999999999999999877777666654321 2         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        94 ~~~~~   98 (276)
T 2b4q_A           94 RLAQA   98 (276)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.64  E-value=1.6e-15  Score=90.80  Aligned_cols=74  Identities=26%  Similarity=0.300  Sum_probs=63.3

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++...+..         +.++.+|++++++ +
T Consensus        10 ~~l~-~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   79 (266)
T 1xq1_A           10 WSLK-AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ---------VTGSVCDASLRPERE   79 (266)
T ss_dssp             TCCT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTSHHHHH
T ss_pred             CCCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------eEEEECCCCCHHHHH
Confidence            4567 899999999999999999999999999999999988777777776554333         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        80 ~~~~~   84 (266)
T 1xq1_A           80 KLMQT   84 (266)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88753

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.64  E-value=1.5e-15  Score=91.94  Aligned_cols=72  Identities=26%  Similarity=0.352  Sum_probs=61.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +. +|+++|||+++|||++++++|+++|++|+++++ +.+..+...+++...+..         +.++++|++|+++ ++
T Consensus        27 ~~-~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~d~~~v~~   96 (280)
T 4da9_A           27 KA-RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR---------VIFLRADLADLSSHQA   96 (280)
T ss_dssp             CC-CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCC---------EEEEECCTTSGGGHHH
T ss_pred             cC-CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCc---------EEEEEecCCCHHHHHH
Confidence            45 899999999999999999999999999999995 666677777777655444         8999999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        97 ~~~~  100 (280)
T 4da9_A           97 TVDA  100 (280)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.64  E-value=1.6e-15  Score=89.44  Aligned_cols=71  Identities=23%  Similarity=0.268  Sum_probs=61.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++......        ++.++.+|++|+++ ++++++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--------~~~~~~~D~~~~~~v~~~~~~   73 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV--------EVFYHHLDVSKAESVEEFSKK   73 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--------CEEEEECCTTCHHHHHHHCC-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC--------eEEEEEeccCCHHHHHHHHHH
Confidence            789999999999999999999999999999999998888888877643322        28999999999999 888763

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.64  E-value=9.7e-16  Score=93.02  Aligned_cols=71  Identities=18%  Similarity=0.203  Sum_probs=60.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++   ..         ++.++.+|++|+++ ++
T Consensus        13 ~l~-gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~---------~~~~~~~Dl~d~~~v~~   79 (291)
T 3rd5_A           13 SFA-QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AG---------QVEVRELDLQDLSSVRR   79 (291)
T ss_dssp             CCT-TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SS---------EEEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cC---------CeeEEEcCCCCHHHHHH
Confidence            466 899999999999999999999999999999999987776665544   22         28999999999999 99


Q ss_pred             HhhhC
Q 034737           81 AFLRL   85 (85)
Q Consensus        81 ~~~~~   85 (85)
                      +++++
T Consensus        80 ~~~~~   84 (291)
T 3rd5_A           80 FADGV   84 (291)
T ss_dssp             HHHTC
T ss_pred             HHHhc
Confidence            88753

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.64  E-value=2.4e-15  Score=89.99  Aligned_cols=69  Identities=22%  Similarity=0.263  Sum_probs=60.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|+++.++.+.+++   +..         +.++.+|++|+++ +++
T Consensus         6 l~-gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dv~~~~~v~~~   72 (255)
T 4eso_A            6 YQ-GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPR---------VHALRSDIADLNEIAVL   72 (255)
T ss_dssp             TT-TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGG---------EEEEECCTTCHHHHHHH
T ss_pred             CC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc---------ceEEEccCCCHHHHHHH
Confidence            56 899999999999999999999999999999999988777766655   233         8999999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        73 ~~~   75 (255)
T 4eso_A           73 GAA   75 (255)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.64  E-value=1.1e-15  Score=92.53  Aligned_cols=74  Identities=22%  Similarity=0.236  Sum_probs=60.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++| +.+..+...+++....        +.++.++.+|++|+++ +
T Consensus        22 ~l~-~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~   92 (281)
T 3v2h_A           22 SMM-TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS--------SGTVLHHPADMTKPSEIA   92 (281)
T ss_dssp             CCT-TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC--------SSCEEEECCCTTCHHHHH
T ss_pred             ccC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc--------CCcEEEEeCCCCCHHHHH
Confidence            466 899999999999999999999999999999999 5556666666665431        1238999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        93 ~~~~~   97 (281)
T 3v2h_A           93 DMMAM   97 (281)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.63  E-value=1.9e-15  Score=90.32  Aligned_cols=75  Identities=20%  Similarity=0.209  Sum_probs=63.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHh---CCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAG---KGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~---~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      +|. +|+++|||+++|||++++++|++   +|++|++++|+++.++.+.+++...++.       .++.++.+|++|+++
T Consensus         3 ~l~-~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-------~~~~~~~~Dv~~~~~   74 (259)
T 1oaa_A            3 GLG-CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPD-------LKVVLAAADLGTEAG   74 (259)
T ss_dssp             CCB-SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTT-------SEEEEEECCTTSHHH
T ss_pred             CCC-CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCC-------CeEEEEecCCCCHHH
Confidence            466 89999999999999999999999   8999999999998888887777654211       128899999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       ++++++
T Consensus        75 v~~~~~~   81 (259)
T 1oaa_A           75 VQRLLSA   81 (259)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             888764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.63  E-value=2.3e-15  Score=93.68  Aligned_cols=73  Identities=26%  Similarity=0.381  Sum_probs=61.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-------hHHHHHHHHHHhhhccCCCCCCceEEEEecCC
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-------GNEVAALVEKENAKFHSNLGFPSAMFIRCDVT   74 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~   74 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+.       ++...+++...+..         +.++.+|++
T Consensus        42 ~l~-gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~---------~~~~~~Dv~  111 (346)
T 3kvo_A           42 RLA-GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK---------ALPCIVDVR  111 (346)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCE---------EEEEECCTT
T ss_pred             CCC-CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCe---------EEEEEccCC
Confidence            356 8999999999999999999999999999999998764       55666666655444         899999999


Q ss_pred             CHHH-HHHhhh
Q 034737           75 NTKF-ALAFLR   84 (85)
Q Consensus        75 ~~~~-~~~~~~   84 (85)
                      |+++ ++++++
T Consensus       112 d~~~v~~~~~~  122 (346)
T 3kvo_A          112 DEQQISAAVEK  122 (346)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            9999 988764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.63  E-value=1.2e-15  Score=92.57  Aligned_cols=71  Identities=27%  Similarity=0.349  Sum_probs=61.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH-HH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT-KF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~-~~~~~   83 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+.++.+...+++...+.        .++.++.+|++|+ ++ +++++
T Consensus        12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--------~~~~~~~~Dl~~~~~~v~~~~~   83 (311)
T 3o26_A           12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH--------ENVVFHQLDVTDPIATMSSLAD   83 (311)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--------CSEEEEECCTTSCHHHHHHHHH
T ss_pred             CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--------CceEEEEccCCCcHHHHHHHHH
Confidence            89999999999999999999999999999999999888888888765432        2389999999998 77 77765


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      .
T Consensus        84 ~   84 (311)
T 3o26_A           84 F   84 (311)
T ss_dssp             H
T ss_pred             H
Confidence            3

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.63  E-value=2.5e-15  Score=89.94  Aligned_cols=70  Identities=34%  Similarity=0.489  Sum_probs=60.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||+++|||++++++|+++|++|++++|+.+.++....++   ...         +.++.+|++|+++ ++
T Consensus         5 ~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~v~~   71 (259)
T 4e6p_A            5 RLE-GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPA---------AYAVQMDVTRQDSIDA   71 (259)
T ss_dssp             TTT-TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTT---------EEEEECCTTCHHHHHH
T ss_pred             cCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---------ceEEEeeCCCHHHHHH
Confidence            356 899999999999999999999999999999999988777766655   222         7899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        72 ~~~~   75 (259)
T 4e6p_A           72 AIAA   75 (259)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.63  E-value=3e-15  Score=90.96  Aligned_cols=73  Identities=22%  Similarity=0.429  Sum_probs=63.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH-hhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE-NAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++... +..         +.++.+|++|+++ +
T Consensus        23 ~l~-~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~---------~~~~~~Dl~~~~~~~   92 (302)
T 1w6u_A           23 SFQ-GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK---------VHAIQCDVRDPDMVQ   92 (302)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSC---------EEEEECCTTCHHHHH
T ss_pred             cCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCc---------eEEEEeCCCCHHHHH
Confidence            456 899999999999999999999999999999999988887777777654 333         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        93 ~~~~~   97 (302)
T 1w6u_A           93 NTVSE   97 (302)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87754

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.63  E-value=1.2e-15  Score=91.48  Aligned_cols=66  Identities=24%  Similarity=0.402  Sum_probs=56.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||++++++|+++|++|++++++++.++...+    ....         +.++++|++|+++ ++++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~~~~---------~~~~~~Dv~~~~~v~~~v~~   68 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----ERPN---------LFYFHGDVADPLTLKKFVEY   68 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----TCTT---------EEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hcCC---------EEEEEecCCCHHHHHHHHHH
Confidence            6899999999999999999999999999999999766554332    2233         8899999999999 998764

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.63  E-value=2.3e-15  Score=90.64  Aligned_cols=70  Identities=26%  Similarity=0.375  Sum_probs=59.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++   +..         +.++.+|++|+++ ++
T Consensus        24 ~l~-gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dv~d~~~v~~   90 (266)
T 3grp_A           24 KLT-GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKD---------VFVFSANLSDRKSIKQ   90 (266)
T ss_dssp             CCT-TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSS---------EEEEECCTTSHHHHHH
T ss_pred             ccC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc---------eEEEEeecCCHHHHHH
Confidence            466 899999999999999999999999999999999987776665443   223         8999999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        91 ~~~~   94 (266)
T 3grp_A           91 LAEV   94 (266)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.63  E-value=1.9e-15  Score=91.04  Aligned_cols=74  Identities=26%  Similarity=0.330  Sum_probs=63.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+.+...+..         +.++.+|++|+++ +
T Consensus        30 ~~l~-~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~   99 (279)
T 3ctm_A           30 FSLK-GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH---------SKAYKCNISDPKSVE   99 (279)
T ss_dssp             GCCT-TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSC---------EEEEECCTTCHHHHH
T ss_pred             cCCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------ceEEEeecCCHHHHH
Confidence            4567 899999999999999999999999999999999988777776666544333         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus       100 ~~~~~  104 (279)
T 3ctm_A          100 ETISQ  104 (279)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87754

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.63  E-value=2.6e-15  Score=91.34  Aligned_cols=72  Identities=38%  Similarity=0.583  Sum_probs=58.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+.+. .+...+.+...+..         +.++.+|++|+++ ++
T Consensus        45 l~-gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~d~~~v~~  114 (291)
T 3ijr_A           45 LK-GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK---------CVLLPGDLSDEQHCKD  114 (291)
T ss_dssp             TT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCC---------EEEEESCTTSHHHHHH
T ss_pred             CC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCc---------EEEEECCCCCHHHHHH
Confidence            56 8999999999999999999999999999999998764 33344444433333         8999999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus       115 ~~~~  118 (291)
T 3ijr_A          115 IVQE  118 (291)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.63  E-value=1.7e-15  Score=90.75  Aligned_cols=70  Identities=26%  Similarity=0.382  Sum_probs=61.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++|||++++++|+++|++|+++ +|+.+..+...+++...+..         +.++.+|++|+++ +++++
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~~~~~   74 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK---------VLVVKANVGQPAKIKEMFQ   74 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCC---------EEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHHHHHH
Confidence            8999999999999999999999999999987 78888888887777654444         8999999999999 88876


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        75 ~   75 (258)
T 3oid_A           75 Q   75 (258)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.63  E-value=1.6e-15  Score=91.78  Aligned_cols=70  Identities=29%  Similarity=0.402  Sum_probs=60.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++   +..         +.++.+|++|+++ ++
T Consensus        26 ~l~-gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dv~d~~~v~~   92 (277)
T 3gvc_A           26 DLA-GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCG---------AAACRVDVSDEQQIIA   92 (277)
T ss_dssp             -CT-TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSS---------CEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCc---------ceEEEecCCCHHHHHH
Confidence            356 899999999999999999999999999999999988777766655   223         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        93 ~~~~   96 (277)
T 3gvc_A           93 MVDA   96 (277)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.63  E-value=2.6e-15  Score=89.95  Aligned_cols=73  Identities=30%  Similarity=0.403  Sum_probs=61.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++| +.+..+...+++...+..         +.++.+|++|+++ 
T Consensus        17 ~~~~-~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~   86 (274)
T 1ja9_A           17 KPLA-GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ---------GVAIQADISKPSEV   86 (274)
T ss_dssp             CTTT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---------EEEEECCTTSHHHH
T ss_pred             CCCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCc---------EEEEEecCCCHHHH
Confidence            4567 899999999999999999999999999999999 666666666666544433         8899999999999 


Q ss_pred             HHHhh
Q 034737           79 ALAFL   83 (85)
Q Consensus        79 ~~~~~   83 (85)
                      +++++
T Consensus        87 ~~~~~   91 (274)
T 1ja9_A           87 VALFD   91 (274)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88876

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.63  E-value=2.6e-15  Score=89.87  Aligned_cols=72  Identities=26%  Similarity=0.340  Sum_probs=61.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-hHHHHHHHHHH-hhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-GNEVAALVEKE-NAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+++. .+.+.+++... +..         +.++.+|++|+++ +
T Consensus         2 l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~v~   71 (260)
T 1x1t_A            2 LK-GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK---------VLYDGADLSKGEAVR   71 (260)
T ss_dssp             CT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSC---------EEEECCCTTSHHHHH
T ss_pred             CC-CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCc---------EEEEECCCCCHHHHH
Confidence            56 8999999999999999999999999999999999877 77777776554 333         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        72 ~~~~~   76 (260)
T 1x1t_A           72 GLVDN   76 (260)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.63  E-value=2.9e-15  Score=90.15  Aligned_cols=73  Identities=26%  Similarity=0.363  Sum_probs=61.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++++ .+..+...+++...+..         +.++.+|++|+++ +
T Consensus        15 ~l~-~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~   84 (270)
T 3is3_A           15 RLD-GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSD---------AIAIKADIRQVPEIV   84 (270)
T ss_dssp             CCT-TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---------EEEEECCTTSHHHHH
T ss_pred             CcC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHH
Confidence            366 8999999999999999999999999999998765 45567777777655444         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        85 ~~~~~   89 (270)
T 3is3_A           85 KLFDQ   89 (270)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.63  E-value=3.1e-15  Score=88.49  Aligned_cols=73  Identities=30%  Similarity=0.421  Sum_probs=62.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH-hhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE-NAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++... +..         +.++.+|++|+++ +
T Consensus         4 ~~~-~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   73 (248)
T 2pnf_A            4 KLQ-GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVK---------AHGVEMNLLSEESIN   73 (248)
T ss_dssp             CCT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCC---------EEEEECCTTCHHHHH
T ss_pred             ccC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCc---------eEEEEccCCCHHHHH
Confidence            456 899999999999999999999999999999999988777776666542 223         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        74 ~~~~~   78 (248)
T 2pnf_A           74 KAFEE   78 (248)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.63  E-value=2.2e-15  Score=92.70  Aligned_cols=72  Identities=28%  Similarity=0.344  Sum_probs=62.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC----------ccchHHHHHHHHHHhhhccCCCCCCceEEEEec
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS----------EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCD   72 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~D   72 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+          .+..+...+++...+..         +.++.+|
T Consensus        25 l~-gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~D   94 (322)
T 3qlj_A           25 VD-GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGE---------AVADGSN   94 (322)
T ss_dssp             TT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCE---------EEEECCC
T ss_pred             cC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCc---------EEEEECC
Confidence            55 8999999999999999999999999999999987          56677777777655544         8999999


Q ss_pred             CCCHHH-HHHhhh
Q 034737           73 VTNTKF-ALAFLR   84 (85)
Q Consensus        73 v~~~~~-~~~~~~   84 (85)
                      ++|+++ ++++++
T Consensus        95 v~d~~~v~~~~~~  107 (322)
T 3qlj_A           95 VADWDQAAGLIQT  107 (322)
T ss_dssp             TTSHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            999999 888764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.62  E-value=4e-15  Score=88.84  Aligned_cols=71  Identities=35%  Similarity=0.501  Sum_probs=61.2

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++   +..         +.++.+|++|+++ +
T Consensus         8 ~~~~-~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~v~   74 (265)
T 2o23_A            8 RSVK-GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNN---------CVFAPADVTSEKDVQ   74 (265)
T ss_dssp             CCCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTT---------EEEEECCTTCHHHHH
T ss_pred             cCCC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCc---------eEEEEcCCCCHHHHH
Confidence            5677 899999999999999999999999999999999988777666554   223         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        75 ~~~~~   79 (265)
T 2o23_A           75 TALAL   79 (265)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.62  E-value=2.8e-15  Score=89.16  Aligned_cols=72  Identities=28%  Similarity=0.374  Sum_probs=61.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +. +|+++|||+++|||++++++|+++|++|+++++. .+..+...+++...+..         +.++.+|++|+++ ++
T Consensus         2 l~-~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~d~~~v~~   71 (246)
T 3osu_A            2 KM-TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVD---------SFAIQANVADADEVKA   71 (246)
T ss_dssp             CC-SCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSC---------EEEEECCTTCHHHHHH
T ss_pred             CC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHHH
Confidence            45 8999999999999999999999999999998874 46677777777655444         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        72 ~~~~   75 (246)
T 3osu_A           72 MIKE   75 (246)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.62  E-value=2.6e-15  Score=92.67  Aligned_cols=74  Identities=23%  Similarity=0.239  Sum_probs=57.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-----cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-----EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.     +.++.+.+.+...+..         +.++.+|++|
T Consensus         1 M~m~-~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~---------~~~~~~Dvtd   70 (324)
T 3u9l_A            1 MVMS-KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVD---------LRTLELDVQS   70 (324)
T ss_dssp             -----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCC---------EEEEECCTTC
T ss_pred             CCCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCc---------EEEEEeecCC
Confidence            7788 99999999999999999999999999999888763     3445555555444444         8999999999


Q ss_pred             HHH-HHHhhh
Q 034737           76 TKF-ALAFLR   84 (85)
Q Consensus        76 ~~~-~~~~~~   84 (85)
                      +++ ++++++
T Consensus        71 ~~~v~~~~~~   80 (324)
T 3u9l_A           71 QVSVDRAIDQ   80 (324)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            999 888764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.62  E-value=3.2e-15  Score=88.83  Aligned_cols=72  Identities=24%  Similarity=0.306  Sum_probs=62.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+ ++..+.+.+++...+..         +.++.+|++|+++ ++
T Consensus         5 l~-~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~   74 (258)
T 3afn_B            5 LK-GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGD---------AAFFAADLATSEACQQ   74 (258)
T ss_dssp             GT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCE---------EEEEECCTTSHHHHHH
T ss_pred             CC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCc---------eEEEECCCCCHHHHHH
Confidence            56 8999999999999999999999999999999998 77777777777654433         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        75 ~~~~   78 (258)
T 3afn_B           75 LVDE   78 (258)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.62  E-value=3.1e-15  Score=91.93  Aligned_cols=72  Identities=31%  Similarity=0.434  Sum_probs=59.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC------------ccchHHHHHHHHHHhhhccCCCCCCceEEEE
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS------------EEKGNEVAALVEKENAKFHSNLGFPSAMFIR   70 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   70 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++++            .+.++...+.+...+..         +.++.
T Consensus        44 l~-gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  113 (317)
T 3oec_A           44 LQ-GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR---------IIARQ  113 (317)
T ss_dssp             TT-TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCC---------EEEEE
T ss_pred             cC-CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCe---------EEEEE
Confidence            56 8999999999999999999999999999999876            34455555555444333         89999


Q ss_pred             ecCCCHHH-HHHhhh
Q 034737           71 CDVTNTKF-ALAFLR   84 (85)
Q Consensus        71 ~Dv~~~~~-~~~~~~   84 (85)
                      +|++|+++ ++++++
T Consensus       114 ~Dv~d~~~v~~~~~~  128 (317)
T 3oec_A          114 ADVRDLASLQAVVDE  128 (317)
T ss_dssp             CCTTCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHH
Confidence            99999999 888764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.62  E-value=1.5e-15  Score=91.13  Aligned_cols=69  Identities=17%  Similarity=0.148  Sum_probs=54.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+.....   +...  .         +.++.+|++|+++ +
T Consensus        23 m~l~-~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~---------~~~~~~Dv~~~~~v~   87 (260)
T 3gem_A           23 MTLS-SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQA--G---------AVALYGDFSCETGIM   87 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHHH--T---------CEEEECCTTSHHHHH
T ss_pred             cCCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHhc--C---------CeEEECCCCCHHHHH
Confidence            5677 99999999999999999999999999999999998754332   2221  2         6889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        88 ~~~~~   92 (260)
T 3gem_A           88 AFIDL   92 (260)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.62  E-value=1.2e-15  Score=92.82  Aligned_cols=74  Identities=19%  Similarity=0.236  Sum_probs=64.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC---EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV---FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~---~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |. +|+++|||+++|||++++++|+++|+   +|++++|+.+.++.+.+++...++.       .++.++.+|++|+++ 
T Consensus        31 l~-~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~-------~~~~~~~~Dv~d~~~v  102 (287)
T 3rku_A           31 LA-KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN-------AKVHVAQLDITQAEKI  102 (287)
T ss_dssp             HT-TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTT-------CEEEEEECCTTCGGGH
T ss_pred             cC-CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCC-------CeEEEEECCCCCHHHH
Confidence            56 89999999999999999999999988   9999999999888888888765322       228999999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus       103 ~~~~~~  108 (287)
T 3rku_A          103 KPFIEN  108 (287)
T ss_dssp             HHHHHT
T ss_pred             HHHHHH
Confidence            988875

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.62  E-value=3.7e-15  Score=88.99  Aligned_cols=70  Identities=27%  Similarity=0.449  Sum_probs=60.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+++..+.+.+++...+..         +.++.+|++|+++ ++++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~v~~~~~~   72 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH---------AVAVKVDVSDRDQVFAAVEQ   72 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEecCCCHHHHHHHHHH
Confidence            689999999999999999999999999999999988777777776544333         8899999999999 888763

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.62  E-value=2.5e-15  Score=90.51  Aligned_cols=76  Identities=22%  Similarity=0.243  Sum_probs=61.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++.++.+.+++.....      .+.++.++.+|++|+++ ++
T Consensus         3 ~~~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~   75 (278)
T 1spx_A            3 RFA-EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV------SEQNVNSVVADVTTDAGQDE   75 (278)
T ss_dssp             TTT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC------CGGGEEEEECCTTSHHHHHH
T ss_pred             CCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccc------CCCceeEEecccCCHHHHHH
Confidence            366 89999999999999999999999999999999998877777666632110      01128899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        76 ~~~~   79 (278)
T 1spx_A           76 ILST   79 (278)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.62  E-value=2.1e-15  Score=91.88  Aligned_cols=73  Identities=37%  Similarity=0.531  Sum_probs=59.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc--cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE--EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++++.  ...+.+.+.+...+..         +.++.+|++|+++ 
T Consensus        46 ~l~-~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~d~~~v  115 (294)
T 3r3s_A           46 RLK-DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRK---------AVLLPGDLSDESFA  115 (294)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCC---------EEECCCCTTSHHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCc---------EEEEEecCCCHHHH
Confidence            456 89999999999999999999999999999998873  3455555555544433         8999999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus       116 ~~~~~~  121 (294)
T 3r3s_A          116 RSLVHK  121 (294)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888764

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.61  E-value=5.8e-15  Score=87.67  Aligned_cols=71  Identities=30%  Similarity=0.351  Sum_probs=59.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCce-EEEEecCCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSA-MFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~Dv~~~~~-   78 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++   +..         + .++.+|++|+++ 
T Consensus         7 ~~~~-~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~~D~~~~~~~   73 (254)
T 2wsb_A            7 FRLD-GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAA---------VAARIVADVTDAEAM   73 (254)
T ss_dssp             TCCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGG---------EEEEEECCTTCHHHH
T ss_pred             cCCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---ccc---------ceeEEEEecCCHHHH
Confidence            4466 899999999999999999999999999999999987766665555   222         6 889999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        74 ~~~~~~   79 (254)
T 2wsb_A           74 TAAAAE   79 (254)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887753

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.61  E-value=3.1e-15  Score=90.57  Aligned_cols=73  Identities=19%  Similarity=0.186  Sum_probs=61.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++..+.+.+++...+..         +.++.+|++|+++ ++
T Consensus        41 ~l~-~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~d~~~v~~  110 (285)
T 2c07_A           41 CGE-NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE---------SSGYAGDVSKKEEISE  110 (285)
T ss_dssp             CCS-SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCC---------EEEEECCTTCHHHHHH
T ss_pred             cCC-CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCc---------eeEEECCCCCHHHHHH
Confidence            456 899999999999999999999999999999999887777777666543333         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus       111 ~~~~  114 (285)
T 2c07_A          111 VINK  114 (285)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8753

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.61  E-value=2.6e-15  Score=91.01  Aligned_cols=73  Identities=26%  Similarity=0.312  Sum_probs=60.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHH-HhhhccCCCCCCceEEEEecCCC----
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEK-ENAKFHSNLGFPSAMFIRCDVTN----   75 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~Dv~~----   75 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+. +..+.+.+++.. .+..         +.++.+|++|    
T Consensus        20 ~l~-~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~---------~~~~~~Dv~~~~~~   89 (288)
T 2x9g_A           20 HME-APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNT---------AVVCQADLTNSNVL   89 (288)
T ss_dssp             --C-CCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTC---------EEEEECCCSCSTTH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCc---------eEEEEeecCCccCC
Confidence            466 89999999999999999999999999999999998 777777777652 2222         8899999999    


Q ss_pred             HHH-HHHhhh
Q 034737           76 TKF-ALAFLR   84 (85)
Q Consensus        76 ~~~-~~~~~~   84 (85)
                      +++ ++++++
T Consensus        90 ~~~v~~~~~~   99 (288)
T 2x9g_A           90 PASCEEIINS   99 (288)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            888 887763

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.61  E-value=2.1e-15  Score=91.00  Aligned_cols=71  Identities=27%  Similarity=0.241  Sum_probs=58.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++|+.+..+.....+   ...         +.++.+|++|+++ +
T Consensus         1 M~~~-~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dv~~~~~~~   67 (281)
T 3m1a_A            1 MSES-AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDR---------AEAISLDVTDGERID   67 (281)
T ss_dssp             ---C-CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTT---------EEEEECCTTCHHHHH
T ss_pred             CCCC-CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCC---------ceEEEeeCCCHHHHH
Confidence            6777 899999999999999999999999999999999988777655433   222         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        68 ~~~~~   72 (281)
T 3m1a_A           68 VVAAD   72 (281)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.61  E-value=3.5e-15  Score=89.79  Aligned_cols=72  Identities=22%  Similarity=0.256  Sum_probs=60.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHH-hhhccCCCCCCceEEEEecCCCH----
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKE-NAKFHSNLGFPSAMFIRCDVTNT----   76 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~Dv~~~----   76 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++| +++.++.+.+++... +..         +.++.+|++|+    
T Consensus         9 ~~-~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~   78 (276)
T 1mxh_A            9 SE-CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGS---------AVLCKGDLSLSSSLL   78 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTC---------EEEEECCCSSSTTHH
T ss_pred             cC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCc---------eEEEeccCCCccccH
Confidence            55 899999999999999999999999999999999 887777777777654 333         88999999999    


Q ss_pred             HH-HHHhhh
Q 034737           77 KF-ALAFLR   84 (85)
Q Consensus        77 ~~-~~~~~~   84 (85)
                      ++ ++++++
T Consensus        79 ~~~~~~~~~   87 (276)
T 1mxh_A           79 DCCEDIIDC   87 (276)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            88 877653

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.61  E-value=3.8e-15  Score=89.27  Aligned_cols=73  Identities=26%  Similarity=0.300  Sum_probs=62.8

Q ss_pred             CCCCcEEEEecCC-ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGA-SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~-~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +. +|+++|||++ +|||++++++|+++|++|++++|+.+..+...+++...+.        .++.++.+|++|+++ ++
T Consensus        20 l~-~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--------~~~~~~~~Dl~~~~~v~~   90 (266)
T 3o38_A           20 LK-GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGL--------GRVEAVVCDVTSTEAVDA   90 (266)
T ss_dssp             TT-TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCS--------SCEEEEECCTTCHHHHHH
T ss_pred             CC-CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC--------CceEEEEeCCCCHHHHHH
Confidence            56 8999999997 5999999999999999999999999888888877754332        238999999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        91 ~~~~   94 (266)
T 3o38_A           91 LITQ   94 (266)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.61  E-value=2.4e-15  Score=91.46  Aligned_cols=66  Identities=24%  Similarity=0.331  Sum_probs=56.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCccchHHHHHHHHH-HhhhccCCCCCCceEEEEecCCCHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEK-ENAKFHSNLGFPSAMFIRCDVTNTK   77 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~Dv~~~~   77 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++ |+.+.++.+.+++.. .+..         +.++.+|+++++
T Consensus         6 ~l~-~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~---------~~~~~~Dl~~~~   73 (291)
T 1e7w_A            6 APT-VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS---------AITVQADLSNVA   73 (291)
T ss_dssp             --C-CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTC---------EEEEECCCSSSC
T ss_pred             CCC-CCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCe---------eEEEEeecCCcc
Confidence            466 89999999999999999999999999999999 998888877777752 2223         889999999998

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.61  E-value=4.1e-15  Score=89.09  Aligned_cols=75  Identities=23%  Similarity=0.309  Sum_probs=59.2

Q ss_pred             CCCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            1 MELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      |++. +|+++|||++  +|||++++++|+++|++|++++|+....+...+.....+.        .++.++.+|++|+++
T Consensus         3 ~~l~-~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~   73 (266)
T 3oig_A            3 FSLE-GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR--------NDSIILPCDVTNDAE   73 (266)
T ss_dssp             SCCT-TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS--------CCCEEEECCCSSSHH
T ss_pred             cccC-CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC--------CCceEEeCCCCCHHH
Confidence            3567 9999999999  6699999999999999999999987554444443332221        138999999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       ++++++
T Consensus        74 v~~~~~~   80 (266)
T 3oig_A           74 IETCFAS   80 (266)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             988764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.61  E-value=5.1e-15  Score=89.40  Aligned_cols=72  Identities=29%  Similarity=0.327  Sum_probs=59.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+ +..+...+++...+..         +.++.+|++|+++ +
T Consensus        27 ~~l~-gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~---------~~~~~~Dv~d~~~v~   95 (273)
T 3uf0_A           27 FSLA-GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGS---------AEAVVADLADLEGAA   95 (273)
T ss_dssp             TCCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCE---------EEEEECCTTCHHHHH
T ss_pred             cCCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCc---------EEEEEecCCCHHHHH
Confidence            3567 8999999999999999999999999999999965 4455666666544433         8999999999999 8


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++.+
T Consensus        96 ~~~~   99 (273)
T 3uf0_A           96 NVAE   99 (273)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7744

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.61  E-value=5.3e-15  Score=88.23  Aligned_cols=75  Identities=32%  Similarity=0.421  Sum_probs=61.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+......+++......        ++.++.+|++|+++ +
T Consensus        10 ~~~~-~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--------~~~~~~~Dl~~~~~~~   80 (265)
T 1h5q_A           10 ISFV-NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV--------KTKAYQCDVSNTDIVT   80 (265)
T ss_dssp             ECCT-TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTC--------CEEEEECCTTCHHHHH
T ss_pred             cccC-CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCC--------eeEEEEeeCCCHHHHH
Confidence            3566 899999999999999999999999999999999876666555555443221        28899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        81 ~~~~~   85 (265)
T 1h5q_A           81 KTIQQ   85 (265)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87764

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.61  E-value=4.6e-15  Score=89.79  Aligned_cols=73  Identities=30%  Similarity=0.398  Sum_probs=62.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +++++|||+++|||++++++|+++|++|++++|+++.++...+++...+..        ++.++.+|++|+++ +++
T Consensus        26 ~~-~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--------~~~~~~~Dl~d~~~v~~~   96 (286)
T 1xu9_A           26 LQ-GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA--------SAHYIAGTMEDMTFAEQF   96 (286)
T ss_dssp             GT-TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCS--------EEEEEECCTTCHHHHHHH
T ss_pred             cC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCC--------ceEEEeCCCCCHHHHHHH
Confidence            55 899999999999999999999999999999999998888777777654431        28899999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        97 ~~~   99 (286)
T 1xu9_A           97 VAQ   99 (286)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.61  E-value=2.6e-15  Score=89.26  Aligned_cols=69  Identities=32%  Similarity=0.376  Sum_probs=58.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+++.++...+++     .         +.++.+|++|+++ +
T Consensus         1 m~l~-~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~---------~~~~~~D~~~~~~~~   65 (245)
T 1uls_A            1 MRLK-DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----G---------AHPVVMDVADPASVE   65 (245)
T ss_dssp             CTTT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----T---------CEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----C---------CEEEEecCCCHHHHH
Confidence            7788 999999999999999999999999999999999976655544322     1         6788999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        66 ~~~~~   70 (245)
T 1uls_A           66 RGFAE   70 (245)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87764

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.61  E-value=4.9e-15  Score=89.63  Aligned_cols=73  Identities=29%  Similarity=0.435  Sum_probs=60.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      ++. +|+++|||+++|||++++++|+++|++|++++|+.+. .+...+++...+..         +.++.+|++|+++ +
T Consensus        26 ~~~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~   95 (283)
T 1g0o_A           26 SLE-GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD---------AACVKANVGVVEDIV   95 (283)
T ss_dssp             CCT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCC---------eEEEEcCCCCHHHHH
Confidence            456 8999999999999999999999999999999998754 45555555544333         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        96 ~~~~~  100 (283)
T 1g0o_A           96 RMFEE  100 (283)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87754

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.61  E-value=8.9e-16  Score=91.73  Aligned_cols=65  Identities=29%  Similarity=0.412  Sum_probs=55.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ||+++|||+++|||++++++|++.|++|++++|+++.++..               ...++..+.+|++|+++ ++++++
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~---------------~~~~~~~~~~Dv~~~~~v~~~~~~   75 (242)
T 4b79_A           11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP---------------RHPRIRREELDITDSQRLQRLFEA   75 (242)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC---------------CCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh---------------hcCCeEEEEecCCCHHHHHHHHHh
Confidence            99999999999999999999999999999999998755421               11238999999999999 998875


Q ss_pred             C
Q 034737           85 L   85 (85)
Q Consensus        85 ~   85 (85)
                      +
T Consensus        76 ~   76 (242)
T 4b79_A           76 L   76 (242)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.60  E-value=4.4e-15  Score=88.54  Aligned_cols=73  Identities=23%  Similarity=0.345  Sum_probs=61.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++| +.+..+...+++...+..         +.++.+|++|+++ +
T Consensus         4 ~l~-~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~   73 (261)
T 1gee_A            4 DLE-GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE---------AIAVKGDVTVESDVI   73 (261)
T ss_dssp             GGT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCE---------EEEEECCTTSHHHHH
T ss_pred             CCC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCc---------eEEEECCCCCHHHHH
Confidence            356 899999999999999999999999999999999 776677766666544333         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        74 ~~~~~   78 (261)
T 1gee_A           74 NLVQS   78 (261)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87763

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.60  E-value=7.1e-15  Score=87.52  Aligned_cols=70  Identities=27%  Similarity=0.429  Sum_probs=57.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|++ +..+.   .+...+..         +.++.+|++|+++ +
T Consensus         4 ~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~---------~~~~~~Dv~~~~~v~   70 (249)
T 2ew8_A            4 RLK-DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRR---------VLTVKCDVSQPGDVE   70 (249)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCC---------EEEEECCTTCHHHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCc---------EEEEEeecCCHHHHH
Confidence            366 89999999999999999999999999999999987 55443   33322222         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        71 ~~~~~   75 (249)
T 2ew8_A           71 AFGKQ   75 (249)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88753

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.60  E-value=1.2e-14  Score=88.64  Aligned_cols=73  Identities=23%  Similarity=0.339  Sum_probs=59.3

Q ss_pred             CCCCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            1 MELKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      |+|. +|+++|||+++  |||++++++|+++|++|++++|+++..+...+... ....         +.++.+|++|+++
T Consensus        26 ~~l~-~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~---------~~~~~~Dv~d~~~   94 (296)
T 3k31_A           26 MLME-GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAE-SLGV---------KLTVPCDVSDAES   94 (296)
T ss_dssp             CTTT-TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH-HHTC---------CEEEECCTTCHHH
T ss_pred             hccC-CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH-hcCC---------eEEEEcCCCCHHH
Confidence            3466 89999999986  99999999999999999999999765554444333 3333         6899999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       ++++++
T Consensus        95 v~~~~~~  101 (296)
T 3k31_A           95 VDNMFKV  101 (296)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             988764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.60  E-value=3.8e-15  Score=88.89  Aligned_cols=79  Identities=30%  Similarity=0.400  Sum_probs=58.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++...+...  ..+..++.++.+|++|+++ +++
T Consensus         5 ~~-~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~   81 (264)
T 2pd6_A            5 LR-SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKE--GPPRGNHAAFQADVSEARAARCL   81 (264)
T ss_dssp             CT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC--------------CCEEEECCTTSHHHHHHH
T ss_pred             cC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccc--cccCcceEEEEecCCCHHHHHHH
Confidence            56 8999999999999999999999999999999999877766665554332100  0011238899999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      ++.
T Consensus        82 ~~~   84 (264)
T 2pd6_A           82 LEQ   84 (264)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.60  E-value=3.1e-15  Score=90.37  Aligned_cols=69  Identities=33%  Similarity=0.394  Sum_probs=59.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++.   ..         +.++.+|++|+++ +++
T Consensus        26 ~~-~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~---------~~~~~~Dv~d~~~v~~~   92 (272)
T 4dyv_A           26 TG-KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG---DD---------ALCVPTDVTDPDSVRAL   92 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---SC---------CEEEECCTTSHHHHHHH
T ss_pred             CC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---CC---------eEEEEecCCCHHHHHHH
Confidence            45 8999999999999999999999999999999999887777666552   22         8899999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        93 ~~~   95 (272)
T 4dyv_A           93 FTA   95 (272)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.60  E-value=6.3e-15  Score=88.32  Aligned_cols=70  Identities=31%  Similarity=0.442  Sum_probs=59.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++.   ..         +.++.+|++|+++ ++
T Consensus         4 ~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~---------~~~~~~D~~~~~~v~~   70 (260)
T 1nff_A            4 RLT-GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DA---------ARYVHLDVTQPAQWKA   70 (260)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GG---------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh---cC---------ceEEEecCCCHHHHHH
Confidence            356 8999999999999999999999999999999999877666555442   12         7889999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        71 ~~~~   74 (260)
T 1nff_A           71 AVDT   74 (260)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.59  E-value=5.1e-15  Score=88.47  Aligned_cols=70  Identities=39%  Similarity=0.545  Sum_probs=59.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc--hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK--GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+.+.  ++...+++...+..         +.++.+|++|+++ ++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~~~~   72 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK---------AVFVGLDVTDKANFDSAI   72 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCC---------EEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHHHHH
Confidence            7899999999999999999999999999999998876  66666666543333         8899999999999 8887


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      ++
T Consensus        73 ~~   74 (258)
T 3a28_C           73 DE   74 (258)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.59  E-value=8.8e-15  Score=87.75  Aligned_cols=74  Identities=36%  Similarity=0.534  Sum_probs=60.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++.....       +.++.++.+|++|+++ +++
T Consensus         5 ~~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-------~~~~~~~~~D~~~~~~v~~~   76 (267)
T 2gdz_A            5 VN-GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-------PQKTLFIQCDVADQQQLRDT   76 (267)
T ss_dssp             CT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC-------GGGEEEEECCTTSHHHHHHH
T ss_pred             cC-CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcC-------CCceEEEecCCCCHHHHHHH
Confidence            45 89999999999999999999999999999999998777666665543211       1128899999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      ++.
T Consensus        77 ~~~   79 (267)
T 2gdz_A           77 FRK   79 (267)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.59  E-value=6.9e-15  Score=87.85  Aligned_cols=70  Identities=26%  Similarity=0.366  Sum_probs=59.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++   +..         +.++.+|++|+++ ++
T Consensus         2 ~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~~   68 (254)
T 1hdc_A            2 DLS-GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDA---------ARYQHLDVTIEEDWQR   68 (254)
T ss_dssp             CCC-CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGG---------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc---------eeEEEecCCCHHHHHH
Confidence            466 899999999999999999999999999999999987666655444   223         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        69 ~~~~   72 (254)
T 1hdc_A           69 VVAY   72 (254)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.59  E-value=8.5e-15  Score=88.30  Aligned_cols=74  Identities=27%  Similarity=0.317  Sum_probs=62.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+.+..+.+.+++...+..       ..+.++.+|++|+++ +++
T Consensus        30 l~-~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~v~~~  101 (279)
T 1xg5_A           30 WR-DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP-------GTLIPYRCDLSNEEDILSM  101 (279)
T ss_dssp             GT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS-------SEEEEEECCTTCHHHHHHH
T ss_pred             cC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCC-------ceEEEEEecCCCHHHHHHH
Confidence            56 899999999999999999999999999999999988877777777654321       127889999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus       102 ~~~  104 (279)
T 1xg5_A          102 FSA  104 (279)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            763

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.59  E-value=6e-15  Score=88.00  Aligned_cols=70  Identities=37%  Similarity=0.593  Sum_probs=59.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++   +..         +.++.+|++|+++ ++
T Consensus         3 ~l~-~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~v~~   69 (253)
T 1hxh_A            3 RLQ-GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GER---------SMFVRHDVSSEADWTL   69 (253)
T ss_dssp             TTT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTT---------EEEECCCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCc---------eEEEEccCCCHHHHHH
Confidence            466 899999999999999999999999999999999987766665554   223         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus        70 ~~~~   73 (253)
T 1hxh_A           70 VMAA   73 (253)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.59  E-value=8.8e-15  Score=88.97  Aligned_cols=78  Identities=26%  Similarity=0.314  Sum_probs=63.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++......    ..+.++.++.+|++|+++ ++
T Consensus        15 ~l~-~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~D~~~~~~v~~   89 (303)
T 1yxm_A           15 LLQ-GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP----TKQARVIPIQCNIRNEEEVNN   89 (303)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCT----TCCCCEEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccc----cCCccEEEEecCCCCHHHHHH
Confidence            356 899999999999999999999999999999999988887777777542110    112338999999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus        90 ~~~~   93 (303)
T 1yxm_A           90 LVKS   93 (303)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.59  E-value=3.9e-15  Score=89.16  Aligned_cols=70  Identities=34%  Similarity=0.475  Sum_probs=58.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++..   .         +.++.+|++|+++ ++
T Consensus         9 ~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~---------~~~~~~D~~d~~~v~~   75 (263)
T 3ak4_A            9 DLS-GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN---G---------GFAVEVDVTKRASVDA   75 (263)
T ss_dssp             CCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT---C---------CEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---C---------CeEEEEeCCCHHHHHH
Confidence            466 89999999999999999999999999999999998766554443321   2         7889999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        76 ~~~~   79 (263)
T 3ak4_A           76 AMQK   79 (263)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.59  E-value=1e-14  Score=86.45  Aligned_cols=74  Identities=27%  Similarity=0.333  Sum_probs=61.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecC--CCHHH-
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDV--TNTKF-   78 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv--~~~~~-   78 (85)
                      .|. +|+++|||+++|||++++++|+++|++|++++|+++.++...+++...+..        ...++.+|+  ++.++ 
T Consensus        11 ~l~-~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--------~~~~~~~d~d~~~~~~~   81 (247)
T 3i1j_A           11 LLK-GRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQP--------QPLIIALNLENATAQQY   81 (247)
T ss_dssp             TTT-TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSC--------CCEEEECCTTTCCHHHH
T ss_pred             cCC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCC--------CceEEEeccccCCHHHH
Confidence            356 899999999999999999999999999999999998888888888755422        166777777  99988 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        82 ~~~~~~   87 (247)
T 3i1j_A           82 RELAAR   87 (247)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887653

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.59  E-value=4.9e-15  Score=91.51  Aligned_cols=65  Identities=25%  Similarity=0.336  Sum_probs=55.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCccchHHHHHHHHHH-hhhccCCCCCCceEEEEecCCCHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKE-NAKFHSNLGFPSAMFIRCDVTNTK   77 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~Dv~~~~   77 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++ |+.+.++.+.+++... +..         +.++.+|++|++
T Consensus        44 l~-~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~---------~~~~~~Dl~d~~  110 (328)
T 2qhx_A           44 PT-VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS---------AITVQADLSNVA  110 (328)
T ss_dssp             -C-CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTC---------EEEEECCCSSSC
T ss_pred             cC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCe---------EEEEEeeCCCch
Confidence            56 89999999999999999999999999999999 9988888777777522 222         889999999998

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.59  E-value=1.1e-14  Score=87.09  Aligned_cols=72  Identities=22%  Similarity=0.259  Sum_probs=57.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++++... .+...+.+...+..         +.++.+|++|+++ ++
T Consensus         5 ~~-~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~v~~   74 (264)
T 3i4f_A            5 RF-VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEER---------LQFVQADVTKKEDLHK   74 (264)
T ss_dssp             -C-CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGG---------EEEEECCTTSHHHHHH
T ss_pred             cc-cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCc---------eEEEEecCCCHHHHHH
Confidence            45 7899999999999999999999999999999877654 34444433333333         8999999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        75 ~~~~   78 (264)
T 3i4f_A           75 IVEE   78 (264)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.58  E-value=9.8e-15  Score=87.17  Aligned_cols=70  Identities=21%  Similarity=0.185  Sum_probs=61.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHh-CCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAG-KGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~-~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++|||++++++|++ +|++|++++|+.+..+...+++...+..         +.++.+|++|+++ +++++
T Consensus         4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~~~~~~~   74 (276)
T 1wma_A            4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS---------PRFHQLDIDDLQSIRALRD   74 (276)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCC---------CEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCe---------eEEEECCCCCHHHHHHHHH
Confidence            78999999999999999999999 9999999999988777777777654333         8899999999999 88876


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        75 ~   75 (276)
T 1wma_A           75 F   75 (276)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.58  E-value=1.3e-14  Score=87.43  Aligned_cols=71  Identities=17%  Similarity=0.223  Sum_probs=59.0

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |. +|+++|||++  +|||++++++|+++|++|++++|+.+ .+...+++......         +.++.+|++|+++ +
T Consensus         4 l~-~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~---------~~~~~~D~~~~~~v~   72 (275)
T 2pd4_A            4 LK-GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS---------PYVYELDVSKEEHFK   72 (275)
T ss_dssp             TT-TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC---------CCEEECCTTCHHHHH
T ss_pred             CC-CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCC---------cEEEEcCCCCHHHHH
Confidence            66 8999999999  99999999999999999999999886 55555555543333         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        73 ~~~~~   77 (275)
T 2pd4_A           73 SLYNS   77 (275)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.58  E-value=5.4e-15  Score=88.83  Aligned_cols=70  Identities=37%  Similarity=0.453  Sum_probs=58.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++.++...+++.   ..         +.++.+|++|+++ ++
T Consensus         3 ~l~-~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~---------~~~~~~D~~~~~~v~~   69 (263)
T 2a4k_A            3 RLS-GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE---AE---------AIAVVADVSDPKAVEA   69 (263)
T ss_dssp             TTT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC---SS---------EEEEECCTTSHHHHHH
T ss_pred             CCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---Cc---------eEEEEcCCCCHHHHHH
Confidence            466 8999999999999999999999999999999999876665544332   22         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        70 ~~~~   73 (263)
T 2a4k_A           70 VFAE   73 (263)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.58  E-value=9.5e-15  Score=87.68  Aligned_cols=72  Identities=24%  Similarity=0.314  Sum_probs=60.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +. +|+++|||+++|||++++++|+++|++|++. .|+.+..+...+++...+..         +.++.+|++|+++ ++
T Consensus        24 l~-~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~~~~   93 (267)
T 4iiu_A           24 AM-SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGN---------GRLLSFDVANREQCRE   93 (267)
T ss_dssp             -C-CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHHH
T ss_pred             cC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCc---------eEEEEecCCCHHHHHH
Confidence            45 8999999999999999999999999999765 46666777777777665544         8999999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        94 ~~~~   97 (267)
T 4iiu_A           94 VLEH   97 (267)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.58  E-value=9.7e-15  Score=87.84  Aligned_cols=70  Identities=31%  Similarity=0.345  Sum_probs=60.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++|||++++++|+++|++|+++ .++.+..+...+++...+..         +.++.+|++|+++ +++++
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~v~~~~~   96 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGE---------AVAIPGDVGNAADIAAMFS   96 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCE---------EEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHHHHHH
Confidence            7899999999999999999999999999877 67777777777777655444         8999999999999 88876


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        97 ~   97 (272)
T 4e3z_A           97 A   97 (272)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.58  E-value=8.1e-15  Score=88.12  Aligned_cols=70  Identities=23%  Similarity=0.225  Sum_probs=57.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++|||++++++|+++|++|++++ ++.+..+....++...+..         +.++.+|++|+++ +++++
T Consensus        25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~v~~~~~   95 (269)
T 3gk3_A           25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRD---------FKAYAVDVADFESCERCAE   95 (269)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCC---------CEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCc---------eEEEEecCCCHHHHHHHHH
Confidence            89999999999999999999999999999998 4555555555555433333         8999999999999 88876


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        96 ~   96 (269)
T 3gk3_A           96 K   96 (269)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.58  E-value=4e-15  Score=89.70  Aligned_cols=64  Identities=23%  Similarity=0.356  Sum_probs=53.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|+ ||+++|||+++|||++++++|+++|++|++++|+.++.          ..         +..++++|++++++ +
T Consensus         7 ~~L~-GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~---------~~~~~~~Dv~~~~~v~   66 (261)
T 4h15_A            7 LNLR-GKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------LP---------EELFVEADLTTKEGCA   66 (261)
T ss_dssp             CCCT-TCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SC---------TTTEEECCTTSHHHHH
T ss_pred             cCCC-CCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------CC---------cEEEEEcCCCCHHHHH
Confidence            4678 99999999999999999999999999999999976421          01         14578999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        67 ~~~~~   71 (261)
T 4h15_A           67 IVAEA   71 (261)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.58  E-value=1e-14  Score=87.07  Aligned_cols=70  Identities=27%  Similarity=0.404  Sum_probs=57.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+.+  +...+++...+..         +.++.+|++|+++ +++
T Consensus         2 l~-~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~---------~~~~~~D~~~~~~v~~~   69 (255)
T 2q2v_A            2 LK-GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVK---------AVHHPADLSDVAQIEAL   69 (255)
T ss_dssp             CT-TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCC---------EEEECCCTTSHHHHHHH
T ss_pred             CC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCc---------eEEEeCCCCCHHHHHHH
Confidence            56 899999999999999999999999999999999876  4444455432222         8899999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        70 ~~~   72 (255)
T 2q2v_A           70 FAL   72 (255)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            763

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.58  E-value=1.2e-14  Score=86.11  Aligned_cols=70  Identities=30%  Similarity=0.317  Sum_probs=59.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH-HHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV-EKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++ ...+..         +.++.+|++|+++ +++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~   72 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADK---------VLRVRADVADEGDVNAAIA   72 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGG---------EEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCc---------EEEEEecCCCHHHHHHHHH
Confidence            689999999999999999999999999999999987777666655 222333         8899999999999 88876


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        73 ~   73 (250)
T 2cfc_A           73 A   73 (250)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.58  E-value=9.5e-15  Score=87.71  Aligned_cols=73  Identities=26%  Similarity=0.424  Sum_probs=59.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++...          .++.++.+|++|+++ +
T Consensus        12 ~~l~-~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~   80 (278)
T 2bgk_A           12 NRLQ-DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP----------DVISFVHCDVTKDEDVR   80 (278)
T ss_dssp             CTTT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----------TTEEEEECCTTCHHHHH
T ss_pred             cccc-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC----------CceEEEECCCCCHHHHH
Confidence            3566 899999999999999999999999999999999876665554444211          128999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        81 ~~~~~   85 (278)
T 2bgk_A           81 NLVDT   85 (278)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.57  E-value=1e-14  Score=86.52  Aligned_cols=72  Identities=25%  Similarity=0.367  Sum_probs=59.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++... .         .+.++.+|++|+++ ++
T Consensus         3 ~~~-~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~---------~~~~~~~D~~~~~~~~~   71 (251)
T 1zk4_A            3 RLD-GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-D---------QIQFFQHDSSDEDGWTK   71 (251)
T ss_dssp             TTT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-T---------TEEEEECCTTCHHHHHH
T ss_pred             CCC-CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-C---------ceEEEECCCCCHHHHHH
Confidence            466 899999999999999999999999999999999987666655544221 1         28899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus        72 ~~~~   75 (251)
T 1zk4_A           72 LFDA   75 (251)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7764

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.57  E-value=1.1e-14  Score=86.79  Aligned_cols=70  Identities=20%  Similarity=0.137  Sum_probs=59.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++|||++++++|+++|++|++++ ++.+..+....++...+..         +.++.+|++|.++ +++++
T Consensus        13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~~~~~   83 (256)
T 3ezl_A           13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFD---------FYASEGNVGDWDSTKQAFD   83 (256)
T ss_dssp             CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCC---------CEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCe---------eEEEecCCCCHHHHHHHHH
Confidence            89999999999999999999999999999888 6666777776666655444         8999999999999 88876


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        84 ~   84 (256)
T 3ezl_A           84 K   84 (256)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.57  E-value=1.9e-14  Score=86.29  Aligned_cols=71  Identities=20%  Similarity=0.263  Sum_probs=58.2

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |. +|+++|||++  +|||++++++|+++|++|++++|++ ..+...+++......         ..++.+|++|+++ +
T Consensus         7 l~-~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~v~   75 (265)
T 1qsg_A            7 LS-GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS---------DIVLQCDVAEDASID   75 (265)
T ss_dssp             TT-TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTC---------CCEEECCTTCHHHHH
T ss_pred             cC-CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCC---------cEEEEccCCCHHHHH
Confidence            56 8999999999  9999999999999999999999987 455555555443333         5789999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        76 ~~~~~   80 (265)
T 1qsg_A           76 TMFAE   80 (265)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.57  E-value=8e-15  Score=87.80  Aligned_cols=74  Identities=26%  Similarity=0.302  Sum_probs=61.3

Q ss_pred             CCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccch-HHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            2 ELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKG-NEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         2 ~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      ++. +|+++|||++  +|||++++++|+++|++|++++++.... +...+++......        ++.++.+|++|+++
T Consensus        17 ~l~-~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~~~Dl~~~~~   87 (267)
T 3gdg_A           17 SLK-GKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI--------KAKAYKCQVDSYES   87 (267)
T ss_dssp             CCT-TCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCC--------CEECCBCCTTCHHH
T ss_pred             CcC-CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCC--------ceeEEecCCCCHHH
Confidence            467 8999999999  8999999999999999999999887654 6666666544322        28999999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       ++++++
T Consensus        88 v~~~~~~   94 (267)
T 3gdg_A           88 CEKLVKD   94 (267)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             888764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.57  E-value=2.5e-14  Score=86.61  Aligned_cols=71  Identities=17%  Similarity=0.204  Sum_probs=58.4

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |. +|+++|||++  +|||++++++|+++|++|++++|+.+ .+...+++....+.         +.++.+|++|+++ +
T Consensus        19 l~-~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~v~   87 (285)
T 2p91_A           19 LE-GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGS---------DLVVKCDVSLDEDIK   87 (285)
T ss_dssp             TT-TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC---------CCEEECCTTCHHHHH
T ss_pred             cC-CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCC---------eEEEEcCCCCHHHHH
Confidence            66 8999999998  99999999999999999999999875 44455555443333         6789999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        88 ~~~~~   92 (285)
T 2p91_A           88 NLKKF   92 (285)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.56  E-value=3.7e-14  Score=86.35  Aligned_cols=72  Identities=17%  Similarity=0.191  Sum_probs=57.5

Q ss_pred             CCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            2 ELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         2 ~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      +|. +|+++|||++  +|||++++++|+++|++|++++|++...+. .+++......         +.++.+|++|+++ 
T Consensus        28 ~l~-gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~---------~~~~~~Dv~d~~~v   96 (293)
T 3grk_A           28 LLQ-GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKR-VEPLAEELGA---------FVAGHCDVADAASI   96 (293)
T ss_dssp             TTT-TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHH-HHHHHHHHTC---------EEEEECCTTCHHHH
T ss_pred             cCC-CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhcCC---------ceEEECCCCCHHHH
Confidence            356 8999999999  559999999999999999999998643333 3344444444         8899999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        97 ~~~~~~  102 (293)
T 3grk_A           97 DAVFET  102 (293)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988764

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.56  E-value=2.4e-14  Score=85.12  Aligned_cols=72  Identities=28%  Similarity=0.415  Sum_probs=61.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      |. +|+++|||+++|||++++++|+++|++|+++ .++.+..+....++...+..         +.++.+|+++.++ ++
T Consensus         5 l~-~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~   74 (255)
T 3icc_A            5 LK-GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS---------AFSIGANLESLHGVEA   74 (255)
T ss_dssp             TT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCE---------EEEEECCTTSHHHHHH
T ss_pred             cC-CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCc---------eEEEecCcCCHHHHHH
Confidence            45 8999999999999999999999999999886 56777777777777665544         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus        75 ~~~~   78 (255)
T 3icc_A           75 LYSS   78 (255)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.56  E-value=2.6e-14  Score=86.35  Aligned_cols=70  Identities=19%  Similarity=0.238  Sum_probs=58.2

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +. +|+++|||++  +|||++++++|+++|++|++++|+.  .+...+++......         +.++.+|++++++ +
T Consensus        24 l~-~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~v~   91 (280)
T 3nrc_A           24 LA-GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNP---------AAVLPCDVISDQEIK   91 (280)
T ss_dssp             TT-TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCC---------SEEEECCTTCHHHHH
T ss_pred             cC-CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCC---------ceEEEeecCCHHHHH
Confidence            55 8999999988  7799999999999999999999987  44445555544444         8899999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        92 ~~~~~   96 (280)
T 3nrc_A           92 DLFVE   96 (280)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.56  E-value=2.5e-14  Score=85.63  Aligned_cols=72  Identities=25%  Similarity=0.287  Sum_probs=58.6

Q ss_pred             CCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            2 ELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         2 ~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      +|. +|+++|||++  +|||++++++|+++|++|++++|+++ .+...+++......         +.++.+|++|+++ 
T Consensus         5 ~l~-~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~---------~~~~~~D~~~~~~v   73 (261)
T 2wyu_A            5 DLS-GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGG---------ALLFRADVTQDEEL   73 (261)
T ss_dssp             CCT-TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTC---------CEEEECCTTCHHHH
T ss_pred             CCC-CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCC---------cEEEECCCCCHHHH
Confidence            466 8999999998  99999999999999999999999875 44444455443333         7889999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        74 ~~~~~~   79 (261)
T 2wyu_A           74 DALFAG   79 (261)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888763

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.56  E-value=3.7e-14  Score=84.88  Aligned_cols=71  Identities=17%  Similarity=0.229  Sum_probs=57.9

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +. +|+++|||++  +|||++++++|+++|++|++++|+.... ...+++......         +.++.+|++|+++ +
T Consensus        12 ~~-~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~   80 (271)
T 3ek2_A           12 LD-GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFGS---------ELVFPCDVADDAQID   80 (271)
T ss_dssp             TT-TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHTTC---------CCEEECCTTCHHHHH
T ss_pred             cC-CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHHHHHHHHcCC---------cEEEECCCCCHHHHH
Confidence            45 8999999998  9999999999999999999999985433 334444444443         7899999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        81 ~~~~~   85 (271)
T 3ek2_A           81 ALFAS   85 (271)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.56  E-value=2.4e-14  Score=84.53  Aligned_cols=70  Identities=27%  Similarity=0.333  Sum_probs=59.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++|||++++++|+++|++|+++ +|+++..+...+++...+..         +.++.+|++|+++ +++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~   71 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ---------AITFGGDVSKEADVEAMMK   71 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCE---------EEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---------EEEEeCCCCCHHHHHHHHH
Confidence            5799999999999999999999999999985 78887777777777654444         8899999999999 88876


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        72 ~   72 (244)
T 1edo_A           72 T   72 (244)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.55  E-value=2.6e-14  Score=84.83  Aligned_cols=69  Identities=25%  Similarity=0.367  Sum_probs=59.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++.   ..         +.++.+|+++.++ .++
T Consensus        12 ~~-~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~---------~~~~~~D~~~~~~~~~~   78 (249)
T 3f9i_A           12 LT-GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DN---------YTIEVCNLANKEECSNL   78 (249)
T ss_dssp             CT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SS---------EEEEECCTTSHHHHHHH
T ss_pred             CC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cC---------ccEEEcCCCCHHHHHHH
Confidence            45 8999999999999999999999999999999999887777665553   22         8899999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        79 ~~~   81 (249)
T 3f9i_A           79 ISK   81 (249)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            764

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.55  E-value=3.2e-14  Score=84.75  Aligned_cols=74  Identities=20%  Similarity=0.201  Sum_probs=57.2

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH-HH
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT-KF   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~   78 (85)
                      |+|. +|+++|||+++|||++++++|+++|++ |++++|+...  ...+++.....       +.++.++.+|++|+ ++
T Consensus         1 m~l~-~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~-------~~~~~~~~~D~~~~~~~   70 (254)
T 1sby_A            1 MDLT-NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINP-------KVNITFHTYDVTVPVAE   70 (254)
T ss_dssp             CCCT-TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCT-------TSEEEEEECCTTSCHHH
T ss_pred             CCCC-CcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCC-------CceEEEEEEecCCChHH
Confidence            7788 999999999999999999999999996 9999998742  22233333221       12388999999998 88


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       ++++++
T Consensus        71 ~~~~~~~   77 (254)
T 1sby_A           71 SKKLLKK   77 (254)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             877653

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.55  E-value=3e-14  Score=85.86  Aligned_cols=69  Identities=30%  Similarity=0.457  Sum_probs=57.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++..+.+.+++    ..         +.++.+|++|+++ ++
T Consensus         6 ~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~---------~~~~~~Dv~d~~~v~~   71 (270)
T 1yde_A            6 RYA-GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PG---------AVFILCDVTQEDDVKT   71 (270)
T ss_dssp             TTT-TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TT---------EEEEECCTTSHHHHHH
T ss_pred             CCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cC---------CeEEEcCCCCHHHHHH
Confidence            356 899999999999999999999999999999999987665544433    12         7889999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        72 ~~~~   75 (270)
T 1yde_A           72 LVSE   75 (270)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.55  E-value=1.8e-14  Score=84.81  Aligned_cols=70  Identities=30%  Similarity=0.287  Sum_probs=56.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |... +|+++|||+++|||++++++|+++|++|++++|+++..+...+++.    .         +.++.+|++|+++ +
T Consensus         1 M~~~-~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~---------~~~~~~D~~~~~~~~   66 (234)
T 2ehd_A            1 MEGM-KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----G---------ALPLPGDVREEGDWA   66 (234)
T ss_dssp             ---C-CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----T---------CEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----h---------ceEEEecCCCHHHHH
Confidence            5566 7899999999999999999999999999999998876655544331    2         7889999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        67 ~~~~~   71 (234)
T 2ehd_A           67 RAVAA   71 (234)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.55  E-value=1.9e-14  Score=85.05  Aligned_cols=70  Identities=19%  Similarity=0.226  Sum_probs=60.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-------EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-------FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-------~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      +|+++|||+++|||++++++|+++|+       +|++++|+.+..+.+..++...+..         +.++.+|++|+++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~   72 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL---------TDTITADISDMAD   72 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCE---------EEEEECCTTSHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCe---------eeEEEecCCCHHH
Confidence            78999999999999999999999999       9999999988777777666543333         8899999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       ++++++
T Consensus        73 v~~~~~~   79 (244)
T 2bd0_A           73 VRRLTTH   79 (244)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             888763

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.55  E-value=2.5e-14  Score=86.36  Aligned_cols=68  Identities=22%  Similarity=0.298  Sum_probs=58.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      |+++|||+++|||++++++|+++|++|++++|+++.++.+.+++... ..         +.++.+|++|+++ ++++++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~---------~~~~~~Dv~d~~~v~~~~~~   90 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TR---------VLPLTLDVRDRAAMSAAVDN   90 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SC---------EEEEECCTTCHHHHHHHHHT
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-Cc---------EEEEEcCCCCHHHHHHHHHH
Confidence            78999999999999999999999999999999988777766665422 22         8899999999999 988765

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.55  E-value=1.7e-14  Score=86.21  Aligned_cols=68  Identities=38%  Similarity=0.453  Sum_probs=52.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+..   .+++   +..         +.++.+|++|+++ +
T Consensus         5 m~l~-~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~---~~~---------~~~~~~D~~~~~~v~   68 (257)
T 3tl3_A            5 MEIR-DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL---GDR---------ARFAAADVTDEAAVA   68 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT---CTT---------EEEEECCTTCHHHHH
T ss_pred             ceec-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc---CCc---------eEEEECCCCCHHHHH
Confidence            5677 99999999999999999999999999999999965422   2222   222         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        69 ~~~~~   73 (257)
T 3tl3_A           69 SALDL   73 (257)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.54  E-value=1.5e-14  Score=85.11  Aligned_cols=66  Identities=20%  Similarity=0.233  Sum_probs=56.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      |+++|||+++|||++++++|+++|++|++++|+++.++...+++   ...         +.++.+|++++++ ++++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~v~~~~~~   68 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNN---------VGYRARDLASHQEVEQLFEQ   68 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSC---------CCEEECCTTCHHHHHHHHHS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhc---------cCeEeecCCCHHHHHHHHHH
Confidence            57999999999999999999999999999999988777665544   222         8899999999999 988865

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.53  E-value=5.7e-14  Score=83.03  Aligned_cols=69  Identities=23%  Similarity=0.245  Sum_probs=56.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|++++.+.+.+++    ..         +.++.+|++|+++ +
T Consensus         3 ~~l~-~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~---------~~~~~~D~~~~~~~~   68 (244)
T 3d3w_A            3 LFLA-GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----PG---------IEPVCVDLGDWEATE   68 (244)
T ss_dssp             CCCT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT---------CEEEECCTTCHHHHH
T ss_pred             cccC-CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CC---------CCEEEEeCCCHHHHH
Confidence            4566 899999999999999999999999999999999986655544332    12         5677999999999 8


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus        69 ~~~~   72 (244)
T 3d3w_A           69 RALG   72 (244)
T ss_dssp             HHHT
T ss_pred             HHHH
Confidence            8775

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.53  E-value=7.1e-14  Score=83.50  Aligned_cols=68  Identities=34%  Similarity=0.507  Sum_probs=55.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+++. +...+++.             . .++.+|++|+++ +
T Consensus         2 ~~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-------------~-~~~~~D~~~~~~~~   65 (256)
T 2d1y_A            2 GLFA-GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-------------G-AFFQVDLEDERERV   65 (256)
T ss_dssp             CTTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-------------C-EEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-------------C-CEEEeeCCCHHHHH
Confidence            3567 8999999999999999999999999999999998865 44433331             1 578999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        66 ~~~~~   70 (256)
T 2d1y_A           66 RFVEE   70 (256)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87763

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.53  E-value=4.5e-14  Score=84.18  Aligned_cols=66  Identities=18%  Similarity=0.256  Sum_probs=56.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      |+++|||+++|||++++++|+++|++|++++|+.+.++.+.+++.   ..         +.++.+|++|+++ ++++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~---------~~~~~~Dv~~~~~v~~~~~~   67 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---DN---------LYIAQLDVRNRAAIEEMLAS   67 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TT---------EEEEECCTTCHHHHHHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---Cc---------eEEEEcCCCCHHHHHHHHHH
Confidence            579999999999999999999999999999999877766655542   22         8899999999999 988764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.52  E-value=6.9e-14  Score=83.59  Aligned_cols=71  Identities=18%  Similarity=0.166  Sum_probs=58.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCC---CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKG---VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g---~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      +. +|+++|||+++|||++++++|+++|   ++|++++|+.+..+.+ .++...+..         +.++.+|++++++ 
T Consensus        19 ~~-~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~---------~~~~~~Dl~~~~~v   87 (267)
T 1sny_A           19 SH-MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSN---------IHILEIDLRNFDAY   87 (267)
T ss_dssp             -C-CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTT---------EEEEECCTTCGGGH
T ss_pred             CC-CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCc---------eEEEEecCCChHHH
Confidence            45 8899999999999999999999999   9999999998776644 334333333         8999999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        88 ~~~~~~   93 (267)
T 1sny_A           88 DKLVAD   93 (267)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888763

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.52  E-value=5.9e-14  Score=82.85  Aligned_cols=70  Identities=24%  Similarity=0.375  Sum_probs=58.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEE-EEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMF-IRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~Dv~~~~~-~~~~   82 (85)
                      +|+++|||+++|||++++++|+++|++|+++ +|+++..+...+++...+..         +.+ +.+|++|+++ ++++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~~D~~~~~~~~~~~   71 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP---------LVAVLGANLLEAEAATALV   71 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCS---------CEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---------eEEEEeccCCCHHHHHHHH
Confidence            4689999999999999999999999999998 78887777776666544333         666 9999999999 8886


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      ++
T Consensus        72 ~~   73 (245)
T 2ph3_A           72 HQ   73 (245)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.52  E-value=1.6e-14  Score=86.67  Aligned_cols=64  Identities=16%  Similarity=0.166  Sum_probs=54.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||+++|||++++++|+++|++|++++|+.+.....         .         +.++.+|++|+++ ++
T Consensus        25 ~~~-~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---------~---------~~~~~~Dv~d~~~v~~   85 (260)
T 3un1_A           25 RNQ-QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---------D---------IHTVAGDISKPETADR   85 (260)
T ss_dssp             HTT-CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST---------T---------EEEEESCTTSHHHHHH
T ss_pred             CcC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC---------c---------eEEEEccCCCHHHHHH
Confidence            456 89999999999999999999999999999999987542211         2         8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        86 ~~~~   89 (260)
T 3un1_A           86 IVRE   89 (260)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.52  E-value=1.5e-14  Score=87.09  Aligned_cols=66  Identities=23%  Similarity=0.309  Sum_probs=54.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|+.+.++....               ..+.++.+|++|+++ +++
T Consensus        14 ~~-~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---------------~~~~~~~~Dv~d~~~v~~~   77 (266)
T 3p19_A           14 SM-KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL---------------PNTLCAQVDVTDKYTFDTA   77 (266)
T ss_dssp             -C-CCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC---------------TTEEEEECCTTCHHHHHHH
T ss_pred             CC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc---------------CCceEEEecCCCHHHHHHH
Confidence            45 8999999999999999999999999999999998765433211               128899999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        78 ~~~   80 (266)
T 3p19_A           78 ITR   80 (266)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.51  E-value=1.5e-13  Score=81.10  Aligned_cols=68  Identities=26%  Similarity=0.268  Sum_probs=56.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++    ..         +.++.+|++|+++ ++
T Consensus         4 ~~~-~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~---------~~~~~~D~~~~~~~~~   69 (244)
T 1cyd_A            4 NFS-GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PG---------IEPVCVDLGDWDATEK   69 (244)
T ss_dssp             CCT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT---------CEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cC---------CCcEEecCCCHHHHHH
Confidence            466 899999999999999999999999999999999986655443321    22         5677999999999 88


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus        70 ~~~   72 (244)
T 1cyd_A           70 ALG   72 (244)
T ss_dssp             HHT
T ss_pred             HHH
Confidence            775

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.50  E-value=7.7e-14  Score=82.34  Aligned_cols=67  Identities=22%  Similarity=0.228  Sum_probs=55.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      +|+++|||+++|||++++++|+++|  ++|++++|+.+..+.+.+.   .+         .++.++.+|++|+++ ++++
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~---~~---------~~~~~~~~D~~~~~~~~~~~   70 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KD---------SRVHVLPLTVTCDKSLDTFV   70 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CC---------TTEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc---cC---------CceEEEEeecCCHHHHHHHH
Confidence            7899999999999999999999999  9999999998776544321   11         238999999999999 8887


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      ++
T Consensus        71 ~~   72 (250)
T 1yo6_A           71 SK   72 (250)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.49  E-value=1.6e-13  Score=81.97  Aligned_cols=67  Identities=21%  Similarity=0.226  Sum_probs=56.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      +|+++|||+++|||++++++|+++|  +.|++++|+++.++.+.+++   +..         +.++.+|++|+++ ++++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dv~~~~~v~~~~   69 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDR---------FFYVVGDITEDSVLKQLV   69 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGG---------EEEEESCTTSHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCc---------eEEEECCCCCHHHHHHHH
Confidence            7899999999999999999999985  78999999987777666554   233         8999999999999 9887


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      ++
T Consensus        70 ~~   71 (254)
T 3kzv_A           70 NA   71 (254)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.49  E-value=6.7e-14  Score=83.12  Aligned_cols=67  Identities=31%  Similarity=0.303  Sum_probs=54.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|++++++.+. ++    ..         +.++.+|++|+++ ++
T Consensus         3 ~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~---------~~~~~~D~~~~~~~~~   67 (246)
T 2ag5_A            3 RLD-GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PG---------IQTRVLDVTKKKQIDQ   67 (246)
T ss_dssp             TTT-TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TT---------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cC---------ceEEEeeCCCHHHHHH
Confidence            466 899999999999999999999999999999999876544332 11    12         8899999999998 86


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus        68 ~~~   70 (246)
T 2ag5_A           68 FAN   70 (246)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.48  E-value=1.3e-13  Score=82.88  Aligned_cols=61  Identities=31%  Similarity=0.441  Sum_probs=53.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |. +|+++|||+++|||++++++|+++|++|++++|+++.           ...         +.++.+|++|+++ +++
T Consensus         6 l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~---------~~~~~~Dl~~~~~v~~~   64 (264)
T 2dtx_A            6 LR-DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAK---------YDHIECDVTNPDQVKAS   64 (264)
T ss_dssp             GT-TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCS---------SEEEECCTTCHHHHHHH
T ss_pred             cC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCc---------eEEEEecCCCHHHHHHH
Confidence            56 8999999999999999999999999999999998754           122         7889999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        65 ~~~   67 (264)
T 2dtx_A           65 IDH   67 (264)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            763

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.47  E-value=1.3e-13  Score=82.79  Aligned_cols=69  Identities=20%  Similarity=0.226  Sum_probs=55.4

Q ss_pred             CCCCcEEEEecC--CChHHHHHHHHHHhCCCEEEEEecCccc-hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            3 LKPGLSAFVTGG--ASGIGRALSLALAGKGVFVTVVDLSEEK-GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         3 l~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |. +|+++|||+  ++|||++++++|+++|++|++++|+.+. .+...+++   +.         ++.++.+|++|+++ 
T Consensus         5 l~-~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~---------~~~~~~~Dv~~~~~v   71 (269)
T 2h7i_A            5 LD-GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PA---------KAPLLELDVQNEEHL   71 (269)
T ss_dssp             TT-TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SS---------CCCEEECCTTCHHHH
T ss_pred             cC-CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CC---------CceEEEccCCCHHHH
Confidence            56 899999999  9999999999999999999999998754 23332221   11         27889999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        72 ~~~~~~   77 (269)
T 2h7i_A           72 ASLAGR   77 (269)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888764

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.46  E-value=2.4e-13  Score=81.92  Aligned_cols=62  Identities=35%  Similarity=0.372  Sum_probs=52.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|+.+...          ..         +.++.+|++|+++ +++
T Consensus        12 ~~-~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~---------~~~~~~Dv~~~~~v~~~   71 (269)
T 3vtz_A           12 FT-DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----------NV---------SDHFKIDVTNEEEVKEA   71 (269)
T ss_dssp             TT-TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----------TS---------SEEEECCTTCHHHHHHH
T ss_pred             CC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----------Cc---------eeEEEecCCCHHHHHHH
Confidence            45 899999999999999999999999999999999875431          12         6789999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        72 ~~~   74 (269)
T 3vtz_A           72 VEK   74 (269)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.46  E-value=1.8e-13  Score=81.89  Aligned_cols=62  Identities=32%  Similarity=0.444  Sum_probs=52.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +|+++|||+++|||++++++|+++|++|++++|+++..+.                    +.++.+|++|+++ ++
T Consensus        18 ~l~-~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------------------~~~~~~Dl~d~~~v~~   76 (253)
T 2nm0_A           18 SHM-SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG--------------------FLAVKCDITDTEQVEQ   76 (253)
T ss_dssp             --C-CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT--------------------SEEEECCTTSHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc--------------------ceEEEecCCCHHHHHH
Confidence            456 8999999999999999999999999999999998754321                    5788999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        77 ~~~~   80 (253)
T 2nm0_A           77 AYKE   80 (253)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.45  E-value=1.8e-13  Score=87.07  Aligned_cols=70  Identities=17%  Similarity=0.038  Sum_probs=57.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHh-CCCEEEEEecCccchH------------HHHHHHHHHhhhccCCCCCCceEEEEec
Q 034737            6 GLSAFVTGGASGIGRALSLALAG-KGVFVTVVDLSEEKGN------------EVAALVEKENAKFHSNLGFPSAMFIRCD   72 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~-~g~~v~~~~~~~~~~~------------~~~~~l~~~~~~~~~~~~~~~~~~~~~D   72 (85)
                      +|+++|||+++|||+++++.|+. .|++|++++++.+..+            ...+.+...+..         +..+.+|
T Consensus        61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~---------a~~i~~D  131 (422)
T 3s8m_A           61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLY---------SKSINGD  131 (422)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCC---------EEEEESC
T ss_pred             CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCc---------EEEEEec
Confidence            79999999999999999999999 9999999998765432            223444444433         8899999


Q ss_pred             CCCHHH-HHHhhh
Q 034737           73 VTNTKF-ALAFLR   84 (85)
Q Consensus        73 v~~~~~-~~~~~~   84 (85)
                      ++|+++ ++++++
T Consensus       132 vtd~~~v~~~v~~  144 (422)
T 3s8m_A          132 AFSDAARAQVIEL  144 (422)
T ss_dssp             TTSHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            999999 988764

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.45  E-value=2.2e-13  Score=84.13  Aligned_cols=76  Identities=26%  Similarity=0.151  Sum_probs=56.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||++++++|+++|++|++++++....+...+.+......   ...+.++.++.+|++|.++ ++++++
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dv~d~~~v~~~~~~   78 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL---ACPPGSLETLQLDVRDSKSVAAARER   78 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT---TCCTTSEEEEECCTTCHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhc---cCCCCceEEEEecCCCHHHHHHHHHH
Confidence            789999999999999999999999999888887665544444444322200   0011238899999999999 988875

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.45  E-value=3.7e-13  Score=80.12  Aligned_cols=64  Identities=31%  Similarity=0.350  Sum_probs=54.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|++++|+.+.        .  ...         +.++.+|++|+++ +
T Consensus         3 m~l~-~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~--~~~---------~~~~~~D~~d~~~~~   62 (250)
T 2fwm_X            3 MDFS-GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------E--QYP---------FATEVMDVADAAQVA   62 (250)
T ss_dssp             CCCT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------S--CCS---------SEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------h--cCC---------ceEEEcCCCCHHHHH
Confidence            6677 9999999999999999999999999999999998752        0  001         6788999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        63 ~~~~~   67 (250)
T 2fwm_X           63 QVCQR   67 (250)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.43  E-value=1e-12  Score=80.66  Aligned_cols=70  Identities=30%  Similarity=0.337  Sum_probs=58.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +++++|||++++||++++++|+++|++|++++|+..........+......        .+.++.+|++|+++ .++++
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--------~~~~~~~Dl~d~~~~~~~~~   75 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGK--------TPAFHETDVSDERALARIFD   75 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSC--------CCEEECCCTTCHHHHHHHHH
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCC--------CceEEEeecCCHHHHHHHHh
Confidence            689999999999999999999999999999999887666655555443221        18899999999999 88876

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.43  E-value=7e-13  Score=86.37  Aligned_cols=74  Identities=19%  Similarity=0.183  Sum_probs=60.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCE-EEEE-ecCc-------------cchHHHHHHHHHHhhhccCCCCCCceE
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVF-VTVV-DLSE-------------EKGNEVAALVEKENAKFHSNLGFPSAM   67 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~-~~~~-------------~~~~~~~~~l~~~~~~~~~~~~~~~~~   67 (85)
                      +.++++++|||+++|||.+++++|+++|++ |+++ +|+.             +..+.+..++...+..         +.
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---------v~  318 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGAT---------AT  318 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCE---------EE
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCE---------EE
Confidence            334899999999999999999999999997 6676 7873             4566777777766555         89


Q ss_pred             EEEecCCCHHH-HHHhhhC
Q 034737           68 FIRCDVTNTKF-ALAFLRL   85 (85)
Q Consensus        68 ~~~~Dv~~~~~-~~~~~~~   85 (85)
                      ++.+|++|+++ +++++++
T Consensus       319 ~~~~Dvtd~~~v~~~~~~i  337 (525)
T 3qp9_A          319 VVTCDLTDAEAAARLLAGV  337 (525)
T ss_dssp             EEECCTTSHHHHHHHHHTS
T ss_pred             EEECCCCCHHHHHHHHHHH
Confidence            99999999999 9988753

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.42  E-value=7.5e-13  Score=83.82  Aligned_cols=70  Identities=17%  Similarity=0.116  Sum_probs=56.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHh-CCCEEEEEecCccchH------------HHHHHHHHHhhhccCCCCCCceEEEEec
Q 034737            6 GLSAFVTGGASGIGRALSLALAG-KGVFVTVVDLSEEKGN------------EVAALVEKENAKFHSNLGFPSAMFIRCD   72 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~-~g~~v~~~~~~~~~~~------------~~~~~l~~~~~~~~~~~~~~~~~~~~~D   72 (85)
                      +|+++|||+++|||+++++.|+. .|++|++++++.+..+            ...+.+...+..         +.++.+|
T Consensus        47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~---------a~~i~~D  117 (405)
T 3zu3_A           47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLY---------AKSINGD  117 (405)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCC---------EEEEESC
T ss_pred             CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCc---------eEEEECC
Confidence            79999999999999999999999 9999999988764422            223344443333         8899999


Q ss_pred             CCCHHH-HHHhhh
Q 034737           73 VTNTKF-ALAFLR   84 (85)
Q Consensus        73 v~~~~~-~~~~~~   84 (85)
                      ++|+++ ++++++
T Consensus       118 vtd~~~v~~~v~~  130 (405)
T 3zu3_A          118 AFSDEIKQLTIDA  130 (405)
T ss_dssp             TTSHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            999999 988764

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.42  E-value=2.2e-12  Score=83.61  Aligned_cols=71  Identities=25%  Similarity=0.383  Sum_probs=59.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc---cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE---EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +++++|||+++|||.+++++|+++|+ +|++++|+.   +..+.+.+++...+..         +.++.||++|+++ .+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~---------v~~~~~Dvtd~~~v~~  309 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVR---------VTIAACDAADREALAA  309 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCE---------EEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCe---------EEEEEccCCCHHHHHH
Confidence            48999999999999999999999999 788888864   3456666677665544         8999999999999 99


Q ss_pred             HhhhC
Q 034737           81 AFLRL   85 (85)
Q Consensus        81 ~~~~~   85 (85)
                      +++++
T Consensus       310 ~~~~i  314 (496)
T 3mje_A          310 LLAEL  314 (496)
T ss_dssp             HHHTC
T ss_pred             HHHHH
Confidence            88753

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.41  E-value=6.8e-13  Score=78.92  Aligned_cols=62  Identities=31%  Similarity=0.368  Sum_probs=51.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+++..+.                    +..+.+|++|+++ ++
T Consensus        12 ~l~-~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--------------------~~~~~~D~~~~~~~~~   70 (247)
T 1uzm_A           12 PFV-SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG--------------------LFGVEVDVTDSDAVDR   70 (247)
T ss_dssp             CCC-CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT--------------------SEEEECCTTCHHHHHH
T ss_pred             cCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------------------hcCeeccCCCHHHHHH
Confidence            456 8999999999999999999999999999999998754321                    2347889999888 87


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        71 ~~~~   74 (247)
T 1uzm_A           71 AFTA   74 (247)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.40  E-value=1.7e-12  Score=82.71  Aligned_cols=70  Identities=17%  Similarity=0.155  Sum_probs=55.9

Q ss_pred             CcEEEEecCCChHHHH--HHHHHHhCCCEEEEEecCccc------------hHHHHHHHHHHhhhccCCCCCCceEEEEe
Q 034737            6 GLSAFVTGGASGIGRA--LSLALAGKGVFVTVVDLSEEK------------GNEVAALVEKENAKFHSNLGFPSAMFIRC   71 (85)
Q Consensus         6 ~~~~litG~~~gig~~--~~~~l~~~g~~v~~~~~~~~~------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   71 (85)
                      +|+++|||+++|||++  +++.|++.|++|++++++...            .+.+.+.+...+..         +.++.+
T Consensus        60 gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~~~~~~  130 (418)
T 4eue_A           60 PKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLV---------AKNFIE  130 (418)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCC---------EEEEES
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCc---------EEEEEe
Confidence            8999999999999999  999999999999999987543            23333333333333         889999


Q ss_pred             cCCCHHH-HHHhhh
Q 034737           72 DVTNTKF-ALAFLR   84 (85)
Q Consensus        72 Dv~~~~~-~~~~~~   84 (85)
                      |++|+++ ++++++
T Consensus       131 Dvtd~~~v~~~v~~  144 (418)
T 4eue_A          131 DAFSNETKDKVIKY  144 (418)
T ss_dssp             CTTCHHHHHHHHHH
T ss_pred             eCCCHHHHHHHHHH
Confidence            9999999 988764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.39  E-value=1.5e-12  Score=80.18  Aligned_cols=70  Identities=26%  Similarity=0.444  Sum_probs=54.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec---------CccchHHHHHHHHHHhhhccCCCCCCceEEEEe
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL---------SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRC   71 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   71 (85)
                      |+|. +|+++|||+++|||++++++|+++|++|+++++         +.+..+...+++...+..            ..+
T Consensus         5 ~~l~-gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~------------~~~   71 (319)
T 1gz6_A            5 LRFD-GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK------------AVA   71 (319)
T ss_dssp             CCCT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE------------EEE
T ss_pred             CCCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe------------EEE
Confidence            4577 999999999999999999999999999999754         556666666666543322            357


Q ss_pred             cCCCHHH-HHHhh
Q 034737           72 DVTNTKF-ALAFL   83 (85)
Q Consensus        72 Dv~~~~~-~~~~~   83 (85)
                      |+++.++ +++++
T Consensus        72 D~~~~~~~~~~~~   84 (319)
T 1gz6_A           72 NYDSVEAGEKLVK   84 (319)
T ss_dssp             ECCCGGGHHHHHH
T ss_pred             eCCCHHHHHHHHH
Confidence            9999888 77664

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.38  E-value=5e-13  Score=78.87  Aligned_cols=60  Identities=18%  Similarity=0.219  Sum_probs=50.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+++..+          ..         ..++.+|++|+++ ++++++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~---------~~~~~~D~~~~~~~~~~~~~   63 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DS---------NILVDGNKNWTEQEQSILEQ   63 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SE---------EEECCTTSCHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cc---------cEEEeCCCCCHHHHHHHHHH
Confidence            889999999999999999999999999999999876432          11         5677899999988 877653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.38  E-value=8e-13  Score=78.25  Aligned_cols=60  Identities=15%  Similarity=0.254  Sum_probs=51.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+++..+          ..         ..++.+|++|+++ ++++++
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~---------~~~~~~D~~~~~~v~~~~~~   67 (241)
T 1dhr_A            7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SA---------SVIVKMTDSFTEQADQVTAE   67 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SE---------EEECCCCSCHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CC---------cEEEEcCCCCHHHHHHHHHH
Confidence            899999999999999999999999999999999876432          11         5678899999998 887753

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.37  E-value=4.5e-12  Score=85.87  Aligned_cols=72  Identities=22%  Similarity=0.366  Sum_probs=61.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHH-hCCC-EEEEEecC---ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            5 PGLSAFVTGGASGIGRALSLALA-GKGV-FVTVVDLS---EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~-~~g~-~v~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      ++++++|||+++|||++++++|+ ++|+ +|++++|+   .+..+...+++...+..         +.++.||++|+++ 
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~---------v~~~~~Dvsd~~~v  599 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAE---------VSLQACDVADRETL  599 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCE---------EEEEECCTTCHHHH
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCc---------EEEEEeecCCHHHH
Confidence            48999999999999999999999 7998 58999998   44567777777765555         8999999999999 


Q ss_pred             HHHhhhC
Q 034737           79 ALAFLRL   85 (85)
Q Consensus        79 ~~~~~~~   85 (85)
                      +++++++
T Consensus       600 ~~~~~~~  606 (795)
T 3slk_A          600 AKVLASI  606 (795)
T ss_dssp             HHHHHTS
T ss_pred             HHHHHHH
Confidence            9988753

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.37  E-value=5.1e-13  Score=80.40  Aligned_cols=61  Identities=28%  Similarity=0.316  Sum_probs=48.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|. +|+++|||+++|||++++++|+++|++|++++|+.+....                    ...+.+|+++.++ ++
T Consensus        25 ~l~-gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~--------------------~~~~~~Dv~~~~~~~~   83 (266)
T 3uxy_A           25 GFE-GKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA--------------------DLHLPGDLREAAYADG   83 (266)
T ss_dssp             -CT-TCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC--------------------SEECCCCTTSHHHHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh--------------------hhccCcCCCCHHHHHH
Confidence            466 8999999999999999999999999999999997643211                    2334778888777 76


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus        84 ~~~   86 (266)
T 3uxy_A           84 LPG   86 (266)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.37  E-value=3.6e-12  Score=82.40  Aligned_cols=71  Identities=28%  Similarity=0.380  Sum_probs=59.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCcc---chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEE---KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      ++++++|||+++|||.+++++|+++|++ |++++|+..   ..+.+..++...+..         +.++.+|++|+++ .
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~---------v~~~~~Dv~d~~~v~  295 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGAR---------TTVAACDVTDRESVR  295 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCE---------EEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCE---------EEEEEeCCCCHHHHH
Confidence            4789999999999999999999999995 999999864   355566666554444         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus       296 ~~~~~  300 (486)
T 2fr1_A          296 ELLGG  300 (486)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            88765

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.37  E-value=2.2e-12  Score=85.25  Aligned_cols=71  Identities=28%  Similarity=0.374  Sum_probs=54.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec---------CccchHHHHHHHHHHhhhccCCCCCCceEEEEe
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL---------SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRC   71 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   71 (85)
                      ++|. +|+++|||+++|||++++++|+++|++|++++|         +.+.++...+++...+..            ..+
T Consensus        15 ~~l~-gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~~   81 (613)
T 3oml_A           15 LRYD-GRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE------------AVA   81 (613)
T ss_dssp             CCCT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC------------EEE
T ss_pred             cCCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe------------EEE
Confidence            4577 999999999999999999999999999999988         666677777777654432            247


Q ss_pred             cCCCHHH-HHHhhh
Q 034737           72 DVTNTKF-ALAFLR   84 (85)
Q Consensus        72 Dv~~~~~-~~~~~~   84 (85)
                      |++|.++ ++++++
T Consensus        82 D~~d~~~~~~~~~~   95 (613)
T 3oml_A           82 DYNSVIDGAKVIET   95 (613)
T ss_dssp             CCCCGGGHHHHHC-
T ss_pred             EeCCHHHHHHHHHH
Confidence            9999988 887764

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.36  E-value=1.9e-12  Score=95.97  Aligned_cols=72  Identities=13%  Similarity=0.032  Sum_probs=58.4

Q ss_pred             CCCCcEEEEecCCCh-HHHHHHHHHHhCCCEEEEEecCccc-----hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            3 LKPGLSAFVTGGASG-IGRALSLALAGKGVFVTVVDLSEEK-----GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         3 l~~~~~~litG~~~g-ig~~~~~~l~~~g~~v~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      |. +|+++|||+++| ||+++++.|++.|++|++++|+.+.     ++.+.+++...         +.++.++.+|++|+
T Consensus      2134 l~-gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~---------G~~~~~v~~Dvtd~ 2203 (3089)
T 3zen_D         2134 XX-DEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF---------DATLWVVPANMASY 2203 (3089)
T ss_dssp             CC-CCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT---------TCEEEEEECCTTCH
T ss_pred             CC-CCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc---------CCeEEEEEecCCCH
Confidence            56 999999999999 9999999999999999999998765     34444433222         23388999999999


Q ss_pred             HH-HHHhhh
Q 034737           77 KF-ALAFLR   84 (85)
Q Consensus        77 ~~-~~~~~~   84 (85)
                      ++ ++++++
T Consensus      2204 ~~v~~lv~~ 2212 (3089)
T 3zen_D         2204 SDIDKLVEW 2212 (3089)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            99 988764

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.36  E-value=8.6e-13  Score=79.15  Aligned_cols=61  Identities=21%  Similarity=0.301  Sum_probs=52.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||++++||++++++|+++|++|++++|++....         ...         +.++.+|++|+++ .++++.
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~---------~~~~~~Dl~d~~~~~~~~~~   64 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPN---------EECVQCDLADANAVNAMVAG   64 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTT---------EEEEECCTTCHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCC---------CEEEEcCCCCHHHHHHHHcC
Confidence            679999999999999999999999999999999875433         122         8999999999999 888754

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.36  E-value=7.1e-12  Score=76.15  Aligned_cols=71  Identities=25%  Similarity=0.268  Sum_probs=59.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|+|+++++.|+..|++|++++|+.++.+.+.+++... ..         +.++.+|++++++ +++
T Consensus       117 l~-gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~---------~~~~~~D~~~~~~~~~~  185 (287)
T 1lu9_A          117 VK-GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FK---------VNVTAAETADDASRAEA  185 (287)
T ss_dssp             CT-TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HT---------CCCEEEECCSHHHHHHH
T ss_pred             CC-CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CC---------cEEEEecCCCHHHHHHH
Confidence            56 899999999999999999999999999999999988887777776543 22         6778899999988 877


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      ++.
T Consensus       186 ~~~  188 (287)
T 1lu9_A          186 VKG  188 (287)
T ss_dssp             TTT
T ss_pred             HHh
Confidence            654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.36  E-value=4.1e-12  Score=91.39  Aligned_cols=78  Identities=13%  Similarity=0.111  Sum_probs=62.4

Q ss_pred             CCCCCCcEEEEecCCCh-HHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            1 MELKPGLSAFVTGGASG-IGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~g-ig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      |+|. +|+++|||+++| ||++++++|+.+|++|+++ .|+.+..+...+++......     .+.++.++.+|++|+++
T Consensus       671 m~l~-gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~-----~g~~v~~v~~DVsd~~s  744 (1887)
T 2uv8_A          671 VTFK-DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGA-----KGSTLIVVPFNQGSKQD  744 (1887)
T ss_dssp             BCCT-TCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCC-----TTCEEEEEECCTTCHHH
T ss_pred             CCCC-CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhc-----CCCeEEEEEecCCCHHH
Confidence            4567 999999999998 9999999999999999998 57777777766666443211     12238999999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       ++++++
T Consensus       745 V~alv~~  751 (1887)
T 2uv8_A          745 VEALIEF  751 (1887)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             988764

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.36  E-value=4.7e-12  Score=78.01  Aligned_cols=77  Identities=17%  Similarity=0.042  Sum_probs=57.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      .+. +++++|||++|+||.+++++|+++|++|++++|+..........+.......    ..+.+.++.+|++|+++ .+
T Consensus        22 ~~~-~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~   96 (351)
T 3ruf_A           22 IFS-PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTE----QWSRFCFIEGDIRDLTTCEQ   96 (351)
T ss_dssp             HHS-CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHH----HHTTEEEEECCTTCHHHHHH
T ss_pred             CCC-CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccc----cCCceEEEEccCCCHHHHHH
Confidence            345 7899999999999999999999999999999998765444444443221000    00128999999999998 88


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus        97 ~~~   99 (351)
T 3ruf_A           97 VMK   99 (351)
T ss_dssp             HTT
T ss_pred             Hhc
Confidence            765

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.35  E-value=2.6e-12  Score=78.83  Aligned_cols=74  Identities=20%  Similarity=0.205  Sum_probs=53.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH--HHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL--VEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      |.+. ++.++|||++++||.+++++|+++|++|+++.|+.+........  +......         +.++.+|++|+++
T Consensus         1 ~~~~-~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~d~~~   70 (337)
T 2c29_D            1 MGSQ-SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETH---------LTLWKADLADEGS   70 (337)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHH---------EEEEECCTTSTTT
T ss_pred             CCCC-CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCe---------EEEEEcCCCCHHH
Confidence            5667 89999999999999999999999999999999987644333221  1111122         7889999999988


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       .++++.
T Consensus        71 ~~~~~~~   77 (337)
T 2c29_D           71 FDEAIKG   77 (337)
T ss_dssp             THHHHTT
T ss_pred             HHHHHcC
Confidence             877653

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.35  E-value=5.2e-12  Score=90.78  Aligned_cols=78  Identities=15%  Similarity=0.131  Sum_probs=61.1

Q ss_pred             CCCCCCcEEEEecCCCh-HHHHHHHHHHhCCCEEEEEe-cCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            1 MELKPGLSAFVTGGASG-IGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~g-ig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      |+|. +|+++|||+++| ||++++++|+.+|++|++++ |+.+.......++......     .+.++.++.+|++|+++
T Consensus       648 m~L~-gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~-----~G~~v~~v~~DVsd~es  721 (1878)
T 2uv9_A          648 LTFQ-GKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGA-----RGSQLVVVPFNQGSKQD  721 (1878)
T ss_dssp             BCCT-TCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCC-----TTCEEEEEECCTTCHHH
T ss_pred             CCCC-CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhc-----cCCeEEEEEcCCCCHHH
Confidence            4577 899999999998 99999999999999999985 6666666665555433210     12238999999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       ++++++
T Consensus       722 V~alv~~  728 (1878)
T 2uv9_A          722 VEALVNY  728 (1878)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             988764

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.35  E-value=6.8e-12  Score=73.18  Aligned_cols=66  Identities=14%  Similarity=0.099  Sum_probs=54.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHH-hCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALA-GKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~-~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      .|+++|||++++||++++++|+ ..|++|++++|+++ +++.+.    .....         +.++.+|++|+++ .+++
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~---------~~~~~~D~~d~~~~~~~~   71 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHER---------VTVIEGSFQNPGXLEQAV   71 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTT---------EEEEECCTTCHHHHHHHH
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCc---------eEEEECCCCCHHHHHHHH
Confidence            4689999999999999999999 89999999999976 544432    12222         8999999999999 8877


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      +.
T Consensus        72 ~~   73 (221)
T 3r6d_A           72 TN   73 (221)
T ss_dssp             TT
T ss_pred             cC
Confidence            53

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.34  E-value=4.1e-12  Score=75.11  Aligned_cols=60  Identities=30%  Similarity=0.375  Sum_probs=49.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+++.   ..+++     .         +.++.+|+++ ++ +++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~-----~---------~~~~~~D~~~-~~~~~~~~   62 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL-----G---------AVPLPTDLEK-DDPKGLVK   62 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH-----T---------CEEEECCTTT-SCHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh-----C---------cEEEecCCch-HHHHHHHH
Confidence            6899999999999999999999999999999998764   22222     1         5788999999 77 76654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.33  E-value=4.7e-13  Score=79.38  Aligned_cols=62  Identities=24%  Similarity=0.261  Sum_probs=46.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      |+|. +|+++|||+++|||++++++|++ |+.|++++|+++..+...+     ...         +.++.+|+++..+
T Consensus         1 m~l~-~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~---------~~~~~~D~~~~~~   62 (245)
T 3e9n_A            1 MSLK-KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEG---------VEPIESDIVKEVL   62 (245)
T ss_dssp             ------CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STT---------EEEEECCHHHHHH
T ss_pred             CCCC-CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcC---------CcceecccchHHH
Confidence            7788 99999999999999999999988 8999999998876555432     112         7888899887754

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.33  E-value=1.4e-12  Score=76.40  Aligned_cols=39  Identities=31%  Similarity=0.378  Sum_probs=34.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      |++. +|+++|||+++|||++++++|+++|++|++++|+.
T Consensus         2 ~~~~-~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~   40 (223)
T 3uce_A            2 MGSD-KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQT   40 (223)
T ss_dssp             ---C-CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGG
T ss_pred             CCCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCc
Confidence            4677 99999999999999999999999999999998864

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.32  E-value=5.4e-12  Score=81.02  Aligned_cols=69  Identities=26%  Similarity=0.369  Sum_probs=53.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|+.. .+...+.....  .         +.++.+|++|.++ +++
T Consensus       211 l~-gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~-~~~l~~~~~~~--~---------~~~~~~Dvtd~~~v~~~  277 (454)
T 3u0b_A          211 LD-GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AEDLKRVADKV--G---------GTALTLDVTADDAVDKI  277 (454)
T ss_dssp             TT-TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG-HHHHHHHHHHH--T---------CEEEECCTTSTTHHHHH
T ss_pred             CC-CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHc--C---------CeEEEEecCCHHHHHHH
Confidence            45 899999999999999999999999999999998753 22222222221  2         6789999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus       278 ~~~  280 (454)
T 3u0b_A          278 TAH  280 (454)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.32  E-value=1.5e-11  Score=80.01  Aligned_cols=71  Identities=24%  Similarity=0.379  Sum_probs=58.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCcc---chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEE---KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      ++++++|||+++|||.+++++|+++|+ +|++++|+..   ..+.+.+++...+..         +.++.||++|+++ .
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~---------v~~~~~Dvtd~~~v~  328 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCE---------VVHAACDVAERDALA  328 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCE---------EEEEECCSSCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCE---------EEEEEeCCCCHHHHH
Confidence            478999999999999999999999999 6889999864   345555666544433         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus       329 ~~~~~  333 (511)
T 2z5l_A          329 ALVTA  333 (511)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            88753

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.32  E-value=9.1e-12  Score=77.19  Aligned_cols=69  Identities=20%  Similarity=0.294  Sum_probs=57.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhC-CC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGK-GV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~-g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +. +|+++|||++++||.+++++|++. |+ +|++++|++.+...+...+.  ...         +.++.+|++|+++ .
T Consensus        19 ~~-~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~---------v~~~~~Dl~d~~~l~   86 (344)
T 2gn4_A           19 LD-NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPR---------MRFFIGDVRDLERLN   86 (344)
T ss_dssp             TT-TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTT---------EEEEECCTTCHHHHH
T ss_pred             hC-CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCC---------EEEEECCCCCHHHHH
Confidence            45 899999999999999999999999 97 99999999876665554442  122         8999999999998 8


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus        87 ~~~~   90 (344)
T 2gn4_A           87 YALE   90 (344)
T ss_dssp             HHTT
T ss_pred             HHHh
Confidence            8765

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.32  E-value=7.6e-12  Score=76.55  Aligned_cols=69  Identities=14%  Similarity=0.024  Sum_probs=55.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHh-hhccCCCCCCceEEE-EecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKEN-AKFHSNLGFPSAMFI-RCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~-~~Dv~~~~~-~~~~   82 (85)
                      +++++|||++++||.+++++|+++|++|++++|+....+.+...+.... ..         +.++ .+|++|+++ .+++
T Consensus        11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~~D~~d~~~~~~~~   81 (342)
T 1y1p_A           11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGR---------FETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTT---------EEEEECSCTTSTTTTTTTT
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCc---------eEEEEecCCcChHHHHHHH
Confidence            7899999999999999999999999999999998876655554443221 22         7788 899999887 7665


Q ss_pred             h
Q 034737           83 L   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus        82 ~   82 (342)
T 1y1p_A           82 K   82 (342)
T ss_dssp             T
T ss_pred             c
Confidence            3

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.31  E-value=3.1e-12  Score=75.24  Aligned_cols=58  Identities=47%  Similarity=0.647  Sum_probs=50.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+++ .           ..         +.++.+|++|+++ ++++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~---------~~~~~~D~~~~~~~~~~~~~   60 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------ED---------LIYVEGDVTREEDVRRAVAR   60 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SS---------SEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cc---------eEEEeCCCCCHHHHHHHHHH
Confidence            689999999999999999999999999999999864 1           11         6789999999999 888763

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.30  E-value=9.2e-12  Score=73.25  Aligned_cols=57  Identities=23%  Similarity=0.320  Sum_probs=46.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCce-EEEEecCC
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSA-MFIRCDVT   74 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~Dv~   74 (85)
                      +|. +|+++|||++++||++++++|+++|++|++++|+++..+.+..      ..         + .++.+|++
T Consensus        18 ~l~-~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~---------~~~~~~~Dl~   75 (236)
T 3e8x_A           18 YFQ-GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RG---------ASDIVVANLE   75 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TT---------CSEEEECCTT
T ss_pred             CcC-CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CC---------CceEEEcccH
Confidence            356 8999999999999999999999999999999999887655432      12         7 88999998

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.30  E-value=7.1e-12  Score=74.29  Aligned_cols=60  Identities=27%  Similarity=0.328  Sum_probs=50.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHh-CCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAG-KGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~-~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||+++|||++++++|++ .|+.|++.+++++...                   ..+.++.+|++|+++ +++++
T Consensus         4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~-------------------~~~~~~~~Dv~~~~~v~~~~~   64 (244)
T 4e4y_A            4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-------------------ENLKFIKADLTKQQDITNVLD   64 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC-------------------TTEEEEECCTTCHHHHHHHHH
T ss_pred             CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc-------------------ccceEEecCcCCHHHHHHHHH
Confidence            78999999999999999999999 7889999988764110                   117899999999999 88875


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      .
T Consensus        65 ~   65 (244)
T 4e4y_A           65 I   65 (244)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.30  E-value=6.9e-12  Score=82.85  Aligned_cols=70  Identities=26%  Similarity=0.324  Sum_probs=51.2

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc---------cchHHHHHHHHHHhhhccCCCCCCceEEEEe
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE---------EKGNEVAALVEKENAKFHSNLGFPSAMFIRC   71 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   71 (85)
                      |+|. +|+++|||+++|||+++++.|+++|++|++++++.         +.++.+.+++...+..         +.   +
T Consensus         4 ~~l~-gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~---------~~---~   70 (604)
T 2et6_A            4 VDFK-DKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV---------AV---A   70 (604)
T ss_dssp             CCCT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE---------EE---E
T ss_pred             CCCC-CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe---------EE---E
Confidence            3567 99999999999999999999999999999998765         5566666666544322         33   4


Q ss_pred             cCCCHHH-HHHhh
Q 034737           72 DVTNTKF-ALAFL   83 (85)
Q Consensus        72 Dv~~~~~-~~~~~   83 (85)
                      |++|.++ +++++
T Consensus        71 d~~d~~~~~~~v~   83 (604)
T 2et6_A           71 DYNNVLDGDKIVE   83 (604)
T ss_dssp             ECCCTTCHHHHHH
T ss_pred             EcCCHHHHHHHHH
Confidence            6666655 55543

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.30  E-value=1.9e-12  Score=76.33  Aligned_cols=64  Identities=20%  Similarity=0.120  Sum_probs=53.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .|+++|||++++||++++++|+.+| ++|++++|+++......               ...+.++.+|++|+++ +++++
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~---------------~~~~~~~~~Dl~d~~~~~~~~~   87 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY---------------PTNSQIIMGDVLNHAALKQAMQ   87 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC---------------CTTEEEEECCTTCHHHHHHHHT
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc---------------cCCcEEEEecCCCHHHHHHHhc
Confidence            5789999999999999999999999 89999999976543211               1128899999999999 88876


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      .
T Consensus        88 ~   88 (236)
T 3qvo_A           88 G   88 (236)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.29  E-value=2.5e-12  Score=91.08  Aligned_cols=78  Identities=13%  Similarity=0.108  Sum_probs=60.7

Q ss_pred             CCCCCCcEEEEecCCCh-HHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            1 MELKPGLSAFVTGGASG-IGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~g-ig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      |+|. +|+++|||+++| ||++++++|+++|++|+++ .|+.+.++...+++.....     ..+.++.++.+|++|+++
T Consensus       472 msL~-GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~-----a~Ga~V~vV~~DVTD~es  545 (1688)
T 2pff_A          472 VTFK-DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYG-----AKGSTLIVVPFNQGSKQD  545 (1688)
T ss_dssp             CCCC-SCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTC-----CTTCEEEEEECCSSSTTH
T ss_pred             cccC-CCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhh-----cCCCeEEEEEeCCCCHHH
Confidence            4567 899999999998 9999999999999999988 5776666665555532211     112348999999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       ++++++
T Consensus       546 VeaLVe~  552 (1688)
T 2pff_A          546 VEALIEF  552 (1688)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             988764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.29  E-value=1.5e-11  Score=72.47  Aligned_cols=63  Identities=17%  Similarity=0.156  Sum_probs=52.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      +++++|||++++||++++++|+++  |++|++++|+++..+.+       ...         +.++.+|++|+++ .+++
T Consensus         4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~---------~~~~~~D~~d~~~~~~~~   67 (253)
T 1xq6_A            4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGE---------ADVFIGDITDADSINPAF   67 (253)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCC---------TTEEECCTTSHHHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCC---------eeEEEecCCCHHHHHHHH
Confidence            789999999999999999999999  89999999987543321       122         7789999999999 8877


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      +.
T Consensus        68 ~~   69 (253)
T 1xq6_A           68 QG   69 (253)
T ss_dssp             TT
T ss_pred             cC
Confidence            53

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.29  E-value=1.2e-11  Score=75.71  Aligned_cols=69  Identities=19%  Similarity=0.054  Sum_probs=53.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +++++|||++++||.+++++|+++|++|++++|+......  ..+.....       ...+.++.+|++|+++ .++++
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~   72 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGI-------ENDVKIIHMDLLEFSNIIRTIE   72 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTC-------TTTEEECCCCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccc-------cCceeEEECCCCCHHHHHHHHH
Confidence            7899999999999999999999999999999998764322  11211111       1128899999999998 88765

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.27  E-value=4e-11  Score=73.99  Aligned_cols=71  Identities=21%  Similarity=0.037  Sum_probs=53.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH-----hhhccCCCCCCceEEEEecCCCHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE-----NAKFHSNLGFPSAMFIRCDVTNTK   77 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~   77 (85)
                      +. +++++|||++++||.+++++|+++|++|++++|+..........+...     ...         +.++.+|++|++
T Consensus        25 ~~-~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~d~~   94 (352)
T 1sb8_A           25 AQ-PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN---------FKFIQGDIRNLD   94 (352)
T ss_dssp             HS-CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTT---------EEEEECCTTSHH
T ss_pred             cc-CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCc---------eEEEECCCCCHH
Confidence            45 789999999999999999999999999999999764322212222111     122         889999999999


Q ss_pred             H-HHHhh
Q 034737           78 F-ALAFL   83 (85)
Q Consensus        78 ~-~~~~~   83 (85)
                      + .++++
T Consensus        95 ~~~~~~~  101 (352)
T 1sb8_A           95 DCNNACA  101 (352)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhc
Confidence            8 88765

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.27  E-value=1.5e-11  Score=73.19  Aligned_cols=37  Identities=30%  Similarity=0.473  Sum_probs=35.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +. +|+++|||+++|||++++++|+++|++|++++|++
T Consensus        17 ~~-~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~   53 (249)
T 1o5i_A           17 IR-DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE   53 (249)
T ss_dssp             CT-TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             cC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            56 89999999999999999999999999999999987

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.27  E-value=6.2e-12  Score=77.20  Aligned_cols=68  Identities=26%  Similarity=0.260  Sum_probs=53.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++. +++++|||++++||.+++++|+++|++|++++|+..........+    .         .+.++.+|++|+++ .+
T Consensus        17 ~~~-~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~---------~v~~~~~Dl~d~~~~~~   82 (330)
T 2pzm_A           17 RGS-HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----A---------GLSVIEGSVTDAGLLER   82 (330)
T ss_dssp             TTT-CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----T---------TEEEEECCTTCHHHHHH
T ss_pred             cCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----C---------CceEEEeeCCCHHHHHH
Confidence            355 889999999999999999999999999999999754322111111    1         28899999999998 88


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus        83 ~~~   85 (330)
T 2pzm_A           83 AFD   85 (330)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            775

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.26  E-value=1.4e-11  Score=73.33  Aligned_cols=58  Identities=12%  Similarity=0.147  Sum_probs=47.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                     ...+.+|++|+++ ++++++
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------------------~~~~~~d~~d~~~v~~~~~~   80 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------------------DHSFTIKDSGEEEIKSVIEK   80 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------------------SEEEECSCSSHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------------ccceEEEeCCHHHHHHHHHH
Confidence            789999999999999999999999999999999875321                     1345677787777 776653

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.26  E-value=1.3e-11  Score=76.19  Aligned_cols=69  Identities=20%  Similarity=0.098  Sum_probs=55.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||++++||.+++++|+++|++|++++|+..........+. ...         .+.++.+|++|+++ .++++.
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~---------~~~~~~~Dl~d~~~~~~~~~~   78 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VAD---------GMQSEIGDIRDQNKLLESIRE   78 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTT---------TSEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCC---------ceEEEEccccCHHHHHHHHHh
Confidence            7899999999999999999999999999999998765443333221 112         28899999999998 887653

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.26  E-value=1.5e-12  Score=76.75  Aligned_cols=65  Identities=23%  Similarity=0.235  Sum_probs=52.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |. +|+++|||++++||++++++|+++|+  +|++++|+++..+...      ...         +.++.+|++|+++ .
T Consensus        16 m~-~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~---------~~~~~~D~~d~~~~~   79 (242)
T 2bka_A           16 MQ-NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKN---------VNQEVVDFEKLDDYA   79 (242)
T ss_dssp             HT-CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGG---------CEEEECCGGGGGGGG
T ss_pred             hc-CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCC---------ceEEecCcCCHHHHH
Confidence            45 78999999999999999999999999  9999999876543211      112         7889999999988 7


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus        80 ~~~~   83 (242)
T 2bka_A           80 SAFQ   83 (242)
T ss_dssp             GGGS
T ss_pred             HHhc
Confidence            7664

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.25  E-value=1.5e-11  Score=70.58  Aligned_cols=64  Identities=14%  Similarity=-0.021  Sum_probs=52.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||++++||++++++|+++|++|++++|+++.....      .         ...+.++.+|++|+++ .++++.
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~---------~~~~~~~~~D~~~~~~~~~~~~~   67 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------G---------PRPAHVVVGDVLQAADVDKTVAG   67 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------S---------CCCSEEEESCTTSHHHHHHHHTT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------c---------CCceEEEEecCCCHHHHHHHHcC
Confidence            57899999999999999999999999999999987643211      0         1228899999999999 887653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.24  E-value=1.9e-11  Score=80.82  Aligned_cols=64  Identities=22%  Similarity=0.345  Sum_probs=50.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecC-CCHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDV-TNTK   77 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv-~~~~   77 (85)
                      +|. +|+++|||+++|||+++++.|+++|++|++.++..  .+.+.+++...+..         +..+.+|+ ++.+
T Consensus       319 ~l~-gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~---------~~~~~~Dv~~~~~  383 (604)
T 2et6_A          319 SLK-DKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGE---------AWPDQHDVAKDSE  383 (604)
T ss_dssp             CCT-TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCE---------EEEECCCHHHHHH
T ss_pred             ccC-CCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCe---------EEEEEcChHHHHH
Confidence            466 89999999999999999999999999999988642  45555666544433         77888898 4443

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.24  E-value=7.7e-11  Score=74.47  Aligned_cols=70  Identities=19%  Similarity=0.203  Sum_probs=57.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHH-hCCCEEEEEecCccc------------hHHHHHHHHHHhhhccCCCCCCceEEEEec
Q 034737            6 GLSAFVTGGASGIGRALSLALA-GKGVFVTVVDLSEEK------------GNEVAALVEKENAKFHSNLGFPSAMFIRCD   72 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~-~~g~~v~~~~~~~~~------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~D   72 (85)
                      +|++||||+++|||++++..|+ ..|+.++++++..+.            .....+.+.+.+..         +.++.||
T Consensus        50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~---------a~~i~~D  120 (401)
T 4ggo_A           50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLY---------SVTIDGD  120 (401)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCC---------EEEEESC
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCC---------ceeEeCC
Confidence            6899999999999999999998 679999988775431            23455566666666         8999999


Q ss_pred             CCCHHH-HHHhhh
Q 034737           73 VTNTKF-ALAFLR   84 (85)
Q Consensus        73 v~~~~~-~~~~~~   84 (85)
                      ++++++ ++++++
T Consensus       121 v~d~e~i~~vi~~  133 (401)
T 4ggo_A          121 AFSDEIKAQVIEE  133 (401)
T ss_dssp             TTSHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            999999 998875

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.24  E-value=5.6e-11  Score=73.06  Aligned_cols=69  Identities=25%  Similarity=0.233  Sum_probs=53.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc------hHHHHHHHHHH-hhhccCCCCCCceEEEEecCCCHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK------GNEVAALVEKE-NAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~------~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      +++++|||++++||.+++++|+.+|++|++++|+...      .....+.+... +..         +.++.+|++|+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~---------~~~~~~D~~~~~~   72 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRS---------VEFEEMDILDQGA   72 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCC---------CEEEECCTTCHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCc---------eEEEECCCCCHHH
Confidence            5789999999999999999999999999999886432      22223333321 222         7899999999998


Q ss_pred             -HHHhh
Q 034737           79 -ALAFL   83 (85)
Q Consensus        79 -~~~~~   83 (85)
                       .++++
T Consensus        73 ~~~~~~   78 (348)
T 1ek6_A           73 LQRLFK   78 (348)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence             88775

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.24  E-value=1.4e-11  Score=71.76  Aligned_cols=60  Identities=15%  Similarity=0.154  Sum_probs=50.7

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC-HHH-HHHhhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN-TKF-ALAFLR   84 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~-~~~~~~   84 (85)
                      .++|||++++||++++++|+++|++|++++|+++..+..        ..         +.++.+|++| +++ .++++.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~---------~~~~~~D~~d~~~~~~~~~~~   63 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NN---------VKAVHFDVDWTPEEMAKQLHG   63 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TT---------EEEEECCTTSCHHHHHTTTTT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CC---------ceEEEecccCCHHHHHHHHcC
Confidence            589999999999999999999999999999997654322        22         8999999999 888 777653

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.24  E-value=6.6e-12  Score=77.84  Aligned_cols=77  Identities=21%  Similarity=0.119  Sum_probs=51.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHh--CCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAG--KGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~--~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      +|. +++++|||++++||.+++++|++  .|++|++++|+.................  .......+.++.+|++|+++ 
T Consensus         7 ~~~-~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            7 ELE-NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHF--KNLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             CCT-TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCG--GGGTTCCSEEEECCTTCHHHH
T ss_pred             hcC-CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhh--hhccccCceEEECCCCCHHHH
Confidence            466 89999999999999999999999  9999999999765211110000000000  00112237899999999998 


Q ss_pred             HHH
Q 034737           79 ALA   81 (85)
Q Consensus        79 ~~~   81 (85)
                      +++
T Consensus        84 ~~~   86 (362)
T 3sxp_A           84 RRL   86 (362)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            776

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.22  E-value=4.1e-11  Score=73.32  Aligned_cols=69  Identities=19%  Similarity=0.057  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH-HHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN-EVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      +++.++|||++++||.+++++|+++|++|++++|+..... .....+. ....         +.++.+|++|+++ .+++
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~---------~~~~~~Dl~d~~~~~~~~   82 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGD---------IQYEDGDMADACSVQRAV   82 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGG---------EEEEECCTTCHHHHHHHH
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCc---------eEEEECCCCCHHHHHHHH
Confidence            3789999999999999999999999999999999865421 1111110 1122         8899999999998 8876


Q ss_pred             h
Q 034737           83 L   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus        83 ~   83 (335)
T 1rpn_A           83 I   83 (335)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.20  E-value=3.8e-11  Score=73.05  Aligned_cols=69  Identities=22%  Similarity=0.185  Sum_probs=50.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-Cccc---hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEK---GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+++|||++++||++++++|+++|++|+++.| +++.   .... ..+......         +.++.+|++|+++ .+
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~---------~~~~~~Dl~d~~~~~~   70 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEK---------LHFFNADLSNPDSFAA   70 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHH---------EEECCCCTTCGGGGHH
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCc---------eEEEecCCCCHHHHHH
Confidence            578999999999999999999999999999888 5432   2211 111111122         7889999999998 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus        71 ~~~~   74 (322)
T 2p4h_X           71 AIEG   74 (322)
T ss_dssp             HHTT
T ss_pred             HHcC
Confidence            7753

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.20  E-value=2.3e-11  Score=72.53  Aligned_cols=46  Identities=26%  Similarity=0.180  Sum_probs=40.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      |+++|||+++|||++++++|+++|++|++++|+.+..+...+ +...
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~   47 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET   47 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc
Confidence            589999999999999999999999999999999887776654 5443

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.20  E-value=4.4e-11  Score=68.93  Aligned_cols=61  Identities=21%  Similarity=0.253  Sum_probs=50.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      |+++|||+++|||++++++|+++  +|++++|+++..+...+++.              ..++.+|++|+++ +++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~--------------~~~~~~D~~~~~~~~~~~~   62 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG--------------ARALPADLADELEAKALLE   62 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT--------------CEECCCCTTSHHHHHHHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc--------------CcEEEeeCCCHHHHHHHHH
Confidence            57999999999999999999998  99999998866655544331              1678899999999 88775

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.20  E-value=1.2e-10  Score=77.63  Aligned_cols=72  Identities=25%  Similarity=0.229  Sum_probs=54.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH-hhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE-NAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      .+. +++++|||++++||.+++++|+++|++|++++|+..........+... ...         +.++.+|++++++ .
T Consensus         8 ~~~-~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~---------v~~v~~Dl~d~~~l~   77 (699)
T 1z45_A            8 EST-SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHH---------IPFYEVDLCDRKGLE   77 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSC---------CCEEECCTTCHHHHH
T ss_pred             ccC-CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCc---------eEEEEcCCCCHHHHH
Confidence            345 789999999999999999999999999999998765433322233221 222         7889999999999 8


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus        78 ~~~~   81 (699)
T 1z45_A           78 KVFK   81 (699)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8775

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.19  E-value=2.2e-10  Score=70.21  Aligned_cols=68  Identities=16%  Similarity=0.218  Sum_probs=51.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++++|||++++||++++++|+++|++|++++|+. .........+.. ...         +.++.+|++|+++ .++++.
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~---------~~~~~~Dl~d~~~~~~~~~~   71 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGN---------FEFVHGDIRNKNDVTRLITK   71 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCC---------CEEEECCTTCHHHHHHHHHH
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCc---------eEEEEcCCCCHHHHHHHHhc
Confidence            4799999999999999999999999999999864 222222333322 122         7899999999999 887754

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.19  E-value=5.3e-11  Score=73.20  Aligned_cols=57  Identities=25%  Similarity=0.260  Sum_probs=49.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|+++|||++++||.+++++|+++|++|++++|++..            ..         +.++.+|++|+++ .++++
T Consensus        19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~---------~~~~~~Dl~d~~~~~~~~~   76 (347)
T 4id9_A           19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TG---------GEEVVGSLEDGQALSDAIM   76 (347)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SC---------CSEEESCTTCHHHHHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CC---------ccEEecCcCCHHHHHHHHh
Confidence            7899999999999999999999999999999998754            22         7889999999998 87764

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.19  E-value=3.5e-11  Score=70.21  Aligned_cols=62  Identities=21%  Similarity=0.111  Sum_probs=52.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +.++|||++++||++++++|+++|++|++++|+++.....       ..         .+.++.+|++|+++ .++++.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~---------~~~~~~~Dl~d~~~~~~~~~~   67 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------NE---------HLKVKKADVSSLDEVCEVCKG   67 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------CT---------TEEEECCCTTCHHHHHHHHTT
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------cC---------ceEEEEecCCCHHHHHHHhcC
Confidence            6899999999999999999999999999999997654321       01         28999999999999 887753

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.18  E-value=9.3e-11  Score=71.90  Aligned_cols=68  Identities=21%  Similarity=0.203  Sum_probs=51.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH--HHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA--ALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      ++.++|||++++||.+++++|+++|++|+++.|+.+......  ..+. ....         +.++.+|++|+++ .+++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~---------~~~~~~Dl~d~~~~~~~~   78 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGD---------LKIFRADLTDELSFEAPI   78 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSC---------EEEEECCTTTSSSSHHHH
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCc---------EEEEecCCCChHHHHHHH
Confidence            578999999999999999999999999998888765432211  1121 1122         7889999999888 7776


Q ss_pred             h
Q 034737           83 L   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus        79 ~   79 (338)
T 2rh8_A           79 A   79 (338)
T ss_dssp             T
T ss_pred             c
Confidence            4

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.17  E-value=3.8e-11  Score=73.77  Aligned_cols=66  Identities=18%  Similarity=0.174  Sum_probs=51.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++++|||++++||.+++++|+++|++|++++|+..........+             +.+.++.+|++|+++ .++++.
T Consensus        21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~-------------~~~~~~~~Dl~d~~~~~~~~~~   87 (333)
T 2q1w_A           21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH-------------PNLTFVEGSIADHALVNQLIGD   87 (333)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC-------------TTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc-------------CCceEEEEeCCCHHHHHHHHhc
Confidence            789999999999999999999999999999999764321100000             128899999999998 887653

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.17  E-value=2e-10  Score=70.04  Aligned_cols=67  Identities=10%  Similarity=0.122  Sum_probs=52.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++++|||++++||.+++++|++.|++|++++|+..........+.  ...         +.++.+|++|+++ .++++.
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~--~~~---------v~~v~~Dl~d~~~l~~a~~~   79 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ--SLG---------AIIVKGELDEHEKLVELMKK   79 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHH--HTT---------CEEEECCTTCHHHHHHHHTT
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhh--cCC---------CEEEEecCCCHHHHHHHHcC
Confidence            479999999999999999999999999999998752222222222  122         7899999999999 887753

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.17  E-value=9.3e-11  Score=72.64  Aligned_cols=72  Identities=19%  Similarity=0.097  Sum_probs=47.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH-HHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN-EVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      |+++|||++++||.+++++|+.+|++|++++|+..... .....+.....     .....+.++.+|++|+++ .++++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~   75 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPH-----TCNPKFHLHYGDLSDTSNLTRILR   75 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--------------------------CCEEECCCCSSCHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccc-----cCCCceEEEECCCCCHHHHHHHHH
Confidence            68999999999999999999999999999999865321 11111111000     001228899999999998 88765

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.16  E-value=2.9e-10  Score=70.11  Aligned_cols=69  Identities=10%  Similarity=0.089  Sum_probs=52.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHH-HhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK-ENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++++|||++|+||+++++.|++.|++|++++|+..........+.. ....         +.++.+|++|+++ .++++
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~---------v~~~~~Dl~d~~~l~~~~~   80 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKG---------AIIVYGLINEQEAMEKILK   80 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTT---------CEEEECCTTCHHHHHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCC---------cEEEEeecCCHHHHHHHHh
Confidence            46899999999999999999999999999999987322221121211 1223         8999999999999 88876

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.16  E-value=3.3e-10  Score=68.55  Aligned_cols=66  Identities=21%  Similarity=0.209  Sum_probs=53.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++++|||++++||++++++|+++| ++|++++|+++....  ..+..  ..         +.++.+|++|+++ .++++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~~---------~~~~~~D~~d~~~l~~~~~   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--QG---------AEVVQGDQDDQVIMELALN   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--TT---------CEEEECCTTCHHHHHHHHT
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--CC---------CEEEEecCCCHHHHHHHHh
Confidence            5789999999999999999999998 999999998765422  12221  22         7889999999999 88765


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      .
T Consensus        72 ~   72 (299)
T 2wm3_A           72 G   72 (299)
T ss_dssp             T
T ss_pred             c
Confidence            3

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.16  E-value=3.3e-10  Score=70.86  Aligned_cols=70  Identities=23%  Similarity=0.217  Sum_probs=51.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH----------------HHHHHHH-HhhhccCCCCCCceEE
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE----------------VAALVEK-ENAKFHSNLGFPSAMF   68 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~----------------~~~~l~~-~~~~~~~~~~~~~~~~   68 (85)
                      ++.++|||++|+||.+++++|+++|++|++++|.......                ....+.. ....         +.+
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---------v~~   81 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKS---------IEL   81 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCC---------CEE
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCc---------eEE
Confidence            6789999999999999999999999999999986532111                1111111 1122         889


Q ss_pred             EEecCCCHHH-HHHhhh
Q 034737           69 IRCDVTNTKF-ALAFLR   84 (85)
Q Consensus        69 ~~~Dv~~~~~-~~~~~~   84 (85)
                      +.+|++|+++ .++++.
T Consensus        82 ~~~Dl~d~~~~~~~~~~   98 (404)
T 1i24_A           82 YVGDICDFEFLAESFKS   98 (404)
T ss_dssp             EESCTTSHHHHHHHHHH
T ss_pred             EECCCCCHHHHHHHHhc
Confidence            9999999998 887654

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.16  E-value=8.9e-11  Score=73.11  Aligned_cols=69  Identities=20%  Similarity=0.055  Sum_probs=50.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-----hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-----GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++++|||++++||.+++++|+.+|++|++++|+...     ++.....+...+.        ..+.++.+|++|+++ .+
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~Dl~d~~~~~~  100 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNK--------ALMKLHYADLTDASSLRR  100 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------------CCEEEEECCTTCHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccc--------cceEEEECCCCCHHHHHH
Confidence            589999999999999999999999999999997653     2222111111111        028899999999998 87


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus       101 ~~~  103 (381)
T 1n7h_A          101 WID  103 (381)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            765

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.15  E-value=2e-10  Score=69.54  Aligned_cols=67  Identities=13%  Similarity=0.152  Sum_probs=52.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-------cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-------EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      +++++|||++++||.+++++|++.|++|++++|+.       ++.+.+ ..+.  ...         +.++.+|++|+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~--~~~---------v~~v~~D~~d~~~   69 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQ--SLG---------VILLEGDINDHET   69 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHH--HTT---------CEEEECCTTCHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHH--hCC---------CEEEEeCCCCHHH
Confidence            46799999999999999999999999999999986       222222 1221  122         7899999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       .++++.
T Consensus        70 l~~~~~~   76 (307)
T 2gas_A           70 LVKAIKQ   76 (307)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHhC
Confidence             887753

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.15  E-value=1.3e-10  Score=85.64  Aligned_cols=71  Identities=15%  Similarity=0.181  Sum_probs=56.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCccchH---HHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEEKGN---EVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      ++|+++|||+++|||+++++.|+++|++ |++++|+....+   ...+++...+..         +.++.+|++|.++ +
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~---------v~~~~~Dvsd~~~v~ 1953 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQ---------VLVSTSNASSLDGAR 1953 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCE---------EEEECCCSSSHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCE---------EEEEecCCCCHHHHH
Confidence            4899999999999999999999999997 788888875543   334444433333         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus      1954 ~~~~~ 1958 (2512)
T 2vz8_A         1954 SLITE 1958 (2512)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.15  E-value=3.4e-10  Score=70.41  Aligned_cols=71  Identities=15%  Similarity=0.081  Sum_probs=54.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEec-CCCHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCD-VTNTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~D-v~~~~~-   78 (85)
                      |++. +++++|||++++||++++++|+.+|++|++++|+++....  ..+.. ...         +.++.+| ++|+++ 
T Consensus         1 M~~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l~~-~~~---------v~~v~~D~l~d~~~l   67 (352)
T 1xgk_A            1 MAQQ-KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA-IPN---------VTLFQGPLLNNVPLM   67 (352)
T ss_dssp             --CC-CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT-STT---------EEEEESCCTTCHHHH
T ss_pred             CCCC-CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHHhh-cCC---------cEEEECCccCCHHHH
Confidence            5555 6789999999999999999999999999999998765421  12221 112         7889999 999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      .++++.
T Consensus        68 ~~~~~~   73 (352)
T 1xgk_A           68 DTLFEG   73 (352)
T ss_dssp             HHHHTT
T ss_pred             HHHHhc
Confidence            887753

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.14  E-value=3.5e-10  Score=69.34  Aligned_cols=67  Identities=22%  Similarity=0.328  Sum_probs=49.8

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH-hhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE-NAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++|||++++||++++++|+++|++|+++++...........+... +..         +.++.+|++|+++ .++++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~~~   70 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKH---------PTFVEGDIRNEALMTEILH   70 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSC---------CEEEECCTTCHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCc---------ceEEEccCCCHHHHHHHhh
Confidence            6899999999999999999999999999887543211222222221 222         7889999999998 87765

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.13  E-value=8.6e-11  Score=72.93  Aligned_cols=66  Identities=18%  Similarity=0.265  Sum_probs=52.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCC-CHHH-H
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVT-NTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~-~   79 (85)
                      |. +++++|||++++||.+++++|+++ |++|++++|+.+.......     ...         +.++.+|++ |.+. .
T Consensus        22 m~-~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~---------v~~~~~Dl~~d~~~~~   86 (372)
T 3slg_A           22 MK-AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HER---------MHFFEGDITINKEWVE   86 (372)
T ss_dssp             -C-CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STT---------EEEEECCTTTCHHHHH
T ss_pred             cC-CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCC---------eEEEeCccCCCHHHHH
Confidence            44 679999999999999999999998 9999999998765433211     122         899999999 8888 7


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus        87 ~~~~   90 (372)
T 3slg_A           87 YHVK   90 (372)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            7764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.13  E-value=4.4e-10  Score=68.55  Aligned_cols=68  Identities=9%  Similarity=0.026  Sum_probs=51.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cc----hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EK----GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      .+.++|||++++||.+++++|+++|++|++++|+. ..    .......+.  ...         +.++.+|++|+++ .
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~--~~~---------v~~v~~D~~d~~~l~   72 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR--SMG---------VTIIEGEMEEHEKMV   72 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH--HTT---------CEEEECCTTCHHHHH
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh--cCC---------cEEEEecCCCHHHHH
Confidence            45799999999999999999999999999999986 21    111111121  222         8899999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        73 ~a~~~   77 (321)
T 3c1o_A           73 SVLKQ   77 (321)
T ss_dssp             HHHTT
T ss_pred             HHHcC
Confidence            87753

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.12  E-value=2e-10  Score=71.68  Aligned_cols=63  Identities=16%  Similarity=0.107  Sum_probs=51.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +++++|||++++||.+++++|+++|++|++++|+.......      ....         +.++.+|++|+++ .++++
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~---------v~~~~~Dl~d~~~~~~~~~   92 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFC---------DEFHLVDLRVMENCLKVTE   92 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTC---------SEEEECCTTSHHHHHHHHT
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCC---------ceEEECCCCCHHHHHHHhC
Confidence            57899999999999999999999999999999986542211      0112         7889999999998 87764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.12  E-value=2e-10  Score=69.88  Aligned_cols=59  Identities=20%  Similarity=0.208  Sum_probs=50.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++++|||++++||.+++++|+++|++|++++|+... +.    +     .         +.++.+|++|+++ .++++
T Consensus        12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~---------~~~~~~Dl~d~~~~~~~~~   71 (321)
T 2pk3_A           12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----N---------VEMISLDIMDSQRVKKVIS   71 (321)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----T---------EEEEECCTTCHHHHHHHHH
T ss_pred             cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----e---------eeEEECCCCCHHHHHHHHH
Confidence            5789999999999999999999999999999998754 11    1     2         8889999999998 88765

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.12  E-value=7.4e-11  Score=72.44  Aligned_cols=65  Identities=17%  Similarity=0.180  Sum_probs=52.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCC-------CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKG-------VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g-------~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      |. +++++|||++++||.+++++|+++|       ++|++++|+......      ..         ...+.++.+|++|
T Consensus        12 ~~-~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~---------~~~~~~~~~Dl~d   75 (342)
T 2hrz_A           12 FQ-GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GF---------SGAVDARAADLSA   75 (342)
T ss_dssp             CS-CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TC---------CSEEEEEECCTTS
T ss_pred             cc-CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------cc---------CCceeEEEcCCCC
Confidence            56 8899999999999999999999999       799999997643221      01         1238899999999


Q ss_pred             HHH-HHHhh
Q 034737           76 TKF-ALAFL   83 (85)
Q Consensus        76 ~~~-~~~~~   83 (85)
                      +++ .++++
T Consensus        76 ~~~~~~~~~   84 (342)
T 2hrz_A           76 PGEAEKLVE   84 (342)
T ss_dssp             TTHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            998 87763

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.11  E-value=1.3e-10  Score=67.27  Aligned_cols=55  Identities=13%  Similarity=0.131  Sum_probs=46.1

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      .++|||++++||++++++|+++|++|++++|++++.....       ..         +.++.+|++|+++
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~---------~~~~~~D~~d~~~   56 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KD---------INILQKDIFDLTL   56 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SS---------SEEEECCGGGCCH
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CC---------CeEEeccccChhh
Confidence            5899999999999999999999999999999986544321       22         8899999998753

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.11  E-value=3e-10  Score=65.32  Aligned_cols=34  Identities=18%  Similarity=0.221  Sum_probs=31.4

Q ss_pred             Cc-EEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GL-SAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~-~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +| .++|||++++||++++++|+ +|++|++++|+.
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~   36 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHS   36 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSS
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCc
Confidence            44 79999999999999999999 999999999875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.10  E-value=3.4e-10  Score=69.36  Aligned_cols=62  Identities=11%  Similarity=0.080  Sum_probs=51.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++++|||++++||.+++++|+.+|++|++++|++...+.+.      ...         +.++.+|++|+++ .++++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~---------~~~~~~Dl~d~~~~~~~~~   76 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA------YLE---------PECRVAEMLDHAGLERALR   76 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG------GGC---------CEEEECCTTCHHHHHHHTT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc------cCC---------eEEEEecCCCHHHHHHHHc
Confidence            47999999999999999999999999999999876543211      112         7899999999998 88765

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.10  E-value=7.9e-10  Score=66.95  Aligned_cols=70  Identities=17%  Similarity=0.153  Sum_probs=52.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch--HHHHHHHHH-HhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG--NEVAALVEK-ENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~--~~~~~~l~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      .+.++|||++++||.++++.|++.|++|++++|+....  ......+.. ....         +.++.+|++|+++ .++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~---------v~~v~~D~~d~~~l~~~   74 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASG---------ANIVHGSIDDHASLVEA   74 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTT---------CEEECCCTTCHHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCC---------CEEEEeccCCHHHHHHH
Confidence            35799999999999999999999999999999986432  111112211 1222         8899999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      ++.
T Consensus        75 ~~~   77 (308)
T 1qyc_A           75 VKN   77 (308)
T ss_dssp             HHT
T ss_pred             HcC
Confidence            653

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.08  E-value=7.3e-11  Score=72.58  Aligned_cols=71  Identities=18%  Similarity=0.229  Sum_probs=50.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCcc--chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEE--KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTK   77 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~   77 (85)
                      ++. +++++|||++++||.+++++|+.+|  +.|++.++...  ....+    ...       ...+.+.++.+|++|++
T Consensus        21 ~~~-~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l----~~~-------~~~~~~~~~~~Dl~d~~   88 (346)
T 4egb_A           21 QSN-AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNV----KSI-------QDHPNYYFVKGEIQNGE   88 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGG----TTT-------TTCTTEEEEECCTTCHH
T ss_pred             ccC-CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhh----hhh-------ccCCCeEEEEcCCCCHH
Confidence            355 7899999999999999999999999  67888877642  11111    100       01123899999999999


Q ss_pred             H-HHHhhh
Q 034737           78 F-ALAFLR   84 (85)
Q Consensus        78 ~-~~~~~~   84 (85)
                      + .++++.
T Consensus        89 ~~~~~~~~   96 (346)
T 4egb_A           89 LLEHVIKE   96 (346)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhh
Confidence            9 887753

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.08  E-value=3.3e-10  Score=68.01  Aligned_cols=63  Identities=21%  Similarity=0.180  Sum_probs=51.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      |.++|||++++||++++++|+++  |++|++++|+++..+.+..      ..         +.++.+|++|+++ .++++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~------~~---------~~~~~~D~~d~~~l~~~~~   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD------QG---------VEVRHGDYNQPESLQKAFA   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH------TT---------CEEEECCTTCHHHHHHHTT
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh------cC---------CeEEEeccCCHHHHHHHHh
Confidence            36899999999999999999998  9999999998766543321      22         7889999999999 88765


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      .
T Consensus        66 ~   66 (287)
T 2jl1_A           66 G   66 (287)
T ss_dssp             T
T ss_pred             c
Confidence            3

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.08  E-value=1.1e-09  Score=66.48  Aligned_cols=70  Identities=16%  Similarity=0.132  Sum_probs=52.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch-HHHHHHHHH-HhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG-NEVAALVEK-ENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~-~~~~~~l~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      .+.++|||++++||.+++++|+++|++|++++|+.... ....+.+.. ....         +.++.+|++|+++ .+++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~d~~~l~~~~   74 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLG---------AKLIEASLDDHQRLVDAL   74 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTT---------CEEECCCSSCHHHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCC---------eEEEeCCCCCHHHHHHHH
Confidence            35799999999999999999999999999999985321 111111111 1222         7899999999999 8876


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      +.
T Consensus        75 ~~   76 (313)
T 1qyd_A           75 KQ   76 (313)
T ss_dssp             TT
T ss_pred             hC
Confidence            53

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.08  E-value=3.6e-10  Score=70.26  Aligned_cols=68  Identities=16%  Similarity=0.025  Sum_probs=49.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-----hHHHHHHHHH-HhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-----GNEVAALVEK-ENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-----~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      ++++|||++++||.+++++|+++|++|++++|+...     ++.+...+.. ..         ..+.++.+|++|+++ .
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~---------~~~~~~~~Dl~d~~~~~   95 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE---------GNMKLHYGDLTDSTCLV   95 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC------------------CEEEEECCTTCHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccC---------CCceEEEccCCCHHHHH
Confidence            589999999999999999999999999999987643     1111111100 11         128899999999998 8


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus        96 ~~~~   99 (375)
T 1t2a_A           96 KIIN   99 (375)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8765

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.08  E-value=4.1e-11  Score=71.19  Aligned_cols=36  Identities=25%  Similarity=0.411  Sum_probs=33.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      |+++|||+++|||++++++|+++|++|++++|+++.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~   37 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE   37 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            589999999999999999999999999999998754

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.08  E-value=1.2e-10  Score=67.73  Aligned_cols=56  Identities=16%  Similarity=0.067  Sum_probs=46.0

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      .++|||++++||++++++|+++|++|++++|+++....+.      ...         +.++.+|++|+++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~---------~~~~~~D~~d~~~   57 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------GAT---------VATLVKEPLVLTE   57 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------CTT---------SEEEECCGGGCCH
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------CCC---------ceEEecccccccH
Confidence            5999999999999999999999999999999976544321      112         8899999998753

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.06  E-value=2.5e-09  Score=66.78  Aligned_cols=77  Identities=25%  Similarity=0.229  Sum_probs=53.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHH-hCCCEEEEEecCccc---------hHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            6 GLSAFVTGGASGIGRALSLALA-GKGVFVTVVDLSEEK---------GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~-~~g~~v~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      +++++|||++++||.+++++|+ .+|++|++++|+...         .+.+...+....... +.....++.++.+|++|
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d   80 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK-PPWADRYAALEVGDVRN   80 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSC-CTTTTCCCEEEESCTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccc-cccCCceEEEEECCCCC
Confidence            5689999999999999999999 999999999987644         333332222211000 00001127889999999


Q ss_pred             HHH-HHHhh
Q 034737           76 TKF-ALAFL   83 (85)
Q Consensus        76 ~~~-~~~~~   83 (85)
                      +++ .++++
T Consensus        81 ~~~~~~~~~   89 (397)
T 1gy8_A           81 EDFLNGVFT   89 (397)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999 88775

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.06  E-value=1.5e-10  Score=72.20  Aligned_cols=67  Identities=27%  Similarity=0.262  Sum_probs=52.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +. +++++|||++++||.+++++|+++| ++|++++|+.......   +. .         .+.+.++.+|++|+++ .+
T Consensus        30 ~~-~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~-~---------~~~v~~~~~Dl~d~~~l~~   95 (377)
T 2q1s_A           30 LA-NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP-D---------HPAVRFSETSITDDALLAS   95 (377)
T ss_dssp             GT-TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC-C---------CTTEEEECSCTTCHHHHHH
T ss_pred             hC-CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc-C---------CCceEEEECCCCCHHHHHH
Confidence            44 7899999999999999999999999 9999999976432110   00 0         1228899999999998 77


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus        96 ~~~   98 (377)
T 2q1s_A           96 LQD   98 (377)
T ss_dssp             CCS
T ss_pred             Hhh
Confidence            654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.04  E-value=6.2e-10  Score=70.45  Aligned_cols=73  Identities=12%  Similarity=0.009  Sum_probs=48.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc---chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE---KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      +++++|||++++||.+++++|+..|++|++++|++.   ..+.+.+.+..............++.++.+|++++++
T Consensus        69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            679999999999999999999999999999999887   3444444443221000000001128999999998654

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.04  E-value=3.4e-10  Score=69.42  Aligned_cols=38  Identities=34%  Similarity=0.505  Sum_probs=34.6

Q ss_pred             CCCCCCcEEEEecC--CChHHHHHHHHHHhCCCEEEEEecC
Q 034737            1 MELKPGLSAFVTGG--ASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         1 ~~l~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      |+|. +|+++|||+  ++|||++++++|+++|++|++++|+
T Consensus         5 ~~l~-~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            5 VDLR-GKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             CCCT-TCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             cccC-CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            4467 899999999  8999999999999999999999865

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.03  E-value=5.1e-10  Score=67.36  Aligned_cols=62  Identities=16%  Similarity=0.077  Sum_probs=50.9

Q ss_pred             EEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            8 SAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      .++|||++++||++++++|... |++|+++.|++++...+.      ...         +.++.+|++|+++ .++++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~------~~~---------v~~~~~D~~d~~~l~~~~~~   65 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW------RGK---------VSVRQLDYFNQESMVEAFKG   65 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG------BTT---------BEEEECCTTCHHHHHHHTTT
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh------hCC---------CEEEEcCCCCHHHHHHHHhC
Confidence            5899999999999999999998 999999999986543221      112         8999999999999 887753

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.02  E-value=2.7e-09  Score=68.70  Aligned_cols=38  Identities=21%  Similarity=0.210  Sum_probs=35.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC---CCEEEEEecCccch
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK---GVFVTVVDLSEEKG   43 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~---g~~v~~~~~~~~~~   43 (85)
                      +++++|||++++||.+++++|++.   |++|++++|+....
T Consensus        73 ~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~  113 (478)
T 4dqv_A           73 LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE  113 (478)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH
Confidence            789999999999999999999998   89999999987643

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.01  E-value=6.7e-10  Score=68.49  Aligned_cols=35  Identities=17%  Similarity=0.219  Sum_probs=32.2

Q ss_pred             CcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +|+++|||+++  |||++++++|+++|++|++.++++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            78999999875  999999999999999999888765

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.01  E-value=2.2e-09  Score=65.29  Aligned_cols=59  Identities=17%  Similarity=0.140  Sum_probs=47.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++++|||++++||.+++++|+++|++|++++|++.... ..        .         +.++.+|++ +++ .++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--------~---------~~~~~~Dl~-~~~~~~~~~   61 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--------D---------YEYRVSDYT-LEDLINQLN   61 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------C---------CEEEECCCC-HHHHHHHTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--------c---------eEEEEcccc-HHHHHHhhc
Confidence            468999999999999999999999999999999844322 11        2         889999999 888 77765

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.01  E-value=6.4e-11  Score=68.46  Aligned_cols=58  Identities=10%  Similarity=-0.038  Sum_probs=45.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      |.+. +++++|||++++||++++++|+++|+  +|++++|++..          ....         +.++.+|++++++
T Consensus         1 M~~~-~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~---------~~~~~~D~~~~~~   60 (215)
T 2a35_A            1 MHST-PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPR---------LDNPVGPLAELLP   60 (215)
T ss_dssp             ---C-CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTT---------EECCBSCHHHHGG
T ss_pred             CCCC-CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCC---------ceEEeccccCHHH
Confidence            4445 78999999999999999999999998  99999998764          0112         6777788877665

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.01  E-value=7.2e-10  Score=66.44  Aligned_cols=61  Identities=15%  Similarity=0.148  Sum_probs=50.7

Q ss_pred             EEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            9 AFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++|||++++||.+++++|+++  |++|++++|+++..+.+..      ..         +.++.+|++|+++ .++++.
T Consensus         2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~------~~---------~~~~~~D~~d~~~~~~~~~~   65 (286)
T 2zcu_A            2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA------QG---------ITVRQADYGDEAALTSALQG   65 (286)
T ss_dssp             EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH------TT---------CEEEECCTTCHHHHHHHTTT
T ss_pred             EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc------CC---------CeEEEcCCCCHHHHHHHHhC
Confidence            799999999999999999998  9999999998766543321      22         7889999999999 887653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=98.99  E-value=7.7e-10  Score=67.03  Aligned_cols=61  Identities=15%  Similarity=0.120  Sum_probs=50.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      ++.++|||++++||.+++++|+++  |++|++++|+....+     +.   ..         +.++.+|++|+++ .+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~---~~---------~~~~~~D~~d~~~~~~~~   64 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV---NS---------GPFEVVNALDFNQIEHLV   64 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH---HS---------SCEEECCTTCHHHHHHHH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc---CC---------CceEEecCCCHHHHHHHH
Confidence            467999999999999999999998  899999999876522     11   12         6789999999998 8877


Q ss_pred             h
Q 034737           83 L   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus        65 ~   65 (312)
T 2yy7_A           65 E   65 (312)
T ss_dssp             H
T ss_pred             h
Confidence            5

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=98.98  E-value=7.4e-10  Score=67.27  Aligned_cols=61  Identities=31%  Similarity=0.361  Sum_probs=47.6

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++|||++++||++++++|+++|++|++++|.......   .+   ...         +.++.+|++|+++ .++++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~---~~~---------~~~~~~Dl~~~~~~~~~~~   63 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV---PKG---------VPFFRVDLRDKEGVERAFR   63 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS---CTT---------CCEECCCTTCHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc---ccC---------eEEEECCCCCHHHHHHHHH
Confidence            58999999999999999999999999999885432110   00   012         7788999999998 87765

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=98.97  E-value=6.2e-10  Score=68.13  Aligned_cols=67  Identities=21%  Similarity=0.199  Sum_probs=49.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCcc--chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEE--KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      ++.++|||++++||.+++++|+++|  ++|++++|+..  ..+.+ ..+.          ....+.++.+|++|+++ .+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~----------~~~~~~~~~~Dl~d~~~~~~   71 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE----------DDPRYTFVKGDVADYELVKE   71 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT----------TCTTEEEEECCTTCHHHHHH
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc----------cCCceEEEEcCCCCHHHHHH
Confidence            5689999999999999999999986  89999998642  12111 1110          01238899999999998 77


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      ++.
T Consensus        72 ~~~   74 (336)
T 2hun_A           72 LVR   74 (336)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            753

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=98.97  E-value=1.9e-09  Score=65.78  Aligned_cols=62  Identities=27%  Similarity=0.357  Sum_probs=49.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +.++|||++++||.+++++|+++|++|++++|+......   .+.   ..         +.++.+|++|+++ .++++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~---~~---------~~~~~~D~~~~~~~~~~~~   64 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED---AIT---EG---------AKFYNGDLRDKAFLRDVFT   64 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSC---TT---------SEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh---hcC---CC---------cEEEECCCCCHHHHHHHHh
Confidence            479999999999999999999999999999987643221   110   12         7889999999998 87765

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.97  E-value=6.7e-10  Score=65.80  Aligned_cols=45  Identities=20%  Similarity=0.076  Sum_probs=38.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEE-e--cCccchHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVV-D--LSEEKGNEVAALV   50 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~--~~~~~~~~~~~~l   50 (85)
                      +|+++|||+++|||++++++|+++|++|+++ +  |+++.++...+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~   48 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN   48 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh
Confidence            4799999999999999999999999999999 5  9887666655444

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.95  E-value=8e-10  Score=68.19  Aligned_cols=63  Identities=17%  Similarity=0.180  Sum_probs=51.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC-----CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG-----VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g-----~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      ++.++|||++++||.+++++|+++|     ++|++++|+.....     +  ..         ..+.++.+|++|+++ .
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~--~~---------~~~~~~~~Dl~d~~~~~   64 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H--ED---------NPINYVQCDISDPDDSQ   64 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C--CS---------SCCEEEECCTTSHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c--cc---------CceEEEEeecCCHHHHH
Confidence            4689999999999999999999999     99999999875432     0  11         127899999999998 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      ++++.
T Consensus        65 ~~~~~   69 (364)
T 2v6g_A           65 AKLSP   69 (364)
T ss_dssp             HHHTT
T ss_pred             HHHhc
Confidence            87654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.95  E-value=8.9e-09  Score=54.31  Aligned_cols=62  Identities=19%  Similarity=0.113  Sum_probs=50.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++.++|+|+ +++|..+++.|...| ++|++++|++++.+...      ...         +.++.+|+.+.+. .+++.
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~------~~~---------~~~~~~d~~~~~~~~~~~~   68 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN------RMG---------VATKQVDAKDEAGLAKALG   68 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH------TTT---------CEEEECCTTCHHHHHHHTT
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH------hCC---------CcEEEecCCCHHHHHHHHc
Confidence            578999999 999999999999999 89999999987655443      122         6788999999888 77654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=98.95  E-value=3e-10  Score=67.81  Aligned_cols=60  Identities=23%  Similarity=0.319  Sum_probs=49.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      |+++|||++++||++++++|+.+|++|++++|++.....         ..         +.++.+|++|+++ .++++.
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~~---------~~~~~~Dl~d~~~~~~~~~~   63 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE---------AH---------EEIVACDLADAQAVHDLVKD   63 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCC---------TT---------EEECCCCTTCHHHHHHHHTT
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccC---------CC---------ccEEEccCCCHHHHHHHHcC
Confidence            579999999999999999999999999999998753110         12         7889999999998 877653

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=98.94  E-value=1.5e-09  Score=66.44  Aligned_cols=63  Identities=16%  Similarity=0.225  Sum_probs=48.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH-HH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT-KF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~-~~~~~   83 (85)
                      +.++|||++++||.+++++|+++ |++|++++|+....+...     ..         ..+.++.+|++|. +. +++++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~---------~~~~~~~~D~~~~~~~~~~~~~   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NH---------PHFHFVEGDISIHSEWIEYHVK   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TC---------TTEEEEECCTTTCSHHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cC---------CCeEEEeccccCcHHHHHhhcc
Confidence            46999999999999999999998 899999999876543211     01         1288999999984 45 55543

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=98.92  E-value=1.4e-09  Score=65.42  Aligned_cols=58  Identities=22%  Similarity=0.173  Sum_probs=48.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++.++||| +|+||.+++++|+++|++|++++|+.+...          ..         +.++.+|++|+++ .++++
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~---------~~~~~~Dl~d~~~~~~~~~   61 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP----------AG---------VQTLIADVTRPDTLASIVH   61 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC----------TT---------CCEEECCTTCGGGCTTGGG
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc----------cC---------CceEEccCCChHHHHHhhc
Confidence            56799999 599999999999999999999999876521          22         8899999999988 77654

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=98.92  E-value=1.3e-09  Score=66.98  Aligned_cols=66  Identities=20%  Similarity=0.198  Sum_probs=50.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHhC--CCEEEEEecCccc--hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEK--GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      ++++|||++++||.+++++|+.+  |++|++++|+...  .+.+ ..+.           .+.+.++.+|++|+++ .++
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~-----------~~~~~~~~~Dl~d~~~~~~~   72 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAIL-----------GDRVELVVGDIADAELVDKL   72 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGC-----------SSSEEEEECCTTCHHHHHHH
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHH-hhhc-----------cCCeEEEECCCCCHHHHHHH
Confidence            58999999999999999999998  8999999986521  1111 0110           1238899999999999 887


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      ++.
T Consensus        73 ~~~   75 (348)
T 1oc2_A           73 AAK   75 (348)
T ss_dssp             HTT
T ss_pred             hhc
Confidence            754

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=98.91  E-value=2.5e-09  Score=64.98  Aligned_cols=36  Identities=17%  Similarity=0.225  Sum_probs=30.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      +++++|||++++||.+++++|+++|++|++++|+..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   37 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRA   37 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCC
Confidence            578999999999999999999999999999998653

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=98.90  E-value=2.8e-09  Score=64.66  Aligned_cols=39  Identities=33%  Similarity=0.504  Sum_probs=35.4

Q ss_pred             CCCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            1 MELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         1 ~~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      |+|. +|+++|||++  +|||++++++|+++|++|++++|++
T Consensus         4 ~~l~-~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~   44 (297)
T 1d7o_A            4 IDLR-GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP   44 (297)
T ss_dssp             CCCT-TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred             cccC-CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccc
Confidence            4567 9999999999  9999999999999999999998753

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.90  E-value=1.6e-09  Score=65.73  Aligned_cols=56  Identities=32%  Similarity=0.293  Sum_probs=43.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTK   77 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~   77 (85)
                      |.++|||++++||++++++|+++|++|++++|+........      ...         +.++.+|++|++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~---------~~~~~~Dl~d~~   56 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV------NPS---------AELHVRDLKDYS   56 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS------CTT---------SEEECCCTTSTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc------CCC---------ceEEECccccHH
Confidence            46999999999999999999999999999998765432211      112         778888888753

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=98.90  E-value=2.2e-09  Score=66.27  Aligned_cols=65  Identities=18%  Similarity=0.158  Sum_probs=49.0

Q ss_pred             EEEEecCCChHHHHHHHHHHhC-CCEEEEEecCcc--chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            8 SAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEE--KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++|||++++||.+++++|++. |++|++++|+..  ..+.+. .+.          ....+.++.+|++|+++ .++++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~-~~~----------~~~~~~~~~~Dl~d~~~~~~~~~   70 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS-DIS----------ESNRYNFEHADICDSAEITRIFE   70 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT-TTT----------TCTTEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhh-hhh----------cCCCeEEEECCCCCHHHHHHHHh
Confidence            5899999999999999999997 799999998652  222211 111          01238899999999999 88775

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=98.87  E-value=4.5e-09  Score=64.36  Aligned_cols=39  Identities=33%  Similarity=0.530  Sum_probs=35.2

Q ss_pred             CCCCCCcEEEEecC--CChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            1 MELKPGLSAFVTGG--ASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         1 ~~l~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      |+|. +|+++|||+  ++|||++++++|+++|++|++++|++
T Consensus         5 ~~l~-gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~   45 (315)
T 2o2s_A            5 IDLR-GQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPP   45 (315)
T ss_dssp             CCCT-TCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHH
T ss_pred             ccCC-CCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEeccc
Confidence            3467 899999999  89999999999999999999998764

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=98.87  E-value=3.7e-09  Score=64.73  Aligned_cols=65  Identities=26%  Similarity=0.287  Sum_probs=48.0

Q ss_pred             EEEEecCCChHHHHHHHHHHhC---C---CEEEEEecCcc--chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            8 SAFVTGGASGIGRALSLALAGK---G---VFVTVVDLSEE--KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~---g---~~v~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      .++|||++++||.+++++|+++   |   ++|++++|+..  ..+.+ ..+.          ....+.++.+|++|+++ 
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~----------~~~~~~~~~~Dl~d~~~~   70 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD----------ADPRLRFVHGDIRDAGLL   70 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT----------TCTTEEEEECCTTCHHHH
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc----------cCCCeEEEEcCCCCHHHH
Confidence            5899999999999999999997   8   89999998642  11111 0110          01238899999999998 


Q ss_pred             HHHhh
Q 034737           79 ALAFL   83 (85)
Q Consensus        79 ~~~~~   83 (85)
                      .+++.
T Consensus        71 ~~~~~   75 (337)
T 1r6d_A           71 ARELR   75 (337)
T ss_dssp             HHHTT
T ss_pred             HHHhc
Confidence            87753

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=98.79  E-value=6.1e-09  Score=63.26  Aligned_cols=55  Identities=31%  Similarity=0.303  Sum_probs=46.3

Q ss_pred             EEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            9 AFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++|||++++||.+++++|+++  |++|++++|+.....           .         +.++.+|++|+++ .++++
T Consensus         2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~---------~~~~~~D~~d~~~~~~~~~   59 (317)
T 3ajr_A            2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------G---------IKFITLDVSNRDEIDRAVE   59 (317)
T ss_dssp             EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------T---------CCEEECCTTCHHHHHHHHH
T ss_pred             EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------C---------ceEEEecCCCHHHHHHHHh
Confidence            799999999999999999998  889999988764421           2         6788899999988 87765

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=98.78  E-value=6.4e-09  Score=63.96  Aligned_cols=36  Identities=36%  Similarity=0.304  Sum_probs=33.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      ++.++|||++++||.+++++|+.+|++|++++|+..
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   62 (343)
T 2b69_A           27 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT   62 (343)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             CCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence            789999999999999999999999999999998753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.78  E-value=1e-08  Score=66.25  Aligned_cols=73  Identities=12%  Similarity=0.017  Sum_probs=49.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc---hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK---GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      .++++|||++|+||.+++++|...|++|++++|+...   ...+.+.+.............+++.++.+|++++++
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  225 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  225 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSS
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCccccc
Confidence            4789999999999999999999999999999998763   333333332220000000001238999999998654

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.78  E-value=4.8e-08  Score=58.60  Aligned_cols=54  Identities=19%  Similarity=0.069  Sum_probs=44.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      .+.++|||+ |+||.+++++|+++|++|++++|++........      ..         +.++.+|++|
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~---------~~~~~~D~~d   58 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SG---------AEPLLWPGEE   58 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TT---------EEEEESSSSC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CC---------CeEEEecccc
Confidence            367999998 999999999999999999999999876544322      22         7888888876

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=98.77  E-value=1.4e-08  Score=59.80  Aligned_cols=35  Identities=40%  Similarity=0.427  Sum_probs=32.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      |+++|||++++||++++++|+++|++|++++|+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~   36 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQA   36 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence            47999999999999999999999999999999864

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.77  E-value=7.9e-09  Score=62.78  Aligned_cols=60  Identities=25%  Similarity=0.235  Sum_probs=43.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++++|||++++||.+++++|+++|..+++..++....+..       ...         +.++.+|+++ ++ .++++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~-------~~~---------~~~~~~Dl~~-~~~~~~~~   62 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV-------NEA---------ARLVKADLAA-DDIKDYLK   62 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS-------CTT---------EEEECCCTTT-SCCHHHHT
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc-------CCC---------cEEEECcCCh-HHHHHHhc
Confidence            3699999999999999999999995555544444322111       112         7889999998 77 77654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=98.75  E-value=1.7e-08  Score=67.14  Aligned_cols=59  Identities=17%  Similarity=0.179  Sum_probs=46.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      +++++|||++++||.+++++|+++ |++|++++|+........     ..         ..+.++.+|++++++
T Consensus       315 ~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~---------~~v~~v~~Dl~d~~~  374 (660)
T 1z7e_A          315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NH---------PHFHFVEGDISIHSE  374 (660)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TC---------TTEEEEECCTTTCHH
T ss_pred             CceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cC---------CceEEEECCCCCcHH
Confidence            689999999999999999999998 899999999875432211     01         128899999998653

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=98.71  E-value=6.2e-09  Score=64.33  Aligned_cols=37  Identities=41%  Similarity=0.471  Sum_probs=32.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEK   42 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~   42 (85)
                      ++.++|||++++||.+++++|+++| ++|++++|+...
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   83 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG   83 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSG
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCc
Confidence            6789999999999999999999999 899999987643

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=98.70  E-value=2.7e-08  Score=59.85  Aligned_cols=35  Identities=29%  Similarity=0.506  Sum_probs=32.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .+.++|||++++||.+++++|+++|++|++++|+.
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   46 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD   46 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc
Confidence            57899999999999999999999999999998864

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.68  E-value=8e-08  Score=52.47  Aligned_cols=60  Identities=27%  Similarity=0.225  Sum_probs=47.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      .+.++|+|+ +.+|..+++.|...|++|++++++++..+.+.+    .  .         +.++.+|.++++. +++
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~--~---------~~~~~gd~~~~~~l~~~   66 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E--G---------FDAVIADPTDESFYRSL   66 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--T---------CEEEECCTTCHHHHHHS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C--C---------CcEEECCCCCHHHHHhC
Confidence            567999998 779999999999999999999999876555432    1  1         5677888888876 543

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.66  E-value=2.3e-07  Score=58.92  Aligned_cols=69  Identities=13%  Similarity=0.161  Sum_probs=55.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCC---CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKG---VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g---~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      +.++|+|+ ++||+.+++.|++.|   ..|++.+|+.++++.+.+.+...+.        .++.++.+|+++.++ ++++
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~--------~~~~~~~~D~~d~~~l~~~l   72 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGY--------GEIDITTVDADSIEELVALI   72 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTC--------CCCEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcC--------CceEEEEecCCCHHHHHHHH
Confidence            36888898 899999999999998   4899999999888888777654321        127889999999999 8887


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      +.
T Consensus        73 ~~   74 (405)
T 4ina_A           73 NE   74 (405)
T ss_dssp             HH
T ss_pred             Hh
Confidence            64

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.62  E-value=8.8e-08  Score=56.73  Aligned_cols=37  Identities=35%  Similarity=0.453  Sum_probs=33.3

Q ss_pred             CCCCcEEEEecC----------------CChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            3 LKPGLSAFVTGG----------------ASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         3 l~~~~~~litG~----------------~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      |. ||+++||||                +++||.++++.|+.+|++|++++++.
T Consensus         6 l~-gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~   58 (226)
T 1u7z_A            6 LK-HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV   58 (226)
T ss_dssp             TT-TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred             CC-CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc
Confidence            56 999999999                58999999999999999999987653

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=98.62  E-value=8.2e-08  Score=58.36  Aligned_cols=34  Identities=21%  Similarity=0.307  Sum_probs=31.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++.++|||++++||.+++++|+.+|++|++++|+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~   36 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   36 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecC
Confidence            6789999999999999999999999999888775

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=98.58  E-value=8.6e-08  Score=58.07  Aligned_cols=36  Identities=39%  Similarity=0.392  Sum_probs=33.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      +++++|||++++||.+++++|+++|++|++++|+..
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            689999999999999999999999999999998764

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.57  E-value=1.2e-07  Score=57.28  Aligned_cols=35  Identities=34%  Similarity=0.419  Sum_probs=32.3

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      .++||||+|.||++++++|+++|++|+++.|++..
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~   36 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP   36 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence            59999999999999999999999999999997643

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=98.57  E-value=6.9e-08  Score=58.17  Aligned_cols=32  Identities=19%  Similarity=0.253  Sum_probs=30.0

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .++|||++++||.+++++|+ +|++|++++|+.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~   33 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHS   33 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEecccc
Confidence            68999999999999999999 899999999875

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=98.56  E-value=2e-07  Score=55.43  Aligned_cols=52  Identities=23%  Similarity=0.175  Sum_probs=41.1

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +++|||++++||++++++|++ |++|++++|++...            .         -  +.+|++|+++ .++++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~------------~---------~--~~~Dl~~~~~~~~~~~   54 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ------------G---------G--YKLDLTDFPRLEDFII   54 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT------------T---------C--EECCTTSHHHHHHHHH
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC------------C---------C--ceeccCCHHHHHHHHH
Confidence            589999999999999999995 89999999986320            0         0  5678887777 66654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.55  E-value=8.4e-08  Score=57.94  Aligned_cols=34  Identities=41%  Similarity=0.483  Sum_probs=31.3

Q ss_pred             EEEecCCChHHHHHHHHHHhCC-CEEEEEecCccc
Q 034737            9 AFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEK   42 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~   42 (85)
                      ++|||++++||.+++++|+++| +.|++++|+...
T Consensus         2 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   36 (310)
T 1eq2_A            2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG   36 (310)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG
T ss_pred             EEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCC
Confidence            7999999999999999999999 899999987654

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.53  E-value=1.7e-07  Score=60.25  Aligned_cols=64  Identities=22%  Similarity=0.175  Sum_probs=49.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++.++|+| ++++|+++++.|+..|++|++++|+.++++.+.+.+    ..         +.++.+|+++.++ .+++.
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~---------~~~~~~Dv~d~~~l~~~l~   67 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QH---------STPISLDVNDDAALDAEVA   67 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TT---------EEEEECCTTCHHHHHHHHT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CC---------ceEEEeecCCHHHHHHHHc
Confidence            67899997 799999999999999999999999876554432211    11         6778899999888 77654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=98.52  E-value=1e-07  Score=57.13  Aligned_cols=33  Identities=18%  Similarity=0.227  Sum_probs=31.0

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .++|||++++||.+++++|+++|++|++++|..
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL   39 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc
Confidence            799999999999999999999999999998854

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.50  E-value=2.4e-06  Score=52.84  Aligned_cols=50  Identities=14%  Similarity=0.298  Sum_probs=42.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC---ccchHHHHHHHHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS---EEKGNEVAALVEKE   53 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~---~~~~~~~~~~l~~~   53 (85)
                      ++. +|+++|+|+ +|+|++++..|...|+ +|+++.|+   .++++.+.+++...
T Consensus       151 ~l~-gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~  204 (315)
T 3tnl_A          151 DII-GKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK  204 (315)
T ss_dssp             CCT-TSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH
T ss_pred             Ccc-CCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh
Confidence            356 899999997 7999999999999998 89999999   66777777666543

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.44  E-value=2.5e-06  Score=51.97  Aligned_cols=51  Identities=27%  Similarity=0.419  Sum_probs=44.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhh
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENA   55 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~   55 (85)
                      +. +++++|+|+ +|+|++++..|...|+ +|++++|+.++++.+.+.+...+.
T Consensus       125 l~-~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~  176 (283)
T 3jyo_A          125 AK-LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG  176 (283)
T ss_dssp             CC-CSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             cC-CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcC
Confidence            45 899999998 7999999999999998 799999999988888888776543

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=98.42  E-value=1.7e-07  Score=56.42  Aligned_cols=29  Identities=24%  Similarity=0.431  Sum_probs=26.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCC
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGV   31 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~   31 (85)
                      .|. ++.++|||++++||.+++++|+++|+
T Consensus         3 ~~~-~~~vlVtGatG~iG~~l~~~L~~~g~   31 (319)
T 4b8w_A            3 YFQ-SMRILVTGGSGLVGKAIQKVVADGAG   31 (319)
T ss_dssp             CCC-CCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred             ccc-CCeEEEECCCcHHHHHHHHHHHhcCC
Confidence            355 78999999999999999999999986

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.41  E-value=8.7e-07  Score=53.83  Aligned_cols=48  Identities=21%  Similarity=0.367  Sum_probs=41.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      ++. +++++|+|++ |+|+++++.|+..| +|++++|+.++++.+.+++..
T Consensus       125 ~l~-~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~  172 (287)
T 1nvt_A          125 RVK-DKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE  172 (287)
T ss_dssp             CCC-SCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CcC-CCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhh
Confidence            356 8999999987 99999999999999 999999998888777776654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.40  E-value=7.5e-07  Score=52.94  Aligned_cols=35  Identities=20%  Similarity=0.400  Sum_probs=32.2

Q ss_pred             CcEEEEecC----------------CChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGG----------------ASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~----------------~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ||+++||||                +|++|.++++.++.+|++|++++++.
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~   53 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKR   53 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            899999999                67899999999999999999998753

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.39  E-value=2.8e-07  Score=49.98  Aligned_cols=39  Identities=31%  Similarity=0.295  Sum_probs=32.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG   43 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~   43 (85)
                      +. ++.++|+|+ +.+|..+++.|...|++|++++++++..
T Consensus         4 ~~-~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~   42 (144)
T 2hmt_A            4 IK-NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV   42 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH
T ss_pred             Cc-CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            44 678999998 9999999999999999999999986543

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.39  E-value=5e-07  Score=51.78  Aligned_cols=42  Identities=19%  Similarity=0.230  Sum_probs=36.6

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      .++++++|+|+++|||..+++.+...|++|+++++++++.+.
T Consensus        37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~   78 (198)
T 1pqw_A           37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM   78 (198)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH
T ss_pred             CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            358899999999999999999999999999999998765443

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.36  E-value=1.7e-06  Score=55.90  Aligned_cols=65  Identities=18%  Similarity=0.165  Sum_probs=49.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +. ++.++|+|+ +++|+++++.|++. +++|++++|+.++++.+.+.     ..         +.++.+|+.+.++ .+
T Consensus        21 l~-~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~---------~~~~~~D~~d~~~l~~   84 (467)
T 2axq_A           21 HM-GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SG---------SKAISLDVTDDSALDK   84 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GT---------CEEEECCTTCHHHHHH
T ss_pred             CC-CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cC---------CcEEEEecCCHHHHHH
Confidence            45 778999997 99999999999998 78899999998766554432     12         5677889998887 76


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      ++.
T Consensus        85 ~l~   87 (467)
T 2axq_A           85 VLA   87 (467)
T ss_dssp             HHH
T ss_pred             HHc
Confidence            654

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.35  E-value=3e-06  Score=46.85  Aligned_cols=63  Identities=21%  Similarity=0.139  Sum_probs=46.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      .+.++|.|+ +.+|..+++.|...|+.|+++++++ +..+.......   ..         +.++.+|.++++. .++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~---~~---------~~~i~gd~~~~~~l~~a   67 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---DN---------ADVIPGDSNDSSVLKKA   67 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---TT---------CEEEESCTTSHHHHHHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc---CC---------CeEEEcCCCCHHHHHHc
Confidence            567888886 9999999999999999999999974 43433332211   12         6788899998887 654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.34  E-value=1e-06  Score=57.23  Aligned_cols=37  Identities=32%  Similarity=0.337  Sum_probs=34.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      ++.++|||++|+||.++++.|+..|++|++++|+...
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~  183 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK  183 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence            4689999999999999999999999999999998654

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.33  E-value=1.6e-06  Score=52.31  Aligned_cols=46  Identities=26%  Similarity=0.408  Sum_probs=40.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      +. +++++|+|+ +|+|++++..|+..|++|++++|+.++++.+.+.+
T Consensus       117 l~-~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~  162 (271)
T 1nyt_A          117 RP-GLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLF  162 (271)
T ss_dssp             CT-TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHT
T ss_pred             cC-CCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHh
Confidence            45 899999998 79999999999999999999999988777776655

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.26  E-value=2.8e-06  Score=55.25  Aligned_cols=43  Identities=23%  Similarity=0.300  Sum_probs=37.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      .+. ||+++|+|++ +||+.+++.|...|++|+++++++......
T Consensus       262 ~L~-GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~A  304 (488)
T 3ond_A          262 MIA-GKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQA  304 (488)
T ss_dssp             CCT-TCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             ccc-CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            467 9999999987 999999999999999999999987654443

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.24  E-value=3.3e-06  Score=51.94  Aligned_cols=42  Identities=24%  Similarity=0.211  Sum_probs=37.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      ++++++|+|++++||..+++.+...|++|+++++++++.+.+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~  186 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL  186 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999987665554

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.21  E-value=9.7e-06  Score=43.60  Aligned_cols=40  Identities=20%  Similarity=0.426  Sum_probs=33.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      ++.++|+|+ +.+|..+++.|.+.|++|++++++++..+..
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~   43 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKA   43 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            467888887 9999999999999999999999987655443

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.14  E-value=5.6e-06  Score=50.93  Aligned_cols=43  Identities=26%  Similarity=0.301  Sum_probs=37.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      .++++++|+|++++||..+++.+...|++|+++++++++.+.+
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~  186 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA  186 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3478999999999999999999999999999999987665544

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.13  E-value=3.8e-06  Score=52.15  Aligned_cols=32  Identities=19%  Similarity=0.281  Sum_probs=30.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCC-EEEEEec
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGV-FVTVVDL   38 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~   38 (85)
                      +.++|||++|+||++++++|+++|+ +|+.+++
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~   33 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHR   33 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECC
Confidence            3699999999999999999999999 9999998

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.13  E-value=9.6e-06  Score=50.20  Aligned_cols=41  Identities=24%  Similarity=0.232  Sum_probs=36.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++++++|+|++++||..+++.+...|++|+++++++++.+.
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~  209 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEEL  209 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHH
Confidence            47899999999999999999999999999999998776543

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.13  E-value=7e-06  Score=49.57  Aligned_cols=47  Identities=15%  Similarity=0.200  Sum_probs=41.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      +. ++.++|+|+ +|+|++++..|+..|++|++++|+.++++.+.+.+.
T Consensus       117 ~~-~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~  163 (272)
T 1p77_A          117 RP-NQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQ  163 (272)
T ss_dssp             CT-TCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHG
T ss_pred             cC-CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcc
Confidence            45 889999998 799999999999999999999999988887776653

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.12  E-value=5.3e-06  Score=50.91  Aligned_cols=43  Identities=14%  Similarity=0.102  Sum_probs=37.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++++++|+|++++||..+++.+...|++|+++++++++.+.+.
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~  182 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL  182 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            4889999999999999999999999999999999876655443

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.12  E-value=5.8e-05  Score=46.61  Aligned_cols=49  Identities=20%  Similarity=0.312  Sum_probs=41.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC---ccchHHHHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS---EEKGNEVAALVEKE   53 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~---~~~~~~~~~~l~~~   53 (85)
                      +. ++.++|+|+ +|.|++++..|...|+ +|.++.|+   .++++.+.+++...
T Consensus       146 l~-gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~  198 (312)
T 3t4e_A          146 MR-GKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN  198 (312)
T ss_dssp             CT-TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH
T ss_pred             cC-CCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc
Confidence            45 899999997 8999999999999998 79999999   66677777666543

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.11  E-value=2.2e-06  Score=55.97  Aligned_cols=44  Identities=27%  Similarity=0.429  Sum_probs=36.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      +++++|+|+ +|+|++++..|+..|++|++++|+.++++.+.+.+
T Consensus       364 ~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~  407 (523)
T 2o7s_A          364 SKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI  407 (523)
T ss_dssp             --CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc
Confidence            789999999 59999999999999999999999988777766554

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.11  E-value=5.7e-06  Score=50.92  Aligned_cols=44  Identities=23%  Similarity=0.223  Sum_probs=38.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      +.++++++|+|++++||..+++.+...|++|+++++++++.+.+
T Consensus       147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  190 (336)
T 4b7c_A          147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL  190 (336)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            33588999999999999999999999999999999988766655

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.11  E-value=9e-06  Score=47.32  Aligned_cols=59  Identities=20%  Similarity=0.241  Sum_probs=46.4

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      .++|.|+ +.+|..+++.|...|+.|++++++++..+.+.+..     .         +.++.+|.++++. +++
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~---------~~~i~gd~~~~~~l~~a   61 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----K---------ATIIHGDGSHKEILRDA   61 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----S---------SEEEESCTTSHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----C---------CeEEEcCCCCHHHHHhc
Confidence            4788986 88999999999999999999999987666543321     1         5678888888776 553

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.11  E-value=1.6e-05  Score=43.36  Aligned_cols=58  Identities=17%  Similarity=0.242  Sum_probs=45.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +.++|.|+ +.+|..+++.|...|+.|++++++++..+.+.+      ..         +.++.+|.++++. ++
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~------~g---------~~~i~gd~~~~~~l~~   66 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE------RG---------VRAVLGNAANEEIMQL   66 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH------TT---------CEEEESCTTSHHHHHH
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH------cC---------CCEEECCCCCHHHHHh
Confidence            46888887 889999999999999999999999876655432      12         6677888888776 54

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.09  E-value=1.4e-05  Score=50.18  Aligned_cols=43  Identities=21%  Similarity=0.358  Sum_probs=37.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +. +++++|+|+ ++||..+++.+...|++|+++++++++.+.+.
T Consensus       164 l~-~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~  206 (369)
T 2eez_A          164 VA-PASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLD  206 (369)
T ss_dssp             BC-CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CC-CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            45 789999999 99999999999999999999999987655443

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.09  E-value=1e-05  Score=50.30  Aligned_cols=43  Identities=23%  Similarity=0.222  Sum_probs=38.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      .++++++|+|++++||..+++.+...|++|+++++++++.+.+
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  203 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA  203 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3478999999999999999999999999999999988766554

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.07  E-value=1.2e-05  Score=49.93  Aligned_cols=41  Identities=27%  Similarity=0.320  Sum_probs=36.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      .++++++|+|+++++|..+++.+...|++|+++++++++.+
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~  209 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK  209 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH
Confidence            35789999999999999999999999999999999876655

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=98.06  E-value=1.9e-05  Score=48.07  Aligned_cols=48  Identities=27%  Similarity=0.392  Sum_probs=41.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      +. +++++|+|+ +|+|++++..|...|+ +|.++.|+.++.+.+.+.+..
T Consensus       124 l~-~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~  172 (281)
T 3o8q_A          124 LK-GATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA  172 (281)
T ss_dssp             CT-TCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG
T ss_pred             cc-CCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc
Confidence            45 899999997 7999999999999996 899999999888888777653

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.05  E-value=1.1e-05  Score=49.69  Aligned_cols=44  Identities=20%  Similarity=0.288  Sum_probs=38.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      .++++++|+|+++++|..+++.+...|++|+++++++++.+.+.
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~  197 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK  197 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            34889999999999999999999999999999999877655543

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.05  E-value=1.3e-05  Score=49.81  Aligned_cols=43  Identities=21%  Similarity=0.105  Sum_probs=37.4

Q ss_pred             CC--cEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHH
Q 034737            5 PG--LSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVA   47 (85)
Q Consensus         5 ~~--~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~   47 (85)
                      ++  ++++|+|++++||..+++.+...|+ +|+++++++++.+.+.
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~  203 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLT  203 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence            46  8999999999999999999999999 9999999876655543

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=98.03  E-value=2.3e-05  Score=47.53  Aligned_cols=47  Identities=15%  Similarity=0.219  Sum_probs=41.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~   51 (85)
                      +. ++.++|+|+ +|+|++++..|...|+ +|.++.|+.++++.+.+.+.
T Consensus       118 l~-~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A          118 LR-NRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             CT-TSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             cc-CCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            45 899999997 7999999999999996 89999999988888777654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.95  E-value=2.5e-05  Score=48.50  Aligned_cols=44  Identities=27%  Similarity=0.280  Sum_probs=38.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      .++++++|+|+++++|..+++.+...|++|+++++++++.+.+.
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~  209 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE  209 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            35789999999999999999999999999999999887665443

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.94  E-value=2.1e-05  Score=48.67  Aligned_cols=42  Identities=24%  Similarity=0.348  Sum_probs=36.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~   46 (85)
                      ++++++|+|++++||..+++.+... |++|+++++++++.+.+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~  212 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA  212 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4789999999999999999999998 99999999988765544

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.93  E-value=4.1e-05  Score=47.36  Aligned_cols=43  Identities=30%  Similarity=0.306  Sum_probs=37.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++++++|+|+++++|...++.+...|++|+++++++++.+.+.
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~  201 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK  201 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            4889999999999999999999999999999999887765443

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.92  E-value=2.8e-05  Score=48.01  Aligned_cols=44  Identities=25%  Similarity=0.225  Sum_probs=38.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      +.++++++|+|+++++|..+++.+...|++|+++++++++.+.+
T Consensus       164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~  207 (343)
T 2eih_A          164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA  207 (343)
T ss_dssp             CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            33478999999999999999999999999999999988766554

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.91  E-value=3.3e-05  Score=47.52  Aligned_cols=44  Identities=27%  Similarity=0.314  Sum_probs=37.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      +.++++++|+|+++++|...++.+...|++|+++++++++.+.+
T Consensus       146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  189 (334)
T 3qwb_A          146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA  189 (334)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            33588999999999999999999999999999999987765533

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.91  E-value=4.1e-05  Score=46.47  Aligned_cols=42  Identities=24%  Similarity=0.227  Sum_probs=37.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      ++++++|+|+++++|...++.+...|++|+++++++++.+.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999988776654

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.88  E-value=6.4e-05  Score=44.87  Aligned_cols=50  Identities=26%  Similarity=0.349  Sum_probs=41.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc-------------------cchHHHHHHHHHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE-------------------EKGNEVAALVEKENAK   56 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~l~~~~~~   56 (85)
                      ++.++|.|+ +|+|..+++.|+..|. ++.++|++.                   .+.+.+.+.+...++.
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~  100 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH  100 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCC
Confidence            578899986 7999999999999997 899999887                   6777787777765544

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.86  E-value=4.1e-05  Score=47.27  Aligned_cols=44  Identities=14%  Similarity=0.087  Sum_probs=38.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      .++++++|+|+++++|...++.+...|++|+++++++++.+.+.
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~  186 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL  186 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            35889999999999999999998889999999999887766554

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.86  E-value=4.5e-05  Score=46.66  Aligned_cols=45  Identities=20%  Similarity=0.330  Sum_probs=38.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~   49 (85)
                      +. ++.++|.|+ +++|++++..|...|+ +|++++|+.++++.+.+.
T Consensus       139 l~-~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~  184 (297)
T 2egg_A          139 LD-GKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVRE  184 (297)
T ss_dssp             CT-TCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHH
T ss_pred             CC-CCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            45 889999997 7999999999999998 899999998777766544

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.85  E-value=3.4e-05  Score=47.37  Aligned_cols=44  Identities=23%  Similarity=0.215  Sum_probs=38.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      .++++++|+|+++++|...++.+...|++|+++++++++.+.+.
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~  182 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK  182 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            35889999999999999999999999999999999887665443

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=97.84  E-value=3.1e-05  Score=47.71  Aligned_cols=34  Identities=24%  Similarity=0.460  Sum_probs=30.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCC-------EEEEEecCc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGV-------FVTVVDLSE   40 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~-------~v~~~~~~~   40 (85)
                      +.++|||++|+||.+++..|+.+|+       .|+++++++
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~   45 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ   45 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence            5699999999999999999999886       799998865

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.83  E-value=3.7e-05  Score=43.45  Aligned_cols=40  Identities=18%  Similarity=0.258  Sum_probs=33.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~   46 (85)
                      ++.++|.|+ +.+|..+++.|... |+.|+++++++++.+.+
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~   79 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQH   79 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHH
Confidence            556888885 99999999999999 99999999998765543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.83  E-value=4.5e-05  Score=47.56  Aligned_cols=43  Identities=23%  Similarity=0.166  Sum_probs=37.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      .++++++|+|+++++|...++.+...|++|+++++++++.+.+
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~  204 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL  204 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            3478999999999999999999999999999999987655544

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.80  E-value=8.3e-06  Score=45.55  Aligned_cols=60  Identities=17%  Similarity=0.133  Sum_probs=44.1

Q ss_pred             ChHHHHHHHHHHhCCCEEEEEecCccchH---HHHHHHHHHhhhccCCCCCCceEEEEecCCCH--HH-HHHhhh
Q 034737           16 SGIGRALSLALAGKGVFVTVVDLSEEKGN---EVAALVEKENAKFHSNLGFPSAMFIRCDVTNT--KF-ALAFLR   84 (85)
Q Consensus        16 ~gig~~~~~~l~~~g~~v~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~--~~-~~~~~~   84 (85)
                      +.++.++++.|++.|++|++.++++....   ...+.+...+..         +..+.+|++++  ++ +++++.
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~---------~~~i~~Dv~~~~~~~v~~~~~~   91 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMD---------YVYIPVDWQNPKVEDVEAFFAA   91 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCE---------EEECCCCTTSCCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCe---------EEEecCCCCCCCHHHHHHHHHH
Confidence            45778999999999999999988764432   234444444444         78899999999  88 887764

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.78  E-value=0.0001  Score=42.50  Aligned_cols=42  Identities=33%  Similarity=0.407  Sum_probs=35.7

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~   49 (85)
                      .+.|.|+++.+|..+++.|.+.|++|++++|++++.+...+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            477889899999999999999999999999998766655443

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.77  E-value=5.9e-05  Score=48.69  Aligned_cols=61  Identities=16%  Similarity=0.276  Sum_probs=49.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      .+.++|.|+ |-+|..+++.|...|++|++++.+++.++.+.+.+.              +.++.+|-++++- +++
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~--------------~~~i~Gd~~~~~~L~~A   64 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYD--------------LRVVNGHASHPDVLHEA   64 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSS--------------CEEEESCTTCHHHHHHH
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC--------------cEEEEEcCCCHHHHHhc
Confidence            467888887 789999999999999999999999987776654431              6788899998887 554

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.71  E-value=0.00013  Score=40.20  Aligned_cols=39  Identities=21%  Similarity=0.182  Sum_probs=34.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++.++|.|+ +.+|..+++.|...|++|++++++++..+.
T Consensus        19 ~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~   57 (155)
T 2g1u_A           19 SKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR   57 (155)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence            678999986 999999999999999999999998876543

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.70  E-value=0.0001  Score=47.09  Aligned_cols=43  Identities=23%  Similarity=0.249  Sum_probs=37.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      .++++++|+|++++||...++.+...|++|+++++++++.+.+
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~  261 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV  261 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3588999999999999999999999999999998877665544

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.68  E-value=0.00013  Score=45.08  Aligned_cols=43  Identities=19%  Similarity=0.237  Sum_probs=37.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++.+++|+|+++++|...++.+...|++|+++++++++.+.+.
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~  192 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK  192 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            3889999999999999999999999999999999876655443

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.68  E-value=0.00045  Score=42.34  Aligned_cols=71  Identities=13%  Similarity=0.187  Sum_probs=52.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc------------------cchHHHHHHHHHHhhhccCCCCC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE------------------EKGNEVAALVEKENAKFHSNLGF   63 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~------------------~~~~~~~~~l~~~~~~~~~~~~~   63 (85)
                      |. ++.++|.|+ +|+|..+++.|+..|. ++.++|.+.                  .+.+.+.+.+...++..+     
T Consensus        34 L~-~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~-----  106 (292)
T 3h8v_A           34 IR-TFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVL-----  106 (292)
T ss_dssp             GG-GCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSE-----
T ss_pred             Hh-CCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcE-----
Confidence            44 678888876 8999999999999885 788888765                  567777777777766543     


Q ss_pred             CceEEEEecCCCHHH-HHHh
Q 034737           64 PSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus        64 ~~~~~~~~Dv~~~~~-~~~~   82 (85)
                        +..+..++++.+. +.++
T Consensus       107 --v~~~~~~l~~~~~~~~~~  124 (292)
T 3h8v_A          107 --FEVHNYNITTVENFQHFM  124 (292)
T ss_dssp             --EEEECCCTTSHHHHHHHH
T ss_pred             --EEEecccCCcHHHHHHHh
Confidence              6667777776555 5443

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.64  E-value=0.00015  Score=44.85  Aligned_cols=42  Identities=17%  Similarity=0.067  Sum_probs=36.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +++++|+|+++++|...++.+...|++|+++++++++.+.+.
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~  206 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK  206 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            379999999999999999999899999999999887765543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.62  E-value=0.00043  Score=43.23  Aligned_cols=60  Identities=22%  Similarity=0.285  Sum_probs=46.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +.++|.|+ |++|+.+++.|.+ .++|.+.+++.++++.+.       ..         +..+.+|+.|.++ .++++.
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~~---------~~~~~~d~~d~~~l~~~~~~   77 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------EF---------ATPLKVDASNFDKLVEVMKE   77 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------TT---------SEEEECCTTCHHHHHHHHTT
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------cc---------CCcEEEecCCHHHHHHHHhC
Confidence            45888888 9999999998865 579999999886655432       12         5678899999999 887653

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.60  E-value=0.00015  Score=45.21  Aligned_cols=38  Identities=21%  Similarity=0.229  Sum_probs=34.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc---cchH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE---EKGN   44 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~---~~~~   44 (85)
                      +++++|+|+ +++|..+++.+...|++|+++++++   ++.+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  221 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT  221 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH
Confidence            889999999 9999999999999999999999987   5543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.59  E-value=8.2e-05  Score=40.61  Aligned_cols=44  Identities=14%  Similarity=0.088  Sum_probs=37.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      ++.++|.|+ |++|..+++.|...|++|++++|++++.+.+.+.+
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            678999996 99999999999999999989999988777665544

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.59  E-value=0.00027  Score=44.20  Aligned_cols=42  Identities=19%  Similarity=0.288  Sum_probs=37.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      +++++|.|+ +++|+.+++.+...|++|++++|++++++.+.+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~  208 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLET  208 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence            689999998 999999999999999999999999877666543

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.57  E-value=0.00012  Score=42.92  Aligned_cols=58  Identities=17%  Similarity=0.110  Sum_probs=44.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      .+.++|.|+ +.+|..+++.|...|+ |++++++++..+.+.       ..         +.++.+|.++++. +++
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-------~~---------~~~i~gd~~~~~~l~~a   67 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-------SG---------ANFVHGDPTRVSDLEKA   67 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-------TT---------CEEEESCTTCHHHHHHT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-------cC---------CeEEEcCCCCHHHHHhc
Confidence            457889987 8999999999999999 999999887654432       12         6778888888876 544

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.56  E-value=0.00034  Score=42.38  Aligned_cols=41  Identities=24%  Similarity=0.314  Sum_probs=37.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++.++|.|+ +|.|++++..|...|.+|.++.|+.++++.+.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            678999986 99999999999999999999999998888776

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.54  E-value=0.00032  Score=44.20  Aligned_cols=43  Identities=23%  Similarity=0.317  Sum_probs=37.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +. +++++|.|+ |+||..+++.+...|++|+++++++++.+.+.
T Consensus       166 l~-g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~  208 (377)
T 2vhw_A          166 VE-PADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLD  208 (377)
T ss_dssp             BC-CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CC-CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            45 889999998 99999999999999999999999887655443

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=97.53  E-value=0.00038  Score=43.86  Aligned_cols=47  Identities=26%  Similarity=0.336  Sum_probs=39.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      +|. +|+++|.|. +.+|..++++|...|++|++.+++.++++...+++
T Consensus       170 ~L~-GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLE-GLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCT-TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCC-cCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            466 899999987 78999999999999999999999887666555543

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.52  E-value=0.00027  Score=43.63  Aligned_cols=41  Identities=27%  Similarity=0.336  Sum_probs=35.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      ++++++|+|+ +++|...++.+...|++|+++++++++.+.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  204 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA  204 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            4789999999 8899999999999999999999987766544

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.51  E-value=0.00029  Score=43.59  Aligned_cols=41  Identities=17%  Similarity=0.295  Sum_probs=34.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      .++.+++|+|+++++|...++.+...|++|+++ +++++.+.
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~  189 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY  189 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH
Confidence            357899999999999999999999999999888 66655443

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.50  E-value=0.00028  Score=45.24  Aligned_cols=43  Identities=21%  Similarity=0.224  Sum_probs=36.9

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      .++.+++|+|+++++|...+..+...|++++++++++++.+.+
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~  269 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC  269 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3578999999999999999999999999999998877665544

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.46  E-value=0.00042  Score=42.23  Aligned_cols=44  Identities=27%  Similarity=0.257  Sum_probs=37.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~   48 (85)
                      +. ++.++|.|+ +|.|++++..|...|+ +|.++.|+.++++.+.+
T Consensus       120 ~~-~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          120 IK-NNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CT-TSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             cc-CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            45 889999987 6999999999999998 89999999877766544

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.44  E-value=0.00027  Score=43.33  Aligned_cols=40  Identities=23%  Similarity=0.304  Sum_probs=35.2

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +++|+|+++++|...++.+...|++|+++++++++.+.+.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~  191 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR  191 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            7999999999999999998889999999999887766553

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.38  E-value=0.0004  Score=44.33  Aligned_cols=60  Identities=18%  Similarity=0.217  Sum_probs=46.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +..++|.|. +-+|..+++.|...|..|++++++++..+.+..    .  .         +.++.+|.++++. +++
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~--g---------~~vi~GDat~~~~L~~a   64 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F--G---------MKVFYGDATRMDLLESA   64 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T--T---------CCCEESCTTCHHHHHHT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C--C---------CeEEEcCCCCHHHHHhc
Confidence            356889987 779999999999999999999999876655432    1  1         5667788887776 543

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.38  E-value=0.00017  Score=43.84  Aligned_cols=41  Identities=15%  Similarity=0.186  Sum_probs=35.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNE   45 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~   45 (85)
                      +. ++.++|.|+ +|.|++++..|...|+ +|.++.|+.++.+.
T Consensus       115 l~-~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~  156 (277)
T 3don_A          115 IE-DAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN  156 (277)
T ss_dssp             GG-GCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred             cC-CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence            45 789999997 7999999999999998 89999998766543

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.37  E-value=0.0005  Score=43.63  Aligned_cols=45  Identities=27%  Similarity=0.426  Sum_probs=37.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~   49 (85)
                      +. +++++|.|+ |++|..+++.+...|+ +|++++|+.++.+...+.
T Consensus       165 l~-g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~  210 (404)
T 1gpj_A          165 LH-DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD  210 (404)
T ss_dssp             CT-TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH
T ss_pred             cc-CCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            45 899999998 9999999999999998 899999988766554443

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=97.37  E-value=0.00027  Score=43.37  Aligned_cols=42  Identities=24%  Similarity=0.281  Sum_probs=35.8

Q ss_pred             Cc-EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            6 GL-SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         6 ~~-~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +. +++|+|+++++|...++.+...|++|+++++++++.+.+.
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~  192 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK  192 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            44 7999999999999999988888999999999877665543

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.37  E-value=0.00088  Score=41.85  Aligned_cols=41  Identities=20%  Similarity=0.275  Sum_probs=33.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      +.++.+++|+|+++++|...++.+...|++|++++ ++++.+
T Consensus       181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~  221 (375)
T 2vn8_A          181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASE  221 (375)
T ss_dssp             TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHH
Confidence            33578999999999999999999988999998887 444443

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.35  E-value=0.00066  Score=41.47  Aligned_cols=41  Identities=27%  Similarity=0.315  Sum_probs=35.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++ ++|+|+++++|...++.....|++|+++++++++.+.+.
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~  188 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK  188 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            35 999999999999999999999999999999888766654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.29  E-value=0.00049  Score=42.55  Aligned_cols=41  Identities=22%  Similarity=0.228  Sum_probs=35.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~  208 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA  208 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            3789999999 9999999999999999 899999987655544

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.28  E-value=0.00084  Score=41.87  Aligned_cols=42  Identities=29%  Similarity=0.308  Sum_probs=36.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++.+++|+|+ +++|...++.+...|++|+++++++++.+.+.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  228 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL  228 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            4789999995 99999999999999999999999887765544

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.27  E-value=0.00083  Score=41.74  Aligned_cols=43  Identities=26%  Similarity=0.301  Sum_probs=36.6

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      .++.+++|+|+ +++|...++.+...|++|+++++++++.+.+.
T Consensus       178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~  220 (360)
T 1piw_A          178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM  220 (360)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            34789999999 99999999888888999999999887766554

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.26  E-value=0.0021  Score=38.36  Aligned_cols=50  Identities=24%  Similarity=0.365  Sum_probs=38.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc-------------------cchHHHHHHHHHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE-------------------EKGNEVAALVEKENAK   56 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~l~~~~~~   56 (85)
                      ++.++|.|+ +|+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+...++.
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~   97 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPD   97 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCC
Confidence            678999987 7899999999999997 677876542                   4567777777766554

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.25  E-value=0.001  Score=41.41  Aligned_cols=42  Identities=24%  Similarity=0.220  Sum_probs=35.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      .++.+++|+| ++++|...++.+...|++|+++++++++.+.+
T Consensus       188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  229 (363)
T 3uog_A          188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA  229 (363)
T ss_dssp             CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH
Confidence            3578999999 79999999999989999999999987665543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.24  E-value=0.0011  Score=41.01  Aligned_cols=46  Identities=17%  Similarity=0.289  Sum_probs=35.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-------EEEEEecC----ccchHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-------FVTVVDLS----EEKGNEVAALVE   51 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-------~v~~~~~~----~~~~~~~~~~l~   51 (85)
                      .+.++|||++|++|.+++..|+.++.       .|+++|++    +++.+.....+.
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~   61 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEID   61 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHh
Confidence            45799999999999999999999885       78899888    444444344443

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.21  E-value=0.0013  Score=40.78  Aligned_cols=41  Identities=27%  Similarity=0.310  Sum_probs=34.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|+|+ +++|...++.+...|++|+++++++++.+.+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  208 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA  208 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            4789999996 8999999998888999998888887665543

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.19  E-value=0.0012  Score=40.62  Aligned_cols=41  Identities=27%  Similarity=0.391  Sum_probs=34.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|+|+ +++|...++.....|++|+++++++++.+.+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  206 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA  206 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            4789999986 8999999998888999999999987765543

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.18  E-value=0.0016  Score=40.27  Aligned_cols=42  Identities=24%  Similarity=0.241  Sum_probs=36.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++.+++|.|+ +++|...++.....|++|+++++++++.+.+.
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~  217 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL  217 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            4789999987 89999999988889999999999888766543

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=97.17  E-value=0.0016  Score=41.78  Aligned_cols=50  Identities=28%  Similarity=0.222  Sum_probs=37.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      ++. +|.+.+.|. ++.|.+.++.|.++|++|.+.|.++.......+.+.+.
T Consensus         6 ~~~-~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~   55 (451)
T 3lk7_A            6 TFE-NKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEE   55 (451)
T ss_dssp             TTT-TCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHT
T ss_pred             hcC-CCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhC
Confidence            456 889999998 67788899999999999999998764333334455443

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.17  E-value=0.0018  Score=39.44  Aligned_cols=40  Identities=23%  Similarity=0.190  Sum_probs=35.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      +. ++++.|.|+ |.||+.+++.+...|++|++.+++.++.+
T Consensus       155 l~-g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~  194 (300)
T 2rir_A          155 IH-GSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLA  194 (300)
T ss_dssp             ST-TSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CC-CCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            55 899999986 89999999999999999999999876544

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.14  E-value=0.00073  Score=41.62  Aligned_cols=57  Identities=19%  Similarity=0.123  Sum_probs=45.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +.++|.|+ +.+|+.+++.|...|. |++++++++..+ ..+      ..         +.++.+|.++++. +++
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~------~~---------~~~i~gd~~~~~~L~~a  173 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR------SG---------ANFVHGDPTRVSDLEKA  173 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH------TT---------CEEEESCTTSHHHHHHT
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh------CC---------cEEEEeCCCCHHHHHhc
Confidence            47899986 8899999999999999 999999987665 322      22         7788899998887 654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.13  E-value=0.0027  Score=38.29  Aligned_cols=43  Identities=19%  Similarity=0.221  Sum_probs=35.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      +.+.|.|+ +.+|..++..|+..|++|++.+++++.++...+.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            35666665 88999999999999999999999998777766553

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.10  E-value=0.0025  Score=39.87  Aligned_cols=43  Identities=26%  Similarity=0.257  Sum_probs=36.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      .++.+++|.|+ +++|...++.....|++|+++++++++.+.+.
T Consensus       193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~  235 (369)
T 1uuf_A          193 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK  235 (369)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            34789999997 88999999888889999999999887766544

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.10  E-value=0.0011  Score=40.83  Aligned_cols=41  Identities=12%  Similarity=0.092  Sum_probs=34.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|+|+ +++|...++.....  |++|+++++++++.+.+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~  212 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA  212 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH
Confidence            4789999999 89999998888778  99999999887665443

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.10  E-value=0.0015  Score=39.89  Aligned_cols=43  Identities=23%  Similarity=0.414  Sum_probs=36.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. |+.++|.|.++-+|+.++..|+..|+.|.++.+....++.
T Consensus       157 ~l~-Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~  199 (285)
T 3p2o_A          157 DLE-GKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSL  199 (285)
T ss_dssp             CCT-TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred             CCC-CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence            356 9999999998889999999999999999999876655443

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.09  E-value=0.0025  Score=39.55  Aligned_cols=39  Identities=21%  Similarity=0.106  Sum_probs=33.0

Q ss_pred             CCC-cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            4 KPG-LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         4 ~~~-~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      .++ .+++|+|+++++|...++.....|++++++.++.++
T Consensus       165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          165 TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            347 899999999999999888888889999888876654

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.08  E-value=0.0013  Score=41.04  Aligned_cols=41  Identities=20%  Similarity=0.244  Sum_probs=33.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHh-CCCEEEEEecCccchHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAG-KGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~-~g~~v~~~~~~~~~~~~~   46 (85)
                      +.+++|+|+++++|...++.... .|++|+++++++++.+.+
T Consensus       172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~  213 (363)
T 4dvj_A          172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV  213 (363)
T ss_dssp             EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence            77899999999999988877665 689999999987665544

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.05  E-value=0.0026  Score=38.62  Aligned_cols=41  Identities=20%  Similarity=0.198  Sum_probs=35.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      .+. ++++.|.|. |.||+.+++.+...|++|++.+++.++.+
T Consensus       152 ~l~-g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~  192 (293)
T 3d4o_A          152 TIH-GANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA  192 (293)
T ss_dssp             CST-TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCC-CCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            356 899999985 89999999999999999999999876543

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.04  E-value=0.0016  Score=40.50  Aligned_cols=41  Identities=27%  Similarity=0.303  Sum_probs=34.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|+|+ +++|...++..... |++|+++++++++.+.+
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~  227 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA  227 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            4789999999 89999988887777 99999999887665544

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.03  E-value=0.0067  Score=37.97  Aligned_cols=50  Identities=26%  Similarity=0.252  Sum_probs=40.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc-------------------cchHHHHHHHHHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE-------------------EKGNEVAALVEKENAK   56 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~l~~~~~~   56 (85)
                      ++.++|.|+ +|+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.++.
T Consensus        34 ~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~  103 (340)
T 3rui_A           34 NTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL  103 (340)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCC
Confidence            678889877 8999999999999997 678887642                   4677777778777665

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.02  E-value=0.0038  Score=38.74  Aligned_cols=42  Identities=19%  Similarity=0.285  Sum_probs=35.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCccchHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEEKGNEVA   47 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~~~   47 (85)
                      +|.+++|.|+ +++|...++.....|++ |+++++++++.+.+.
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  221 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK  221 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            4788999998 99999999888889997 888888887665544

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=97.01  E-value=0.0021  Score=38.34  Aligned_cols=44  Identities=36%  Similarity=0.506  Sum_probs=36.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~   49 (85)
                      +. + .++|.|+ +++|+++++.|...|++|.+++|+.++.+.+.+.
T Consensus       115 l~-~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~  158 (263)
T 2d5c_A          115 LK-G-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEE  158 (263)
T ss_dssp             CC-S-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             CC-C-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence            45 6 7888986 7799999999999999999999998766665544

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=97.00  E-value=0.0036  Score=38.14  Aligned_cols=43  Identities=16%  Similarity=0.226  Sum_probs=36.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      +. |+.++|.|.++-.|+.++..|...|+.|.++.+....++..
T Consensus       148 l~-Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~  190 (276)
T 3ngx_A          148 YH-ENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSM  190 (276)
T ss_dssp             CC-SCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHH
T ss_pred             cC-CCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHh
Confidence            45 89999999988899999999999999999998766555543

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.98  E-value=0.0023  Score=40.05  Aligned_cols=42  Identities=19%  Similarity=0.131  Sum_probs=35.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEV   46 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~   46 (85)
                      .++.+++|+| ++++|...++.....| ++|+++++++++.+.+
T Consensus       194 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~  236 (380)
T 1vj0_A          194 FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA  236 (380)
T ss_dssp             CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH
Confidence            3478999999 8999999999888899 5999999887665543

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.98  E-value=0.0022  Score=39.10  Aligned_cols=42  Identities=17%  Similarity=0.202  Sum_probs=35.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      .++.+++|.|+ +++|...++.....|++|++++ ++++.+.+.
T Consensus       141 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~  182 (315)
T 3goh_A          141 TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA  182 (315)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH
Confidence            35889999999 9999999988888899999998 776665543

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.97  E-value=0.0014  Score=39.56  Aligned_cols=43  Identities=33%  Similarity=0.400  Sum_probs=36.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +. ++.++|.|+ +++|++++..|...|++|.+++|+.++.+.+.
T Consensus       127 ~~-~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          127 VK-EKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             GG-GSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             cC-CCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            45 788999986 79999999999999999999999987665543

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.95  E-value=0.0012  Score=40.87  Aligned_cols=34  Identities=26%  Similarity=0.314  Sum_probs=28.6

Q ss_pred             CcE-EEEecCCC-----------------h-HHHHHHHHHHhCCCEEEEEecC
Q 034737            6 GLS-AFVTGGAS-----------------G-IGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         6 ~~~-~litG~~~-----------------g-ig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      |+. ++||+|+.                 | .|.++++.++.+|+.|+++.+.
T Consensus        36 gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~   88 (313)
T 1p9o_A           36 GRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   88 (313)
T ss_dssp             TCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence            555 88887664                 5 9999999999999999999874

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.95  E-value=0.0039  Score=38.88  Aligned_cols=41  Identities=22%  Similarity=0.368  Sum_probs=34.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|+| ++++|...++.....|+ +|+++++++++.+.+
T Consensus       191 ~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  232 (374)
T 2jhf_A          191 QGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKA  232 (374)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            478999999 48999999998888999 799999888776554

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.95  E-value=0.0039  Score=38.87  Aligned_cols=41  Identities=27%  Similarity=0.378  Sum_probs=34.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|+|+ +++|...++.....|+ +|+++++++++.+.+
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  233 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA  233 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            4789999995 8999999998888998 799999888776654

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.92  E-value=0.0051  Score=37.32  Aligned_cols=41  Identities=24%  Similarity=0.289  Sum_probs=34.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      +.+.|.|+ +.+|..++..|+..|++|++++++++..+...+
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   56 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   56 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            45777776 899999999999999999999999877666433

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.92  E-value=0.0042  Score=38.76  Aligned_cols=41  Identities=22%  Similarity=0.282  Sum_probs=34.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|+|+ +++|...++.....|+ +|+++++++++.+.+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  236 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA  236 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4789999995 8999999988888999 799999888766554

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.90  E-value=0.0042  Score=37.39  Aligned_cols=41  Identities=7%  Similarity=0.274  Sum_probs=35.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +.+.|.|++|.+|..+++.|...|++|++++|+++..+.+.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            36888998899999999999999999999999887665544

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.89  E-value=0.005  Score=38.43  Aligned_cols=40  Identities=15%  Similarity=0.106  Sum_probs=33.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      .++.+++|.|+++++|...++.....|++|+.+. ++++.+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~  202 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD  202 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH
Confidence            3478999999999999999999989999988775 555444

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.88  E-value=0.0042  Score=37.99  Aligned_cols=43  Identities=30%  Similarity=0.410  Sum_probs=36.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|.++-.|+.++..|+..|+.|.++.+....++.
T Consensus       158 ~l~-Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~  200 (286)
T 4a5o_A          158 DLY-GMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLAD  200 (286)
T ss_dssp             CCT-TCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred             CCC-CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHH
Confidence            356 9999999998889999999999999999998776554443

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.88  E-value=0.0012  Score=40.71  Aligned_cols=39  Identities=23%  Similarity=0.328  Sum_probs=33.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGN   44 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~   44 (85)
                      ++.+++|+|+ +++|...++.....|+ +|+++++++++.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~  203 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA  203 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            4789999999 9999999998888999 8999998865443

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.87  E-value=0.0054  Score=37.55  Aligned_cols=45  Identities=27%  Similarity=0.313  Sum_probs=37.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++. ++.++|.|.+.-+|+.++..|+..|+.|.++.+....+....
T Consensus       156 ~l~-gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~  200 (288)
T 1b0a_A          156 DTF-GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV  200 (288)
T ss_dssp             CCT-TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH
T ss_pred             CCC-CCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHh
Confidence            356 899999999888999999999999999999987776554443

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.86  E-value=0.004  Score=38.61  Aligned_cols=40  Identities=30%  Similarity=0.357  Sum_probs=33.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNE   45 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~   45 (85)
                      ++.+++|+|+ +++|...++.....|+ +|+++++++++.+.
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  211 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK  211 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            4789999996 8999999988888999 89999988765443

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.83  E-value=0.0047  Score=38.31  Aligned_cols=38  Identities=26%  Similarity=0.311  Sum_probs=31.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      .++.+++|.|+++++|...++.....|++++++.+..+
T Consensus       166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            35789999999999999988887778998877765543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.82  E-value=0.0062  Score=37.63  Aligned_cols=49  Identities=27%  Similarity=0.239  Sum_probs=37.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC--ccchHHHHHHHH
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS--EEKGNEVAALVE   51 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~--~~~~~~~~~~l~   51 (85)
                      |.+. .+.+.|.|+ +.+|..++..++..|. .|+++|++  ++..+....++.
T Consensus         4 m~~~-~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~   55 (315)
T 3tl2_A            4 MTIK-RKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDML   55 (315)
T ss_dssp             CCCC-CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHH
T ss_pred             cccC-CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHH
Confidence            5555 667888986 9999999999999998 99999998  444444444443

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=96.82  E-value=0.0048  Score=37.77  Aligned_cols=44  Identities=27%  Similarity=0.306  Sum_probs=34.1

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCC--EEEEEec--CccchHHHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGV--FVTVVDL--SEEKGNEVAALVE   51 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~--~v~~~~~--~~~~~~~~~~~l~   51 (85)
                      .++|+|++|++|.+++..|+.++.  .+.++|+  ++++++....++.
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~   49 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTN   49 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHH
Confidence            589999999999999999998875  6888888  6655554444443

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.81  E-value=0.0042  Score=38.69  Aligned_cols=42  Identities=26%  Similarity=0.347  Sum_probs=34.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVA   47 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~   47 (85)
                      ++.+++|+|+ +++|...++.....|+ +|+++++++++.+.+.
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~  232 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK  232 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            4789999995 8999999988888898 7999998887765543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.80  E-value=0.0046  Score=39.04  Aligned_cols=43  Identities=30%  Similarity=0.413  Sum_probs=35.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      +.++.+++|+|+ +++|...++.....|+ +|+++++++++.+.+
T Consensus       211 ~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~  254 (404)
T 3ip1_A          211 IRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA  254 (404)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            335789999997 8999999988888999 899998887665543

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.79  E-value=0.0039  Score=38.11  Aligned_cols=36  Identities=25%  Similarity=0.324  Sum_probs=31.6

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      .++.+++|+|+++++|...++.....|++|++++++
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~  186 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK  186 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc
Confidence            358899999999999999999999999999888743

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.78  E-value=0.0035  Score=37.90  Aligned_cols=44  Identities=23%  Similarity=0.372  Sum_probs=37.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l   50 (85)
                      ++.++|.|+ +|.+++++..|...|+ +|.++.|+.++.+.+.+.+
T Consensus       119 ~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          119 NAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            567888875 8999999999999997 7999999988887776655

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.78  E-value=0.0064  Score=38.67  Aligned_cols=40  Identities=25%  Similarity=0.205  Sum_probs=34.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      +++++|.|+ |.+|..+++.+...|++|+++++++...+.+
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          172 PAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            788999986 8999999999999999999999988765543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.76  E-value=0.0055  Score=37.74  Aligned_cols=42  Identities=24%  Similarity=0.337  Sum_probs=35.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++. |+.++|.|.++-.|+.++..|+..|+.|.++.+....++
T Consensus       162 ~l~-Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~  203 (300)
T 4a26_A          162 EMA-GKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED  203 (300)
T ss_dssp             CCT-TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH
T ss_pred             CCC-CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence            366 999999999888999999999999999999987554333

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.75  E-value=0.0062  Score=38.09  Aligned_cols=47  Identities=17%  Similarity=0.080  Sum_probs=38.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      ++.+.|+|+++.+|..++..++.+|.  .|+++|.++++++....++..
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~   56 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRH   56 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhh
Confidence            66899999999999999999999884  799999988777665555543

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=96.75  E-value=0.0055  Score=40.10  Aligned_cols=39  Identities=21%  Similarity=0.425  Sum_probs=34.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      |++++|.|. |.||..+++.+...|++|+++++++.+.+.
T Consensus       274 GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~  312 (494)
T 3ce6_A          274 GKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQ  312 (494)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             cCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            899999986 999999999999999999999998865443

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.75  E-value=0.005  Score=38.47  Aligned_cols=41  Identities=22%  Similarity=0.169  Sum_probs=34.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNE   45 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~   45 (85)
                      .++.+++|.|+ +++|...++.....|+ +|+++++++++.+.
T Consensus       181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  222 (370)
T 4ej6_A          181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL  222 (370)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            34789999997 8999999988888999 88888888765543

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.75  E-value=0.0029  Score=36.73  Aligned_cols=38  Identities=21%  Similarity=0.287  Sum_probs=32.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      +.+.|.| .|.+|..+++.|...|++|++++|+++..+.
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~   66 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR   66 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4577888 7999999999999999999999998765544

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=96.75  E-value=0.0061  Score=37.44  Aligned_cols=44  Identities=18%  Similarity=0.188  Sum_probs=33.3

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCC--EEEEEec--CccchHHHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGV--FVTVVDL--SEEKGNEVAALVE   51 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~--~v~~~~~--~~~~~~~~~~~l~   51 (85)
                      .++|||++|++|.+++..|+.++.  .+.++++  ++++++....++.
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~   49 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIY   49 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHH
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHH
Confidence            589999999999999999998874  5888888  6544444333443

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.75  E-value=0.003  Score=36.75  Aligned_cols=43  Identities=16%  Similarity=0.162  Sum_probs=35.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEE-EecCccchHHHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTV-VDLSEEKGNEVAALV   50 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~-~~~~~~~~~~~~~~l   50 (85)
                      +.+.|.| .+.+|.++++.|.+.|++|++ .+|++++.+.+.+.+
T Consensus        24 mkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~   67 (220)
T 4huj_A           24 TTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF   67 (220)
T ss_dssp             CCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh
Confidence            3577787 689999999999999999988 889988877766543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.74  E-value=0.0047  Score=37.79  Aligned_cols=42  Identities=21%  Similarity=0.222  Sum_probs=35.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++. |+.++|.|.++-.|+.++..|...|+.|.++.+....++
T Consensus       158 ~l~-Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~  199 (285)
T 3l07_A          158 KTE-GAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK  199 (285)
T ss_dssp             CCT-TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             CCC-CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            356 999999999888999999999999999988877654444

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.73  E-value=0.0044  Score=38.48  Aligned_cols=42  Identities=31%  Similarity=0.385  Sum_probs=34.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++.+++|+|+ +++|...++.....|++|+++++++++.+.+.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~  221 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEAL  221 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence            4789999985 99999999888888999999999877655443

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.73  E-value=0.0068  Score=38.20  Aligned_cols=40  Identities=18%  Similarity=0.142  Sum_probs=34.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      +++++|.|+ +.+|...++.+...|++|+++++++.+.+..
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          172 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            789999996 8999999999999999999999987665543

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.73  E-value=0.008  Score=40.23  Aligned_cols=60  Identities=23%  Similarity=0.254  Sum_probs=44.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPS   65 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~   65 (85)
                      ++.++|.|+ ||+|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++..+       
T Consensus       327 ~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~-------  398 (598)
T 3vh1_A          327 NTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMD-------  398 (598)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCE-------
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcE-------
Confidence            568888876 8999999999999997 68888654                   2467778888887766533       


Q ss_pred             eEEEEecC
Q 034737           66 AMFIRCDV   73 (85)
Q Consensus        66 ~~~~~~Dv   73 (85)
                      +..+..++
T Consensus       399 v~~~~~~I  406 (598)
T 3vh1_A          399 ATGVKLSI  406 (598)
T ss_dssp             EEEECCCC
T ss_pred             EEEEeccc
Confidence            55555444

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.72  E-value=0.0049  Score=37.96  Aligned_cols=43  Identities=21%  Similarity=0.197  Sum_probs=36.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ++.++|.|++.-+|+.++..|+..|+.|.++.+....+..
T Consensus       162 ~l~-gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~  204 (301)
T 1a4i_A          162 PIA-GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE  204 (301)
T ss_dssp             CCT-TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             CCC-CCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHH
Confidence            356 8999999998889999999999999999998776554443

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.71  E-value=0.0054  Score=38.20  Aligned_cols=41  Identities=22%  Similarity=0.280  Sum_probs=33.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|.|+ +++|...++.....|+ +|+++++++++.+.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  232 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA  232 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            4789999995 8999998888877898 799998888766554

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.70  E-value=0.0089  Score=37.45  Aligned_cols=35  Identities=29%  Similarity=0.464  Sum_probs=30.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      +++++|.|+ +.+|+.+++.+.+.|+++++++.++.
T Consensus        12 ~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~   46 (377)
T 3orq_A           12 GATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSED   46 (377)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            789999976 77999999999999999999987653

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.67  E-value=0.01  Score=37.14  Aligned_cols=50  Identities=24%  Similarity=0.405  Sum_probs=39.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc-------------------cchHHHHHHHHHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE-------------------EKGNEVAALVEKENAK   56 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~l~~~~~~   56 (85)
                      ++.++|.|+ +|+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+...++.
T Consensus       118 ~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~  187 (353)
T 3h5n_A          118 NAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSE  187 (353)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCC
Confidence            668889977 8999999999999986 688888752                   3566777777776654

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.65  E-value=0.01  Score=39.82  Aligned_cols=60  Identities=23%  Similarity=0.247  Sum_probs=45.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc-------------------cchHHHHHHHHHHhhhccCCCCCCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE-------------------EKGNEVAALVEKENAKFHSNLGFPS   65 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~~   65 (85)
                      +..++|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.++..+       
T Consensus       326 ~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~-------  397 (615)
T 4gsl_A          326 NTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMD-------  397 (615)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCE-------
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcE-------
Confidence            568899977 8999999999999997 688888753                   467778888887776633       


Q ss_pred             eEEEEecC
Q 034737           66 AMFIRCDV   73 (85)
Q Consensus        66 ~~~~~~Dv   73 (85)
                      +..+..++
T Consensus       398 v~~~~~~I  405 (615)
T 4gsl_A          398 ATGVKLSI  405 (615)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            55555444

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.63  E-value=0.004  Score=39.21  Aligned_cols=42  Identities=26%  Similarity=0.396  Sum_probs=34.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      .++.+++|.|+ +++|...++.....|+ +|+++++++++.+.+
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  226 (398)
T 2dph_A          184 KPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL  226 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            34789999996 9999988888777898 899999987665543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.62  E-value=0.0029  Score=39.53  Aligned_cols=41  Identities=20%  Similarity=0.293  Sum_probs=34.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|.|+ +++|...++.....|+ +|+++++++++.+.+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a  234 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA  234 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4788999997 9999999888888898 799999888765543

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.62  E-value=0.0025  Score=36.52  Aligned_cols=70  Identities=17%  Similarity=0.085  Sum_probs=43.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCC----CCCCceEEEEecCCCHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN----LGFPSAMFIRCDVTNTK   77 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~Dv~~~~   77 (85)
                      ++..++-.||+.|.   .+..|+++|++|+.+|.++..++.+.+...........+    ....++.++.+|+.+..
T Consensus        22 ~~~~vLD~GCG~G~---~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~   95 (203)
T 1pjz_A           22 PGARVLVPLCGKSQ---DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   95 (203)
T ss_dssp             TTCEEEETTTCCSH---HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CCCEEEEeCCCCcH---hHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCC
Confidence            36789999988873   355566679999999999977766654332100000000    00123889999988754

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.60  E-value=0.0095  Score=36.61  Aligned_cols=39  Identities=15%  Similarity=0.256  Sum_probs=33.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEV   46 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~   46 (85)
                      +.+.|.| .|.+|..+++.|...|+  +|++.+++++..+.+
T Consensus        34 ~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a   74 (314)
T 3ggo_A           34 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA   74 (314)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence            5678887 59999999999999999  999999998765554

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=96.60  E-value=0.0087  Score=38.64  Aligned_cols=38  Identities=24%  Similarity=0.333  Sum_probs=33.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      +. |++++|.|. |.||+.+++.+...|++|+++++++..
T Consensus       218 L~-GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~r  255 (435)
T 3gvp_A          218 FG-GKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPIC  255 (435)
T ss_dssp             CT-TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ec-CCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            56 899999987 679999999999999999999988743

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.60  E-value=0.0087  Score=37.64  Aligned_cols=38  Identities=32%  Similarity=0.462  Sum_probs=33.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      ++. ||++.|.|. +.+|..+++.+...|++|++.|.++.
T Consensus       172 ~L~-GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~  209 (355)
T 1c1d_A          172 SLD-GLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTE  209 (355)
T ss_dssp             CST-TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCC-CCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            466 899999975 89999999999999999998888754

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.60  E-value=0.0085  Score=38.95  Aligned_cols=39  Identities=28%  Similarity=0.393  Sum_probs=34.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      .+. ||+++|.|. |.||+.+++.+...|++|+++++++..
T Consensus       244 ~L~-GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~  282 (464)
T 3n58_A          244 MMA-GKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPIC  282 (464)
T ss_dssp             CCT-TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             ccc-CCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence            356 999999986 679999999999999999999887743

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=96.59  E-value=0.0075  Score=37.28  Aligned_cols=36  Identities=22%  Similarity=0.461  Sum_probs=31.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCcc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEE   41 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~   41 (85)
                      .+.++|+|++|.+|..++..|+.+|  ..|++++++++
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~   45 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA   45 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence            3579999999999999999999988  68989998775

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=96.59  E-value=0.007  Score=39.44  Aligned_cols=42  Identities=21%  Similarity=0.261  Sum_probs=34.6

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      .+.|.|+ +.+|..++..|+..|+.|++.+++++.++...+.+
T Consensus         7 kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i   48 (483)
T 3mog_A            7 TVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGI   48 (483)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Confidence            4445555 89999999999999999999999998877766544

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.58  E-value=0.011  Score=36.59  Aligned_cols=44  Identities=16%  Similarity=0.102  Sum_probs=36.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~   51 (85)
                      +.+.|.|+ |.+|.+++..|+..|. +|++.|++++.++.....+.
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~   54 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLS   54 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHH
Confidence            46888887 9999999999999997 99999999887776444443

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.57  E-value=0.0092  Score=37.05  Aligned_cols=50  Identities=20%  Similarity=0.287  Sum_probs=39.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHH
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      |... .+.+.|.|+ +.+|.+++..|+..|.  .|+++|+++++++....++..
T Consensus         1 m~~~-~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~   52 (326)
T 3pqe_A            1 MNKH-VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNH   52 (326)
T ss_dssp             -CCS-CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCCC-CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHh
Confidence            4334 567889995 9999999999999886  899999998877776666654

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=96.57  E-value=0.011  Score=38.00  Aligned_cols=35  Identities=29%  Similarity=0.440  Sum_probs=30.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEE-EEec
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVT-VVDL   38 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~-~~~~   38 (85)
                      ++. +++++|+| .+..|..+++.|.+.|++|+ +.|+
T Consensus       215 ~l~-gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          215 DLR-GARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             CCT-TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             Ccc-CCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            466 89999997 68889999999999999988 6677

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.57  E-value=0.0028  Score=39.74  Aligned_cols=41  Identities=24%  Similarity=0.333  Sum_probs=33.8

Q ss_pred             CcEEEEec-CCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            6 GLSAFVTG-GASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         6 ~~~~litG-~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      +.+++|.| +++++|...++.....|++|+++++++++.+.+
T Consensus       171 g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~  212 (379)
T 3iup_A          171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLL  212 (379)
T ss_dssp             TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHH
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            66788886 899999999888888899999999887665544

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.56  E-value=0.0056  Score=36.48  Aligned_cols=69  Identities=20%  Similarity=0.110  Sum_probs=43.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhc---cCC------CCCCceEEEEecCCCH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKF---HSN------LGFPSAMFIRCDVTNT   76 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~---~~~------~~~~~~~~~~~Dv~~~   76 (85)
                      +..++-.||+.|.   .+..|+++|++|+.+|.++...+.+.+.....+...   ...      ....++.++.+|+.+.
T Consensus        69 ~~~vLD~GCG~G~---~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l  145 (252)
T 2gb4_A           69 GLRVFFPLCGKAI---EMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL  145 (252)
T ss_dssp             SCEEEETTCTTCT---HHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred             CCeEEEeCCCCcH---HHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence            6789999998874   466788889999999999877666543321000000   000      0123488899998764


Q ss_pred             H
Q 034737           77 K   77 (85)
Q Consensus        77 ~   77 (85)
                      .
T Consensus       146 ~  146 (252)
T 2gb4_A          146 P  146 (252)
T ss_dssp             G
T ss_pred             C
Confidence            3

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.56  E-value=0.0065  Score=37.67  Aligned_cols=39  Identities=21%  Similarity=0.258  Sum_probs=32.3

Q ss_pred             cEEEEecCCChHHHHH-HHHH-HhCCCE-EEEEecCcc---chHHH
Q 034737            7 LSAFVTGGASGIGRAL-SLAL-AGKGVF-VTVVDLSEE---KGNEV   46 (85)
Q Consensus         7 ~~~litG~~~gig~~~-~~~l-~~~g~~-v~~~~~~~~---~~~~~   46 (85)
                      .+++|+|+ +++|... ++.. ...|++ |++++++++   +.+.+
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~  218 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII  218 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH
Confidence            89999999 9999998 7776 678987 999999876   55544

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=96.55  E-value=0.0084  Score=36.12  Aligned_cols=39  Identities=21%  Similarity=0.293  Sum_probs=33.0

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      .+.|.|+ |.+|..++..|.+.|++|++++|+++..+.+.
T Consensus         5 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~   43 (316)
T 2ew2_A            5 KIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIR   43 (316)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             eEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence            5777775 89999999999999999999999987665544

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.55  E-value=0.0089  Score=37.55  Aligned_cols=42  Identities=26%  Similarity=0.369  Sum_probs=33.9

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      .++.+++|.|+ +++|...++.....|+ +|+++++++++.+.+
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a  226 (398)
T 1kol_A          184 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA  226 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH
Confidence            34789999995 9999998888888898 688888887665544

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=96.54  E-value=0.0077  Score=36.05  Aligned_cols=64  Identities=14%  Similarity=0.185  Sum_probs=44.6

Q ss_pred             CCcEEEEecCCCh-HHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            5 PGLSAFVTGGASG-IGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         5 ~~~~~litG~~~g-ig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      ++..++=.||+.| +...+++++...|++|+.+|.++.-++.+.+.+...+..       .++.++..|+.+
T Consensus        70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~-------~~v~~~~~D~~~  134 (261)
T 4gek_A           70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP-------TPVDVIEGDIRD  134 (261)
T ss_dssp             TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS-------SCEEEEESCTTT
T ss_pred             CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC-------ceEEEeeccccc
Confidence            4778899998766 445666666667889999999998777777666543322       126777777654

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.54  E-value=0.006  Score=37.08  Aligned_cols=41  Identities=15%  Similarity=0.161  Sum_probs=33.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      +.+.|.| .+.+|..++..|.+.|++|++.+|++++.+.+.+
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   48 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLA   48 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            3466665 4899999999999999999999999877666543

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.52  E-value=0.0039  Score=37.34  Aligned_cols=39  Identities=31%  Similarity=0.403  Sum_probs=33.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      + .++|.|+ +|.|++++..|...|+ +|.+++|+.++++.+
T Consensus       109 ~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          109 E-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             S-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             C-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            6 7888876 8999999999999998 899999997665543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.50  E-value=0.0056  Score=37.14  Aligned_cols=40  Identities=20%  Similarity=0.125  Sum_probs=33.1

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      .+.|.| .+.+|..+++.|.+.|++|++.+|++++.+.+.+
T Consensus        17 ~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~   56 (296)
T 3qha_A           17 KLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE   56 (296)
T ss_dssp             CEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH
T ss_pred             eEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            455666 4889999999999999999999999887766543

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.50  E-value=0.029  Score=35.77  Aligned_cols=36  Identities=31%  Similarity=0.454  Sum_probs=30.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      ++++++|.|+ +.+|+.+++.+.+.|++|++++.++.
T Consensus        34 ~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~   69 (419)
T 4e4t_A           34 PGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPA   69 (419)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCc
Confidence            4889999976 67999999999999999999886643

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.48  E-value=0.017  Score=35.82  Aligned_cols=46  Identities=17%  Similarity=0.132  Sum_probs=37.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      .+.+.|.|+ +.+|.+++..|+..|. .|+++|+++++++....++..
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~   53 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAE   53 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhc
Confidence            456888887 9999999999999988 999999999877655555543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.46  E-value=0.0078  Score=37.47  Aligned_cols=41  Identities=24%  Similarity=0.286  Sum_probs=33.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|+|+ +++|...++.....|+ +|+++++++++.+.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a  231 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA  231 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            4789999985 8999998888777898 688898887665544

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.42  E-value=0.011  Score=37.55  Aligned_cols=41  Identities=24%  Similarity=0.134  Sum_probs=35.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +.+++|.|+ +.+|...++.+...|++|+++++++.+++.+.
T Consensus       184 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  224 (381)
T 3p2y_A          184 PASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR  224 (381)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            678999988 79999999999999999999999987665554

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=96.42  E-value=0.0082  Score=37.59  Aligned_cols=41  Identities=29%  Similarity=0.364  Sum_probs=33.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      +.+.|.|+ +.+|.+++..|++.|++|.+.+|+++..+.+.+
T Consensus        30 mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~   70 (356)
T 3k96_A           30 HPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQA   70 (356)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHH
T ss_pred             CeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            45777765 899999999999999999999999876655443

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.41  E-value=0.0066  Score=37.53  Aligned_cols=42  Identities=17%  Similarity=0.067  Sum_probs=33.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      .++.+++|.|+ +++|...++.....|+ +|+++++++++.+.+
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  207 (352)
T 3fpc_A          165 KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA  207 (352)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH
Confidence            34788999985 8999999988888998 799998887655433

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.41  E-value=0.012  Score=36.19  Aligned_cols=41  Identities=27%  Similarity=0.220  Sum_probs=34.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      +.+.|.|+ +.+|..++..|...|++|.+++|+++..+...+
T Consensus         5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~   45 (359)
T 1bg6_A            5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   45 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHh
Confidence            46777776 899999999999999999999999876665543

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.40  E-value=0.014  Score=37.74  Aligned_cols=39  Identities=28%  Similarity=0.405  Sum_probs=34.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      .+. |+++.|.|. |.||+.+++.|...|++|+++++++..
T Consensus       208 ~L~-GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~  246 (436)
T 3h9u_A          208 MIA-GKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPIN  246 (436)
T ss_dssp             CCT-TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ccc-CCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhh
Confidence            356 899999985 889999999999999999999998744

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.39  E-value=0.017  Score=34.77  Aligned_cols=40  Identities=33%  Similarity=0.301  Sum_probs=33.6

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      .+.|.|+ +.+|..++..|...|++|++.+|++++.+.+.+
T Consensus         3 ~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   42 (287)
T 3pef_A            3 KFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA   42 (287)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            4666665 899999999999999999999999887776543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.38  E-value=0.0096  Score=36.68  Aligned_cols=41  Identities=29%  Similarity=0.379  Sum_probs=32.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|.|+ +++|...++..... +++|+++++++++.+.+
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~  212 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA  212 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            4789999997 99999887776665 78999999987665543

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.36  E-value=0.011  Score=36.65  Aligned_cols=40  Identities=20%  Similarity=0.154  Sum_probs=34.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      +. ++++.|.|. |.||..+++.|...|++|++.+++.+..+
T Consensus       153 l~-g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~  192 (330)
T 2gcg_A          153 LT-QSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPE  192 (330)
T ss_dssp             CT-TCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHH
T ss_pred             CC-CCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchh
Confidence            55 788989976 99999999999999999999998765433

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=96.34  E-value=0.0058  Score=40.13  Aligned_cols=61  Identities=15%  Similarity=0.059  Sum_probs=47.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      .++++|.|. +-.|+.+++.|...|..+++++.+++..+.+.+.+     .         +.++.+|.++++. +++
T Consensus       127 ~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~-----~---------~~~i~Gd~~~~~~L~~a  188 (565)
T 4gx0_A          127 RGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQE-----G---------FKVVYGSPTDAHVLAGL  188 (565)
T ss_dssp             CSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSC-----S---------SEEEESCTTCHHHHHHT
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----C---------CeEEEeCCCCHHHHHhc
Confidence            357888877 67899999999999999999999987655543321     2         6788899988877 553

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.33  E-value=0.019  Score=35.21  Aligned_cols=39  Identities=18%  Similarity=0.233  Sum_probs=33.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      +.+.|.|+ |.+|..++..|+..|. +|++.+++++.++..
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~   44 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK   44 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence            46788887 8999999999999998 999999998776654

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.32  E-value=0.014  Score=34.52  Aligned_cols=36  Identities=31%  Similarity=0.384  Sum_probs=31.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      ++.+.|.| .+.+|.++++.|.+.|++|++.+|++++
T Consensus        19 ~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           19 GMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            56677775 6999999999999999999999998765

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.32  E-value=0.021  Score=36.91  Aligned_cols=58  Identities=16%  Similarity=0.327  Sum_probs=46.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      -+.++|.|| +.+|..+++.|- ..++|.++..+.++++.+.+++.    +         ..++.+|-+|++-
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L~-~~~~v~iIE~d~~r~~~la~~l~----~---------~~Vi~GD~td~~~  292 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRLE-QTYSVKLIERNLQRAEKLSEELE----N---------TIVFCGDAADQEL  292 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHCT----T---------SEEEESCTTCHHH
T ss_pred             ccEEEEEcc-hHHHHHHHHHhh-hcCceEEEecCHHHHHHHHHHCC----C---------ceEEeccccchhh
Confidence            357888876 779999999874 56899999999988888877662    2         6788999999875

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.31  E-value=0.024  Score=34.98  Aligned_cols=45  Identities=16%  Similarity=0.178  Sum_probs=36.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~   51 (85)
                      .+.+.|.|+ |.+|..++..|+..|. +|+++|+++++++.....+.
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~   49 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTS   49 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH
Confidence            346788887 9999999999999998 89999999887776555544

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=96.24  E-value=0.018  Score=35.67  Aligned_cols=44  Identities=16%  Similarity=0.281  Sum_probs=35.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      +.+.|.|+ |-+|..++..++..|++|++.|.+++.++...+.+.
T Consensus         7 ~~VaViGa-G~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   50 (319)
T 3ado_A            7 GDVLIVGS-GLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIR   50 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHH
T ss_pred             CeEEEECC-cHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHH
Confidence            34666665 889999999999999999999999877666555443

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.24  E-value=0.012  Score=36.00  Aligned_cols=43  Identities=23%  Similarity=0.343  Sum_probs=36.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~   45 (85)
                      ++. |+.++|.|.+.-+|+.++..|+..  |+.|.++.+....+..
T Consensus       155 ~l~-gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~~  199 (281)
T 2c2x_A          155 SIA-GAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPA  199 (281)
T ss_dssp             CCT-TCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHHH
T ss_pred             CCC-CCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHHH
Confidence            466 999999999888899999999999  8999998777654443

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.23  E-value=0.013  Score=33.89  Aligned_cols=34  Identities=21%  Similarity=0.303  Sum_probs=28.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .+.+.|.| .+.+|.+++..|.+.|++|++.+|++
T Consensus        19 ~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           19 GMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            56788887 68999999999999999999888764

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.16  E-value=0.033  Score=34.47  Aligned_cols=43  Identities=23%  Similarity=0.241  Sum_probs=35.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l   50 (85)
                      +.+.|.|+ |.+|..++..|+..|. +|++.|++++.++.....+
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l   58 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDL   58 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH
Confidence            46788887 9999999999999998 9999999988777544333

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.15  E-value=0.014  Score=36.62  Aligned_cols=41  Identities=17%  Similarity=0.181  Sum_probs=34.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      .+.+.|.| .+.+|..+++.|.+.|+.|++.+|++++.+.+.
T Consensus        22 ~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~   62 (358)
T 4e21_A           22 SMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALE   62 (358)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            45677776 489999999999999999999999987665543

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.15  E-value=0.0073  Score=35.63  Aligned_cols=37  Identities=32%  Similarity=0.428  Sum_probs=32.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++. ++.++|.|+ |.+|...++.|++.|++|++++...
T Consensus        28 ~L~-gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~   64 (223)
T 3dfz_A           28 DLK-GRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTV   64 (223)
T ss_dssp             CCT-TCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred             EcC-CCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence            467 899999987 6889999999999999999987654

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.13  E-value=0.019  Score=34.25  Aligned_cols=38  Identities=21%  Similarity=0.240  Sum_probs=31.9

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      .+.|.| .+.+|..+++.|...|++|++++++++..+..
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~   39 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKA   39 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            466777 58999999999999999999999988766554

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.13  E-value=0.03  Score=34.98  Aligned_cols=40  Identities=15%  Similarity=0.209  Sum_probs=34.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHH-hCCCEEEEEecCccchH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALA-GKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~-~~g~~v~~~~~~~~~~~   44 (85)
                      +. ++++.|.|. |.||+.+++.+. ..|++|++.+++....+
T Consensus       161 l~-g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~  201 (348)
T 2w2k_A          161 PR-GHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDVAPADAE  201 (348)
T ss_dssp             ST-TCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSCCCHH
T ss_pred             CC-CCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECCCCcchh
Confidence            56 888888875 999999999999 99999999998875433

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.12  E-value=0.028  Score=34.47  Aligned_cols=38  Identities=18%  Similarity=0.210  Sum_probs=33.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      +. ++++.|.|. |.||+.+++.+...|++|++.+++.+.
T Consensus       140 l~-g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~  177 (307)
T 1wwk_A          140 LE-GKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE  177 (307)
T ss_dssp             CT-TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             cC-CceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            55 888888876 999999999999999999999988754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	85
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	4e-14
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	1e-13
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	3e-13
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-13
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-12
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-12
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-12
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-12
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-12
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-12
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-12
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	4e-12
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	6e-12
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	6e-12
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	8e-12
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-11
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-11
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-11
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-11
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	1e-11
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-11
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-11
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-11
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-11
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-11
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	4e-11
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	4e-11
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-11
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	8e-11
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	8e-11
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	9e-11
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-10
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-10
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-10
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-10
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-10
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-10
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	4e-10
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	5e-10
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	5e-10
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	9e-10
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	9e-10
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-09
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-09
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	1e-09
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-09
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-09
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-09
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-09
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-09
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-09
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-09
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	6e-09
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-08
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-08
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-08
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-08
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-08
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-08
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-08
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	5e-08
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	8e-08
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	9e-08
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	1e-07
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	3e-07
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	3e-07
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	5e-07
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-07
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	6e-07
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-06
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	2e-06
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-06
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-06
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	4e-06
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-06
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	6e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	7e-06
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	9e-06
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	1e-05
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	1e-05
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	2e-05
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-05
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-05
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-05
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-05
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	5e-05
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-04
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	3e-04
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	3e-04
d1e5qa1	182	c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase	7e-04
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	8e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.001
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.002

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 62.4 bits (151), Expect = 4e-14
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 10/75 (13%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          + L  G  A +TG  +GIG+ +++  A  G  V V D++ +  N V   +++   +    
Sbjct: 7  LRLD-GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---- 61

Query: 61 LGFPSAMFIRCDVTN 75
               A   RCD+T+
Sbjct: 62 -----AFACRCDITS 71

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 61.4 bits (148), Expect = 1e-13
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG   GIG+A++L L   G  V + D ++     VA+ + +             A+ 
Sbjct: 4  ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH---------AVA 54

Query: 69 IRCDVTN 75
          ++ DV++
Sbjct: 55 VKVDVSD 61

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 60.6 bits (146), Expect = 3e-13
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTG    IG A +L LA +G  + ++D++ E   +  A V ++  +         A  
Sbjct: 8  CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE---------ARS 58

Query: 69 IRCDVTN 75
            CDVT+
Sbjct: 59 YVCDVTS 65

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 9e-13
 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG A GIGRA + AL  KG  V +VD + E G +  A + ++             +F
Sbjct: 6  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEP-------QKTLF 58

Query: 69 IRCDVTN 75
          I+CDV +
Sbjct: 59 IQCDVAD 65

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 58.9 bits (142), Expect = 1e-12
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG   GIGR ++  LA     V  +  +++  + V   ++    +         +  
Sbjct: 13 ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE---------SSG 63

Query: 69 IRCDVTN 75
             DV+ 
Sbjct: 64 YAGDVSK 70

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 58.6 bits (141), Expect = 1e-12
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG  SGIG  ++  L  +G+ V V    EE        + +   +         A  
Sbjct: 5  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE---------ADG 55

Query: 69 IRCDVTN 75
            CDV +
Sbjct: 56 RTCDVRS 62

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 58.7 bits (141), Expect = 1e-12
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 13/75 (17%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M L  G +A +TG A GIGRA + A   +G  V + D++ E     AA            
Sbjct: 1  MRLD-GKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAA-----------E 48

Query: 61 LGFPSAMFIRCDVTN 75
          +G P+A  I  DVT+
Sbjct: 49 IG-PAACAIALDVTD 62

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 58.2 bits (140), Expect = 2e-12
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 9/84 (10%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          +      +  VTGG  GIG A + A+A  G  V V+  S     EV   V KE       
Sbjct: 5  ISFV-NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG----- 58

Query: 61 LGFPSAMFIRCDVTNTKFALAFLR 84
                   +CDV+NT      ++
Sbjct: 59 ---VKTKAYQCDVSNTDIVTKTIQ 79

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 2e-12
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGGA+GIG+A+   L   G  V +     E+    A  ++               + 
Sbjct: 15 AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQ----ARVIP 70

Query: 69 IRCDVTN 75
          I+C++ N
Sbjct: 71 IQCNIRN 77

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 58.1 bits (140), Expect = 2e-12
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TG ++GIGR  ++  A +G  VT+   S E+  E   ++ K                
Sbjct: 8  VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS------EKQVNS 61

Query: 69 IRCDVTN 75
          +  DVT 
Sbjct: 62 VVADVTT 68

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 57.4 bits (138), Expect = 4e-12
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 7/67 (10%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TGG SG+GRA ++ LA +G  +++VD+S E      A V +              + 
Sbjct: 7  VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAE-------VLT 59

Query: 69 IRCDVTN 75
             DV++
Sbjct: 60 TVADVSD 66

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 57.4 bits (138), Expect = 4e-12
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 6/70 (8%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G S  +TG ++GIGR+ ++  A +G  VT+   +E++  E    + K             
Sbjct: 4  GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAE------K 57

Query: 66 AMFIRCDVTN 75
             +  DVT 
Sbjct: 58 INAVVADVTE 67

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 57.0 bits (137), Expect = 6e-12
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 10/67 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TGGA GIG   +      G  V + D++++ G +V   +   +             F
Sbjct: 9  AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV----------ISF 58

Query: 69 IRCDVTN 75
          + CDVT 
Sbjct: 59 VHCDVTK 65

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 56.6 bits (136), Expect = 6e-12
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTGG  GIG A+    AG G  +     +E + NE  +  +K+  +            
Sbjct: 11 VLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ---------VTG 61

Query: 69 IRCDVTN 75
            CD + 
Sbjct: 62 SVCDASL 68

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 8e-12
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 8/67 (11%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          AF+TGG +G+G+ ++  L+  G    +     +     A  +  +               
Sbjct: 28 AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--------NKVHA 79

Query: 69 IRCDVTN 75
          I+CDV +
Sbjct: 80 IQCDVRD 86

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 56.2 bits (135), Expect = 1e-11
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA-LVEKENAKFHSNLGFPSAM 67
          A VTGG+ G+G  ++  LA  G  V V   + E+ +E A  L EK   +          M
Sbjct: 8  ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE---------TM 58

Query: 68 FIRCDVTN 75
            RCDV+N
Sbjct: 59 AFRCDVSN 66

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (135), Expect = 1e-11
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG + GIG A++ AL  +G+ V     +     E+AA  +             + + 
Sbjct: 13 ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP-------GTLIP 65

Query: 69 IRCDVTN 75
           RCD++N
Sbjct: 66 YRCDLSN 72

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 1e-11
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 9/74 (12%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TG   GIGR  +   A     + + D+++    E AA  +   AK H          
Sbjct: 10 VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVH---------T 60

Query: 69 IRCDVTNTKFALAF 82
             D +N +   + 
Sbjct: 61 FVVDCSNREDIYSS 74

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 55.9 bits (134), Expect = 1e-11
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 9/70 (12%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G +A VTGG+ GIG A+   LAG G  V     +E++ +E   +  ++            
Sbjct: 6  GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVE------- 58

Query: 66 AMFIRCDVTN 75
               CD+ +
Sbjct: 59 --GSVCDLLS 66

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 55.5 bits (133), Expect = 1e-11
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A V+GGA G+G +   A+  +G  V   D+ +E+G  +AA +               A +
Sbjct: 9  ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA------------ARY 56

Query: 69 IRCDVTN 75
          +  DVT 
Sbjct: 57 VHLDVTQ 63

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (133), Expect = 2e-11
 Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 13/67 (19%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            VTGG  GIG  +  A    G  V + D  E  G  +                 P A+F
Sbjct: 9  VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE-------------LPGAVF 55

Query: 69 IRCDVTN 75
          I CDVT 
Sbjct: 56 ILCDVTQ 62

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 55.0 bits (132), Expect = 2e-11
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG ++GIGRA ++  A +G  VT+     E+  E    +              +   
Sbjct: 8  AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQ------NVNS 61

Query: 69 IRCDVTN 75
          +  DVT 
Sbjct: 62 VVADVTT 68

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 54.8 bits (131), Expect = 2e-11
 Identities = 17/63 (26%), Positives = 28/63 (44%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG + GIGRA++  LA +G  V     SE     ++  +         N+  P+++ 
Sbjct: 7  ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIE 66

Query: 69 IRC 71
             
Sbjct: 67 SVL 69

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 54.7 bits (131), Expect = 3e-11
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 12/70 (17%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G +  VTG ASGIGRA     A +G  +  VD  E    E  A +E E            
Sbjct: 5  GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE------------ 52

Query: 66 AMFIRCDVTN 75
          A+ +  DV++
Sbjct: 53 AIAVVADVSD 62

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 54.6 bits (131), Expect = 3e-11
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 9/67 (13%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGG+ GIG  +   LA  G  V     ++++ N+       +  K            
Sbjct: 11 ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE---------A 61

Query: 69 IRCDVTN 75
            CD+++
Sbjct: 62 SVCDLSS 68

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 54.6 bits (131), Expect = 4e-11
 Identities = 13/67 (19%), Positives = 22/67 (32%), Gaps = 15/67 (22%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VT      G   +L L+  G  V   D S ++ +E+ A  E                +
Sbjct: 3  AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET---------------Y 47

Query: 69 IRCDVTN 75
           +    +
Sbjct: 48 PQLKPMS 54

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 54.4 bits (130), Expect = 4e-11
 Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 11/76 (14%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHS 59
           +L+ G    +TG ++G+G+++++  A +   V V   S E++ N V   ++K   +   
Sbjct: 3  KDLE-GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE--- 58

Query: 60 NLGFPSAMFIRCDVTN 75
                A+ ++ DVT 
Sbjct: 59 ------AIAVKGDVTV 68

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 53.5 bits (128), Expect = 7e-11
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 15/75 (20%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M LK   +  +TG A GIGRA     A +G  +   D+ E    E A  V          
Sbjct: 1  MRLK-DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---------- 49

Query: 61 LGFPSAMFIRCDVTN 75
               A  +  DV +
Sbjct: 50 ----GAHPVVMDVAD 60

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 53.5 bits (128), Expect = 8e-11
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 12/70 (17%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G +  +TGGA G+G   +      G  V + D+ +E+G   A             LG  +
Sbjct: 5  GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR-----------ELG-DA 52

Query: 66 AMFIRCDVTN 75
          A +   DVT 
Sbjct: 53 ARYQHLDVTI 62

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 53.5 bits (128), Expect = 8e-11
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 10/67 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TGG  GIG A++     +G  V +     + G + A  V   +             F
Sbjct: 9  AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQ----------IQF 58

Query: 69 IRCDVTN 75
           + D ++
Sbjct: 59 FQHDSSD 65

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.6 bits (128), Expect = 9e-11
 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 10/70 (14%)

Query: 9  AFVTGGASGIGRALSLALA---GKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
            +TG + G GRAL+  LA     G  + V   SE    ++   +  +            
Sbjct: 9  CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK------- 61

Query: 66 AMFIRCDVTN 75
           +    D+  
Sbjct: 62 VVLAAADLGT 71

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 53.2 bits (127), Expect = 1e-10
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG   GIGR +++ L  +G  V V    S E   EV A ++K  +          A 
Sbjct: 21 ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD---------AA 71

Query: 68 FIRCDVTN 75
           ++ +V  
Sbjct: 72 CVKANVGV 79

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 53.3 bits (127), Expect = 1e-10
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG  SGIG  ++ ALA +G  + +    +      AA +EK  A   +  G    ++
Sbjct: 7  AVVTGSTSGIGLGIATALAAQGADIVLNGFGD------AAEIEKVRAGLAAQHG-VKVLY 59

Query: 69 IRCDVTN 75
             D++ 
Sbjct: 60 DGADLSK 66

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 53.1 bits (127), Expect = 1e-10
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 12/67 (17%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTGGASG+G  +   L G+G  V   D++E  G ++AA + +             +MF
Sbjct: 9  ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER------------SMF 56

Query: 69 IRCDVTN 75
          +R DV++
Sbjct: 57 VRHDVSS 63

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 52.6 bits (126), Expect = 2e-10
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 11/67 (16%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TGGA+GIGRA++   A +G  + + DL      E  A +     +          + 
Sbjct: 8  AVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRR---------VLT 56

Query: 69 IRCDVTN 75
          ++CDV+ 
Sbjct: 57 VKCDVSQ 63

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 2e-10
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
          GL A +TGGASG+G A +  L G+G    ++DL    G   A 
Sbjct: 5  GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK 47

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 52.7 bits (126), Expect = 2e-10
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 13/75 (17%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M+LK G +  +TGGASG+GRAL      +G  V V+D S E+  E+             +
Sbjct: 1  MKLK-GEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELET-----------D 48

Query: 61 LGFPSAMFIRCDVTN 75
           G  + + I  DV +
Sbjct: 49 HG-DNVLGIVGDVRS 62

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 51.7 bits (123), Expect = 4e-10
 Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 3/50 (6%)

Query: 4  KPGLS---AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV 50
          KP        VTGG  GIG A++  LA  G  V V          +  + 
Sbjct: 2  KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVE 51

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.5 bits (123), Expect = 5e-10
 Identities = 18/75 (24%), Positives = 24/75 (32%), Gaps = 14/75 (18%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          +    GL A VTG   GIGR    AL   G  V  V  +      +A             
Sbjct: 1  LNFS-GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK------------ 47

Query: 61 LGFPSAMFIRCDVTN 75
             P    +  D+ +
Sbjct: 48 -ECPGIEPVCVDLGD 61

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 51.3 bits (122), Expect = 5e-10
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 12/75 (16%)

Query: 4  KP--GLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSN 60
          KP  G  A  TG   GIGR +++ L  +G  V V    S +   EV A ++K  A+    
Sbjct: 2  KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ---- 57

Query: 61 LGFPSAMFIRCDVTN 75
                + I+ D++ 
Sbjct: 58 -----GVAIQADISK 67

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 50.6 bits (120), Expect = 9e-10
 Identities = 20/40 (50%), Positives = 26/40 (65%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
          A VTGGASG+GRA +LAL  +G  V V+DL  E  + +  
Sbjct: 4  ALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYV 43

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 50.8 bits (121), Expect = 9e-10
 Identities = 15/75 (20%), Positives = 22/75 (29%), Gaps = 9/75 (12%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          M+L    +        GIG   S  L  + +   V+    E    +A L           
Sbjct: 1  MDLT-NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPK----- 54

Query: 61 LGFPSAMFIRCDVTN 75
              +  F   DVT 
Sbjct: 55 ---VNITFHTYDVTV 66

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 1e-09
 Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 14/75 (18%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          + L  G    VTG   GIGR    AL   G  V  V  ++   + +              
Sbjct: 3  LFLA-GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----------- 50

Query: 61 LGFPSAMFIRCDVTN 75
             P    +  D+ +
Sbjct: 51 --CPGIEPVCVDLGD 63

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 1e-09
 Identities = 17/51 (33%), Positives = 24/51 (47%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAK 56
          G    VTG + GIGR ++  LA  G  V V   S+E   +V +   +  A 
Sbjct: 14 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 64

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 1e-09
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
            +T  A GIG+A +LA A +G  V   D++E K  E+  
Sbjct: 9  IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK 48

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 49.6 bits (117), Expect = 2e-09
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 1/71 (1%)

Query: 4  KPGLSAFVTGGASGIGRALSLALAGKGVFVTV-VDLSEEKGNEVAALVEKENAKFHSNLG 62
          KP  +  VTGG  G+G  ++  LA +G    + V  S    +    LV +  A       
Sbjct: 7  KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTV 66

Query: 63 FPSAMFIRCDV 73
              +  R  V
Sbjct: 67 AACDVTDRESV 77

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 49.4 bits (117), Expect = 3e-09
 Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 16/74 (21%)

Query: 9  AFVTGGASGIGRALSLALAGKG-------VFVTVVDLSEEKGNEVAALVEKENAKFHSNL 61
            +TG   GIGRA++L  A            + +   +     +++     E A      
Sbjct: 4  LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL----- 58

Query: 62 GFPSAMFIRCDVTN 75
                 I  D+++
Sbjct: 59 ----TDTITADISD 68

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 49.1 bits (116), Expect = 4e-09
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TGGA  IG ++++ L  +G  V V     E   +   LV + NA         SA+ 
Sbjct: 4  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQ--RLVAELNAA-----RAGSAVL 56

Query: 69 IRCDVTN 75
           + D++ 
Sbjct: 57 CKGDLSL 63

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 49.1 bits (117), Expect = 4e-09
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 15/78 (19%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          G    VTGGA GIGRA++ A A +G  V + DL  E      A+                
Sbjct: 5  GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI---------------G 49

Query: 66 AMFIRCDVTNTKFALAFL 83
            F + D+ + +  + F+
Sbjct: 50 GAFFQVDLEDERERVRFV 67

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 48.9 bits (116), Expect = 4e-09
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
            VTG + GIG+A++L+L   G  V V    S +   EV+  +E    +         A+
Sbjct: 4  VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ---------AI 54

Query: 68 FIRCDVTN 75
              DV+ 
Sbjct: 55 TFGGDVSK 62

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 48.5 bits (115), Expect = 5e-09
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
            V   + GIGRA++  L+ +G  VT+   +EE       
Sbjct: 7  VLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH 46

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 48.5 bits (114), Expect = 6e-09
 Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAM 67
          A VTG A  +GR+++  L  +G  V +    S  + N ++A +          +    + 
Sbjct: 5  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 68 FIRCDVTNTKFAL 80
               V+    + 
Sbjct: 65 VATAPVSGADGSA 77

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 6e-09
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
            +TG +SGIG  L++ LA        V  +         L E   A         S   
Sbjct: 5  VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPP---GSLET 61

Query: 69 IRCDVTNTK 77
          ++ DV ++K
Sbjct: 62 LQLDVRDSK 70

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.3 bits (112), Expect = 2e-08
 Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 1/81 (1%)

Query: 1  MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSN 60
          +    G    VTG   G+GRA +LA A +G  V V DL  +           +       
Sbjct: 3  LRFD-GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR 61

Query: 61 LGFPSAMFIRCDVTNTKFALA 81
               A+     V   +  + 
Sbjct: 62 RRGGKAVANYDSVEAGEKLVK 82

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 47.2 bits (111), Expect = 2e-08
 Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 14/70 (20%)

Query: 8  SAFVTGGASGIGRALSLALAGKGVFVTVV--DLSEEKGNEVAALVEKENAKFHSNLGFPS 65
          S  VTG   GIG  L   L        ++      EK  E+ ++ +              
Sbjct: 5  SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR------------ 52

Query: 66 AMFIRCDVTN 75
             +   VT 
Sbjct: 53 VHVLPLTVTC 62

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 47.4 bits (111), Expect = 2e-08
 Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 2/71 (2%)

Query: 9  AFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSA 66
            + G A+   I   ++ +   +G  +    L+E     V  + ++ N+ +   L     
Sbjct: 8  GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKE 67

Query: 67 MFIRCDVTNTK 77
             +    + K
Sbjct: 68 EHFKSLYNSVK 78

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 47.0 bits (110), Expect = 2e-08
 Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 3/48 (6%)

Query: 8  SAFVTGGASGIGRALS---LALAGKGVFVTVVDLSEEKGNEVAALVEK 52
          S  +TG   G+G  L    L L      +     + E+  E+  L + 
Sbjct: 4  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN 51

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 47.2 bits (111), Expect = 2e-08
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAK 56
            ++G A+GIG A    L   G  +  +D+ + +   +A L   E  K
Sbjct: 4  IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--VIADLSTAEGRK 49

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 2e-08
 Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 1/51 (1%)

Query: 9  AFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFH 58
          A VTGG  GIG A+   L       V +      +G      ++ E     
Sbjct: 6  ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR 56

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 46.8 bits (110), Expect = 2e-08
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE 51
            V GG   +G A+       G  V  +DLS     +   LV+
Sbjct: 5  VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD 47

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.7 bits (110), Expect = 2e-08
 Identities = 9/47 (19%), Positives = 20/47 (42%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENA 55
            V GG   +G     A   +  +V  +D+ E +    + +V+  ++
Sbjct: 5  VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDS 51

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 45.8 bits (107), Expect = 5e-08
 Identities = 16/63 (25%), Positives = 23/63 (36%)

Query: 11 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIR 70
          + GG   +G+ L+L LA  G  + V    EEK    AA   +                  
Sbjct: 5  LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEA 64

Query: 71 CDV 73
          CD+
Sbjct: 65 CDI 67

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 45.7 bits (106), Expect = 8e-08
 Identities = 16/81 (19%), Positives = 24/81 (29%), Gaps = 8/81 (9%)

Query: 6  GLSAFVTGGASGIGRALSLALAGKGVFVTVVD--------LSEEKGNEVAALVEKENAKF 57
          G    V GG    G A +L L+ K   V +VD              +        +    
Sbjct: 1  GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 60

Query: 58 HSNLGFPSAMFIRCDVTNTKF 78
             L   S      D+ + +F
Sbjct: 61 WKALTGKSIELYVGDICDFEF 81

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 45.1 bits (105), Expect = 9e-08
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 1  MELKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAK 56
          ++L+ G  AF+ G A   G G A++ +LA  G  + V            +L   +  +
Sbjct: 4  IDLR-GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQ 60

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 44.8 bits (104), Expect = 1e-07
 Identities = 5/42 (11%), Positives = 13/42 (30%), Gaps = 2/42 (4%)

Query: 9  AFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
            V+G    S I   ++     +G  + +      +  +   
Sbjct: 9  ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT 50

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 43.7 bits (102), Expect = 3e-07
 Identities = 9/52 (17%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 9  AFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFH 58
            VTG AS   I   ++ A+  +G  +     +++    V     +  +   
Sbjct: 8  ILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV 59

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 44.2 bits (102), Expect = 3e-07
 Identities = 11/75 (14%), Positives = 25/75 (33%), Gaps = 15/75 (20%)

Query: 10 FVTGGASGIGRALSLALAGKGVF-VTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
           + G    IG  L+  L  +  + V  +D+  +  +         +  FH         F
Sbjct: 4  LILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-----LNHPHFH---------F 49

Query: 69 IRCDVTNTKFALAFL 83
          +  D++     + + 
Sbjct: 50 VEGDISIHSEWIEYH 64

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 43.3 bits (100), Expect = 5e-07
 Identities = 15/70 (21%), Positives = 21/70 (30%), Gaps = 10/70 (14%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
           FVTG     G  LSL L   G  V    L+      +      E A+    +       
Sbjct: 11 VFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSL-----FETARVADGM-----QS 60

Query: 69 IRCDVTNTKF 78
             D+ +   
Sbjct: 61 EIGDIRDQNK 70

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (100), Expect = 5e-07
 Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFI 69
           VTGGA  IG    L L   G    V+D          +L   E+ +    L   S  F 
Sbjct: 6  LVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSL--PESLRRVQELTGRSVEFE 63

Query: 70 RCDVTN 75
            D+ +
Sbjct: 64 EMDILD 69

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 43.0 bits (100), Expect = 6e-07
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 8/69 (11%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFI 69
           VTGG+  IG    + L   G  V ++D        V  ++E+   K  +        F+
Sbjct: 4  LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPT--------FV 55

Query: 70 RCDVTNTKF 78
            D+ N   
Sbjct: 56 EGDIRNEAL 64

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.5 bits (96), Expect = 2e-06
 Identities = 11/70 (15%), Positives = 16/70 (22%), Gaps = 9/70 (12%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A VTG     G  L+  L  KG  V  +                               +
Sbjct: 3  ALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQ---------Y 53

Query: 69 IRCDVTNTKF 78
             D+ +   
Sbjct: 54 EDGDMADACS 63

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 41.6 bits (96), Expect = 2e-06
 Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 9/69 (13%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFI 69
           +TGG   +G  L+     +G+ + V D    KG             F          F+
Sbjct: 4  LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFE---------FV 54

Query: 70 RCDVTNTKF 78
            D+ N   
Sbjct: 55 HGDIRNKND 63

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 41.7 bits (97), Expect = 2e-06
 Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 4/69 (5%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG     G  L+  L  KG  V  +       N        ++     +   P    
Sbjct: 4  ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFN----TERVDHIYQDPHTCNPKFHL 59

Query: 69 IRCDVTNTK 77
             D+++T 
Sbjct: 60 HYGDLSDTS 68

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.2 bits (95), Expect = 3e-06
 Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 10/70 (14%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
           VTGGA  IG    + L   G    V D LS    + VA L                  F
Sbjct: 5  LVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIP---------F 55

Query: 69 IRCDVTNTKF 78
             D+ + K 
Sbjct: 56 YEVDLCDRKG 65

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 40.7 bits (93), Expect = 4e-06
 Identities = 6/50 (12%), Positives = 14/50 (28%), Gaps = 2/50 (4%)

Query: 9  AFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAK 56
           F+ G     G G  ++  L+ + V +            +      +   
Sbjct: 5  CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDN 54

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 40.7 bits (94), Expect = 4e-06
 Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 12/71 (16%)

Query: 10 FVTGGASGIGRALSLAL--AGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAM 67
           VTGGA  IG      +      V VTV+D     GN       K N +           
Sbjct: 6  IVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN-------KANLEAILGDRVE--- 55

Query: 68 FIRCDVTNTKF 78
           +  D+ + + 
Sbjct: 56 LVVGDIADAEL 66

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 40.2 bits (93), Expect = 6e-06
 Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 2/45 (4%)

Query: 6  GLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
          G  A V G  +   +G A++  L   G  V +   +E    E   
Sbjct: 8  GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK 52

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 40.2 bits (92), Expect = 7e-06
 Identities = 9/66 (13%), Positives = 16/66 (24%), Gaps = 7/66 (10%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFI 69
           VTG    +   +   L   G  V     S  K   +    + +               +
Sbjct: 15 LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFET-------AV 67

Query: 70 RCDVTN 75
            D+  
Sbjct: 68 VEDMLK 73

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (91), Expect = 9e-06
 Identities = 14/70 (20%), Positives = 22/70 (31%), Gaps = 3/70 (4%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG     G  L+  L  KG  V  +       N        +N + H          
Sbjct: 4  ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK---L 60

Query: 69 IRCDVTNTKF 78
             D+T++  
Sbjct: 61 HYGDLTDSTC 70

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 39.6 bits (90), Expect = 1e-05
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 4/64 (6%)

Query: 10 FVTGGASGIGRALSLALAGKGVF-VTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAM 67
           VTGGA  IG  +  AL  KG+  + VVD L    G +   LV+   A +     F   +
Sbjct: 3  IVTGGAGFIGSNIVKALNDKGITDILVVDNLK--DGTKFVNLVDLNIADYMDKEDFLIQI 60

Query: 68 FIRC 71
              
Sbjct: 61 MAGE 64

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.3 bits (90), Expect = 1e-05
 Identities = 14/69 (20%), Positives = 20/69 (28%), Gaps = 3/69 (4%)

Query: 9  AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
          A +TG     G  L+  L GKG  V  +       N               N+       
Sbjct: 4  ALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQR---INHIYIDPHNVNKALMKL 60

Query: 69 IRCDVTNTK 77
             D+T+  
Sbjct: 61 HYADLTDAS 69

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 39.0 bits (89), Expect = 2e-05
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSE 40
           +TG    +GR +   L GK V V   D+ +
Sbjct: 5  LITGANGQLGREIQKQLKGKNVEVIPTDVQD 35

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.7 bits (88), Expect = 2e-05
 Identities = 7/44 (15%), Positives = 14/44 (31%), Gaps = 2/44 (4%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDL--SEEKGNEVAALVE 51
           VTG +   G+ +   L           L  S +   ++    +
Sbjct: 7  LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD 50

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 2e-05
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
           +TGGA  +G  L+  L   G  VTVVD     +   V   +  EN +   N      ++
Sbjct: 5  LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELI-NHDVVEPLY 63

Query: 69 IRCDV 73
          I  D 
Sbjct: 64 IEVDQ 68

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 37.8 bits (86), Expect = 4e-05
 Identities = 18/78 (23%), Positives = 22/78 (28%), Gaps = 9/78 (11%)

Query: 10 FVTGGASGIGRALSLAL-AGKGVFVTVVDLSEEKGNEVAALVEKENAK--------FHSN 60
           V GGA  IG     AL       V +VD       +   +  +EN              
Sbjct: 6  LVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPP 65

Query: 61 LGFPSAMFIRCDVTNTKF 78
               A     DV N  F
Sbjct: 66 WADRYAALEVGDVRNEDF 83

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 37.8 bits (86), Expect = 4e-05
 Identities = 9/75 (12%), Positives = 23/75 (30%), Gaps = 6/75 (8%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFI 69
           + G    IGR ++ A    G    ++       +        E A+   +     A  +
Sbjct: 7  LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASS------NSEKAQLLESFKASGANIV 60

Query: 70 RCDVTNTKFALAFLR 84
             + +    +  ++
Sbjct: 61 HGSIDDHASLVEAVK 75

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 37.4 bits (85), Expect = 5e-05
 Identities = 11/73 (15%), Positives = 21/73 (28%), Gaps = 7/73 (9%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFI 69
           + GG   IG+ +  A    G    V+   E   N        +  +         A  I
Sbjct: 7  LIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSN-------IDKVQMLLYFKQLGAKLI 59

Query: 70 RCDVTNTKFALAF 82
             + + +  +  
Sbjct: 60 EASLDDHQRLVDA 72

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (83), Expect = 1e-04
 Identities = 6/33 (18%), Positives = 9/33 (27%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEK 42
           + G     G          G  VTV+     +
Sbjct: 7  AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR 39

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.7 bits (81), Expect = 2e-04
 Identities = 7/31 (22%), Positives = 13/31 (41%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSE 40
           +TG    I   ++  L  +G +V   D  +
Sbjct: 19 SITGAGGFIASHIARRLKHEGHYVIASDWKK 49

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.3 bits (80), Expect = 3e-04
 Identities = 13/54 (24%), Positives = 19/54 (35%), Gaps = 1/54 (1%)

Query: 11 VTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGF 63
          +TG A  IG  L   L      V  +D  +      +  +    + K  SN  F
Sbjct: 21 ITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKF 74

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 35.2 bits (80), Expect = 3e-04
 Identities = 11/73 (15%), Positives = 19/73 (26%), Gaps = 4/73 (5%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEE----KGNEVAALVEKENAKFHSNLGFPS 65
          F+ G    +G A+   L  +G    V+   +E        V      E            
Sbjct: 6  FIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKV 65

Query: 66 AMFIRCDVTNTKF 78
             +  +     F
Sbjct: 66 GGIVANNTYPADF 78

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 34.2 bits (77), Expect = 7e-04
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 14 GASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48
          G+  + R     L   G+ VTV   + E   +++A
Sbjct: 9  GSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA 43

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 34.1 bits (76), Expect = 8e-04
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 6/51 (11%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGN-----EVAALVEKEN 54
           + G    +G  L  +LA  G  + +   S+E  G+      VA  V K  
Sbjct: 4  LLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLR 54

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 33.6 bits (76), Expect = 0.001
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 10/69 (14%)

Query: 10 FVTGGASGIGRALSLALAGKGVFVTV-VDLSEEKGNEVAALVEKENAKFHSNLGFPSAMF 68
           +TGGA  IG A+   +        V +D     GN  +     E+ +++         F
Sbjct: 4  LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYN---------F 54

Query: 69 IRCDVTNTK 77
             D+ ++ 
Sbjct: 55 EHADICDSA 63

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 32.9 bits (74), Expect = 0.002
 Identities = 15/72 (20%), Positives = 21/72 (29%), Gaps = 15/72 (20%)

Query: 10 FVTGGASGIGRALSLALAGKGVF------VTVVDLSEEKGNEVAALVEKENAKFHSNLGF 63
           VTGGA  IG      L            V V+D     GN         + +       
Sbjct: 4  LVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLR----- 58

Query: 64 PSAMFIRCDVTN 75
              F+  D+ +
Sbjct: 59 ----FVHGDIRD 66

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	85
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.81
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.8
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.8
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.79
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.79
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.78
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.78
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.78
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.78
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.78
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.77
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.77
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.77
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.76
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.75
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.75
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.75
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.75
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.75
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.75
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.75
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.75
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.74
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.74
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.74
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.74
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.74
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.74
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.73
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.73
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.73
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.73
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.72
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.71
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.71
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.7
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.7
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.7
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.7
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.67
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.66
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.66
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.65
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.64
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.64
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.64
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.62
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.62
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.61
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.6
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.6
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.58
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.55
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.55
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.49
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.48
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.46
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.41
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.41
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.4
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.34
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.3
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.27
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.27
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.24
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.23
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.22
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.18
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.16
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.16
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.16
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.15
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.12
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.12
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.09
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.08
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.07
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.05
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.0
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.98
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	98.95
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.95
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.91
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.91
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.86
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.82
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.8
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.76
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.76
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.73
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.73
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.58
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.4
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.39
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.3
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.27
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	98.26
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.21
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.17
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.12
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.11
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.09
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.0
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.98
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	97.94
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.93
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.91
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.84
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.8
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.76
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.72
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.71
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.68
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.65
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.6
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.57
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.57
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.53
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.52
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.45
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.44
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.43
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.41
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.39
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.38
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.38
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.37
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.37
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.35
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	97.35
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.33
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.29
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.26
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.22
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.2
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	97.2
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.1
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	97.08
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	97.06
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	97.04
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.0
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.98
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.97
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.94
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.9
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.9
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.87
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.86
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.85
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.81
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.8
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.79
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	96.7
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.68
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.67
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.66
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.63
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.63
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.62
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.58
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.53
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.45
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.43
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.42
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.41
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.39
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.39
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.39
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.32
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.31
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.29
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	96.25
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.24
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.19
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.19
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	96.18
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.15
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.14
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.09
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.09
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.05
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.04
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.01
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.0
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	95.99
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	95.99
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.98
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.96
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.93
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	95.91
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.86
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.86
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	95.82
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	95.81
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.78
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	95.78
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.78
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.73
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.73
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	95.71
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.71
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.58
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	95.57
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.55
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.53
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.5
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	95.47
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	95.46
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	95.44
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	95.44
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.42
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.4
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	95.39
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.35
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.34
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.33
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	95.32
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	95.31
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	95.28
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	95.28
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.26
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.19
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	95.19
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	95.19
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.15
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.08
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	95.08
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.05
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.92
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.91
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	94.9
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.89
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	94.85
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	94.76
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	94.74
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.58
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	94.48
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	94.47
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	94.43
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.42
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	94.19
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	94.09
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.09
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	94.09
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	94.09
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.04
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	94.03
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	94.01
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.0
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.0
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	93.97
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	93.95
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	93.92
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	93.82
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	93.81
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	93.74
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	93.69
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	93.66
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.63
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	93.61
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	93.49
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	93.48
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	93.43
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	93.32
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	93.19
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	93.18
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	93.17
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.07
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	93.02
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	92.88
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.81
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.72
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	92.63
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	92.63
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	92.61
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	92.61
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	92.36
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	92.28
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.22
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	92.18
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.14
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	91.94
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	91.86
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	91.83
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	91.76
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.62
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	91.58
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	91.22
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	91.13
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	91.07
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.05
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.01
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	90.99
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.88
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.8
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	90.79
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	90.71
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	90.7
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	90.6
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	90.54
d1ihua1	296	Arsenite-translocating ATPase ArsA {Escherichia co	90.29
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	90.24
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.14
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	90.13
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	90.1
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.9
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	89.65
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	89.6
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	89.56
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	89.43
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.41
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	89.35
d1jzta_	243	Hypothetical protein YNL200c (YNU0_YEAST) {Baker's	89.3
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	89.11
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	89.07
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	88.87
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	88.4
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	88.14
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	88.07
d1vb3a1	428	Threonine synthase {Escherichia coli [TaxId: 562]}	87.85
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	87.73
d1ko7a2	169	HPr kinase HprK C-terminal domain {Staphylococcus	87.28
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.23
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	87.2
d1iowa1	96	D-Ala-D-Ala ligase, N-domain {Escherichia coli, ge	87.17
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	87.1
d1im5a_	179	Pyrazinamidase/nicotinamidase {Archaeon Pyrococcus	86.99
d1knxa2	177	HPr kinase HprK C-terminal domain {Mycoplasma pneu	86.88
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	86.81
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	86.59
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	86.42
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	86.28
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.23
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	86.15
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	86.14
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	85.82
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	85.81
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	85.68
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	85.57
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	85.56
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	85.36
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	85.33
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	85.29
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	85.09
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	85.03
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	85.0
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	84.99
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	84.76
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	84.69
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	84.54
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	84.45
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	84.36
d1qama_	235	rRNA adenine dimethylase {Bacillus subtilis, Ermc'	84.18
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	84.18
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	84.1
d2gcxa1	75	Ferrous iron transport protein A, FeoA {Klebsiella	84.08
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	84.04
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	83.99
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	83.79
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	83.59
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	83.23
d1zq9a1	278	Probable dimethyladenosine transferase {Human (Hom	83.2
d1np6a_	170	Molybdopterin-guanine dinucleotide biosynthesis pr	82.94
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	82.89
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	82.87
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	82.83
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	82.79
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	82.51
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	81.93
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	81.93
d1x9ga_	192	Ribonuclease MAR1 {Leishmania donovani [TaxId: 566	81.87
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	81.85
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	81.67
d1yaca_	204	YcaC {Escherichia coli [TaxId: 562]}	81.65
d1kdga1	360	Flavoprotein domain of flavocytochrome cellobiose	81.56
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	81.55
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	81.51
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	81.2
d1p3y1_	183	MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}	80.78
d1khta_	190	Adenylate kinase {Archaeon Methanococcus voltae [T	80.33

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=5.8e-20  Score=108.99  Aligned_cols=74  Identities=27%  Similarity=0.479  Sum_probs=68.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|+ ||+++|||+++|||++++++|+++|++|++++|++++++++.+++...+..         +.++++|++++++ +
T Consensus         7 m~L~-gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~---------~~~~~~Dvs~~~~~~   76 (255)
T d1fmca_           7 LRLD-GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---------AFACRCDITSEQELS   76 (255)
T ss_dssp             GCCT-TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCc---------EEEEEccCCCHHHHH
Confidence            5678 999999999999999999999999999999999999999999999876655         8999999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        77 ~~~~~   81 (255)
T d1fmca_          77 ALADF   81 (255)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.2e-19  Score=105.95  Aligned_cols=74  Identities=22%  Similarity=0.215  Sum_probs=67.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +++. ||+++|||+++|||++++++|+++|++|++++|++++++.+.+++...+..         +.++.||++|+++ +
T Consensus         3 ~~l~-Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~---------~~~~~~Dvs~~~~v~   72 (244)
T d1yb1a_           3 KSVT-GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK---------VHTFVVDCSNREDIY   72 (244)
T ss_dssp             CCCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEeeCCCHHHHH
Confidence            3577 999999999999999999999999999999999999999999999876655         8999999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        73 ~~~~~   77 (244)
T d1yb1a_          73 SSAKK   77 (244)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.80  E-value=2.1e-19  Score=106.69  Aligned_cols=74  Identities=24%  Similarity=0.305  Sum_probs=67.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      ++|+ ||+++|||+++|||++++++|+++|++|++++|++++++.+.+++...+..         +.++.+|++|+++ +
T Consensus         4 f~L~-GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~---------~~~~~~Dv~~~~~v~   73 (259)
T d2ae2a_           4 WNLE-GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK---------VEASVCDLSSRSERQ   73 (259)
T ss_dssp             TCCT-TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE---------EEEEECCTTCHHHHH
T ss_pred             cCCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC---------ceEEEeeCCCHHHHH
Confidence            4688 999999999999999999999999999999999999999999998876655         8899999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        74 ~~~~~   78 (259)
T d2ae2a_          74 ELMNT   78 (259)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.3e-19  Score=106.44  Aligned_cols=74  Identities=27%  Similarity=0.301  Sum_probs=66.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |+ +|+++|||+++|||+++++.|+++|++|++++|++++++.+.+++...+...       ++.++.||++++++ +++
T Consensus         8 lk-~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~-------~~~~~~~Dls~~~~v~~~   79 (257)
T d1xg5a_           8 WR-DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPG-------TLIPYRCDLSNEEDILSM   79 (257)
T ss_dssp             GT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSS-------EEEEEECCTTCHHHHHHH
T ss_pred             CC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCc-------eEEEEEccCCCHHHHHHH
Confidence            67 9999999999999999999999999999999999999999999998765432       28999999999999 998


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        80 v~~   82 (257)
T d1xg5a_          80 FSA   82 (257)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.79  E-value=3.1e-19  Score=105.96  Aligned_cols=75  Identities=32%  Similarity=0.421  Sum_probs=66.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|+ ||+++|||+++|||++++++|+++|++|++++|+++.+++..+++....+.        ++.++.+|++++++ +
T Consensus         5 m~l~-gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~--------~~~~~~~Dv~~~~~v~   75 (260)
T d1h5qa_           5 ISFV-NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV--------KTKAYQCDVSNTDIVT   75 (260)
T ss_dssp             ECCT-TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTC--------CEEEEECCTTCHHHHH
T ss_pred             ccCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCC--------ceEEEEccCCCHHHHH
Confidence            5688 999999999999999999999999999999999999988888887655432        18999999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        76 ~~~~~   80 (260)
T d1h5qa_          76 KTIQQ   80 (260)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98865

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.78  E-value=4.7e-19  Score=104.79  Aligned_cols=73  Identities=19%  Similarity=0.186  Sum_probs=66.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ +|+++|||+++|||++++++|+++|++|++++|+++.++.+.+++...+..         +.++.+|++|+++ ++
T Consensus         7 ~le-nKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~---------~~~~~~Dvt~~~~v~~   76 (251)
T d2c07a1           7 CGE-NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE---------SSGYAGDVSKKEEISE   76 (251)
T ss_dssp             CCS-SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCC---------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHHH
Confidence            467 999999999999999999999999999999999999999999998765554         8999999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        77 ~~~~   80 (251)
T d2c07a1          77 VINK   80 (251)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8875

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.78  E-value=1e-18  Score=103.34  Aligned_cols=75  Identities=31%  Similarity=0.456  Sum_probs=66.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      ++|+ ||+++|||+++|||++++++|+++|++|++++|++++++...+++.+.++.        ++.++.+|++++++ +
T Consensus         1 f~l~-gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~--------~~~~~~~Dv~~~~~v~   71 (251)
T d1vl8a_           1 FDLR-GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV--------ETMAFRCDVSNYEEVK   71 (251)
T ss_dssp             CCCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--------CEEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCC--------cEEEEEccCCCHHHHH
Confidence            4688 999999999999999999999999999999999999988888888665432        18899999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        72 ~~~~~   76 (251)
T d1vl8a_          72 KLLEA   76 (251)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98875

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.78  E-value=6.5e-19  Score=104.61  Aligned_cols=73  Identities=27%  Similarity=0.380  Sum_probs=66.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||+++++.|+++|++|++++|+++.++.+.+++...+..         +.++.+|++++++ ++
T Consensus         2 rL~-gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~---------~~~~~~Dv~~~~~v~~   71 (260)
T d1zema1           2 KFN-GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE---------ARSYVCDVTSEEAVIG   71 (260)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSC---------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHHH
Confidence            577 999999999999999999999999999999999999999999888766555         8999999999999 98


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        72 ~~~~   75 (260)
T d1zema1          72 TVDS   75 (260)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8865

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.78  E-value=7.7e-19  Score=104.06  Aligned_cols=71  Identities=25%  Similarity=0.238  Sum_probs=65.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +||+++|||+++|||++++++|+++|++|++++|+++.++.+.+++...+..         +.++++|++|+++ +++++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~---------~~~~~~Dvs~~~~v~~~~~   71 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE---------ADGRTCDVRSVPEIEALVA   71 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEeecCCHHHHHHHHH
Confidence            3899999999999999999999999999999999999999999999766555         8999999999999 99887


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        72 ~   72 (257)
T d2rhca1          72 A   72 (257)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.78  E-value=6e-19  Score=104.58  Aligned_cols=71  Identities=34%  Similarity=0.449  Sum_probs=63.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|+ ||+++|||+++|||+++++.|+++|++|++++|+++.++.+.+++   +..         +.++.+|++++++ +
T Consensus         1 M~L~-gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~---------~~~~~~Dvt~~~~v~   67 (256)
T d1k2wa_           1 MRLD-GKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPA---------ACAIALDVTDQASID   67 (256)
T ss_dssp             CTTT-TEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTT---------EEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCc---------eEEEEeeCCCHHHHH
Confidence            8899 999999999999999999999999999999999998888777665   233         8899999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        68 ~~~~~   72 (256)
T d1k2wa_          68 RCVAE   72 (256)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98875

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.77  E-value=1.2e-18  Score=103.39  Aligned_cols=75  Identities=25%  Similarity=0.344  Sum_probs=66.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||++++++|+++|++|++++|+++.++...+++...+...       ++.++.+|++|+++ ++
T Consensus         1 rl~-gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~-------~~~~~~~Dvt~~~~v~~   72 (258)
T d1iy8a_           1 RFT-DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA-------EVLTTVADVSDEAQVEA   72 (258)
T ss_dssp             CCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTC-------CEEEEECCTTSHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCC-------eEEEEeccCCCHHHHHH
Confidence            477 9999999999999999999999999999999999999999888887765432       28899999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        73 ~~~~   76 (258)
T d1iy8a_          73 YVTA   76 (258)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8865

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.77  E-value=1.1e-18  Score=103.61  Aligned_cols=73  Identities=29%  Similarity=0.362  Sum_probs=67.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||++++++|+++|++|++++|++++++++.+++...+..         +.++.+|++++++ ++
T Consensus         3 ~L~-gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~---------~~~~~~D~s~~~~~~~   72 (258)
T d1ae1a_           3 SLK-GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN---------VEGSVCDLLSRTERDK   72 (258)
T ss_dssp             CCT-TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC---------ceEEEeecCCHHHHHH
Confidence            577 999999999999999999999999999999999999999999888776665         8899999999999 98


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        73 ~~~~   76 (258)
T d1ae1a_          73 LMQT   76 (258)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=1.4e-18  Score=103.19  Aligned_cols=73  Identities=26%  Similarity=0.308  Sum_probs=66.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||++++++|++.|++|++++|++++++++.+++...+..         +.++.+|++++++ ++
T Consensus         5 ~Lk-gK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~~   74 (259)
T d1xq1a_           5 SLK-AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ---------VTGSVCDASLRPEREK   74 (259)
T ss_dssp             CCT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTSHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------eEEEeccCCCHHHHHH
Confidence            577 999999999999999999999999999999999999999999888766555         8999999999999 98


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        75 ~~~~   78 (259)
T d1xq1a_          75 LMQT   78 (259)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.76  E-value=9.1e-19  Score=103.12  Aligned_cols=69  Identities=32%  Similarity=0.378  Sum_probs=61.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|+ +|+++|||+++|||++++++|+++|++|++++|+++.++...+++.              ..++.+|++|+++ +
T Consensus         1 M~L~-gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~--------------~~~~~~Dv~~~~~v~   65 (242)
T d1ulsa_           1 MRLK-DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--------------AHPVVMDVADPASVE   65 (242)
T ss_dssp             CTTT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT--------------CEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--------------CeEEEEecCCHHHHH
Confidence            8899 9999999999999999999999999999999999887776655431              6789999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        66 ~~~~~   70 (242)
T d1ulsa_          66 RGFAE   70 (242)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98865

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.75  E-value=3.4e-18  Score=102.21  Aligned_cols=71  Identities=37%  Similarity=0.428  Sum_probs=62.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|+ ||+++|||+++|||+++++.|+++|++|++++|++++++++.+++   +..         +.++.+|++++++ +
T Consensus         1 M~L~-gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~---------~~~~~~Dv~~~~~~~   67 (276)
T d1bdba_           1 MKLK-GEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDN---------VLGIVGDVRSLEDQK   67 (276)
T ss_dssp             CTTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGG---------EEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCC---------eeEEecccccHHHHH
Confidence            8899 999999999999999999999999999999999988777665544   333         8999999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        68 ~~~~~   72 (276)
T d1bdba_          68 QAASR   72 (276)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.75  E-value=2.1e-18  Score=102.66  Aligned_cols=72  Identities=26%  Similarity=0.450  Sum_probs=63.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||++++++|+++|++|++++|+++.++++.+++...+ .         +.++.+|++|+++ ++
T Consensus         3 rL~-gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~---------~~~~~~Dv~~~~~v~~   71 (268)
T d2bgka1           3 RLQ-DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-V---------ISFVHCDVTKDEDVRN   71 (268)
T ss_dssp             TTT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT-T---------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC-c---------eEEEEccCCCHHHHHH
Confidence            577 9999999999999999999999999999999999998888888775322 2         7789999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        72 ~~~~   75 (268)
T d2bgka1          72 LVDT   75 (268)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8865

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.4e-18  Score=102.31  Aligned_cols=77  Identities=26%  Similarity=0.330  Sum_probs=67.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |+ ||+++|||+++|||++++++|++.|++|++++|+.++++...+++......    ..+.++.++.+|++|+++ +++
T Consensus        10 L~-gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~----~~~~~~~~~~~Dvs~~~~v~~~   84 (297)
T d1yxma1          10 LQ-GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP----TKQARVIPIQCNIRNEEEVNNL   84 (297)
T ss_dssp             TT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCT----TCCCCEEEEECCTTCHHHHHHH
T ss_pred             CC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhcc----ccCceEEEEeccCCCHHHHHHH
Confidence            67 999999999999999999999999999999999999999999888754322    223458999999999999 998


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus        85 ~~~   87 (297)
T d1yxma1          85 VKS   87 (297)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            865

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.75  E-value=3.5e-18  Score=100.60  Aligned_cols=71  Identities=25%  Similarity=0.278  Sum_probs=62.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+|+ ||+++|||+++|||++++++|+++|++|++++|++++++++.+++    ..         +.++.+|++|+++ +
T Consensus         1 mdl~-GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~---------~~~~~~Dv~~~~~v~   66 (242)
T d1cyda_           1 LNFS-GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PG---------IEPVCVDLGDWDATE   66 (242)
T ss_dssp             CCCT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT---------CEEEECCTTCHHHHH
T ss_pred             CCCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CC---------CeEEEEeCCCHHHHH
Confidence            8899 999999999999999999999999999999999988777665544    23         7889999999999 9


Q ss_pred             HHhhhC
Q 034737           80 LAFLRL   85 (85)
Q Consensus        80 ~~~~~~   85 (85)
                      ++++++
T Consensus        67 ~~~~~~   72 (242)
T d1cyda_          67 KALGGI   72 (242)
T ss_dssp             HHHTTC
T ss_pred             HHHHHc
Confidence            988753

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=3.3e-18  Score=101.19  Aligned_cols=72  Identities=38%  Similarity=0.540  Sum_probs=63.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ||+++|||+++|||++++++|+++|++|++++|+.++++...+++.+.....       ++.++.+|++++++ ++++++
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~   75 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQ-------KTLFIQCDVADQQQLRDTFRK   75 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGG-------GEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCC-------cEEEEEeecCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998888886543322       28999999999999 998864

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.75  E-value=4.2e-18  Score=100.81  Aligned_cols=75  Identities=20%  Similarity=0.230  Sum_probs=66.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHh---CCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAG---KGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~---~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      .|. ||+++|||+++|||++++++|++   +|++|++++|++++++.+.+++...++...       +.++.+|++++++
T Consensus         3 ~L~-gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~-------~~~~~~Dvs~~~~   74 (259)
T d1oaaa_           3 GLG-CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK-------VVLAAADLGTEAG   74 (259)
T ss_dssp             CCB-SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSE-------EEEEECCTTSHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCce-------EEEEEccCCCHHH
Confidence            367 99999999999999999999986   799999999999999999999987655432       8999999999999


Q ss_pred             -HHHhhh
Q 034737           79 -ALAFLR   84 (85)
Q Consensus        79 -~~~~~~   84 (85)
                       +++++.
T Consensus        75 v~~l~~~   81 (259)
T d1oaaa_          75 VQRLLSA   81 (259)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             888753

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.75  E-value=4.1e-18  Score=101.65  Aligned_cols=76  Identities=22%  Similarity=0.291  Sum_probs=66.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||++++++|+++|++|++++|++++++.+.+++.+.+..      ..++.++.+|++++++ ++
T Consensus         2 rL~-gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~------~~~~~~~~~Dvs~~~~v~~   74 (272)
T d1xkqa_           2 RFS-NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS------EKQVNSVVADVTTEDGQDQ   74 (272)
T ss_dssp             TTT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC------GGGEEEEECCTTSHHHHHH
T ss_pred             CCC-CCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC------CCceEEEEccCCCHHHHHH
Confidence            477 999999999999999999999999999999999999999999988764321      1238999999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        75 ~~~~   78 (272)
T d1xkqa_          75 IINS   78 (272)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8865

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.75  E-value=4.9e-18  Score=100.91  Aligned_cols=76  Identities=22%  Similarity=0.242  Sum_probs=66.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||++++++|+++|++|++++|+++.++.+.+++...+..      ..++.++.+|++++++ ++
T Consensus         2 rl~-gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~------~~~~~~~~~Dvt~~~~v~~   74 (264)
T d1spxa_           2 RFA-EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVS------EQNVNSVVADVTTDAGQDE   74 (264)
T ss_dssp             TTT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC------GGGEEEEECCTTSHHHHHH
T ss_pred             CCC-CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC------cCceEEEEccCCCHHHHHH
Confidence            577 999999999999999999999999999999999999999999988765321      1238999999999999 98


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        75 ~~~~   78 (264)
T d1spxa_          75 ILST   78 (264)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.74  E-value=4.1e-18  Score=101.25  Aligned_cols=73  Identities=25%  Similarity=0.348  Sum_probs=64.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|+ ||+++|||+++|||++++++|+++|++|++++|+.+ .++.+.+++...+..         +.++++|++|+++ +
T Consensus         4 dL~-gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~---------~~~~~~Dvt~~~~v~   73 (261)
T d1geea_           4 DLE-GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE---------AIAVKGDVTVESDVI   73 (261)
T ss_dssp             GGT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCE---------EEEEECCTTSHHHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHH
Confidence            478 999999999999999999999999999999999864 677788888766555         8999999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        74 ~~~~~   78 (261)
T d1geea_          74 NLVQS   78 (261)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98865

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.74  E-value=5.7e-18  Score=100.22  Aligned_cols=70  Identities=27%  Similarity=0.449  Sum_probs=64.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      .|+++|||+++|||++++++|+++|++|++++|+++.++.+.+++...+..         +.++.+|++|+++ ++++++
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~---------~~~~~~Dv~~~~~v~~~~~~   71 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH---------AVAVKVDVSDRDQVFAAVEQ   71 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------EEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEeeCCCHHHHHHHHHH
Confidence            378999999999999999999999999999999999999999999876655         8999999999999 998765

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=5.2e-18  Score=99.91  Aligned_cols=70  Identities=27%  Similarity=0.370  Sum_probs=62.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||++++++|+++|++|++++|+++.++.+.+++.   ..         ..++.+|++++++ ++
T Consensus         1 dl~-gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~---------~~~~~~Dv~~~~~v~~   67 (243)
T d1q7ba_           1 NFE-GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---AN---------GKGLMLNVTDPASIES   67 (243)
T ss_dssp             CCT-TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GG---------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CC---------CcEEEEEecCHHHhhh
Confidence            477 9999999999999999999999999999999999988888777663   23         7889999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        68 ~~~~   71 (243)
T d1q7ba_          68 VLEK   71 (243)
T ss_dssp             HHHH
T ss_pred             hhhh
Confidence            8875

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.74  E-value=4.4e-18  Score=100.32  Aligned_cols=70  Identities=31%  Similarity=0.442  Sum_probs=62.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||+++++.|+++|++|++++|++++++.+.+++.   ..         +.++++|++|+++ ++
T Consensus         3 ~L~-gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~---------~~~~~~Dv~~~~~v~~   69 (244)
T d1nffa_           3 RLT-GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DA---------ARYVHLDVTQPAQWKA   69 (244)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GG---------EEEEECCTTCHHHHHH
T ss_pred             ccC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---Cc---------ceEEEeecCCHHHHHH
Confidence            367 9999999999999999999999999999999999988887777663   22         7889999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        70 ~~~~   73 (244)
T d1nffa_          70 AVDT   73 (244)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8875

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.74  E-value=9e-18  Score=100.75  Aligned_cols=74  Identities=20%  Similarity=0.402  Sum_probs=65.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||++||||+++|||++++++|+++|++|++++|+.++++...+++...++..        +.++.+|+++.++ ++
T Consensus        22 ~l~-gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~--------~~~~~~D~~~~~~v~~   92 (294)
T d1w6ua_          22 SFQ-GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK--------VHAIQCDVRDPDMVQN   92 (294)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSC--------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCc--------eEEEEecccChHHHHH
Confidence            577 9999999999999999999999999999999999999988888887655432        8899999999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +++.
T Consensus        93 ~~~~   96 (294)
T d1w6ua_          93 TVSE   96 (294)
T ss_dssp             HHHH
T ss_pred             Hhhh
Confidence            7653

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.74  E-value=7.3e-18  Score=100.65  Aligned_cols=76  Identities=24%  Similarity=0.303  Sum_probs=66.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||+++++.|++.|++|++++|++++++.+.+++...+..      ..++.++.+|++++++ ++
T Consensus         1 rL~-gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~------~~~~~~~~~Dv~~~~~v~~   73 (274)
T d1xhla_           1 RFS-GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP------AEKINAVVADVTEASGQDD   73 (274)
T ss_dssp             CCT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC------GGGEEEEECCTTSHHHHHH
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCC------CcceEEEEeeCCCHHHHHH
Confidence            477 999999999999999999999999999999999999999999998765421      1228999999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        74 ~~~~   77 (274)
T d1xhla_          74 IINT   77 (274)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8865

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.73  E-value=4.7e-18  Score=100.47  Aligned_cols=72  Identities=25%  Similarity=0.365  Sum_probs=63.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||++++++|+++|++|++++|+++.++.+.+++.. ..         ++.++.+|++|+++ ++
T Consensus         3 rL~-gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~---------~~~~~~~Dv~~~~~v~~   71 (251)
T d1zk4a1           3 RLD-GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PD---------QIQFFQHDSSDEDGWTK   71 (251)
T ss_dssp             TTT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TT---------TEEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CC---------cEEEEEccCCCHHHHHH
Confidence            477 99999999999999999999999999999999999888888777642 22         28899999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        72 ~~~~   75 (251)
T d1zk4a1          72 LFDA   75 (251)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8875

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.73  E-value=6.3e-18  Score=100.15  Aligned_cols=70  Identities=26%  Similarity=0.366  Sum_probs=61.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||++++++|+++|++|++++|++++++...+++   +..         +.++++|++++++ ++
T Consensus         2 dL~-gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dv~~~~~v~~   68 (254)
T d1hdca_           2 DLS-GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDA---------ARYQHLDVTIEEDWQR   68 (254)
T ss_dssp             CCC-CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGG---------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCc---------eEEEEcccCCHHHHHH
Confidence            578 999999999999999999999999999999999998777766655   233         8899999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        69 ~~~~   72 (254)
T d1hdca_          69 VVAY   72 (254)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8865

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.73  E-value=1e-17  Score=99.31  Aligned_cols=73  Identities=25%  Similarity=0.327  Sum_probs=63.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      |+ ||+++|||+++|||++++++|+++|++|++++|++ +.++.+.+++...++.        ++.++.+|++|+++ ++
T Consensus         2 L~-gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~--------~~~~~~~Dv~~~~~v~~   72 (260)
T d1x1ta1           2 LK-GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV--------KVLYDGADLSKGEAVRG   72 (260)
T ss_dssp             CT-TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS--------CEEEECCCTTSHHHHHH
T ss_pred             CC-cCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCC--------cEEEEECCCCCHHHHHH
Confidence            56 99999999999999999999999999999999975 5677777777665442        18899999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        73 ~~~~   76 (260)
T d1x1ta1          73 LVDN   76 (260)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8865

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.2e-17  Score=98.34  Aligned_cols=70  Identities=23%  Similarity=0.236  Sum_probs=60.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      .|+ ||+++|||+++|||++++++|+++|++|++++|++++++.+.+++    ..         +.++.+|++|+++ ++
T Consensus         4 ~L~-GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~----~~---------~~~~~~Dv~d~~~v~~   69 (244)
T d1pr9a_           4 FLA-GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----PG---------IEPVCVDLGDWEATER   69 (244)
T ss_dssp             CCT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT---------CEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc----CC---------CeEEEEeCCCHHHHHH
Confidence            457 999999999999999999999999999999999988777766544    23         7889999999999 99


Q ss_pred             HhhhC
Q 034737           81 AFLRL   85 (85)
Q Consensus        81 ~~~~~   85 (85)
                      +++++
T Consensus        70 ~~~~~   74 (244)
T d1pr9a_          70 ALGSV   74 (244)
T ss_dssp             HHTTC
T ss_pred             HHHHh
Confidence            88753

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.72  E-value=1.3e-17  Score=99.40  Aligned_cols=73  Identities=30%  Similarity=0.447  Sum_probs=64.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|+ ||+++|||+++|||++++++|+++|++|++++++. +.++.+.+++...+..         +.++.+|++|+++ +
T Consensus        15 sL~-gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~---------~~~~~~D~~~~~~v~   84 (272)
T d1g0oa_          15 SLE-GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD---------AACVKANVGVVEDIV   84 (272)
T ss_dssp             CCT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---------EEEEECCTTCHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCc---------eeeEeCCCCCHHHHH
Confidence            577 99999999999999999999999999999998875 5577777777766655         8999999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        85 ~~~~~   89 (272)
T d1g0oa_          85 RMFEE   89 (272)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.5e-17  Score=98.25  Aligned_cols=69  Identities=30%  Similarity=0.457  Sum_probs=60.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||+++++.|+++|++|++++|+++.++.+.+++    ..         +.++.+|++|+++ ++
T Consensus         3 rl~-GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~---------~~~~~~Dvs~~~~v~~   68 (250)
T d1ydea1           3 RYA-GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PG---------AVFILCDVTQEDDVKT   68 (250)
T ss_dssp             TTT-TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TT---------EEEEECCTTSHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CC---------CeEEEccCCCHHHHHH
Confidence            577 999999999999999999999999999999999988777665543    23         7899999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        69 ~~~~   72 (250)
T d1ydea1          69 LVSE   72 (250)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8875

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.71  E-value=4.1e-17  Score=96.21  Aligned_cols=71  Identities=30%  Similarity=0.439  Sum_probs=59.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||+++++.|++.|++|++++|++.+  .....+...+..         +.++.+|++|+++ ++
T Consensus         2 rL~-gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~---------~~~~~~Dvs~~~~v~~   69 (247)
T d2ew8a1           2 RLK-DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRR---------VLTVKCDVSQPGDVEA   69 (247)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCC---------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCc---------EEEEEeeCCCHHHHHH
Confidence            577 9999999999999999999999999999999998753  333344444433         8999999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        70 ~~~~   73 (247)
T d2ew8a1          70 FGKQ   73 (247)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8765

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.70  E-value=1.9e-17  Score=97.97  Aligned_cols=70  Identities=37%  Similarity=0.587  Sum_probs=62.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||++++++|+++|++|++++|+++.++.+.+++.   ..         ..++++|++++++ ++
T Consensus         3 rL~-gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~---~~---------~~~~~~Dv~~~~~~~~   69 (253)
T d1hxha_           3 RLQ-GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG---ER---------SMFVRHDVSSEADWTL   69 (253)
T ss_dssp             TTT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC---TT---------EEEECCCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---CC---------eEEEEeecCCHHHHHH
Confidence            577 9999999999999999999999999999999999988888777662   22         7889999999999 98


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        70 ~~~~   73 (253)
T d1hxha_          70 VMAA   73 (253)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8765

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.70  E-value=1.4e-17  Score=97.96  Aligned_cols=70  Identities=36%  Similarity=0.440  Sum_probs=60.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      .|. ||+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++   +..         +.++++|++++++ ++
T Consensus         2 ~l~-gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dls~~~~i~~   68 (241)
T d2a4ka1           2 RLS-GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAE---------AIAVVADVSDPKAVEA   68 (241)
T ss_dssp             TTT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSS---------EEEEECCTTSHHHHHH
T ss_pred             cCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCc---------eEEEEecCCCHHHHHH
Confidence            367 999999999999999999999999999999999987766555443   222         8899999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        69 ~~~~   72 (241)
T d2a4ka1          69 VFAE   72 (241)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8875

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.5e-17  Score=98.16  Aligned_cols=70  Identities=21%  Similarity=0.191  Sum_probs=63.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .+++||||+++|||++++++|+++ |++|++++|++++++.+.+++...+..         +.++.+|++|.++ +++++
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dvs~~~sv~~~~~   73 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS---------PRFHQLDIDDLQSIRALRD   73 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCC---------CEEEECCTTCHHHHHHHHH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEEecCCHHHHHHHHH
Confidence            457799999999999999999985 899999999999999999999877665         8999999999999 99876


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus        74 ~   74 (275)
T d1wmaa1          74 F   74 (275)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.70  E-value=4.3e-17  Score=96.53  Aligned_cols=73  Identities=30%  Similarity=0.422  Sum_probs=63.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +|. ||++||||+++|||+++++.|++.|++|+++++ +++.++.+.+++...+.+         +.++.+|++|+++ +
T Consensus         3 ~L~-GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~---------~~~~~~D~~~~~~v~   72 (259)
T d1ja9a_           3 PLA-GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ---------GVAIQADISKPSEVV   72 (259)
T ss_dssp             TTT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---------EEEEECCTTSHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCC---------ceEecCCCCCHHHHH
Confidence            477 999999999999999999999999999998765 555578888888776655         8999999999999 9


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        73 ~~~~~   77 (259)
T d1ja9a_          73 ALFDK   77 (259)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.67  E-value=2.1e-16  Score=93.48  Aligned_cols=75  Identities=21%  Similarity=0.178  Sum_probs=59.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCC-CHHH-
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVT-NTKF-   78 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~-   78 (85)
                      |+|+ ||+++|||+++|||++++++|+++|++|++++|+.++.+... ++......       ..+.++.+|++ +.++ 
T Consensus         1 m~l~-gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~-~~~~~~~~-------~~~~~~~~d~~~~~~~~   71 (254)
T d1sbya1           1 MDLT-NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALA-ELKAINPK-------VNITFHTYDVTVPVAES   71 (254)
T ss_dssp             CCCT-TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHH-HHHHHCTT-------SEEEEEECCTTSCHHHH
T ss_pred             CCCC-CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHH-HHHhhCCC-------CCEEEEEeecCCCHHHH
Confidence            7899 999999999999999999999999999999988877665554 33333322       23899999998 5667 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        72 ~~~~~~   77 (254)
T d1sbya1          72 KKLLKK   77 (254)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777664

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.4e-16  Score=93.06  Aligned_cols=72  Identities=29%  Similarity=0.374  Sum_probs=63.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |+ ||+++|||+++|||++++++|+++|++|++++|+++.++.+.+++.......        +..+.+|+++.+. ...
T Consensus        12 L~-GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~   82 (269)
T d1xu9a_          12 LQ-GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS--------AHYIAGTMEDMTFAEQF   82 (269)
T ss_dssp             GT-TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSE--------EEEEECCTTCHHHHHHH
T ss_pred             cC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhccc--------chhhhhhhhhHHHHHHH
Confidence            66 9999999999999999999999999999999999999999888877654432        7889999999888 766


Q ss_pred             hh
Q 034737           82 FL   83 (85)
Q Consensus        82 ~~   83 (85)
                      ++
T Consensus        83 ~~   84 (269)
T d1xu9a_          83 VA   84 (269)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.66  E-value=5e-16  Score=91.64  Aligned_cols=72  Identities=25%  Similarity=0.309  Sum_probs=58.6

Q ss_pred             CCCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            2 ELKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         2 ~l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      +|+ ||+++|||+++  |||++++++|+++|++|++.+|+++..+.. +++......         ..++++|++|+++ 
T Consensus         5 ~L~-gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~~~~---------~~~~~~D~~~~~~v   73 (256)
T d1ulua_           5 DLS-GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEALGG---------ALLFRADVTQDEEL   73 (256)
T ss_dssp             CCT-TCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHTTC---------CEEEECCTTCHHHH
T ss_pred             CCC-CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhccCc---------ccccccccCCHHHH
Confidence            577 99999999876  999999999999999999999987554443 344444434         6789999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      +++++.
T Consensus        74 ~~~~~~   79 (256)
T d1ulua_          74 DALFAG   79 (256)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.65  E-value=1.4e-16  Score=93.56  Aligned_cols=69  Identities=19%  Similarity=0.233  Sum_probs=62.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCE-------EEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVF-------VTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~-------v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      ++++|||+++|||++++++|+++|++       |++++|+++.++.+.+++...+..         +.++.+|++|+++ 
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~---------~~~~~~Dvt~~~~v   72 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL---------TDTITADISDMADV   72 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCE---------EEEEECCTTSHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEecCCCHHHH
Confidence            57899999999999999999999987       889999999999999998876655         8999999999999 


Q ss_pred             HHHhhh
Q 034737           79 ALAFLR   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      ++++++
T Consensus        73 ~~~~~~   78 (240)
T d2bd0a1          73 RRLTTH   78 (240)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998865

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.64  E-value=5.8e-16  Score=91.31  Aligned_cols=67  Identities=33%  Similarity=0.508  Sum_probs=55.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      .|+ ||+++|||+++|||+++++.|+++|++|++++|+++..+ ..+.+     .         ..++++|++|+++ ++
T Consensus         2 ~l~-GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-----~---------~~~~~~Dv~~~~~v~~   65 (248)
T d2d1ya1           2 LFA-GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-----G---------GAFFQVDLEDERERVR   65 (248)
T ss_dssp             TTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-----T---------CEEEECCTTCHHHHHH
T ss_pred             ccC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-----C---------CeEEEEeCCCHHHHHH
Confidence            367 999999999999999999999999999999999976433 22222     1         5678999999999 99


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        66 ~~~~   69 (248)
T d2d1ya1          66 FVEE   69 (248)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8865

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.64  E-value=9.6e-16  Score=87.24  Aligned_cols=72  Identities=24%  Similarity=0.245  Sum_probs=63.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ +|+++|||+++|||+.+++.|+++|++|++++|+.++++.+.+.+.....          +.+..+|+++.++ ++
T Consensus        20 ~l~-gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~d~~~~~~~~~   88 (191)
T d1luaa1          20 SVK-GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK----------VNVTAAETADDASRAE   88 (191)
T ss_dssp             CCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHT----------CCCEEEECCSHHHHHH
T ss_pred             CCC-CCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccc----------hhhhhhhcccHHHHHH
Confidence            577 99999999999999999999999999999999999999998888876543          5678899999999 88


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++..
T Consensus        89 ~~~~   92 (191)
T d1luaa1          89 AVKG   92 (191)
T ss_dssp             HTTT
T ss_pred             HhcC
Confidence            7654

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.64  E-value=6.7e-16  Score=90.83  Aligned_cols=69  Identities=28%  Similarity=0.324  Sum_probs=60.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      ++++|||+++|||++++++|++.|++|++.+ |+++.++.+.+++...+..         +.++++|++|+++ ++++++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~---------~~~~~~Dv~~~~~v~~~~~~   72 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ---------AITFGGDVSKEADVEAMMKT   72 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCE---------EEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCc---------EEEEeCCCCCHHHHHHHHHH
Confidence            5899999999999999999999999999876 4666788888888776655         8899999999999 998765

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.2e-15  Score=89.51  Aligned_cols=69  Identities=36%  Similarity=0.529  Sum_probs=59.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||++++++|+++|++|++++|+.+.++...+++.   ..         ...+.+|+.+... +.
T Consensus         2 slk-GKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~---~~---------~~~~~~~~~~~~~~~~   68 (248)
T d2o23a1           2 SVK-GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG---NN---------CVFAPADVTSEKDVQT   68 (248)
T ss_dssp             CCT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC---TT---------EEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC---CC---------cccccccccccccccc
Confidence            577 9999999999999999999999999999999999998888777663   22         7888999999887 66


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      .+.
T Consensus        69 ~~~   71 (248)
T d2o23a1          69 ALA   71 (248)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.62  E-value=1.2e-15  Score=89.58  Aligned_cols=69  Identities=19%  Similarity=0.197  Sum_probs=58.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHH---hCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            6 GLSAFVTGGASGIGRALSLALA---GKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~---~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      -|+++|||+++|||+++++.|+   ++|++|++++|++++++.+.+ +...+.+         +.++.+|++|+++ +++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~---------~~~~~~Dvs~~~~v~~~   71 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSN---------IHILEIDLRNFDAYDKL   71 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTT---------EEEEECCTTCGGGHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCc---------EEEEEEEeccHHHHHHH
Confidence            4689999999999999999997   479999999999998887654 3334444         8999999999999 888


Q ss_pred             hhh
Q 034737           82 FLR   84 (85)
Q Consensus        82 ~~~   84 (85)
                      ++.
T Consensus        72 ~~~   74 (248)
T d1snya_          72 VAD   74 (248)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.61  E-value=6.3e-16  Score=90.64  Aligned_cols=62  Identities=31%  Similarity=0.367  Sum_probs=55.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      +|+ ||+++|||+++|||++++++|+++|++|++++|+++..+           .         +..+++|++|+++ ++
T Consensus         4 sl~-gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----------~---------~~~~~~Dv~~~~~v~~   62 (237)
T d1uzma1           4 PFV-SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----------G---------LFGVEVDVTDSDAVDR   62 (237)
T ss_dssp             CCC-CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------T---------SEEEECCTTCHHHHHH
T ss_pred             CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-----------C---------ceEEEEecCCHHHHHH
Confidence            577 999999999999999999999999999999999875432           1         7889999999999 98


Q ss_pred             Hhhh
Q 034737           81 AFLR   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ++++
T Consensus        63 ~~~~   66 (237)
T d1uzma1          63 AFTA   66 (237)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8765

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.60  E-value=7e-16  Score=90.75  Aligned_cols=67  Identities=22%  Similarity=0.183  Sum_probs=55.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      .|++||||+++|||++++++|+++|+  +|++.+|+.++++.+.+.            ...++.++.+|+++.++ ++++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~------------~~~~~~~~~~Dvs~~~~v~~~~   70 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI------------KDSRVHVLPLTVTCDKSLDTFV   70 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC------------CCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh------------hCCceEEEEEecCCHHHHHHHH
Confidence            68999999999999999999999996  688889999877664321            11238999999999999 9887


Q ss_pred             hh
Q 034737           83 LR   84 (85)
Q Consensus        83 ~~   84 (85)
                      +.
T Consensus        71 ~~   72 (250)
T d1yo6a1          71 SK   72 (250)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.60  E-value=5e-15  Score=87.25  Aligned_cols=74  Identities=28%  Similarity=0.420  Sum_probs=60.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc---cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE---EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      ++|+++++|||+++|||++++++|+++|+ +|+++.|+.   +..+...+++...+..         +.++.+|++|+++
T Consensus         6 ~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~---------v~~~~~Dv~d~~~   76 (259)
T d2fr1a1           6 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGAR---------TTVAACDVTDRES   76 (259)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCE---------EEEEECCTTCHHH
T ss_pred             cCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcccc---------ccccccccchHHH
Confidence            44688999999999999999999999998 588888864   3456666666655544         8999999999999


Q ss_pred             -HHHhhhC
Q 034737           79 -ALAFLRL   85 (85)
Q Consensus        79 -~~~~~~~   85 (85)
                       +++++.+
T Consensus        77 ~~~~~~~i   84 (259)
T d2fr1a1          77 VRELLGGI   84 (259)
T ss_dssp             HHHHHHTS
T ss_pred             HHHhhccc
Confidence             9887653

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.58  E-value=6.4e-15  Score=87.26  Aligned_cols=71  Identities=17%  Similarity=0.227  Sum_probs=58.9

Q ss_pred             CCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+ ||++||||+++  |||+++++.|+++|++|++++|+++ ++...+++......         ..++.+|+++.++ +
T Consensus         3 L~-gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~---------~~~~~~d~~~~~~~~   71 (274)
T d2pd4a1           3 LK-GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS---------PYVYELDVSKEEHFK   71 (274)
T ss_dssp             TT-TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC---------CCEEECCTTCHHHHH
T ss_pred             CC-CCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCc---------eeEeeecccchhhHH
Confidence            66 99999999765  8999999999999999999999864 44455566655555         7789999999999 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus        72 ~~~~~   76 (274)
T d2pd4a1          72 SLYNS   76 (274)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.55  E-value=9.5e-15  Score=88.15  Aligned_cols=71  Identities=24%  Similarity=0.395  Sum_probs=56.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc---------chHHHHHHHHHHhhhccCCCCCCceEEEEe
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE---------KGNEVAALVEKENAKFHSNLGFPSAMFIRC   71 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~---------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   71 (85)
                      |+|+ ||+++|||+++|||++++++|+++|++|++.+++.+         .++...+++...            ...+.+
T Consensus         3 m~l~-gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~   69 (302)
T d1gz6a_           3 LRFD-GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR------------GGKAVA   69 (302)
T ss_dssp             CCCT-TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT------------TCEEEE
T ss_pred             cCcC-CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc------------cccccc
Confidence            7888 999999999999999999999999999999987642         344444444432            456778


Q ss_pred             cCCCHHH-HHHhhh
Q 034737           72 DVTNTKF-ALAFLR   84 (85)
Q Consensus        72 Dv~~~~~-~~~~~~   84 (85)
                      |+++.++ ++++++
T Consensus        70 d~~~~~~~~~~v~~   83 (302)
T d1gz6a_          70 NYDSVEAGEKLVKT   83 (302)
T ss_dssp             ECCCGGGHHHHHHH
T ss_pred             ccchHHHHHHHHHH
Confidence            9998888 777654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=4.7e-15  Score=87.17  Aligned_cols=68  Identities=32%  Similarity=0.321  Sum_probs=55.3

Q ss_pred             CC-CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            1 ME-LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         1 ~~-l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |. |+ ||+++|||+++|||+++++.|+++|++|++++|++++++.+.+     ...         +.+..+|+.+.+. 
T Consensus         1 m~~l~-gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~---------~~~~~~d~~~~~~~   65 (245)
T d2ag5a1           1 MGRLD-GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPG---------IQTRVLDVTKKKQI   65 (245)
T ss_dssp             CCTTT-TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STT---------EEEEECCTTCHHHH
T ss_pred             CCCCC-CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccC---------Cceeeeeccccccc
Confidence            44 78 9999999999999999999999999999999999866544322     122         7788889988877 


Q ss_pred             HHHhh
Q 034737           79 ALAFL   83 (85)
Q Consensus        79 ~~~~~   83 (85)
                      +..+.
T Consensus        66 ~~~~~   70 (245)
T d2ag5a1          66 DQFAN   70 (245)
T ss_dssp             HHHHH
T ss_pred             ccccc
Confidence            66654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.8e-14  Score=85.38  Aligned_cols=74  Identities=23%  Similarity=0.125  Sum_probs=55.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEE---ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVV---DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      .|+++|||+++|||++++++|+++|++++.+   .++.+..+.+.+...+..      ..+.++.++.+|++|+++ +++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~Dv~~~~~~~~~   75 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALA------CPPGSLETLQLDVRDSKSVAAA   75 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTT------CCTTSEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHh------ccCCceEEEeccccchHhhhhh
Confidence            5899999999999999999999999875444   566555555444443321      122349999999999999 988


Q ss_pred             hhhC
Q 034737           82 FLRL   85 (85)
Q Consensus        82 ~~~~   85 (85)
                      ++++
T Consensus        76 ~~~~   79 (285)
T d1jtva_          76 RERV   79 (285)
T ss_dssp             HHTC
T ss_pred             hhhc
Confidence            7653

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=1.6e-13  Score=80.57  Aligned_cols=70  Identities=21%  Similarity=0.310  Sum_probs=56.3

Q ss_pred             CCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+ ||+++|||+++  |||+++++.|+++|++|++++|+++..+.+ +++......         ..++..|+++..+ .
T Consensus         3 L~-gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~   71 (258)
T d1qsga_           3 LS-GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGS---------DIVLQCDVAEDASID   71 (258)
T ss_dssp             TT-TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTC---------CCEEECCTTCHHHHH
T ss_pred             CC-CCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCC---------cceeecccchHHHHH
Confidence            56 99999999998  899999999999999999999987654444 444444433         6788999999888 7


Q ss_pred             HHhh
Q 034737           80 LAFL   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ..+.
T Consensus        72 ~~~~   75 (258)
T d1qsga_          72 TMFA   75 (258)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.46  E-value=5.6e-14  Score=82.82  Aligned_cols=70  Identities=19%  Similarity=0.188  Sum_probs=54.1

Q ss_pred             CCCCcEEEEecC--CChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGG--ASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+ ||+++|||+  ++|||++++++|+++|++|++++++.++...   .+.+...        .+...+++|++++++ .
T Consensus         4 l~-gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~~--------~~~~~~~~dv~~~~~~~   71 (268)
T d2h7ma1           4 LD-GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRLP--------AKAPLLELDVQNEEHLA   71 (268)
T ss_dssp             TT-TCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTSS--------SCCCEEECCTTCHHHHH
T ss_pred             CC-CCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHcC--------CceeeEeeecccccccc
Confidence            56 999999994  5789999999999999999999998765422   2222211        227789999999988 8


Q ss_pred             HHhhh
Q 034737           80 LAFLR   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      .+++.
T Consensus        72 ~~~~~   76 (268)
T d2h7ma1          72 SLAGR   76 (268)
T ss_dssp             HHHHH
T ss_pred             cccch
Confidence            77654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.41  E-value=3.5e-13  Score=78.55  Aligned_cols=55  Identities=25%  Similarity=0.431  Sum_probs=45.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      |+ ||+++|||+++|||++++++|+++|++|++++|+++.++..         .         ..++.+|+++.
T Consensus         2 Lk-gK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~---------~---------~~~~~~Dv~~~   56 (234)
T d1o5ia_           2 IR-DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---------G---------HRYVVCDLRKD   56 (234)
T ss_dssp             CT-TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---------C---------SEEEECCTTTC
T ss_pred             CC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc---------C---------CcEEEcchHHH
Confidence            56 99999999999999999999999999999999987543321         1         45678898763

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.41  E-value=7e-13  Score=78.52  Aligned_cols=78  Identities=21%  Similarity=0.120  Sum_probs=55.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhcc---------CCCCCCceEEEEecCCCH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFH---------SNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~Dv~~~   76 (85)
                      .+++|||+++|||++++++|++.|++|++++++ .+..+.+.+++...++...         .......+..+.+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            489999999999999999999999999998765 4567778888876654320         000111233456678989


Q ss_pred             HH-HHHhhh
Q 034737           77 KF-ALAFLR   84 (85)
Q Consensus        77 ~~-~~~~~~   84 (85)
                      ++ ++++++
T Consensus        83 ~~v~~~~~~   91 (284)
T d1e7wa_          83 TRCAELVAA   91 (284)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            88 888764

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.40  E-value=6.8e-13  Score=77.89  Aligned_cols=62  Identities=26%  Similarity=0.348  Sum_probs=50.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      .++||||+++|||++++++|+++|++|++++|+.++ .+.+.+++...+...        ..++.+|+.+.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~   64 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGS--------AVLCKGDLSLS   64 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTC--------EEEEECCCSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCc--------eEEEecccccc
Confidence            489999999999999999999999999999998654 567777777665432        67777776553

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.34  E-value=1.5e-13  Score=80.87  Aligned_cols=62  Identities=21%  Similarity=0.120  Sum_probs=50.1

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +++|||+++|||++++++|+++|++|++++|+.+..+++....               ..++.+|+++.++ ++++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~---------------~~~~~~dv~~~~~~~~~~~~   64 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA---------------ETYPQLKPMSEQEPAELIEA   64 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH---------------HHCTTSEECCCCSHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh---------------CcEEEeccCCHHHHHHHHHH
Confidence            7999999999999999999999999999999988776654322               1234678888888 777654

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.30  E-value=4.8e-12  Score=73.25  Aligned_cols=56  Identities=45%  Similarity=0.604  Sum_probs=46.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      .|++||||+++|||++++++|+++|++|++++|+++.            ..         +..+++|+++... ..+.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------------~~---------~~~~~~d~~~~~~~~~~~   57 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------ED---------LIYVEGDVTREEDVRRAV   57 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------------SS---------SEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------------cc---------ceEeeccccchhhhHHHH
Confidence            4899999999999999999999999999999998642            11         5677888887766 5554

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.27  E-value=6.1e-12  Score=76.66  Aligned_cols=68  Identities=19%  Similarity=0.107  Sum_probs=48.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-----hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-----GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      |.+||||++|.||.+++++|++.|+.|++++|....     .+....+.....         +++.++++|++|.++ ++
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~Dl~d~~~~~~   72 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCN---------PKFHLHYGDLSDTSNLTR   72 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------------CCEEECCCCSSCHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcC---------CCeEEEEeecCCHHHHHH
Confidence            789999999999999999999999999999986532     222222222222         238999999999999 88


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      .+.
T Consensus        73 ~~~   75 (357)
T d1db3a_          73 ILR   75 (357)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            775

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.27  E-value=4.7e-12  Score=76.54  Aligned_cols=68  Identities=21%  Similarity=0.099  Sum_probs=54.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +|.++|||++|.||.++++.|+++|++|++++|+........+.... ..         .+.++.+|++|++. .+++.
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-~~---------~i~~~~~Dl~d~~~l~~~~~   76 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV-AD---------GMQSEIGDIRDQNKLLESIR   76 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT-TT---------TSEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc-cc---------CCeEEEeeccChHhhhhhhh
Confidence            89999999999999999999999999999999987654443322211 11         28999999999998 77654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=3.8e-12  Score=72.47  Aligned_cols=63  Identities=16%  Similarity=0.023  Sum_probs=52.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .|.++|||++++||.+++++|+++|++|+++.|++++....               ....+.++.+|++|+++ .++++
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~---------------~~~~~~~~~gD~~d~~~l~~al~   66 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---------------GPRPAHVVVGDVLQAADVDKTVA   66 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---------------SCCCSEEEESCTTSHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc---------------cccccccccccccchhhHHHHhc
Confidence            45799999999999999999999999999999998764321               11228899999999999 88765

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.23  E-value=1.7e-11  Score=73.24  Aligned_cols=67  Identities=19%  Similarity=0.076  Sum_probs=50.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH-HHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN-EVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      |.++|||++|.||++++++|+++|++|+.++|...... ...+.+. ...+         +.++.+|++|.+. .+.+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~---------~~~~~~Dl~d~~~~~~~~~   69 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGD---------IQYEDGDMADACSVQRAVI   69 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGG---------EEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCC---------cEEEEccccChHHhhhhhc
Confidence            68999999999999999999999999999998754311 1111111 1122         8999999999988 77654

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.22  E-value=2.2e-11  Score=73.70  Aligned_cols=72  Identities=14%  Similarity=0.020  Sum_probs=54.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +||.++|||++|.||.+++++|+++|++|+++.|+.++.....+........       ....++..|+.+..+ .+++.
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG-------RFETAVVEDMLKQGAYDEVIK   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTT-------TEEEEECSCTTSTTTTTTTTT
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccc-------cccEEEeccccchhhhhhhcc
Confidence            5899999999999999999999999999999999886655554433222211       114557789988877 66543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.18  E-value=9.9e-11  Score=70.78  Aligned_cols=68  Identities=26%  Similarity=0.238  Sum_probs=51.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      |++||||++|.||.+++++|+++|++|+++++.... .......-......         +.++++|+.|.+. +.++.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~---------v~~~~~Dl~d~~~l~~~~~   71 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHH---------IPFYEVDLCDRKGLEKVFK   71 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSC---------CCEEECCTTCHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccC---------CeEEEeecCCHHHHHHHHh
Confidence            689999999999999999999999999999864432 22222221112222         8899999999998 87764

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.16  E-value=1.7e-10  Score=68.84  Aligned_cols=66  Identities=20%  Similarity=0.248  Sum_probs=49.5

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH-HHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE-VAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .+||||++|.||.+++++|+++|++|+++++-...... ....+. ...+         +.++.+|+.+.++ .++++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~---------~~~i~~Di~~~~~l~~~~~   69 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGN---------FEFVHGDIRNKNDVTRLIT   69 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCC---------CEEEECCTTCHHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCC---------cEEEEcccCCHHHHHHHHH
Confidence            48999999999999999999999999998754322222 222222 2233         8999999999998 87764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.16  E-value=1.2e-10  Score=70.18  Aligned_cols=67  Identities=22%  Similarity=0.338  Sum_probs=50.9

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHH-HhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK-ENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .++|||++|.||.+++++|+++|++|++++|.............. ...+         +.++++|++|.+. .++++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~d~~~l~~~~~   70 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKH---------PTFVEGDIRNEALMTEILH   70 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSC---------CEEEECCTTCHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCC---------CEEEEeecCCHHHHHHHHh
Confidence            499999999999999999999999999998754332222222222 1222         8999999999999 88776

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.16  E-value=3.6e-11  Score=71.45  Aligned_cols=41  Identities=32%  Similarity=0.460  Sum_probs=37.0

Q ss_pred             CCCCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCccc
Q 034737            1 MELKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         1 ~~l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      |+|+ ||++||||+++  |||++++++|+++|++|++++|++..
T Consensus         4 ~~L~-gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           4 IDLR-GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             CCCT-TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             cCCC-CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            5788 99999999875  99999999999999999999997654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.15  E-value=2.2e-10  Score=70.21  Aligned_cols=70  Identities=24%  Similarity=0.224  Sum_probs=50.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc----------------chHHHHHHHHHHhhhccCCCCCCceEEE
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE----------------KGNEVAALVEKENAKFHSNLGFPSAMFI   69 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~----------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~   69 (85)
                      |+.++|||++|.||.+++++|++.|+.|+++|+...                ........+.....        .++.++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~i~~~   72 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG--------KSIELY   72 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC--------CCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcC--------CCcEEE
Confidence            578999999999999999999999999999974211                11222222222111        128999


Q ss_pred             EecCCCHHH-HHHhh
Q 034737           70 RCDVTNTKF-ALAFL   83 (85)
Q Consensus        70 ~~Dv~~~~~-~~~~~   83 (85)
                      .+|++|.+. +++++
T Consensus        73 ~~Dl~d~~~l~~~~~   87 (393)
T d1i24a_          73 VGDICDFEFLAESFK   87 (393)
T ss_dssp             ESCTTSHHHHHHHHH
T ss_pred             EccCCCHHHHHHHHH
Confidence            999999999 88765

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=9.7e-11  Score=70.51  Aligned_cols=69  Identities=16%  Similarity=0.021  Sum_probs=48.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-----hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-----GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      |++||||++|.||.+++++|+++|++|+.++|..+.     .+...........        ..+.++.+|++|++. ..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~Dl~d~~~~~~   73 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE--------GNMKLHYGDLTDSTCLVK   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------------CEEEEECCTTCHHHHHH
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhcc--------CCcEEEEeecCCchhhHH
Confidence            456999999999999999999999999999986432     2222111111111        128999999999998 87


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      ++.
T Consensus        74 ~~~   76 (347)
T d1t2aa_          74 IIN   76 (347)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            764

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.12  E-value=3.2e-11  Score=70.11  Aligned_cols=35  Identities=23%  Similarity=0.414  Sum_probs=33.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ||+++|||+++|||++++++|+++|++|+++++++
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~   36 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVE   36 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            89999999999999999999999999999998754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.09  E-value=1.4e-10  Score=69.48  Aligned_cols=69  Identities=19%  Similarity=0.033  Sum_probs=49.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-----chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-----KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      |.+||||++|.||.++++.|+++|++|++++|..+     +...........        ....+.++.+|+++.++ ..
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~Di~~~~~~~~   73 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--------NKALMKLHYADLTDASSLRR   73 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------------CCEEEEECCTTCHHHHHH
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc--------cccceEEEEccccCHHHHHH
Confidence            78999999999999999999999999999998543     121211111111        11227899999999988 77


Q ss_pred             Hhh
Q 034737           81 AFL   83 (85)
Q Consensus        81 ~~~   83 (85)
                      .++
T Consensus        74 ~~~   76 (339)
T d1n7ha_          74 WID   76 (339)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=5.1e-10  Score=67.45  Aligned_cols=68  Identities=25%  Similarity=0.236  Sum_probs=49.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecC------ccchHHHHHHHHH-HhhhccCCCCCCceEEEEecCCCHHH-
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLS------EEKGNEVAALVEK-ENAKFHSNLGFPSAMFIRCDVTNTKF-   78 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~------~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~-   78 (85)
                      |.+||||++|.||.+++++|+++|+.|+++++.      ........+.+.. ...+         +.++++|++|.+. 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~d~~~l   73 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRS---------VEFEEMDILDQGAL   73 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCC---------CEEEECCTTCHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCC---------cEEEEeeccccccc
Confidence            578999999999999999999999999998752      1112222222222 2223         8999999999998 


Q ss_pred             HHHhh
Q 034737           79 ALAFL   83 (85)
Q Consensus        79 ~~~~~   83 (85)
                      ++++.
T Consensus        74 ~~~~~   78 (346)
T d1ek6a_          74 QRLFK   78 (346)
T ss_dssp             HHHHH
T ss_pred             ccccc
Confidence            77654

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.07  E-value=1.2e-10  Score=67.89  Aligned_cols=34  Identities=26%  Similarity=0.423  Sum_probs=32.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      |+++|||+++|||++++++|++.|++|+++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~   35 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD   35 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            6999999999999999999999999999999875

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.05  E-value=5.1e-10  Score=65.94  Aligned_cols=68  Identities=21%  Similarity=0.180  Sum_probs=51.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH--HHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN--EVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      +.++|||++|.||.+++++|+++|++|+++.|+.....  ............         +.++.+|+.|.+. .+.+.
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~---------v~~v~~d~~d~~~~~~~~~   74 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLG---------AKLIEASLDDHQRLVDALK   74 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTT---------CEEECCCSSCHHHHHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCC---------cEEEEeecccchhhhhhcc
Confidence            45999999999999999999999999999999764322  211111112222         8899999999998 77664

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.00  E-value=7.6e-10  Score=66.84  Aligned_cols=65  Identities=15%  Similarity=0.047  Sum_probs=50.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH--HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF--ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~--~~~~   82 (85)
                      .|+++|||++|.||.+++++|+++|++|+++.|+......  ..+. ....         +.++++|+.|..+  .+++
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~-~~~~---------v~~~~gD~~d~~~~~~~a~   69 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ-AIPN---------VTLFQGPLLNNVPLMDTLF   69 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH-TSTT---------EEEEESCCTTCHHHHHHHH
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc-ccCC---------CEEEEeeCCCcHHHHHHHh
Confidence            6899999999999999999999999999999998765432  1221 1122         8899999998654  4444

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.98  E-value=2.6e-09  Score=62.35  Aligned_cols=69  Identities=16%  Similarity=0.119  Sum_probs=51.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH--HHHHHHH-hhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV--AALVEKE-NAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~--~~~l~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      .|.++|||++|.||+++++.|++.|++|++++|+.......  ...+... ...         +.++.+|+.+... .+.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~~~~~~~~~~   73 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASG---------ANIVHGSIDDHASLVEA   73 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTT---------CEEECCCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCC---------cEEEEeecccchhhhhh
Confidence            57799999999999999999999999999999976542221  1122211 122         7889999999988 766


Q ss_pred             hh
Q 034737           82 FL   83 (85)
Q Consensus        82 ~~   83 (85)
                      +.
T Consensus        74 ~~   75 (307)
T d1qyca_          74 VK   75 (307)
T ss_dssp             HH
T ss_pred             hh
Confidence            54

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.95  E-value=1.3e-09  Score=61.85  Aligned_cols=62  Identities=18%  Similarity=0.155  Sum_probs=48.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCE--EEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVF--VTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~--v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++++|||++|+||++++++|+++|+.  |+.+.|+++.....       ...         +.++.+|+++.++ .++++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-------~~~---------~~~~~~d~~~~~~~~~~~~   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGE---------ADVFIGDITDADSINPAFQ   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCC---------TTEEECCTTSHHHHHHHHT
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-------cCC---------cEEEEeeeccccccccccc
Confidence            58999999999999999999999965  55567776533221       122         7899999999999 88765


Q ss_pred             h
Q 034737           84 R   84 (85)
Q Consensus        84 ~   84 (85)
                      .
T Consensus        68 ~   68 (252)
T d2q46a1          68 G   68 (252)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.95  E-value=2.2e-09  Score=59.46  Aligned_cols=49  Identities=29%  Similarity=0.349  Sum_probs=42.7

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAK   56 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~   56 (85)
                      .+.|+||+++||+++++.|++.|++|++.+|++++++.+.+++......
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~   50 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGD   50 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC
Confidence            3567788899999999999999999999999999999999888766543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.91  E-value=4.1e-09  Score=63.37  Aligned_cols=67  Identities=22%  Similarity=0.075  Sum_probs=49.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHH----H-HhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE----K-ENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~----~-~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      .|++||||++|.||.+++++|.++|++|+++++...........+.    . ....         +.++.+|+.|... .
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~~d~~~~~   86 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN---------FKFIQGDIRNLDDCN   86 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTT---------EEEEECCTTSHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCC---------eeEEeeccccccccc
Confidence            5799999999999999999999999999999874432222211111    1 1222         8899999999877 5


Q ss_pred             HH
Q 034737           80 LA   81 (85)
Q Consensus        80 ~~   81 (85)
                      ..
T Consensus        87 ~~   88 (341)
T d1sb8a_          87 NA   88 (341)
T ss_dssp             HH
T ss_pred             cc
Confidence            44

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.91  E-value=1.4e-08  Score=61.95  Aligned_cols=77  Identities=26%  Similarity=0.246  Sum_probs=52.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHh-CCCEEEEEecC---------ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            6 GLSAFVTGGASGIGRALSLALAG-KGVFVTVVDLS---------EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~-~g~~v~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      ++.++|||++|.||.+++++|++ .|++|+++|+-         .+..+.....+..... ..+......+.++.+|++|
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Di~d   80 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDG-PKPPWADRYAALEVGDVRN   80 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCS-SCCTTTTCCCEEEESCTTC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhcc-ccccccccceEEEECcccC
Confidence            46799999999999999999986 78999998741         1223333322322111 1111223347899999999


Q ss_pred             HHH-HHHhh
Q 034737           76 TKF-ALAFL   83 (85)
Q Consensus        76 ~~~-~~~~~   83 (85)
                      .+. +++++
T Consensus        81 ~~~l~~~~~   89 (383)
T d1gy8a_          81 EDFLNGVFT   89 (383)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHhhhhhh
Confidence            999 88775

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.86  E-value=1.7e-09  Score=62.55  Aligned_cols=34  Identities=29%  Similarity=0.371  Sum_probs=31.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ..++|||+++|||++++++|+++|++|++++|++
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~   36 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA   36 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence            4569999999999999999999999999999875

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.82  E-value=4.7e-09  Score=63.01  Aligned_cols=57  Identities=18%  Similarity=0.197  Sum_probs=44.2

Q ss_pred             EEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      .++|||++|.||.+++++|+.+| ++|+++++.........              ..+++.++++|+++.+.
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~--------------~~~~~~~i~~Di~~~~~   59 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------------NHPHFHFVEGDISIHSE   59 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT--------------TCTTEEEEECCTTTCSH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc--------------cCCCeEEEECccCChHH
Confidence            48999999999999999999998 58999888654332221              12338999999988755

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.80  E-value=9e-09  Score=62.23  Aligned_cols=63  Identities=16%  Similarity=0.139  Sum_probs=46.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      ++.++||||+|.||.+++++|+++|++|+++++......      .....         ...+..+|+.+.+. .++++
T Consensus        15 nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~~~---------~~~~~~~D~~~~~~~~~~~~   78 (363)
T d2c5aa1          15 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMF---------CDEFHLVDLRVMENCLKVTE   78 (363)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGGGT---------CSEEEECCTTSHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhhcc---------cCcEEEeechhHHHHHHHhh
Confidence            778999999999999999999999999999987543210      00011         15677788888877 66544

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.9e-09  Score=62.13  Aligned_cols=64  Identities=22%  Similarity=0.251  Sum_probs=47.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      |+ +|.++|||++|.||.+++++|+++|.  +|+++.|++.....      .....         +....+|+.+.++ .
T Consensus        12 m~-~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~---------i~~~~~D~~~~~~~~   75 (232)
T d2bkaa1          12 MQ-NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKN---------VNQEVVDFEKLDDYA   75 (232)
T ss_dssp             HT-CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGG---------CEEEECCGGGGGGGG
T ss_pred             CC-CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccce---------eeeeeeccccccccc
Confidence            55 78999999999999999999999985  79999997643221      01112         6777788887766 5


Q ss_pred             HHh
Q 034737           80 LAF   82 (85)
Q Consensus        80 ~~~   82 (85)
                      +.+
T Consensus        76 ~~~   78 (232)
T d2bkaa1          76 SAF   78 (232)
T ss_dssp             GGG
T ss_pred             ccc
Confidence            443

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.76  E-value=1.1e-08  Score=61.72  Aligned_cols=43  Identities=14%  Similarity=0.146  Sum_probs=36.5

Q ss_pred             CcEEEEec--CCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            6 GLSAFVTG--GASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         6 ~~~~litG--~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      +|++||||  +++|||+++++.|+++|++|++.+++.........
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~   46 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKN   46 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHH
Confidence            79999999  55899999999999999999999988765444443

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.73  E-value=4e-09  Score=64.20  Aligned_cols=65  Identities=17%  Similarity=0.118  Sum_probs=45.8

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEE-EEEecCccc--hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFV-TVVDLSEEK--GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL   83 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v-~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~   83 (85)
                      .+||||++|.||.+++++|++.|+.+ +++++....  ..... .+          ....++.++++|++|++. ..+++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~-~~----------~~~~~~~~~~~Dl~d~~~l~~~~~   70 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS-DI----------SESNRYNFEHADICDSAEITRIFE   70 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT-TT----------TTCTTEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHH-hh----------hhcCCcEEEEccCCCHHHHHHHHH
Confidence            48999999999999999999999975 445543211  11110 01          122348999999999998 87764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.73  E-value=2.1e-09  Score=64.80  Aligned_cols=68  Identities=22%  Similarity=0.154  Sum_probs=45.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEE--EEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVT--VVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF   82 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~   82 (85)
                      .|.+|||||+|.||.+++++|++.|+.|.  +.++.......  ..+..        ....++.++.+|+.|.+. ..++
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~--~~~~~--------~~~~~i~~~~~Di~d~~~~~~~~   71 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK--ANLEA--------ILGDRVELVVGDIADAELVDKLA   71 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG--GGTGG--------GCSSSEEEEECCTTCHHHHHHHH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccH--HHHHH--------hhcCCeEEEEccCCCHHHHHHHH
Confidence            35799999999999999999999998644  44432111000  00000        011238999999999998 7765


Q ss_pred             h
Q 034737           83 L   83 (85)
Q Consensus        83 ~   83 (85)
                      .
T Consensus        72 ~   72 (346)
T d1oc2a_          72 A   72 (346)
T ss_dssp             T
T ss_pred             h
Confidence            4

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.58  E-value=1.6e-07  Score=49.79  Aligned_cols=59  Identities=24%  Similarity=0.342  Sum_probs=48.4

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      .++|.|+ +.+|+.+++.|...|+.|++++.+++..+.+.+.+     .         ..++.+|.++++. +++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~---------~~vi~Gd~~~~~~l~~~   61 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----D---------ALVINGDCTKIKTLEDA   61 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----S---------SEEEESCTTSHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----h---------hhhccCcccchhhhhhc
Confidence            5889987 99999999999999999999999998777654422     1         6778899999887 654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.40  E-value=1e-06  Score=51.02  Aligned_cols=46  Identities=24%  Similarity=0.374  Sum_probs=36.1

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc---chHHHHHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE---KGNEVAALVEKE   53 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~---~~~~~~~~l~~~   53 (85)
                      .++|||++|.||.+++++|..+|+.|+.++|++-   ....+.+.+...
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~   51 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEK   51 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechhccCCCHHHHHHHHHHc
Confidence            4899999999999999999999999999998652   333444444433

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=3.1e-07  Score=54.61  Aligned_cols=33  Identities=39%  Similarity=0.382  Sum_probs=30.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      |.++|||++|.||++++++|+++|++|+++++.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~   34 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF   34 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence            679999999999999999999999999999863

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.30  E-value=1.5e-06  Score=47.31  Aligned_cols=42  Identities=24%  Similarity=0.230  Sum_probs=37.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      .|.++|.|+ |.+|+.+++.|.++|++|++++|+.++++.+.+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~   43 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA   43 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHh
Confidence            578888876 999999999999999999999999988777655

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.27  E-value=8e-07  Score=52.81  Aligned_cols=66  Identities=26%  Similarity=0.277  Sum_probs=42.3

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCE------EEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVF------VTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL   80 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~------v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~   80 (85)
                      .++|||++|.||.+++++|+++|+.      ++.+++........  .+...       .....+.++.+|+.+... ..
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~--~~~~~-------~~~~~~~~~~~d~~~~~~~~~   72 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA--NLAPV-------DADPRLRFVHGDIRDAGLLAR   72 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGG--GGGGG-------TTCTTEEEEECCTTCHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHh--Hhhhh-------hcCCCeEEEEeccccchhhhc
Confidence            4899999999999999999999874      44454332111110  00000       011238899999998887 65


Q ss_pred             Hh
Q 034737           81 AF   82 (85)
Q Consensus        81 ~~   82 (85)
                      ..
T Consensus        73 ~~   74 (322)
T d1r6da_          73 EL   74 (322)
T ss_dssp             HT
T ss_pred             cc
Confidence            43

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.26  E-value=2.2e-06  Score=41.60  Aligned_cols=43  Identities=23%  Similarity=0.230  Sum_probs=37.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++.+++|+|+++|.|...++.....|++|+.+.+++++.+.+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            3778999999999999999988889999999999988776654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.21  E-value=8.5e-07  Score=52.33  Aligned_cols=34  Identities=21%  Similarity=0.307  Sum_probs=30.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      .|.++|||++|.||.+++++|+++|+.++++++.
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            4679999999999999999999999998877654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.17  E-value=1.5e-06  Score=48.87  Aligned_cols=35  Identities=11%  Similarity=0.042  Sum_probs=30.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~   40 (85)
                      .|.++|||++|.||++++++|+++|+  +|+...|++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~   38 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA   38 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCc
Confidence            57899999999999999999999997  566666654

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.12  E-value=1.3e-06  Score=46.07  Aligned_cols=59  Identities=24%  Similarity=0.174  Sum_probs=44.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |.++|.|+ +.+|+.+++.|.+.|+.|++++.+++..+.+.+..               ...+.+|.++++. +++
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~---------------~~~~~gd~~~~~~l~~a   60 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYA---------------THAVIANATEENELLSL   60 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTC---------------SEEEECCTTCTTHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhC---------------Ccceeeecccchhhhcc
Confidence            35677766 78999999999999999999999987766653211               3456678888776 543

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=6.1e-05  Score=41.54  Aligned_cols=68  Identities=16%  Similarity=0.266  Sum_probs=49.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      ++. +|.++|.|+ +|.+++++..|...|. ++.++.|+++..+++............       ......|+.+.+.
T Consensus        15 ~l~-~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~   83 (182)
T d1vi2a1          15 DIK-GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD-------CVVTVTDLADQQA   83 (182)
T ss_dssp             CCT-TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-------CEEEEEETTCHHH
T ss_pred             CcC-CCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcC-------cceEeeecccccc
Confidence            356 899999988 7999999999999998 588889998877776654433322211       3455667776665

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.09  E-value=2e-06  Score=50.05  Aligned_cols=30  Identities=47%  Similarity=0.574  Sum_probs=27.0

Q ss_pred             EEEecCCChHHHHHHHHHHhCCC-EEEEEec
Q 034737            9 AFVTGGASGIGRALSLALAGKGV-FVTVVDL   38 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~   38 (85)
                      +||||++|.||.+++++|+++|+ .|+++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~   32 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEEC
Confidence            79999999999999999999996 6888763

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.6e-05  Score=43.46  Aligned_cols=43  Identities=26%  Similarity=0.298  Sum_probs=36.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      +.++.+++|+|+++++|...++.....|++|+++++++++.+.
T Consensus        26 ~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~   68 (174)
T d1yb5a2          26 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI   68 (174)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEEeccccccccccccccccCccccccccccccccc
Confidence            4458899999999999999999998999999999887755443

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.98  E-value=1.5e-05  Score=43.97  Aligned_cols=44  Identities=25%  Similarity=0.240  Sum_probs=37.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      +++|.+++|+|+++++|...++.....|++|+.+.+++++.+.+
T Consensus        27 v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~   70 (182)
T d1v3va2          27 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL   70 (182)
T ss_dssp             CCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHH
Confidence            34588999999999999999999999999999999887654433

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=97.94  E-value=7.1e-06  Score=47.51  Aligned_cols=31  Identities=23%  Similarity=0.423  Sum_probs=25.6

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      .+||||++|.||.++++.|.++|..| .+++.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v-~~~~~   32 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLI-ALDVH   32 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEE-EECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEE-EEECC
Confidence            49999999999999999999988644 44443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.93  E-value=1.5e-05  Score=43.60  Aligned_cols=45  Identities=16%  Similarity=0.142  Sum_probs=38.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++++.+++|+|+++++|...++.....|++|+++++++++.+.+.
T Consensus        26 l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~   70 (179)
T d1qora2          26 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL   70 (179)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred             CCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH
Confidence            445889999999999999999998889999999999987765543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.91  E-value=2.3e-05  Score=42.90  Aligned_cols=45  Identities=22%  Similarity=0.214  Sum_probs=38.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +.++.+++|+|+++++|...++.....|++|+.+++++++.+.+.
T Consensus        25 ~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~   69 (171)
T d1iz0a2          25 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL   69 (171)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH
T ss_pred             CCCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc
Confidence            446889999999999999999988889999999998877655443

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.84  E-value=5.9e-05  Score=40.36  Aligned_cols=62  Identities=23%  Similarity=0.135  Sum_probs=48.9

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      +++|.|. +.+|..+++.|...|..+++++.+++............  .         +.++.+|.++++. +++
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~--~---------~~vi~Gd~~d~~~L~~a   67 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--N---------ADVIPGDSNDSSVLKKA   67 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--T---------CEEEESCTTSHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC--C---------cEEEEccCcchHHHHHh
Confidence            5778877 78999999999999999999999987655555544322  2         7889999999887 554

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=3.5e-05  Score=42.14  Aligned_cols=48  Identities=25%  Similarity=0.396  Sum_probs=41.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      +. +|.++|.|+ ||-+++++..|...|.+|.++.|+.++.+.+.+.+..
T Consensus        16 ~~-~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~   63 (170)
T d1nyta1          16 RP-GLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH   63 (170)
T ss_dssp             CT-TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG
T ss_pred             CC-CCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhh
Confidence            45 899999987 8889999999999999999999999888887776654

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.76  E-value=2.4e-05  Score=42.92  Aligned_cols=42  Identities=21%  Similarity=0.278  Sum_probs=36.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      +.+|.+++|+|+++++|...++.....|++++++++++++.+
T Consensus        23 ~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~   64 (183)
T d1pqwa_          23 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE   64 (183)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred             CCCCCEEEEECCCCCcccccchhhccccccceeeeccccccc
Confidence            345789999999999999999998889999999988775544

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=5.8e-05  Score=41.64  Aligned_cols=42  Identities=24%  Similarity=0.237  Sum_probs=36.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +.+++|+|+++|+|...++.....|++|+.+.+++++.+.+.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~   73 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH
Confidence            348999999999999999988899999999999988765543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.71  E-value=3.9e-05  Score=42.38  Aligned_cols=42  Identities=21%  Similarity=0.247  Sum_probs=37.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +.+++|+|+++|.|...++.....|++|+.+.+++++.+.+.
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~   73 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR   73 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH
Confidence            678999999999999999988899999999999888766554

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.68  E-value=3.7e-05  Score=42.09  Aligned_cols=43  Identities=23%  Similarity=0.253  Sum_probs=36.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      +.+++|+|+++|+|...++.-...|++|+.+.+++++.+.+.+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~   66 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ   66 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh
Confidence            4579999999999999998888889999999999887666543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.65  E-value=9e-05  Score=40.23  Aligned_cols=43  Identities=26%  Similarity=0.301  Sum_probs=35.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      .++.+++|.|+ +++|...+......|++|+++++++++.+.+.
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~   68 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM   68 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh
Confidence            35789999986 89999988887788999999999988776543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.60  E-value=0.00011  Score=39.85  Aligned_cols=46  Identities=26%  Similarity=0.430  Sum_probs=39.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l   50 (85)
                      +. ++.++|.|+ |.+|..+++.|...|+ ++.++.|+.++++.+.+.+
T Consensus        22 l~-~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~   68 (159)
T d1gpja2          22 LH-DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL   68 (159)
T ss_dssp             CT-TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             cc-cCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh
Confidence            56 889999987 9999999999999998 5888889888777776655

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.57  E-value=0.00016  Score=39.13  Aligned_cols=42  Identities=29%  Similarity=0.315  Sum_probs=35.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++.+++|.| ++++|...+..+...|++|+++++++++.+.+.
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~   67 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK   67 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH
Confidence            477899997 589999999988889999999999987665544

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.57  E-value=0.00014  Score=38.72  Aligned_cols=38  Identities=16%  Similarity=0.220  Sum_probs=33.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG   43 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~   43 (85)
                      -+.+.|.|+.+.+|..+++.|.+.|++|.+.+++....
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~   46 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV   46 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence            46788999889999999999999999999999987543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.53  E-value=0.00019  Score=38.68  Aligned_cols=42  Identities=21%  Similarity=0.383  Sum_probs=35.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      .++.+++|.|+ +++|...+..+...|++|+++++++++.+.+
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            35788999876 9999999988888999999999988766544

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.52  E-value=0.00014  Score=39.79  Aligned_cols=43  Identities=16%  Similarity=0.113  Sum_probs=35.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      +++|.+++|.|+ +++|...+......|+ +|+++++++++.+.+
T Consensus        26 ~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a   69 (182)
T d1vj0a2          26 SFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA   69 (182)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred             CCCCCEEEEECC-Cccchhheeccccccccccccccccccccccc
Confidence            334789999986 8999999999999998 799999988766544

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=0.00039  Score=37.56  Aligned_cols=43  Identities=26%  Similarity=0.251  Sum_probs=35.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      +.+|.+++|.|+ +++|...++.....|++++++++++++.+.+
T Consensus        28 ~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a   70 (168)
T d1uufa2          28 AGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA   70 (168)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred             CCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH
Confidence            446889999986 8999999988888999999999888766433

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.44  E-value=0.00036  Score=38.48  Aligned_cols=52  Identities=23%  Similarity=0.187  Sum_probs=38.0

Q ss_pred             CCCCcE-EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHh
Q 034737            3 LKPGLS-AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKEN   54 (85)
Q Consensus         3 l~~~~~-~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~   54 (85)
                      +.+|.. ++++|+++++|...++.....|++|+++.++.+..+...+.+.+.+
T Consensus        26 ~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lG   78 (189)
T d1gu7a2          26 LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELG   78 (189)
T ss_dssp             CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHT
T ss_pred             CCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcc
Confidence            344554 5557999999999888888889999999887776666555554443

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=0.00044  Score=38.43  Aligned_cols=43  Identities=23%  Similarity=0.265  Sum_probs=35.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      |.+.|.|+ |-+|..++..++..|+.|++.|++++.++...+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i   47 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI   47 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhH
Confidence            46777877 77999999999999999999999987666554443

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.41  E-value=0.00036  Score=38.11  Aligned_cols=48  Identities=21%  Similarity=0.371  Sum_probs=40.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      ++ +|.++|.|+ ||.+++++..|...| +|.++.|+.++.+.+.+.+...
T Consensus        16 ~~-~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          16 VK-DKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             CC-SCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             cC-CCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            56 899999977 788999999998776 8999999999988888777643

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.39  E-value=0.00033  Score=37.96  Aligned_cols=40  Identities=28%  Similarity=0.228  Sum_probs=34.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      |++.|.|+ |.+|.+++..|.++|++|.+.+|+++..+...
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~   41 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ   41 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            57788877 88999999999999999999999987665544

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.38  E-value=0.00029  Score=38.50  Aligned_cols=48  Identities=15%  Similarity=0.192  Sum_probs=40.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      +. +|.++|-|+ ||-+++++..|...+.+|.++.|+.++++.+.+.+..
T Consensus        16 ~~-~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~   63 (171)
T d1p77a1          16 RP-NQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP   63 (171)
T ss_dssp             CT-TCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG
T ss_pred             CC-CCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhh
Confidence            44 889999876 7889999999999888999999999888888877653

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.38  E-value=0.00067  Score=37.05  Aligned_cols=45  Identities=27%  Similarity=0.451  Sum_probs=37.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~   48 (85)
                      ++++.+++|.|+ +|+|...+..+...|+ +|++++.++++++-+.+
T Consensus        27 ~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~   72 (176)
T d1d1ta2          27 VKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA   72 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh
Confidence            345789999986 8999999999999985 79999999887765443

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.37  E-value=0.00024  Score=36.15  Aligned_cols=37  Identities=22%  Similarity=0.335  Sum_probs=32.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++. +|.++|.|+ |.+|...++.|++.|++|++++...
T Consensus         9 ~l~-~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~   45 (113)
T d1pjqa1           9 QLR-DRDCLIVGG-GDVAERKARLLLEAGARLTVNALTF   45 (113)
T ss_dssp             CCB-TCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred             EeC-CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            567 999999988 6699999999999999998887654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.37  E-value=0.00018  Score=35.47  Aligned_cols=37  Identities=19%  Similarity=0.205  Sum_probs=32.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +++ +|.++|.|. +.-|.++++.|.++|++|++.|.+.
T Consensus         2 ~~~-~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~   38 (93)
T d2jfga1           2 DYQ-GKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRM   38 (93)
T ss_dssp             CCT-TCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSS
T ss_pred             CcC-CCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCc
Confidence            467 899999988 5569999999999999999998754

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.35  E-value=0.0019  Score=36.63  Aligned_cols=36  Identities=36%  Similarity=0.497  Sum_probs=30.6

Q ss_pred             CCCCCcEEEEecCC----------------ChHHHHHHHHHHhCCCEEEEEec
Q 034737            2 ELKPGLSAFVTGGA----------------SGIGRALSLALAGKGVFVTVVDL   38 (85)
Q Consensus         2 ~l~~~~~~litG~~----------------~gig~~~~~~l~~~g~~v~~~~~   38 (85)
                      +|. |+.++||+|+                |-.|.++++.+..+|++|.++..
T Consensus         3 dl~-g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g   54 (223)
T d1u7za_           3 DLK-HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSG   54 (223)
T ss_dssp             TTT-TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             ccC-CCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhc
Confidence            467 8888888875                56999999999999999988754

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=97.35  E-value=0.00043  Score=38.90  Aligned_cols=42  Identities=29%  Similarity=0.439  Sum_probs=35.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      +|. |++++|-| .|.+|..+++.|.+.|++|++.+.+......
T Consensus        24 ~L~-gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          24 SLD-GLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CST-TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCC-CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            467 89999987 4789999999999999999999988765544

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.00046  Score=37.31  Aligned_cols=42  Identities=29%  Similarity=0.342  Sum_probs=34.9

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      .++.+++|.|+ +++|...+..+...|+ +|+++++++.+++.+
T Consensus        25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a   67 (171)
T d1pl8a2          25 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA   67 (171)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH
Confidence            34778999976 9999999999999998 799999988766544

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.29  E-value=0.00094  Score=36.18  Aligned_cols=44  Identities=20%  Similarity=0.330  Sum_probs=35.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVA   47 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~   47 (85)
                      +++|.+++|.|+ +|+|...+..+...|+ +|+++++++++.+.+.
T Consensus        26 vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~   70 (176)
T d2jhfa2          26 VTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK   70 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH
Confidence            446889999988 7899999999998885 7888899887766543

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.26  E-value=0.00044  Score=37.29  Aligned_cols=44  Identities=20%  Similarity=0.261  Sum_probs=35.4

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVA   47 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~   47 (85)
                      .++.+++|.|+++++|..++..+...|+ .|+++++++++.+.+.
T Consensus        26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~   70 (170)
T d1jvba2          26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK   70 (170)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH
T ss_pred             CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH
Confidence            3578999999999999999988888884 7888888876554443

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.22  E-value=0.00046  Score=37.45  Aligned_cols=44  Identities=23%  Similarity=0.372  Sum_probs=37.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l   50 (85)
                      ++.++|-|+ ||.+++++..|...|+ +|.++.|+.++.+.+.+.+
T Consensus        17 ~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          17 NAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            677888877 8999999999999997 6889999998877776654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.20  E-value=0.00033  Score=36.35  Aligned_cols=57  Identities=23%  Similarity=0.109  Sum_probs=41.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA   81 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~   81 (85)
                      |+++|.|. +.+|+.+++.|.  +..+++++.+++..+....      ..         +.++.+|.++++. +++
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~------~~---------~~~i~Gd~~~~~~L~~a   58 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLR------SG---------ANFVHGDPTRVSDLEKA   58 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH------TT---------CEEEESCTTSHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh------cC---------ccccccccCCHHHHHHh
Confidence            46888876 778999999984  5667788888876554321      12         7788899999887 653

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.20  E-value=0.00065  Score=36.38  Aligned_cols=41  Identities=27%  Similarity=0.336  Sum_probs=34.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      ++.+++|.|+ +++|...+..+...|++|+++++++++.+.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            5778999875 8999999888889999999999888765544

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.10  E-value=0.001  Score=36.25  Aligned_cols=43  Identities=21%  Similarity=0.262  Sum_probs=35.5

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVA   47 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~   47 (85)
                      ++|.+++|.|+ +++|...+..+...|+ +|+++++++++++.+.
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~   69 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI   69 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH
Confidence            35789999986 8999999999988886 6888899887766554

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=97.08  E-value=0.001  Score=37.26  Aligned_cols=38  Identities=26%  Similarity=0.323  Sum_probs=31.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      |.|.+.+.++|.|+ +-.|.++|.+|.++|++|.+++++
T Consensus         1 ~~~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           1 LMMHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCCCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            34544667888876 777999999999999999999874

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.06  E-value=0.00044  Score=36.76  Aligned_cols=35  Identities=26%  Similarity=0.364  Sum_probs=31.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL   38 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~   38 (85)
                      ++. +|+++|.|| |.+|..-++.|++.|++|++++.
T Consensus        10 ~l~-gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          10 QLK-DKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CCT-TCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eeC-CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            467 999999998 66999999999999999998864

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=97.04  E-value=0.00072  Score=37.31  Aligned_cols=42  Identities=24%  Similarity=0.245  Sum_probs=34.3

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      .+.|.|+ |-+|..++..++..|++|++.|++++.++...+.+
T Consensus         6 ~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i   47 (186)
T d1wdka3           6 QAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA   47 (186)
T ss_dssp             SEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence            4667776 77999999999999999999999987766554443

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.00  E-value=0.0013  Score=35.22  Aligned_cols=38  Identities=21%  Similarity=0.212  Sum_probs=30.8

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      +.|.|. |-+|..+++.|.+.|++|++.+|+++..+.+.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~   40 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV   40 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHH
Confidence            444555 89999999999999999999999987655543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.98  E-value=0.0009  Score=36.45  Aligned_cols=43  Identities=16%  Similarity=0.028  Sum_probs=34.4

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVA   47 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~   47 (85)
                      +++.+++|.|+ +++|...+......|+ +|+++++++++.+.+.
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~   69 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK   69 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH
T ss_pred             CCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH
Confidence            35778999976 8999999999888997 6889998876655443

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.0019  Score=35.12  Aligned_cols=38  Identities=26%  Similarity=0.402  Sum_probs=34.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      .|. ||+++|.|- +-+|+.+|+.+...|++|++++.++-
T Consensus        21 ~l~-Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~   58 (163)
T d1li4a1          21 MIA-GKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPI   58 (163)
T ss_dssp             CCT-TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             eec-CCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccc
Confidence            356 999999976 58999999999999999999999873

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.94  E-value=0.0011  Score=35.16  Aligned_cols=33  Identities=21%  Similarity=0.101  Sum_probs=29.4

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      .+.|.|+ +.+|..++..|.+.|++|.+++|++.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            4777777 99999999999999999999999764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.90  E-value=0.0022  Score=36.63  Aligned_cols=45  Identities=27%  Similarity=0.386  Sum_probs=37.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      +|. |++++|-|. +.+|..+++.|.+.|++|++.+.+.........
T Consensus        36 ~l~-g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~   80 (230)
T d1leha1          36 SLE-GLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVA   80 (230)
T ss_dssp             CCT-TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCC-CCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHH
Confidence            366 889999866 889999999999999999999888766655444

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.90  E-value=0.0023  Score=33.89  Aligned_cols=40  Identities=18%  Similarity=0.327  Sum_probs=32.3

Q ss_pred             EEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHH
Q 034737            9 AFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~   49 (85)
                      +.+-|+ |.+|.++++.|++.| ++|.+.+|++++.+.+.++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            445555 899999999999877 8999999998877766554

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.87  E-value=0.0008  Score=36.98  Aligned_cols=42  Identities=17%  Similarity=0.022  Sum_probs=31.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEE-EEecCccchHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVT-VVDLSEEKGNEVAA   48 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~-~~~~~~~~~~~~~~   48 (85)
                      .+++|+|+++++|...++.....|++++ .+..++++...+.+
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~   74 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTS   74 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHH
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhh
Confidence            7899999999999999988888898644 45555554444443

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.86  E-value=0.0033  Score=34.18  Aligned_cols=43  Identities=21%  Similarity=0.267  Sum_probs=34.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVA   47 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~   47 (85)
                      ++|.+++|.|+ ++||...+......|+ .|++++.++++.+...
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~   70 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK   70 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH
Confidence            35789999975 9999999999999998 5777888877654433

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.85  E-value=0.0037  Score=34.03  Aligned_cols=43  Identities=28%  Similarity=0.342  Sum_probs=36.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      ++. ||.++|.|.+.-.|+.++..|..+|+.|.++.........
T Consensus        34 ~l~-GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~   76 (166)
T d1b0aa1          34 DTF-GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH   76 (166)
T ss_dssp             CCT-TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH
T ss_pred             ccc-cceEEEEeccccccHHHHHHHHHhhccccccccccchhHH
Confidence            466 9999999999999999999999999999888776655443

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.81  E-value=0.00097  Score=36.21  Aligned_cols=36  Identities=31%  Similarity=0.398  Sum_probs=31.8

Q ss_pred             CCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737           14 GASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus        14 ~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~   49 (85)
                      +.+-+|..++++|++.|++|.+.+|++++.+++.++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            458899999999999999999999999888777664

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.80  E-value=0.0038  Score=35.13  Aligned_cols=58  Identities=26%  Similarity=0.240  Sum_probs=41.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      .+.+|=.||+.|   .++..|++.|++|+++|.++.-++.+.+.+...+.+         +.++.+|+.+
T Consensus        42 ~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~---------i~~~~~d~~~   99 (251)
T d1wzna1          42 VRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLK---------IEFLQGDVLE   99 (251)
T ss_dssp             CCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------CEEEESCGGG
T ss_pred             CCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccccccc---------chheehhhhh
Confidence            567888998877   446678889999999999987777776665544333         5555555543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.79  E-value=0.0012  Score=36.48  Aligned_cols=39  Identities=33%  Similarity=0.363  Sum_probs=31.8

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      .+.|-|+ |.+|.+++..|...|++|.+.+|+++..+.+.
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            4667765 77999999999999999999999886655443

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.70  E-value=0.0019  Score=36.50  Aligned_cols=46  Identities=22%  Similarity=0.039  Sum_probs=36.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKEN   54 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~   54 (85)
                      ++.+|=.||+.|.   ++..|+++|.+|+++|.+++-++.+.+.....+
T Consensus        38 ~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~   83 (246)
T d1y8ca_          38 FDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQG   83 (246)
T ss_dssp             TTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTT
T ss_pred             CCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccC
Confidence            5788999988874   677888999999999999987777666555443

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.68  E-value=0.0038  Score=34.50  Aligned_cols=43  Identities=26%  Similarity=0.374  Sum_probs=32.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV   46 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~   46 (85)
                      +++|.+++|.|+ +++|...+......|+ +|++++.++++++.+
T Consensus        23 v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a   66 (195)
T d1kola2          23 VGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA   66 (195)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh
Confidence            345889999986 8999888887766776 788888887665544

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.67  E-value=0.0015  Score=35.47  Aligned_cols=40  Identities=20%  Similarity=0.283  Sum_probs=33.4

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      .+=+.|. +-+|..++++|++.|++|++.+|++++.+.+.+
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~   43 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA   43 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            3455555 889999999999999999999999988777654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.66  E-value=0.0046  Score=33.15  Aligned_cols=42  Identities=29%  Similarity=0.390  Sum_probs=32.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNE   45 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~   45 (85)
                      +++|.+++|.|+ +|+|...+..+...|+ .|+++++++++.+.
T Consensus        26 ~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~   68 (176)
T d2fzwa2          26 LEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR   68 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH
T ss_pred             CCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH
Confidence            446889999987 5899999888888886 56667777766543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.0038  Score=34.09  Aligned_cols=42  Identities=19%  Similarity=0.173  Sum_probs=36.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      ++. ||.++|.|.+.=.|+.++..|..+|+.|.+++.......
T Consensus        36 ~l~-Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          36 PIA-GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCT-TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             ccc-cceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            466 999999999999999999999999999999887665544

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.63  E-value=0.0017  Score=34.73  Aligned_cols=35  Identities=29%  Similarity=0.318  Sum_probs=29.9

Q ss_pred             CCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737           14 GASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus        14 ~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      |.+-+|..++++|++.|++|++.+|++++.+.+.+
T Consensus         7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            34889999999999999999999999877666544

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.62  E-value=0.0075  Score=33.74  Aligned_cols=63  Identities=14%  Similarity=0.165  Sum_probs=45.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      +++++..+|=.||+.|   .++..|++++++|+.+|.++..++.+.+.+...+..        ++.++..|+.+
T Consensus        13 ~~~~~~rILDiGcGtG---~~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~--------~~~~~~~d~~~   75 (234)
T d1xxla_          13 ECRAEHRVLDIGAGAG---HTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVE--------NVRFQQGTAES   75 (234)
T ss_dssp             TCCTTCEEEEESCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCC--------SEEEEECBTTB
T ss_pred             CCCCCCEEEEeCCcCc---HHHHHHHHhCCeEEEEeCChhhhhhhhhhhcccccc--------ccccccccccc
Confidence            3556888999998888   456677778899999999998777776666554321        16777777654

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.58  E-value=0.0021  Score=34.64  Aligned_cols=46  Identities=22%  Similarity=0.164  Sum_probs=37.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      +.++..+|..||+.|   ..+..|+++|++|+.+|.++...+.+.+...
T Consensus        18 ~~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~   63 (201)
T d1pjza_          18 VVPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERG   63 (201)
T ss_dssp             CCTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHC
T ss_pred             CCCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhc
Confidence            345889999999888   4677888899999999999987777666553

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.53  E-value=0.0045  Score=35.19  Aligned_cols=50  Identities=26%  Similarity=0.361  Sum_probs=39.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAK   56 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~   56 (85)
                      ++.++|.|+ ||+|..++..|+..|. ++.++|.+                   ..+.+.+.+.+...++.
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~   99 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH   99 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcc
Confidence            578999985 8999999999999997 68888753                   24677777778777665

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.45  E-value=0.0047  Score=33.20  Aligned_cols=43  Identities=26%  Similarity=0.262  Sum_probs=32.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHH
Q 034737            4 KPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVA   47 (85)
Q Consensus         4 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~   47 (85)
                      .++.+++|.|+ +++|...+..+...|+ .|+++++++++.+.+.
T Consensus        31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~   74 (172)
T d1h2ba2          31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE   74 (172)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH
T ss_pred             CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh
Confidence            35788999875 9999998888877775 6677788876554443

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.43  E-value=0.006  Score=32.57  Aligned_cols=40  Identities=15%  Similarity=0.233  Sum_probs=32.0

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~   48 (85)
                      .+.|.|+ |-+|.++++.|.+.|+  +|++.|++++..+.+.+
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~   44 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD   44 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH
Confidence            4677775 8999999999999986  68888998876665544

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.42  E-value=0.0066  Score=32.17  Aligned_cols=45  Identities=20%  Similarity=0.347  Sum_probs=35.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      .+.+.|.|+ +.+|..++..|+.+|  .+++++|++++..+....++.
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~   51 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLE   51 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHh
Confidence            456777785 889999999999987  479999999877666555554

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.41  E-value=0.01  Score=31.75  Aligned_cols=44  Identities=25%  Similarity=0.372  Sum_probs=32.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVA   47 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~   47 (85)
                      ++++.+++|.|+ +++|...+..+...+. +|+++++++++++.+.
T Consensus        26 ~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~   70 (175)
T d1cdoa2          26 VEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK   70 (175)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH
Confidence            445789999986 7778887877777766 6888888887765544

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.39  E-value=0.014  Score=31.91  Aligned_cols=46  Identities=20%  Similarity=0.146  Sum_probs=35.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKEN   54 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~   54 (85)
                      +..+|=.||+.|.   ++..|++.|++|+++|.++...+.+.+.....+
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~   83 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE   83 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccc
Confidence            4568889988874   567788889999999999877777766555443

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.39  E-value=0.008  Score=34.64  Aligned_cols=48  Identities=23%  Similarity=0.252  Sum_probs=37.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhh
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENA   55 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~   55 (85)
                      +++.++=.||+.|+   ++..+++.|++|+.+|.++...+.+.+.....+.
T Consensus       120 ~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~  167 (254)
T d2nxca1         120 PGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGV  167 (254)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTC
T ss_pred             ccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCC
Confidence            48899999998885   3345667899999999999988888776654443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.39  E-value=0.0097  Score=31.49  Aligned_cols=46  Identities=24%  Similarity=0.348  Sum_probs=36.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      ++.+.|.|+ +.+|..++..++.++.  +++++|++++.++....++..
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~   53 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH   53 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhh
Confidence            556777786 9999999999998774  799999998877666666643

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.32  E-value=0.0033  Score=33.62  Aligned_cols=34  Identities=21%  Similarity=0.387  Sum_probs=28.6

Q ss_pred             CCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737           14 GASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus        14 ~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      |.+-+|.+++++|.+.|+.|.+.+|+.++.+.+.
T Consensus         8 GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           8 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            4488999999999999999999999977655543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.31  E-value=0.0094  Score=30.25  Aligned_cols=34  Identities=12%  Similarity=0.045  Sum_probs=29.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .+.++|.|+ +.+|..++..|...|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            467788866 8899999999999999999998854

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.29  E-value=0.0039  Score=33.09  Aligned_cols=37  Identities=19%  Similarity=0.212  Sum_probs=31.0

Q ss_pred             CCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737           14 GASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus        14 ~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      |.|-+|.++++.|.+.|+++++.+|+.++.+.+.+++
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            4589999999999999999999999987776665544

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=96.25  E-value=0.02  Score=32.87  Aligned_cols=51  Identities=27%  Similarity=0.388  Sum_probs=37.7

Q ss_pred             CCCCCcEEEEecCCCh-HHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH
Q 034737            2 ELKPGLSAFVTGGASG-IGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         2 ~l~~~~~~litG~~~g-ig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      ++.||..++=.|+++| +...+++.+... .+|+.++++++.++.+.+.+...
T Consensus        82 ~i~pG~rVLEiG~GsG~lt~~la~~v~~~-g~V~~vD~~e~~~~~A~~n~~~~  133 (250)
T d1yb2a1          82 GLRPGMDILEVGVGSGNMSSYILYALNGK-GTLTVVERDEDNLKKAMDNLSEF  133 (250)
T ss_dssp             CCCTTCEEEEECCTTSHHHHHHHHHHTTS-SEEEEECSCHHHHHHHHHHHHTT
T ss_pred             CCCCcCEEEEeeeeCcHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHh
Confidence            4557889999997765 555666665444 49999999998888888777653

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.24  E-value=0.0069  Score=33.05  Aligned_cols=37  Identities=32%  Similarity=0.433  Sum_probs=33.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++. ||.++|.|-+.=+|+.++..|+.+|+.|..++.+
T Consensus        26 ~l~-GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          26 RLY-GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTT-TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCC-CCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            467 9999999999999999999999999999877543

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.19  E-value=0.0092  Score=33.30  Aligned_cols=50  Identities=20%  Similarity=0.280  Sum_probs=34.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      .+.||.+++=.||+.|.-......+...| .|+.+|.++...+.+.+....
T Consensus        53 ~lkpg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~  102 (209)
T d1nt2a_          53 KLRGDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRE  102 (209)
T ss_dssp             CCCSSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhc
Confidence            35568899999988874433333334444 899999999877776665543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.19  E-value=0.01  Score=30.31  Aligned_cols=34  Identities=26%  Similarity=0.409  Sum_probs=30.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .+.++|.|+ +.+|..++..|.++|.+|.++.+.+
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            577888866 8999999999999999999998765

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.18  E-value=0.027  Score=31.31  Aligned_cols=52  Identities=23%  Similarity=0.319  Sum_probs=38.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      .+.++..++-.|+..|.-....-++......|+.++.+++..+.+.+.+...
T Consensus        72 ~l~~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~  123 (213)
T d1dl5a1          72 GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL  123 (213)
T ss_dssp             TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             hccccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhh
Confidence            3456789999998887666555555555669999999998888877776543

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.15  E-value=0.0077  Score=32.44  Aligned_cols=44  Identities=23%  Similarity=0.250  Sum_probs=32.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCccchHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEEKGNEVA   47 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~~~   47 (85)
                      ++++.+++|.|+ +++|...+..+...|++ |+++++++.+.+.+.
T Consensus        26 ~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~   70 (174)
T d1f8fa2          26 VTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK   70 (174)
T ss_dssp             CCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred             CCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH
Confidence            335788999987 89999999888888875 456677776555443

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.14  E-value=0.011  Score=30.14  Aligned_cols=34  Identities=32%  Similarity=0.332  Sum_probs=29.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .+.++|.|+ +.+|..++..|.+.|.+|.++.+.+
T Consensus        30 ~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          30 VNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            567778765 8999999999999999999997754

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.09  E-value=0.025  Score=31.21  Aligned_cols=62  Identities=19%  Similarity=0.187  Sum_probs=42.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      +.++..++=.||+.|.   ++..|+++|++|+.+|.+++..+.+.+.+...+.        +++.++.+|..+
T Consensus        13 l~~~~rVLDiGcG~G~---~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~--------~~i~~~~~d~~~   74 (231)
T d1vl5a_          13 LKGNEEVLDVATGGGH---VANAFAPFVKKVVAFDLTEDILKVARAFIEGNGH--------QQVEYVQGDAEQ   74 (231)
T ss_dssp             CCSCCEEEEETCTTCH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTC--------CSEEEEECCC-C
T ss_pred             CCCcCEEEEecccCcH---HHHHHHHhCCEEEEEECCHHHHhhhhhccccccc--------cccccccccccc
Confidence            3446788889988774   3566788899999999998777666555543322        126777777665

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.09  E-value=0.02  Score=30.40  Aligned_cols=46  Identities=15%  Similarity=0.083  Sum_probs=35.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      .+.+.|.|+ |.+|..++..+...+ .+++++|.+++.++.....+..
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~   53 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSH   53 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhh
Confidence            456777786 999999998888777 4799999998877776666654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.05  E-value=0.011  Score=31.95  Aligned_cols=38  Identities=16%  Similarity=0.335  Sum_probs=33.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      .|. ||+++|.|- +-+|+.+|+++...|++|+++..+|-
T Consensus        20 ~la-Gk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          20 LIS-GKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCT-TSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             eec-CCEEEEecc-cccchhHHHHHHhCCCEEEEEecCch
Confidence            356 999999977 77999999999999999999999983

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.04  E-value=0.012  Score=32.23  Aligned_cols=36  Identities=25%  Similarity=0.254  Sum_probs=32.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +. |+++.|.|. |.||+.+++.+...|++|+..++.+
T Consensus        40 l~-gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          40 IQ-GEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CT-TCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cc-CceEEEecc-ccccccceeeeeccccccccccccc
Confidence            55 889999987 6699999999999999999998865

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.01  E-value=0.013  Score=29.42  Aligned_cols=34  Identities=38%  Similarity=0.402  Sum_probs=29.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      +.++|.|+ +-+|..+|..|.+.|.+|.++.+.+.
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            67788866 88999999999999999999987653

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.00  E-value=0.02  Score=30.17  Aligned_cols=45  Identities=20%  Similarity=0.373  Sum_probs=34.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      .|..+| |+ +.+|.+++..++.++.  +++++|.+++.++....++..
T Consensus         2 ~Ki~II-Ga-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~   48 (143)
T d1llda1           2 TKLAVI-GA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQH   48 (143)
T ss_dssp             CEEEEE-CC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             CEEEEE-CC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHh
Confidence            455555 75 9999999999998875  799999998776665555543

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.99  E-value=0.041  Score=29.83  Aligned_cols=45  Identities=24%  Similarity=0.172  Sum_probs=33.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      +..+|=.||+.|   ..+..|+++|++|+.+|.++..++.+.......
T Consensus        31 ~grvLDiGcG~G---~~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~   75 (198)
T d2i6ga1          31 PGRTLDLGCGNG---RNSLYLAANGYDVTAWDKNPASMANLERIKAAE   75 (198)
T ss_dssp             SCEEEEETCTTS---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCcEEEECCCCC---HHHHHHHHHhhhhccccCcHHHHHHHHHHhhhc
Confidence            346888888666   356788889999999999998777776655443

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.99  E-value=0.016  Score=30.47  Aligned_cols=35  Identities=23%  Similarity=0.200  Sum_probs=28.3

Q ss_pred             CcEEEE-ecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFV-TGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~li-tG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++.++| -.+++.||..++..|..+|++|.++.+.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            445454 44668899999999999999999998764

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.98  E-value=0.012  Score=32.52  Aligned_cols=36  Identities=22%  Similarity=0.246  Sum_probs=31.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +. |+++.|.|. |.||+.+++.+...|++|+..++..
T Consensus        47 L~-gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          47 IR-GETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             CT-TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             ee-CceEEEecc-ccccccceeeeeccccceeeccCcc
Confidence            56 889999976 8999999999999999999998754

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.96  E-value=0.009  Score=33.14  Aligned_cols=36  Identities=25%  Similarity=0.187  Sum_probs=31.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +. ++++.|.|. |.||+.+++.+...|++|+..++..
T Consensus        43 l~-~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          43 LG-QQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             GG-GSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cc-ceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            45 788999876 8899999999999999999998753

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.93  E-value=0.027  Score=28.28  Aligned_cols=33  Identities=21%  Similarity=0.282  Sum_probs=28.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +.++|.|+ +.+|..++..|.+.|.+|.++.+.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            56777765 8899999999999999999998864

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=95.91  E-value=0.036  Score=31.05  Aligned_cols=64  Identities=23%  Similarity=0.301  Sum_probs=43.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHh-CCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAG-KGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~-~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      .+.+++.++=.||+.|   .++..+++ .|+.|+.++.++...+.+.+.....+..       .++.++..|+.+
T Consensus        30 ~l~pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~-------~~v~~~~~d~~~   94 (245)
T d1nkva_          30 RMKPGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVS-------ERVHFIHNDAAG   94 (245)
T ss_dssp             CCCTTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCT-------TTEEEEESCCTT
T ss_pred             CCCCCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhcc-------ccchhhhhHHhh
Confidence            3556888999998776   23445554 4789999999987777666555444322       237788777765

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.86  E-value=0.013  Score=32.48  Aligned_cols=36  Identities=22%  Similarity=0.293  Sum_probs=31.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +. |+++.|.|. |.||+.+++.+...|++|+..++..
T Consensus        41 l~-gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~   76 (197)
T d1j4aa1          41 VR-DQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFR   76 (197)
T ss_dssp             GG-GSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cc-CCeEEEecc-cccchhHHHhHhhhcccccccCccc
Confidence            55 889999976 8999999999999999999988654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.014  Score=29.85  Aligned_cols=33  Identities=12%  Similarity=0.119  Sum_probs=29.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      |.++|.|+ +.||..++..|...|.+|.++.+++
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            57888876 6799999999999999999998864

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=95.82  E-value=0.006  Score=34.88  Aligned_cols=36  Identities=19%  Similarity=0.294  Sum_probs=29.7

Q ss_pred             CcEEEEecCCChHHHHH-----HHHHHhCCCEEEEEecCcc
Q 034737            6 GLSAFVTGGASGIGRAL-----SLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         6 ~~~~litG~~~gig~~~-----~~~l~~~g~~v~~~~~~~~   41 (85)
                      ++.++++.|-||.|+.+     +..|+++|.+|.++|.+++
T Consensus        19 ~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          19 EHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             SCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            55667776799988865     6889999999999999874

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.81  E-value=0.017  Score=30.34  Aligned_cols=31  Identities=19%  Similarity=0.233  Sum_probs=25.9

Q ss_pred             CCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737           14 GASGIGRALSLALAGKGVFVTVVDLSEEKGN   44 (85)
Q Consensus        14 ~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~   44 (85)
                      |.+.+|..+++.|.++|+.|+..+++.....
T Consensus         7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~   37 (152)
T d1i36a2           7 GFGEVAQTLASRLRSRGVEVVTSLEGRSPST   37 (152)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEECCTTCCHHH
T ss_pred             cHHHHHHHHHHHHHHCCCeEEEEcCchhHHH
Confidence            4489999999999999999998887765443

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.01  Score=33.21  Aligned_cols=43  Identities=23%  Similarity=0.132  Sum_probs=35.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      ++..+|..||+.|   ..+..|+++|++|+.+|.++...+.+.+..
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            3678999999888   568888999999999999997766655543

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.78  E-value=0.037  Score=29.92  Aligned_cols=61  Identities=18%  Similarity=0.216  Sum_probs=42.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      ++.+++=.||+.|   .++..++..+.+|+.++.++..++.+.+.+...+..       +++.++.+|..+
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~-------~~v~~~~gda~~   93 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLG-------DNVTLMEGDAPE   93 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCC-------TTEEEEESCHHH
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCC-------cceEEEECchhh
Confidence            4677888887766   334556777889999999998888888777655432       127777776543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.78  E-value=0.019  Score=28.88  Aligned_cols=35  Identities=23%  Similarity=0.317  Sum_probs=30.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +++.++|.|+ +-+|..++..|...|.+|.++.+.+
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            3678888876 8899999999999999999998764

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.73  E-value=0.013  Score=32.80  Aligned_cols=34  Identities=26%  Similarity=0.225  Sum_probs=27.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +|.++|.|+ +--|...|.+|.+.|++|.++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            467788876 4458899999999999999998653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.73  E-value=0.015  Score=29.59  Aligned_cols=34  Identities=29%  Similarity=0.340  Sum_probs=29.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      +.++|.|+ +.+|..+|..|...|.+|.++.+.+.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            56777766 88999999999999999999988653

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.71  E-value=0.012  Score=34.07  Aligned_cols=51  Identities=18%  Similarity=0.232  Sum_probs=38.5

Q ss_pred             CCCCCcEEEEecCCC-hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH
Q 034737            2 ELKPGLSAFVTGGAS-GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         2 ~l~~~~~~litG~~~-gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      ++.||.+++=.|+.+ .+...+++.+...| +|+.++.+++.++.+.+.+...
T Consensus        93 ~i~PG~~VLE~G~GsG~lt~~La~~vgp~G-~V~~~d~~~~~~~~Ar~n~~~~  144 (264)
T d1i9ga_          93 DIFPGARVLEAGAGSGALTLSLLRAVGPAG-QVISYEQRADHAEHARRNVSGC  144 (264)
T ss_dssp             TCCTTCEEEEECCTTSHHHHHHHHHHCTTS-EEEEECSCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEecCcCCcHHHHHHHHhhCCCc-EEEEecCCHHHHHHHHHhhhhh
Confidence            455788999999665 56667777776665 8999999998888877776653

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.71  E-value=0.059  Score=29.33  Aligned_cols=37  Identities=24%  Similarity=0.293  Sum_probs=31.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      +. ++++.+.|. +.||+.+++.+...|++|+..++...
T Consensus        42 l~-~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~   78 (184)
T d1ygya1          42 IF-GKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVS   78 (184)
T ss_dssp             CT-TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             cc-ceeeeeccc-cchhHHHHHHhhhccceEEeecCCCC
Confidence            45 788888875 89999999999999999999987653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.58  E-value=0.02  Score=29.08  Aligned_cols=34  Identities=26%  Similarity=0.308  Sum_probs=29.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .+.++|.|+ +-||..++..|...|.+|.++.+.+
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            357788866 8899999999999999999998754

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=95.57  E-value=0.069  Score=30.50  Aligned_cols=63  Identities=11%  Similarity=0.084  Sum_probs=41.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      +.++..+|=.||+.|.   ++..|+++ |++|+.++.++...+.+.+.....+...       ++.++.+|..+
T Consensus        65 l~~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~-------~v~~~~~d~~~  128 (282)
T d2o57a1          65 LQRQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLAD-------NITVKYGSFLE  128 (282)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTT-------TEEEEECCTTS
T ss_pred             CCCCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccc-------ccccccccccc
Confidence            3457788989987662   34444443 7899999999887777666665543221       26677777655

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.55  E-value=0.075  Score=30.92  Aligned_cols=60  Identities=22%  Similarity=0.253  Sum_probs=38.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      +++++-.||+.|+   ++..+++.|+ +|+.++.++.. ..+.+.....+..       .++.++..|+.+.
T Consensus        36 ~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~-------~~i~~~~~~~~~l   96 (311)
T d2fyta1          36 DKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLE-------DTITLIKGKIEEV   96 (311)
T ss_dssp             TCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCT-------TTEEEEESCTTTS
T ss_pred             cCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCC-------ccceEEEeeHHHh
Confidence            8899999998875   4556777786 68899887643 3333333322221       2366777766653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.53  E-value=0.02  Score=28.92  Aligned_cols=34  Identities=29%  Similarity=0.206  Sum_probs=29.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .+.++|.|+ +-||..+|..|...|.+|.++.+.+
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            356788866 8999999999999999999998754

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.50  E-value=0.051  Score=27.29  Aligned_cols=34  Identities=21%  Similarity=0.361  Sum_probs=28.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      .++.|.| +|-+|+-++..-.+.|+++++.+.+++
T Consensus        12 ~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2          12 TRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            4577776 489999999999999999999987653

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=95.47  E-value=0.016  Score=31.96  Aligned_cols=57  Identities=16%  Similarity=0.202  Sum_probs=41.1

Q ss_pred             EecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737           11 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus        11 itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      .|-|+||...++.+.+ . +.+|+++|++++.++.+.+.+.....+         +.++..++.+...
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r---------~~~~~~~f~~~~~   86 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDR---------VSLFKVSYREADF   86 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTT---------EEEEECCGGGHHH
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcccccc---------ccchhHHHhhHHH
Confidence            4556677877888776 3 468999999998888877766544434         7788887776543

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=95.46  E-value=0.022  Score=32.58  Aligned_cols=34  Identities=24%  Similarity=0.349  Sum_probs=29.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEe
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVD   37 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~   37 (85)
                      ++. +++++|-| .+..|..+++.|.+.|++|+.++
T Consensus        28 ~l~-g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIE-GKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCT-TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCC-CCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            466 88999986 58899999999999999988664

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.44  E-value=0.019  Score=31.62  Aligned_cols=36  Identities=25%  Similarity=0.213  Sum_probs=29.2

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE   45 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~   45 (85)
                      +.|. |.|-+|..++..|+..|++|+++|.+++..+.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~   38 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDL   38 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            4444 55889999999999999999999998765444

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=95.44  E-value=0.036  Score=31.07  Aligned_cols=63  Identities=24%  Similarity=0.246  Sum_probs=46.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      +.++..++-.|+.+|.-.++.-+|+  |..|+.++++++-.+...+.+...+..        ++.++.+|..+
T Consensus        76 l~~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~--------nv~~~~gd~~~  138 (215)
T d1jg1a_          76 LKPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVK--------NVHVILGDGSK  138 (215)
T ss_dssp             CCTTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCC--------SEEEEESCGGG
T ss_pred             cCccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCc--------eeEEEECcccc
Confidence            4457789999999998888877777  357889999987777777766654322        27788877764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.42  E-value=0.013  Score=33.15  Aligned_cols=31  Identities=29%  Similarity=0.371  Sum_probs=26.8

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|+ +-.|.++|.+|+++|.+|++++++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            777765 7789999999999999999998753

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.40  E-value=0.016  Score=35.74  Aligned_cols=61  Identities=20%  Similarity=0.280  Sum_probs=43.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPS   65 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~   65 (85)
                      +..++|.|+ ||+|-.+++.|+..|. ++.++|.+                   ..+.+.+.+.+...++..+       
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~-------  108 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCN-------  108 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCC-------
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCc-------
Confidence            346888887 8899999999999997 68888764                   2356677777777666533       


Q ss_pred             eEEEEecCC
Q 034737           66 AMFIRCDVT   74 (85)
Q Consensus        66 ~~~~~~Dv~   74 (85)
                      +..+..++.
T Consensus       109 i~~~~~~i~  117 (426)
T d1yovb1         109 VVPHFNKIQ  117 (426)
T ss_dssp             CEEECSCGG
T ss_pred             eEeeecccc
Confidence            555555554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.39  E-value=0.055  Score=28.43  Aligned_cols=44  Identities=16%  Similarity=0.191  Sum_probs=34.0

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCC--EEEEEecCcc--chHHHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEE--KGNEVAALVE   51 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~--~~~~~~~~l~   51 (85)
                      .+.|.|+++.+|..++..++.++.  +++++|+++.  +++....++.
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~   49 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIY   49 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccch
Confidence            378999999999999999999883  7999998763  3444444554

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.35  E-value=0.029  Score=30.59  Aligned_cols=34  Identities=26%  Similarity=0.323  Sum_probs=29.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .|.++|.|+ +--|...+..|.++|++|.++.+++
T Consensus        43 ~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          43 KKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            678888876 5668899999999999999998864

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.34  E-value=0.06  Score=29.52  Aligned_cols=37  Identities=22%  Similarity=0.209  Sum_probs=31.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      +. ++++-|.|. +.||+.+++.+...|++|+..++...
T Consensus        45 l~-g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          45 LD-NKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CT-TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ec-ccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            45 789888876 89999999999999999999887543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.33  E-value=0.084  Score=28.70  Aligned_cols=36  Identities=22%  Similarity=0.181  Sum_probs=31.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +. ++++.|.|. +.||+.+++++...|++|+..++..
T Consensus        42 l~-~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          42 LE-AMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CT-TCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             cc-ccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence            55 788888875 8899999999999999999998764

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=95.32  E-value=0.058  Score=28.04  Aligned_cols=41  Identities=22%  Similarity=0.225  Sum_probs=32.4

Q ss_pred             EEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHH
Q 034737            9 AFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l   50 (85)
                      +.|.|+ |.+|.+++..++..+  .+++++|.+++..+.....+
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~   45 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDM   45 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhh
Confidence            556685 899999999999987  47999999987766554444

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.31  E-value=0.012  Score=33.13  Aligned_cols=51  Identities=27%  Similarity=0.234  Sum_probs=41.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      +.+|..+|-.|+++|.-.++.-+++.....|+.++++++-.+.+.+.+...
T Consensus        74 l~~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~  124 (224)
T d1i1na_          74 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKD  124 (224)
T ss_dssp             SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhcccc
Confidence            445789999999999888888888887789999999998887777766543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.28  E-value=0.027  Score=33.13  Aligned_cols=34  Identities=18%  Similarity=0.054  Sum_probs=29.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEe
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVD   37 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~   37 (85)
                      +|. +++++|-|. +.+|..+++.|.+.|++|+.++
T Consensus        33 ~L~-gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          33 GFG-DKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SST-TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCC-CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            356 889999876 7999999999999999988764

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=95.28  E-value=0.014  Score=32.32  Aligned_cols=35  Identities=34%  Similarity=0.446  Sum_probs=29.1

Q ss_pred             CcEEEEecCCChHHH-----HHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGR-----ALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~-----~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +|++.|+++.+|.|+     .++..|+.+|.+|.++|.+.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            788999999888777     45677889999999998764

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.26  E-value=0.013  Score=29.48  Aligned_cols=33  Identities=36%  Similarity=0.456  Sum_probs=28.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +.++|.|+ +.+|..+|..|.+.|.+|.++.+.+
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            56777765 8899999999999999999998754

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.19  E-value=0.012  Score=30.04  Aligned_cols=34  Identities=26%  Similarity=0.279  Sum_probs=29.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .+.++|.|+ +-||..+|..|.+.|.+|.++.|++
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            357777766 8999999999999999999998865

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=95.19  E-value=0.041  Score=28.96  Aligned_cols=45  Identities=20%  Similarity=0.197  Sum_probs=34.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      |.+.|.|+ |.+|..++..++.+|.  +++++|.++++++....++..
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~   48 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQD   48 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhc
Confidence            34556684 8999999999998774  799999998877766656654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.19  E-value=0.076  Score=28.35  Aligned_cols=44  Identities=23%  Similarity=0.267  Sum_probs=35.1

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      .+.|.|+ |.+|..++..|+.++.  +++++|.+++.++....++..
T Consensus        21 KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~   66 (159)
T d2ldxa1          21 KITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQH   66 (159)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhC
Confidence            4666685 9999999999999875  799999998877766666653

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.15  E-value=0.018  Score=30.85  Aligned_cols=34  Identities=18%  Similarity=0.152  Sum_probs=27.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~   40 (85)
                      +|.++|.|+ +-.|...|..|.++|++ |.++.+++
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            456777766 67788999999999984 88998764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.08  E-value=0.041  Score=28.32  Aligned_cols=34  Identities=24%  Similarity=0.308  Sum_probs=29.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++.++|.|+ +-+|..++..|...|.+|.++.+.+
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            577888866 8899999999999999999998754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=95.08  E-value=0.024  Score=32.68  Aligned_cols=33  Identities=18%  Similarity=0.226  Sum_probs=28.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEE
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVV   36 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~   36 (85)
                      +++ +++++|.| .+..|..+++.|.+.|++|+.+
T Consensus        33 ~l~-g~~v~IQG-fGnVG~~~a~~L~e~Gakvvav   65 (255)
T d1bgva1          33 TLV-GKTVALAG-FGNVAWGAAKKLAELGAKAVTL   65 (255)
T ss_dssp             CST-TCEEEECC-SSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCC-CCEEEEEC-CCHHHHHHHHHHHHcCCeEEEE
Confidence            466 89999997 4889999999999999998766

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.05  E-value=0.067  Score=29.43  Aligned_cols=59  Identities=20%  Similarity=0.208  Sum_probs=38.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVT   74 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~   74 (85)
                      +. |++++=.||+.|.   ++..++.+|+ +|+.++.++...+.+.+.+...+..         ..++..|+.
T Consensus        45 l~-g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~---------~~~~~~d~~  104 (201)
T d1wy7a1          45 IE-GKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGK---------FKVFIGDVS  104 (201)
T ss_dssp             ST-TCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTS---------EEEEESCGG
T ss_pred             CC-CCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCC---------ceEEECchh
Confidence            45 8888888877662   2333455665 8999999998777776655433322         556666654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.92  E-value=0.045  Score=28.74  Aligned_cols=35  Identities=31%  Similarity=0.487  Sum_probs=29.4

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccc
Q 034737            8 SAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEK   42 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~   42 (85)
                      .+.|.|+++.+|.+++..|..++.  +++++|.++.+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~   38 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP   38 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccc
Confidence            378899999999999999998875  58889987643

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.91  E-value=0.04  Score=30.64  Aligned_cols=34  Identities=35%  Similarity=0.284  Sum_probs=27.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .+.++|.|+ +--|..++..|.++|.+|+++.+++
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            356777776 4557788889999999999999864

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.90  E-value=0.1  Score=27.46  Aligned_cols=46  Identities=15%  Similarity=0.178  Sum_probs=34.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      ...+.|.|+ +.+|.+++..+..++. +++++|++++..+....++..
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~   49 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSH   49 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhh
Confidence            345667785 8999999987777764 688999988777666666543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.89  E-value=0.028  Score=28.59  Aligned_cols=33  Identities=33%  Similarity=0.218  Sum_probs=28.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +.++|.|+ +-||..+|..|.+.|.+|.++.++.
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEech
Confidence            45777765 8999999999999999999998763

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=94.85  E-value=0.012  Score=32.14  Aligned_cols=32  Identities=28%  Similarity=0.283  Sum_probs=26.4

Q ss_pred             cEEEEecCCChHHH-----HHHHHHHhCCCEEEEEec
Q 034737            7 LSAFVTGGASGIGR-----ALSLALAGKGVFVTVVDL   38 (85)
Q Consensus         7 ~~~litG~~~gig~-----~~~~~l~~~g~~v~~~~~   38 (85)
                      |.+.|||...|.|+     .++..|.++|++|.+++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            67899998878777     456888899999999863

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=94.76  E-value=0.078  Score=28.69  Aligned_cols=23  Identities=30%  Similarity=0.312  Sum_probs=20.7

Q ss_pred             EEEEecCCChHHHHHHHHHHhCC
Q 034737            8 SAFVTGGASGIGRALSLALAGKG   30 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g   30 (85)
                      .+.|+|+++.||.+++..|+...
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~   48 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGE   48 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT
T ss_pred             EEEEECCCcHHHHHHHHHHHcCc
Confidence            58999999999999999999753

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=94.74  E-value=0.11  Score=27.72  Aligned_cols=45  Identities=22%  Similarity=0.279  Sum_probs=36.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~   51 (85)
                      .+.+.|.|+ |.+|..++..++.+|.  +++++|.+++..+....++.
T Consensus        20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~   66 (160)
T d1i0za1          20 NNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQ   66 (160)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHh
Confidence            456667785 8999999999999986  79999999887766666664

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.58  E-value=0.033  Score=31.62  Aligned_cols=34  Identities=32%  Similarity=0.404  Sum_probs=27.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .|.++|.|+ |--|...|.+|.++|++|.++.+++
T Consensus        30 pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          30 PKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            467888877 4558899999999999999998653

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=94.48  E-value=0.05  Score=30.03  Aligned_cols=49  Identities=10%  Similarity=0.057  Sum_probs=36.1

Q ss_pred             CCcEEEEecCCCh-HHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH
Q 034737            5 PGLSAFVTGGASG-IGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         5 ~~~~~litG~~~g-ig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      ++..++=.||+.| +...+++.+...+++|+++|.+++-++.+.+.+...
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~   88 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAY   88 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhh
Confidence            4678888997766 445566655567899999999998777777666543

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.47  E-value=0.059  Score=29.93  Aligned_cols=34  Identities=24%  Similarity=0.291  Sum_probs=28.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .+.++|.|+ +-.|...|..|.++|++|.++.++.
T Consensus        49 ~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          49 KDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            578888877 5558899999999999999998754

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=94.43  E-value=0.034  Score=31.46  Aligned_cols=30  Identities=33%  Similarity=0.438  Sum_probs=25.6

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++|.|+ +-.|..+|.+|+++|.+|+++++.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            667765 777999999999999999999764

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.42  E-value=0.076  Score=28.88  Aligned_cols=36  Identities=22%  Similarity=0.367  Sum_probs=30.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +. ++++.|.|. +.||+.+++.+...|++|+..++..
T Consensus        42 l~-~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          42 AR-GKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             ST-TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cc-ceEEEEeec-ccchhhhhhhcccccceEeeccccc
Confidence            45 788888865 8999999999999999999998753

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.19  E-value=0.043  Score=29.60  Aligned_cols=31  Identities=26%  Similarity=0.146  Sum_probs=26.2

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|+ |--|...|..|+++|.+|.++.+++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            677765 5568899999999999999998865

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=94.09  E-value=0.14  Score=26.64  Aligned_cols=43  Identities=19%  Similarity=0.153  Sum_probs=32.4

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~   51 (85)
                      .+.|.|+ |.+|.+++..|+.++. +++++|.+++..+.....+.
T Consensus         3 KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~   46 (142)
T d1uxja1           3 KISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLY   46 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhh
Confidence            4555585 9999999999888764 89999998877666555553

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.09  E-value=0.078  Score=30.97  Aligned_cols=34  Identities=24%  Similarity=0.352  Sum_probs=28.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .|.++|.|+ |--|..+|.+|.+.|.+|.++..+.
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            577888877 5558899999999999999998765

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=94.09  E-value=0.058  Score=28.09  Aligned_cols=34  Identities=21%  Similarity=0.220  Sum_probs=27.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~   40 (85)
                      ||.++|.|+ +-.|..++..|.+.+.  +|+++++++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            789999987 6678999999998774  688887665

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=94.09  E-value=0.048  Score=31.37  Aligned_cols=33  Identities=24%  Similarity=0.324  Sum_probs=22.3

Q ss_pred             cEEEEecCCChH---HHHHHHHHHhCCCEEEEEecC
Q 034737            7 LSAFVTGGASGI---GRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         7 ~~~litG~~~gi---g~~~~~~l~~~g~~v~~~~~~   39 (85)
                      |.++.|||++|-   +.+++++|.++|++|..++..
T Consensus         2 kili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           2 RLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             EEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            344555544443   457899999999999876543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.04  E-value=0.066  Score=27.28  Aligned_cols=34  Identities=21%  Similarity=0.321  Sum_probs=29.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .+.++|.|+ +-||..++..|...|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            457788866 8999999999999999999997754

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.03  E-value=0.029  Score=30.88  Aligned_cols=35  Identities=37%  Similarity=0.457  Sum_probs=28.1

Q ss_pred             cEEEEecCCChHHH-----HHHHHHHhCCCEEEEEecCcc
Q 034737            7 LSAFVTGGASGIGR-----ALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         7 ~~~litG~~~gig~-----~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      |++.|+++.+|.|+     .++..|+++|.+|.++|.+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            57889988888776     456778889999999987753

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=94.01  E-value=0.024  Score=32.19  Aligned_cols=34  Identities=26%  Similarity=0.419  Sum_probs=26.5

Q ss_pred             cEEEEecCCChHHHH-----HHHHHHhCCCEEEEEecCcc
Q 034737            7 LSAFVTGGASGIGRA-----LSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         7 ~~~litG~~~gig~~-----~~~~l~~~g~~v~~~~~~~~   41 (85)
                      |++.|+| -||.|+.     ++..|++.|.+|.++|.+++
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            4677787 7787774     45688899999999998863

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.00  E-value=0.047  Score=29.43  Aligned_cols=32  Identities=25%  Similarity=0.352  Sum_probs=26.9

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      +.|-|+ |.+|.+++..|+..|.+|.+..|..+
T Consensus         3 I~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           3 VSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            556655 88999999999999999999988543

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.00  E-value=0.18  Score=26.64  Aligned_cols=49  Identities=16%  Similarity=0.182  Sum_probs=34.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHHHHHHHHHHhh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNEVAALVEKENA   55 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~l~~~~~   55 (85)
                      .|.+.|-|++|.||..+..-+.+.  .++|+.+..+. +.+.+.+++.+-.+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~P   52 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNA   52 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhcc
Confidence            478999999999999999888765  46676664432 34555555554444

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=93.97  E-value=0.065  Score=29.65  Aligned_cols=32  Identities=25%  Similarity=0.387  Sum_probs=25.9

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      ++|.|+ +--|...+..|.++|.+|+++.+++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            677766 45577899999999999999988654

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.95  E-value=0.29  Score=28.60  Aligned_cols=60  Identities=25%  Similarity=0.276  Sum_probs=37.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      +++++-.||+.|+   ++..+++.|+ +|++++.++ .+..+.+.....+..       .++.++..|+.+.
T Consensus        39 ~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~-------~~i~~i~~~~~~l   99 (328)
T d1g6q1_          39 DKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFS-------DKITLLRGKLEDV   99 (328)
T ss_dssp             TCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCT-------TTEEEEESCTTTS
T ss_pred             cCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCcc-------ccceEEEeehhhc
Confidence            8899999988774   4556677786 688888775 343443333333222       2366676666543

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=93.92  E-value=0.26  Score=28.27  Aligned_cols=76  Identities=18%  Similarity=0.064  Sum_probs=48.1

Q ss_pred             CCCCCcEEEEecCCCh-HHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhc---------cCCCCCCceEEEEe
Q 034737            2 ELKPGLSAFVTGGASG-IGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKF---------HSNLGFPSAMFIRC   71 (85)
Q Consensus         2 ~l~~~~~~litG~~~g-ig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~   71 (85)
                      ++.+|..++=.|+++| +...+++.+.. +.+|+.++.+++.++.+.+.+...+...         ....+...+..+-.
T Consensus       100 ~i~pG~~VLDiG~GsG~lt~~lA~~~~~-~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~~~~~~~~~~D~V~~  178 (266)
T d1o54a_         100 DVKEGDRIIDTGVGSGAMCAVLARAVGS-SGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFL  178 (266)
T ss_dssp             TCCTTCEEEEECCTTSHHHHHHHHHTTT-TCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEE
T ss_pred             CCCCCCEEEECCCCCCHHHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEeccccccccccceeeeEe
Confidence            4556889999997665 55555554433 4599999999988888887776543211         01122234556666


Q ss_pred             cCCCHHH
Q 034737           72 DVTNTKF   78 (85)
Q Consensus        72 Dv~~~~~   78 (85)
                      |+.++..
T Consensus       179 d~p~p~~  185 (266)
T d1o54a_         179 DVPDPWN  185 (266)
T ss_dssp             CCSCGGG
T ss_pred             cCCCHHH
Confidence            7777654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=93.82  E-value=0.095  Score=27.32  Aligned_cols=42  Identities=17%  Similarity=0.232  Sum_probs=30.1

Q ss_pred             EEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHH
Q 034737            9 AFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~   51 (85)
                      +.|.|+ +.+|..++..++.++.  +++++|++++.++....++.
T Consensus         4 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~   47 (142)
T d1y6ja1           4 VAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDIN   47 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHT
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeec
Confidence            444476 9999999999998875  79999999877665555554

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.81  E-value=0.15  Score=29.42  Aligned_cols=50  Identities=20%  Similarity=0.290  Sum_probs=36.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHh
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKEN   54 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~   54 (85)
                      .+.+|..+|=.||+-|   .++.+++++ |++|+.++.+++..+.+.+.+.+.+
T Consensus        49 ~l~~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~   99 (280)
T d2fk8a1          49 DLKPGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASID   99 (280)
T ss_dssp             CCCTTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSC
T ss_pred             CCCCCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhc
Confidence            3456889999998755   245555543 8899999999988887777665543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=93.74  E-value=0.055  Score=30.91  Aligned_cols=30  Identities=27%  Similarity=0.401  Sum_probs=25.2

Q ss_pred             EEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~   39 (85)
                      ++|.|+ +-+|.++|.+|+++|. +|.+++++
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            667765 7889999999999996 69999875

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.69  E-value=0.093  Score=27.60  Aligned_cols=24  Identities=33%  Similarity=0.434  Sum_probs=21.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCC
Q 034737            7 LSAFVTGGASGIGRALSLALAGKG   30 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g   30 (85)
                      ..+.|+|+++.+|..++..|+...
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcc
Confidence            369999999999999999999865

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=93.66  E-value=0.097  Score=29.39  Aligned_cols=44  Identities=23%  Similarity=0.142  Sum_probs=31.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~   51 (85)
                      +++++|=.||+.|-   .+..|++.|. .|+++|.++..++.+.+...
T Consensus        24 ~~~~VLDlGCG~G~---~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~   68 (252)
T d1ri5a_          24 RGDSVLDLGCGKGG---DLLKYERAGIGEYYGVDIAEVSINDARVRAR   68 (252)
T ss_dssp             TTCEEEEETCTTTT---THHHHHHHTCSEEEEEESCHHHHHHHHHHHH
T ss_pred             CcCEEEEecccCcH---HHHHHHHcCCCeEEEecCCHHHHHHHHHHHH
Confidence            36788889987762   3455666664 79999999987777765554

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.63  E-value=0.33  Score=28.21  Aligned_cols=60  Identities=18%  Similarity=0.238  Sum_probs=37.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      +++++-.|++.|+   ++..+++.|+ +|+.++.++. ...+.+.....+..       .++.++..|+.+.
T Consensus        34 ~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~-------~~v~~~~~~~~~~   94 (316)
T d1oria_          34 DKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLD-------HVVTIIKGKVEEV   94 (316)
T ss_dssp             TCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCT-------TTEEEEESCTTTC
T ss_pred             cCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCc-------cccceEeccHHHc
Confidence            8899999988875   4556677775 6888987753 44443333322211       2266777666553

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.61  E-value=0.15  Score=26.51  Aligned_cols=42  Identities=14%  Similarity=0.091  Sum_probs=32.8

Q ss_pred             EEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHH
Q 034737            9 AFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~   51 (85)
                      +.|.|+ |.+|.+++..++.++.  +++++|.+++..+....++.
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~   46 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLA   46 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHh
Confidence            456685 9999999999998774  69999999877766555554

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.49  E-value=0.34  Score=28.61  Aligned_cols=51  Identities=20%  Similarity=0.322  Sum_probs=37.5

Q ss_pred             CCCCCcEEEEecCCCh-HHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH
Q 034737            2 ELKPGLSAFVTGGASG-IGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         2 ~l~~~~~~litG~~~g-ig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      ++.||..++=.|+++| +...+++.+...| +|+.++.+++.++.+.+.+...
T Consensus        95 ~i~pG~rVLE~GtGsG~lt~~LAr~vg~~G-~V~t~E~~~~~~~~A~~n~~~~  146 (324)
T d2b25a1          95 DINPGDTVLEAGSGSGGMSLFLSKAVGSQG-RVISFEVRKDHHDLAKKNYKHW  146 (324)
T ss_dssp             TCCTTCEEEEECCTTSHHHHHHHHHHCTTC-EEEEEESSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecccccHHHHHHHHHhCCCc-EEEEecCCHHHHHHHHHHHHHh
Confidence            3556888888886655 5556666665555 8999999998888877777654

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.48  E-value=0.17  Score=26.21  Aligned_cols=43  Identities=19%  Similarity=0.234  Sum_probs=32.7

Q ss_pred             EEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHH
Q 034737            9 AFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEK   52 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~   52 (85)
                      +.|.|+ |.+|..++..++.++  .+++++|.+++.++....++..
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~   47 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH   47 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccc
Confidence            455685 889999999888776  4799999998777665555543

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.43  E-value=0.31  Score=27.27  Aligned_cols=81  Identities=21%  Similarity=0.185  Sum_probs=48.2

Q ss_pred             CCCCCcEEEEecCCCh-HHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhc-------cC---CCCCCceEEEE
Q 034737            2 ELKPGLSAFVTGGASG-IGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKF-------HS---NLGFPSAMFIR   70 (85)
Q Consensus         2 ~l~~~~~~litG~~~g-ig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~-------~~---~~~~~~~~~~~   70 (85)
                      .+.||.+++=.|++.| .-.++++..... -.|+.++.++..++.+.+.........       .+   ......+.++-
T Consensus        70 ~i~pG~~VLDlGaGsG~~t~~la~~VG~~-G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~  148 (227)
T d1g8aa_          70 PIKPGKSVLYLGIASGTTASHVSDIVGWE-GKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIF  148 (227)
T ss_dssp             CCCTTCEEEEETTTSTTHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred             ccCCCCEEEEeccCCCHHHHHHHHHhCCC-CEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEEE
Confidence            3556889999997766 444555544444 499999999987777665543222100       00   01223455666


Q ss_pred             ecCCCHHH-HHHhh
Q 034737           71 CDVTNTKF-ALAFL   83 (85)
Q Consensus        71 ~Dv~~~~~-~~~~~   83 (85)
                      .|+..++. ..++.
T Consensus       149 ~d~~~~~~~~~~l~  162 (227)
T d1g8aa_         149 EDVAQPTQAKILID  162 (227)
T ss_dssp             ECCCSTTHHHHHHH
T ss_pred             EEccccchHHHHHH
Confidence            77776666 55543

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.32  E-value=0.27  Score=27.48  Aligned_cols=46  Identities=15%  Similarity=0.161  Sum_probs=31.3

Q ss_pred             CCCCCcEEEEecCCChHH-HHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737            2 ELKPGLSAFVTGGASGIG-RALSLALAGKGVFVTVVDLSEEKGNEVAAL   49 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig-~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~   49 (85)
                      .+.+|.+++=.||+.|.- .++++. ... ..|+.++.++...+.+.+.
T Consensus        71 ~ikpG~~VLDlGcGsG~~~~~la~~-~~~-g~V~aVDiS~~~i~~a~~~  117 (230)
T d1g8sa_          71 PIKRDSKILYLGASAGTTPSHVADI-ADK-GIVYAIEYAPRIMRELLDA  117 (230)
T ss_dssp             CCCTTCEEEEESCCSSHHHHHHHHH-TTT-SEEEEEESCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCEEcCHHHHHHHHh-CCC-CEEEEEeCcHHHHHHHHHH
Confidence            355688999999888743 344442 333 4899999998766665543

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.19  E-value=0.33  Score=28.05  Aligned_cols=63  Identities=22%  Similarity=0.222  Sum_probs=42.4

Q ss_pred             CCCCcEEEEecCCCh-HHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            3 LKPGLSAFVTGGASG-IGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         3 l~~~~~~litG~~~g-ig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      +.+|..+|=.||+-| ....+++.   .|++|++++.++.+.+.+.+...+.+..       .++.+..+|..+
T Consensus        60 l~~G~~VLDiGCG~G~~a~~~a~~---~g~~v~git~s~~Q~~~a~~~~~~~g~~-------~~v~~~~~d~~~  123 (285)
T d1kpga_          60 LQPGMTLLDVGCGWGATMMRAVEK---YDVNVVGLTLSKNQANHVQQLVANSENL-------RSKRVLLAGWEQ  123 (285)
T ss_dssp             CCTTCEEEEETCTTSHHHHHHHHH---HCCEEEEEESCHHHHHHHHHHHHTCCCC-------SCEEEEESCGGG
T ss_pred             CCCCCEEEEecCcchHHHHHHHhc---CCcceEEEeccHHHHHHHHHHHHhhhhh-------hhhHHHHhhhhc
Confidence            456888999997654 44444443   4899999999998887777666544322       236666666644

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=93.18  E-value=0.062  Score=29.72  Aligned_cols=40  Identities=20%  Similarity=0.109  Sum_probs=30.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      ++.+|=.||+.|   .+++.|+..|++|++++.+++..+.+.+
T Consensus        21 ~~~VLDiGcG~G---~~~~~l~~~g~~v~giD~s~~~i~~a~~   60 (225)
T d2p7ia1          21 PGNLLELGSFKG---DFTSRLQEHFNDITCVEASEEAISHAQG   60 (225)
T ss_dssp             SSCEEEESCTTS---HHHHHHTTTCSCEEEEESCHHHHHHHHH
T ss_pred             CCcEEEEeCCCc---HHHHHHHHcCCeEEEEeCcHHHhhhhhc
Confidence            667888888877   3567788889999999999876655543

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.07  E-value=0.27  Score=27.00  Aligned_cols=42  Identities=24%  Similarity=0.264  Sum_probs=29.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHH
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~   48 (85)
                      +. |++++=.||+.|+   ++..++..|+ +|+.++.++...+.+.+
T Consensus        47 l~-Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~   89 (197)
T d1ne2a_          47 IG-GRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKR   89 (197)
T ss_dssp             SB-TSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred             CC-CCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHH
Confidence            56 8999999988773   3344566665 69999999866554433

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=93.02  E-value=0.21  Score=26.01  Aligned_cols=33  Identities=27%  Similarity=0.408  Sum_probs=27.7

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCC--EEEEEecCc
Q 034737            8 SAFVTGGASGIGRALSLALAGKGV--FVTVVDLSE   40 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~   40 (85)
                      .+.|.|+++.+|.+++..++.++.  .++++|.+.
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~   36 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPD   36 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGG
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCC
Confidence            367899999999999999999875  688888643

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=92.88  E-value=0.14  Score=29.37  Aligned_cols=58  Identities=24%  Similarity=0.196  Sum_probs=38.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHH---hCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            6 GLSAFVTGGASGIGRALSLALA---GKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~---~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      ...+|=.||+.|.   ++..|+   ..+.+|+.+|.++..++.+.+.....+.+         +.+...|+.+
T Consensus        28 ~~~ILDiGcG~G~---~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~---------~~f~~~d~~~   88 (281)
T d2gh1a1          28 PVHIVDYGCGYGY---LGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYD---------SEFLEGDATE   88 (281)
T ss_dssp             CCEEEEETCTTTH---HHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSE---------EEEEESCTTT
T ss_pred             cCEEEEecCcCCH---HHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccc---------cccccccccc
Confidence            5678888887763   333343   35789999999988777776665543333         6666666654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.81  E-value=0.32  Score=25.69  Aligned_cols=48  Identities=8%  Similarity=0.004  Sum_probs=32.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHHHHHHHHHHhh
Q 034737            7 LSAFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNEVAALVEKENA   55 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~l~~~~~   55 (85)
                      |.+.|-|++|+||..+..-+.+.  .++|+.+.-+. ..+.+.+++.+..+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~-N~~~L~~q~~~f~p   51 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-NVTRMVEQCLEFSP   51 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-CHHHHHHHHHHHCC
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC-cHHHHHHHHHHHhh
Confidence            46899999999999999988775  35666654332 24455555554444

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.72  E-value=0.084  Score=29.85  Aligned_cols=31  Identities=16%  Similarity=0.211  Sum_probs=26.5

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|++ --|..++..|.+.|.+|+++.+.+
T Consensus         5 V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           5 VAIIGAG-PSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             EEEECCS-HHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            7788774 668899999999999999998875

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.63  E-value=0.41  Score=27.76  Aligned_cols=49  Identities=22%  Similarity=0.256  Sum_probs=34.5

Q ss_pred             CCCCcEEEEecCC-ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHh
Q 034737            3 LKPGLSAFVTGGA-SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKEN   54 (85)
Q Consensus         3 l~~~~~~litG~~-~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~   54 (85)
                      +.+|..+|=.||+ |++...++++   .|++|+.++.+++..+...+.....+
T Consensus        59 l~~G~~VLDiGCG~G~~~~~~a~~---~g~~v~git~s~~q~~~a~~~~~~~~  108 (291)
T d1kpia_          59 LEPGMTLLDIGCGWGSTMRHAVAE---YDVNVIGLTLSENQYAHDKAMFDEVD  108 (291)
T ss_dssp             CCTTCEEEEETCTTSHHHHHHHHH---HCCEEEEEESCHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEecCcchHHHHHHHHh---cCcceeeccchHHHHHHHHHHHHhhc
Confidence            4468899999987 4443333333   48999999999988777766665543

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=92.63  E-value=0.094  Score=29.06  Aligned_cols=31  Identities=26%  Similarity=0.330  Sum_probs=25.4

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|+ |--|...|.+|.++|++|.++.+++
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           3 VAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            677776 5558899999999999999997653

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.61  E-value=0.25  Score=28.26  Aligned_cols=43  Identities=21%  Similarity=0.108  Sum_probs=33.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      ++.+|=.||+.|.   ++..|+++|++|+.+|.++.-++.+.+...
T Consensus        57 ~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~   99 (292)
T d1xvaa_          57 CHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERW   99 (292)
T ss_dssp             CCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHH
Confidence            5678889988773   466778889999999999977666655443

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.61  E-value=0.055  Score=31.01  Aligned_cols=34  Identities=32%  Similarity=0.433  Sum_probs=26.7

Q ss_pred             cEEEEecCCChHHHH-----HHHHHHhCCCEEEEEecCcc
Q 034737            7 LSAFVTGGASGIGRA-----LSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         7 ~~~litG~~~gig~~-----~~~~l~~~g~~v~~~~~~~~   41 (85)
                      |.+.|.| -||.|+.     ++..|++.|++|.++|.+++
T Consensus         3 r~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ   41 (289)
T d2afhe1           3 RQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK   41 (289)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             cEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            4566776 7787775     57788999999999998864

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.36  E-value=0.28  Score=26.81  Aligned_cols=59  Identities=17%  Similarity=0.206  Sum_probs=37.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      +..+|=.||+.|.   ++..|+.+ +.+|.+++.++.-++.+.+.+...+..        .+.++.+|+.+
T Consensus        61 ~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~--------~~~f~~~d~~~  120 (222)
T d2ex4a1          61 TSCALDCGAGIGR---ITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKR--------VRNYFCCGLQD  120 (222)
T ss_dssp             CSEEEEETCTTTH---HHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGG--------EEEEEECCGGG
T ss_pred             CCEEEEeccCCCH---hhHHHHHhcCCEEEEeecCHHHhhcccccccccccc--------ccccccccccc
Confidence            4678888887763   45555544 457999999987777766655443322        15666666654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.28  E-value=0.36  Score=25.12  Aligned_cols=43  Identities=33%  Similarity=0.436  Sum_probs=30.5

Q ss_pred             EEEEecCCChHHHHHHHHHHhC---CCEEEEEecCccchHHHHHHHH
Q 034737            8 SAFVTGGASGIGRALSLALAGK---GVFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~---g~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      .+.|.|+++.+|.+++..|..+   ..++.++|..+ ..+....++.
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~   47 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLS   47 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHH
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHH
Confidence            3779999999999999887643   46799999764 3444433443

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.22  E-value=0.023  Score=29.67  Aligned_cols=38  Identities=13%  Similarity=0.163  Sum_probs=25.8

Q ss_pred             CCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHH
Q 034737           14 GASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus        14 ~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      |+|.+|+++++.|...+..+.+..|++++++.+.++..
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~   43 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG   43 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc
Confidence            55789999999886544334577899888888766543

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.18  E-value=0.25  Score=27.98  Aligned_cols=33  Identities=27%  Similarity=0.332  Sum_probs=27.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHh-CCCEEEEEe
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAG-KGVFVTVVD   37 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~-~g~~v~~~~   37 (85)
                      +. +++++|-|. +..|..+++.|.+ .|++|+.+.
T Consensus        30 l~-g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          30 LK-GKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             ST-TCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             cC-CCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            56 899999877 6799999999986 588887663

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.14  E-value=0.43  Score=25.60  Aligned_cols=62  Identities=15%  Similarity=0.119  Sum_probs=40.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      ++++++=.||+.|   .++..++..+.+|.+++.++...+.+.+.+...+..      ..++.+..+|+.+
T Consensus        52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~------~~~i~~~~~d~~~  113 (194)
T d1dusa_          52 KDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLD------NYDIRVVHSDLYE  113 (194)
T ss_dssp             TTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCT------TSCEEEEECSTTT
T ss_pred             CCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCc------cceEEEEEcchhh
Confidence            3678888887776   345566777889999999987776666555433221      1225666666543

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=91.94  E-value=0.14  Score=29.26  Aligned_cols=30  Identities=20%  Similarity=0.408  Sum_probs=25.5

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++|.|+ +..|...+.+++++|.+|+++.+.
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            677765 667889999999999999999864

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=91.86  E-value=0.32  Score=26.53  Aligned_cols=39  Identities=31%  Similarity=0.330  Sum_probs=30.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA   47 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~   47 (85)
                      ++.+|=.||+.|   ..+..|++.|++|+++|.++...+.+.
T Consensus        43 ~~~vLDiGcG~G---~~~~~l~~~~~~v~giD~s~~~l~~a~   81 (246)
T d2avna1          43 PCRVLDLGGGTG---KWSLFLQERGFEVVLVDPSKEMLEVAR   81 (246)
T ss_dssp             CCEEEEETCTTC---HHHHHHHTTTCEEEEEESCHHHHHHHH
T ss_pred             CCEEEEECCCCc---hhcccccccceEEEEeecccccccccc
Confidence            567888898877   456788889999999999986555444

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.83  E-value=0.58  Score=26.61  Aligned_cols=61  Identities=5%  Similarity=-0.061  Sum_probs=39.4

Q ss_pred             CCcEEEEecCCC-hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            5 PGLSAFVTGGAS-GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         5 ~~~~~litG~~~-gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      +|.+++-.+|+. .++..++++   ..++|+.++.++...+.+.+.+...+-.       .++.++..|..+
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a~~---~~~~V~avd~n~~a~~~~~~N~~~n~l~-------~~v~~~~~D~~~  168 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIAVY---GKAKVIAIEKDPYTFKFLVENIHLNKVE-------DRMSAYNMDNRD  168 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHHHH---TCCEEEEECCCHHHHHHHHHHHHHTTCT-------TTEEEECSCTTT
T ss_pred             CccEEEECcceEcHHHHHHHHh---CCcEEEEecCCHHHHHHHHHHHHHhCCC-------ceEEEEEcchHH
Confidence            477888888654 455444432   3368999999998777776666543322       226777777654

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.76  E-value=0.36  Score=26.69  Aligned_cols=36  Identities=28%  Similarity=0.200  Sum_probs=27.5

Q ss_pred             CcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            6 GLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         6 ~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      .++.++.|..  +|=|..++++|..+|++|.++.....
T Consensus        41 ~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~   78 (211)
T d2ax3a2          41 YRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKK   78 (211)
T ss_dssp             CEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSS
T ss_pred             CcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCcc
Confidence            4567777755  47899999999999999877755443

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.62  E-value=0.34  Score=23.41  Aligned_cols=36  Identities=11%  Similarity=0.077  Sum_probs=27.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      .+.+.+.|-.+.--.++|+.|..+|+.|...|+...
T Consensus         8 ~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~   43 (96)
T d1p3da1           8 VQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADG   43 (96)
T ss_dssp             CCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCS
T ss_pred             CCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCC
Confidence            567777776432225679999999999999998753

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.58  E-value=0.17  Score=27.27  Aligned_cols=36  Identities=28%  Similarity=0.350  Sum_probs=27.0

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV   46 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~   46 (85)
                      +.|.| .|-+|..++-.| .+|++|+++|.++...+.+
T Consensus         3 I~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHH
T ss_pred             EEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHH
Confidence            34445 588999999766 4799999999988655443

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.22  E-value=0.43  Score=24.89  Aligned_cols=24  Identities=25%  Similarity=0.408  Sum_probs=21.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCC
Q 034737            7 LSAFVTGGASGIGRALSLALAGKG   30 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g   30 (85)
                      ..+.|+|+++.+|.+++..|+..+
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHH
Confidence            468999999999999999998754

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=91.13  E-value=0.48  Score=26.42  Aligned_cols=60  Identities=25%  Similarity=0.201  Sum_probs=39.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCC
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVT   74 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~   74 (85)
                      ++.++..+|-.|++.|.-.++   |++.+.+|+.++.+++..+.+.+.+. ...+         +.++..|..
T Consensus        67 ~l~~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~-~~~n---------v~~~~~d~~  126 (224)
T d1vbfa_          67 DLHKGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLS-YYNN---------IKLILGDGT  126 (224)
T ss_dssp             TCCTTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHT-TCSS---------EEEEESCGG
T ss_pred             hhcccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHh-cccc---------cccccCchh
Confidence            345678899999888854444   44445789999998876666654433 2222         677777754

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=91.07  E-value=0.59  Score=25.11  Aligned_cols=44  Identities=20%  Similarity=0.306  Sum_probs=34.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l   50 (85)
                      ...++|.|+ +--|..-++-....|+.|.++|.+.+.++.+....
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~   75 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF   75 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhh
Confidence            346777766 66788888889999999999999988776655443

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.05  E-value=0.18  Score=26.35  Aligned_cols=30  Identities=13%  Similarity=0.154  Sum_probs=23.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEE
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVV   36 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~   36 (85)
                      ++.++|.|+ +.+|..++..|.+.|+++.++
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            567888866 788999999999999875444

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.01  E-value=0.11  Score=25.49  Aligned_cols=36  Identities=28%  Similarity=0.232  Sum_probs=26.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      +. ||.++|.|++. -|.-++..|+..+.++++..+..
T Consensus        30 f~-gK~VlVVG~g~-Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          30 FV-GESVLVVGGAS-SANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GT-TCCEEEECSSH-HHHHHHHHHTTTSCSSEEEECTT
T ss_pred             cC-CCeEEEECCCC-CHHHHHHHHHHhcCEEEEEEecC
Confidence            45 88999998754 36678889988887776665543

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.99  E-value=0.42  Score=25.17  Aligned_cols=36  Identities=22%  Similarity=0.325  Sum_probs=31.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL   38 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~   38 (85)
                      +|. |+++++.|..+.+..+++..+...|+++.++.-
T Consensus         1 sl~-gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P   36 (163)
T d1pvva2           1 TIK-GVKVVYVGDGNNVAHSLMIAGTKLGADVVVATP   36 (163)
T ss_dssp             CCT-TCEEEEESCCCHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CcC-CCEEEEECCCcHHHHHHHHHHHHcCCeEEEecc
Confidence            356 999999999889999999999999999887754

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.88  E-value=0.3  Score=27.52  Aligned_cols=34  Identities=24%  Similarity=0.307  Sum_probs=27.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHh-CCCEEEEEe
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAG-KGVFVTVVD   37 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~-~g~~v~~~~   37 (85)
                      +++ +++++|-| .+..|..+++.|.+ .|++|+.++
T Consensus        28 ~l~-g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPK-KATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTT-TCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcC-CCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            456 88888875 58899999999975 599987664

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.80  E-value=0.17  Score=29.13  Aligned_cols=31  Identities=16%  Similarity=0.156  Sum_probs=25.4

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|| |--|..+|++|++.|.+|.++..++
T Consensus         4 v~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           4 YIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            677766 5568899999999999999997654

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.79  E-value=0.23  Score=28.22  Aligned_cols=30  Identities=30%  Similarity=0.372  Sum_probs=24.1

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++|.|+ |--|...|.+|.++|.+|+++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            566766 445889999999999999999754

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=90.71  E-value=0.42  Score=22.83  Aligned_cols=43  Identities=26%  Similarity=0.257  Sum_probs=29.1

Q ss_pred             EEEEecCCChHHH-HHHHHHHhCCCEEEEEecCccchHHHHHHHHHHh
Q 034737            8 SAFVTGGASGIGR-ALSLALAGKGVFVTVVDLSEEKGNEVAALVEKEN   54 (85)
Q Consensus         8 ~~litG~~~gig~-~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~   54 (85)
                      .+-+.|- +|+|- ++|+.|.++|+.|...|+....   ..+.|...+
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~---~t~~L~~~G   46 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETE---RTAYLRKLG   46 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHTT
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCCh---hHHHHHHCC
Confidence            3455555 45555 7899999999999999987642   223455444

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.70  E-value=0.38  Score=26.80  Aligned_cols=31  Identities=23%  Similarity=0.233  Sum_probs=24.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEec
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDL   38 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~   38 (85)
                      +.++|.|+ |-=|...|.+|.+.|++|.++-.
T Consensus         6 ~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           6 GKVIIIGS-GVSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCCEEEEeC
Confidence            34777776 44478999999999999999854

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.60  E-value=0.36  Score=24.59  Aligned_cols=29  Identities=14%  Similarity=0.216  Sum_probs=24.9

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEE
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVV   36 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~   36 (85)
                      .+.|.|++|-.|+.+.+.+...++.++..
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            48899999999999999999999886543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=90.54  E-value=0.32  Score=27.04  Aligned_cols=34  Identities=29%  Similarity=0.339  Sum_probs=26.7

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG   43 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~   43 (85)
                      ++|.|+ +.-|...|..+.++|.+|+++.+++...
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G   40 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIG   40 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence            666765 4457788999999999999999886543

>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=90.29  E-value=0.2  Score=28.33  Aligned_cols=34  Identities=32%  Similarity=0.486  Sum_probs=25.9

Q ss_pred             cEEEEecCCChHHH-----HHHHHHHhCCCEEEEEecCcc
Q 034737            7 LSAFVTGGASGIGR-----ALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         7 ~~~litG~~~gig~-----~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      +.++++| -||.|+     .++..|+++|.+|.+++.++.
T Consensus         9 ~~i~~sG-KGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp~   47 (296)
T d1ihua1           9 PYLFFTG-KGGVGKTSISCATAIRLAEQGKRVLLVSTDPA   47 (296)
T ss_dssp             SEEEEEC-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             eEEEEEC-CCcChHHHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4566654 667666     467889999999999998864

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=90.24  E-value=0.22  Score=28.82  Aligned_cols=29  Identities=24%  Similarity=0.418  Sum_probs=24.3

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEec
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDL   38 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~   38 (85)
                      ++|.|+.-+ |..+|.+|++.|.+|+++.+
T Consensus         7 viIVGsG~a-G~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           7 VVIVGSGPI-GCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCEEEEECS
T ss_pred             EEEECcCHH-HHHHHHHHhhCCCeEEEEec
Confidence            777776444 88999999999999999965

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.14  E-value=0.26  Score=28.50  Aligned_cols=33  Identities=21%  Similarity=0.215  Sum_probs=26.8

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      -++|.|+ +--|..++.+|.+.|.+++++.++++
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            4777776 55578999999999999999988654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.13  E-value=0.64  Score=24.01  Aligned_cols=61  Identities=10%  Similarity=0.158  Sum_probs=38.6

Q ss_pred             CCCCcEEEEecCCCh-HHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            3 LKPGLSAFVTGGASG-IGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         3 l~~~~~~litG~~~g-ig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      +. |+.++=.++..| +|.    ..+.+|+ +|+.++.++...+.+.+.+...+..       .++.+++.|...
T Consensus        13 ~~-g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~-------~~~~ii~~D~~~   75 (152)
T d2esra1          13 FN-GGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAE-------NRFTLLKMEAER   75 (152)
T ss_dssp             CC-SCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCG-------GGEEEECSCHHH
T ss_pred             CC-CCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccc-------cchhhhcccccc
Confidence            34 777777776555 443    3455675 7999999988777776666543322       126777776543

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=90.10  E-value=0.26  Score=28.37  Aligned_cols=31  Identities=19%  Similarity=0.362  Sum_probs=25.5

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|+ +.-|...+..++++|++|+++.+.+
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677765 6668899999999999999998643

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.90  E-value=0.3  Score=26.20  Aligned_cols=31  Identities=16%  Similarity=0.318  Sum_probs=24.0

Q ss_pred             EEEecCCChHHHHHHHHHHhCCC-EEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~   40 (85)
                      ++|.|+ +--|...|..|.++|. +|+++.+++
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           3 VIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            667766 4457799999999996 699987754

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=89.65  E-value=0.35  Score=26.03  Aligned_cols=31  Identities=23%  Similarity=0.163  Sum_probs=26.0

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|+ +..|...+.++.+.|.+|.++.++.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            567766 6678899999999999999998753

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.60  E-value=0.44  Score=27.69  Aligned_cols=23  Identities=17%  Similarity=0.037  Sum_probs=20.6

Q ss_pred             ChHHHHHHHHHHhCCCEEEEEec
Q 034737           16 SGIGRALSLALAGKGVFVTVVDL   38 (85)
Q Consensus        16 ~gig~~~~~~l~~~g~~v~~~~~   38 (85)
                      |-.|.++++.++.+|+.|+++.+
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g   68 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYR   68 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             hHHHHHHHHHHHHcCCEEEEEec
Confidence            56999999999999999998864

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.56  E-value=0.94  Score=25.10  Aligned_cols=50  Identities=24%  Similarity=0.238  Sum_probs=37.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHh-CC----CEEEEEecCccchHHHHHHHH
Q 034737            2 ELKPGLSAFVTGGASGIGRALSLALAG-KG----VFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         2 ~l~~~~~~litG~~~gig~~~~~~l~~-~g----~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      ++.++..+|-.|+.+|.-.++.-+++. .|    .+|+.++++++-.+...+.+.
T Consensus        77 ~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~  131 (223)
T d1r18a_          77 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLN  131 (223)
T ss_dssp             TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             ccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhh
Confidence            355578999999999977777777664 44    489999999877666655543

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=89.43  E-value=0.43  Score=24.72  Aligned_cols=32  Identities=19%  Similarity=0.094  Sum_probs=24.0

Q ss_pred             ChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737           16 SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus        16 ~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      +-+|..++++|++.|+.+ +.+++.++.....+
T Consensus         9 G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~   40 (156)
T d2cvza2           9 GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQE   40 (156)
T ss_dssp             STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHH
Confidence            789999999999988765 56676665555444

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.41  E-value=0.36  Score=27.95  Aligned_cols=34  Identities=18%  Similarity=0.114  Sum_probs=24.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCcc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEE   41 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~   41 (85)
                      |.++|.|+ |--|..++..|++.|  .+|+++.++..
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            45666665 333668888888876  58999988753

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=89.35  E-value=0.25  Score=28.84  Aligned_cols=30  Identities=23%  Similarity=0.266  Sum_probs=24.6

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      +||.|+ +.-|..+|.+|++.|.+|+++.+.
T Consensus         5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence            667765 555889999999999999999764

>d1jzta_ c.104.1.1 (A:) Hypothetical protein YNL200c (YNU0_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein YNL200c (YNU0 YEAST)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.30  E-value=0.62  Score=26.30  Aligned_cols=33  Identities=18%  Similarity=0.037  Sum_probs=25.4

Q ss_pred             cEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecC
Q 034737            7 LSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         7 ~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++.++.|-.  +|=|..++++|..+|++|.++...
T Consensus        57 ~vlil~G~GNNGGDGl~~Ar~L~~~G~~V~v~~~~   91 (243)
T d1jzta_          57 HVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPK   91 (243)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred             eEEEEECCCCccHHHHHHHHHHHhcCCeeEEEEeC
Confidence            466777633  578899999999999998776544

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.11  E-value=0.7  Score=23.00  Aligned_cols=31  Identities=23%  Similarity=0.255  Sum_probs=25.9

Q ss_pred             cEEEEecCC---ChHHHHHHHHHHhCCCEEEEEe
Q 034737            7 LSAFVTGGA---SGIGRALSLALAGKGVFVTVVD   37 (85)
Q Consensus         7 ~~~litG~~---~gig~~~~~~l~~~g~~v~~~~   37 (85)
                      |.+.|.|++   +..|..+.+.|.+.|++|+.+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVn   35 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVN   35 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEc
Confidence            578889977   4589999999999999877664

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.07  E-value=1  Score=24.76  Aligned_cols=49  Identities=8%  Similarity=0.081  Sum_probs=33.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHh
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKEN   54 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~   54 (85)
                      .++++=+|+..|......-..+..+.+|+.++.+++..+.+...+...+
T Consensus        57 pk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~g  105 (214)
T d2cl5a1          57 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAG  105 (214)
T ss_dssp             CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcC
Confidence            4788999987775432222222346799999999887777777666554

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=88.87  E-value=0.36  Score=23.78  Aligned_cols=34  Identities=18%  Similarity=0.188  Sum_probs=25.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHh---CCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAG---KGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~---~g~~v~~~~~~~   40 (85)
                      .+.++|.|+ +.+|..++..|..   .|.+|.++.+.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            367888876 7788888876554   588999998764

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=88.40  E-value=0.7  Score=22.72  Aligned_cols=34  Identities=21%  Similarity=0.110  Sum_probs=24.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHH---hCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALA---GKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~---~~g~~v~~~~~~~   40 (85)
                      .+.++|.|+ +.+|..++..|.   .++.+|.++.+.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            357788876 888888886554   4566899888754

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=88.14  E-value=1.4  Score=25.25  Aligned_cols=60  Identities=15%  Similarity=0.113  Sum_probs=37.6

Q ss_pred             cEEEEecCCCh-HHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            7 LSAFVTGGASG-IGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         7 ~~~litG~~~g-ig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      +.++-.|+++| |+..+++   ...++|+.+|.++..++-+.+.....+...       ++.++..|+.++
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~-------~~~i~~~~~~~~  172 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSD-------RFFVRKGEFLEP  172 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTT-------SEEEEESSTTGG
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCc-------eeEEeecccccc
Confidence            34554454444 5555542   256789999999988887777766543321       266677777654

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=88.07  E-value=1.3  Score=25.38  Aligned_cols=59  Identities=15%  Similarity=0.115  Sum_probs=40.4

Q ss_pred             EEEEec-CCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            8 SAFVTG-GASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         8 ~~litG-~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      .++=.| |+|.|+.+++..+  ....|+.+|.++..++-+.+.....+..        ++.++..|+.++
T Consensus       111 ~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~--------~v~~~~~d~~~~  170 (274)
T d2b3ta1         111 RILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIK--------NIHILQSDWFSA  170 (274)
T ss_dssp             EEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCC--------SEEEECCSTTGG
T ss_pred             ceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcc--------cceeeecccccc
Confidence            455556 4456777766654  3579999999998888777776554431        288888888654

>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Escherichia coli [TaxId: 562]

Probab=87.85  E-value=1.5  Score=26.90  Aligned_cols=33  Identities=21%  Similarity=0.201  Sum_probs=24.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEec
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDL   38 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~   38 (85)
                      ++..+++..+|.-|.+.+..+...+ .+++++.-
T Consensus       125 ~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~~vl~P  158 (428)
T d1vb3a1         125 KPVTILTATSGDTGAAVAHAFYGLPNVKVVILYP  158 (428)
T ss_dssp             CCEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEE
T ss_pred             ccceeeecCCCCcchhHHHHHhCccccceEEEec
Confidence            4456677788889999999999765 56666643

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.73  E-value=0.34  Score=27.90  Aligned_cols=30  Identities=33%  Similarity=0.393  Sum_probs=25.2

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++|.|+ +..|...+.++.++|.+|+++.+.
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            677765 677889999999999999999764

>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Staphylococcus xylosus [TaxId: 1288]

Probab=87.28  E-value=0.24  Score=26.59  Aligned_cols=27  Identities=37%  Similarity=0.719  Sum_probs=21.4

Q ss_pred             CcEEEEecCCChHHHH-HHHHHHhCCCEE
Q 034737            6 GLSAFVTGGASGIGRA-LSLALAGKGVFV   33 (85)
Q Consensus         6 ~~~~litG~~~gig~~-~~~~l~~~g~~v   33 (85)
                      |+-++++|- +|.|++ ++..|+++|+.+
T Consensus        15 g~gvli~G~-sg~GKS~la~~l~~~g~~l   42 (169)
T d1ko7a2          15 GVGVLITGD-SGIGKSETALELIKRGHRL   42 (169)
T ss_dssp             TEEEEEEES-TTSSHHHHHHHHHHTTCEE
T ss_pred             CEEEEEEeC-CCCCHHHHHHHHHHcCCeE
Confidence            777888876 667885 888999999864

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.23  E-value=0.65  Score=24.99  Aligned_cols=31  Identities=19%  Similarity=0.286  Sum_probs=25.6

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|+ +.-|...+.++++.|.+|++++..+
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            677776 4558999999999999999998654

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=87.20  E-value=0.7  Score=21.56  Aligned_cols=34  Identities=32%  Similarity=0.324  Sum_probs=28.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      |++.|.|+ |-+|+-++..-.+.|.++++++-+++
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            46777765 88999999999999999999987653

>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: D-Alanine ligase N-terminal domain
domain: D-Ala-D-Ala ligase, N-domain
species: Escherichia coli, gene ddlB [TaxId: 562]

Probab=87.17  E-value=0.89  Score=21.95  Aligned_cols=37  Identities=30%  Similarity=0.294  Sum_probs=29.4

Q ss_pred             CcEEEEecCCCh-------HHHHHHHHHHhCCCEEEEEecCccc
Q 034737            6 GLSAFVTGGASG-------IGRALSLALAGKGVFVTVVDLSEEK   42 (85)
Q Consensus         6 ~~~~litG~~~g-------ig~~~~~~l~~~g~~v~~~~~~~~~   42 (85)
                      .|++++.|+.+.       -|+++.+.|-+.++++..++.+...
T Consensus         3 ~kI~vl~GG~S~E~~iSl~Sa~~v~~~L~~~~~~v~~i~~~~~~   46 (96)
T d1iowa1           3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVD   46 (96)
T ss_dssp             CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSC
T ss_pred             ceEEEEeCcCchhhHhHHhhHHHHHHHHHHcCeeEeeecCcccc
Confidence            689999998864       3577778888899999988876543

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.10  E-value=1.1  Score=23.00  Aligned_cols=64  Identities=16%  Similarity=0.072  Sum_probs=45.3

Q ss_pred             CcEEEEecCC---ChHHHHHHHHHHhCCCEEEEEec----------------------------CccchHHHHHHHHHHh
Q 034737            6 GLSAFVTGGA---SGIGRALSLALAGKGVFVTVVDL----------------------------SEEKGNEVAALVEKEN   54 (85)
Q Consensus         6 ~~~~litG~~---~gig~~~~~~l~~~g~~v~~~~~----------------------------~~~~~~~~~~~l~~~~   54 (85)
                      .|.+.|.|++   +..|..+.+.|...|++|+.+.-                            .++......+++.+.+
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i~vp~~~~~~~~~e~~~~g   98 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAIKKG   98 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCHHHHHHHHHHHHHHT
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEEEeCHHHHHHHHHHHHHhC
Confidence            5789999988   46999999999999998776632                            1234555556665555


Q ss_pred             hhccCCCCCCceEEEEecCCCHHH
Q 034737           55 AKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus        55 ~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      ..         ..+++....+++.
T Consensus        99 ~k---------~v~~~~G~~~ee~  113 (139)
T d2d59a1          99 AK---------VVWFQYNTYNREA  113 (139)
T ss_dssp             CS---------EEEECTTCCCHHH
T ss_pred             CC---------EEEEeccccCHHH
Confidence            44         6777777766655

>d1im5a_ c.33.1.3 (A:) Pyrazinamidase/nicotinamidase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Isochorismatase-like hydrolases
superfamily: Isochorismatase-like hydrolases
family: Isochorismatase-like hydrolases
domain: Pyrazinamidase/nicotinamidase
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=86.99  E-value=1.2  Score=23.30  Aligned_cols=47  Identities=15%  Similarity=0.176  Sum_probs=32.5

Q ss_pred             cEEEEecCCChHHH-HHHHHHHhCCCEEEEE-----ecCccchHHHHHHHHHH
Q 034737            7 LSAFVTGGASGIGR-ALSLALAGKGVFVTVV-----DLSEEKGNEVAALVEKE   53 (85)
Q Consensus         7 ~~~litG~~~gig~-~~~~~l~~~g~~v~~~-----~~~~~~~~~~~~~l~~~   53 (85)
                      ++++|+|....++- ++++....+|++|+++     +++++.-+.....+...
T Consensus       120 ~~liv~G~~t~~CV~~T~~~a~~~g~~V~vv~Da~~s~~~~~h~~al~~l~~~  172 (179)
T d1im5a_         120 KRVYICGVATEYCVRATALDALKHGFEVYLLRDAVKGIKPEDEERALEEMKSR  172 (179)
T ss_dssp             CEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHT
T ss_pred             CEEEEEEeccchhHHHHHHHHHHcCCEEEEeccccCCCCHHHHHHHHHHHHHC
Confidence            47999997776555 7888899999998776     34544445555555543

>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Mycoplasma pneumoniae [TaxId: 2104]

Probab=86.88  E-value=0.29  Score=26.54  Aligned_cols=28  Identities=36%  Similarity=0.650  Sum_probs=21.7

Q ss_pred             CcEEEEecCCChHHHH-HHHHHHhCCCEEE
Q 034737            6 GLSAFVTGGASGIGRA-LSLALAGKGVFVT   34 (85)
Q Consensus         6 ~~~~litG~~~gig~~-~~~~l~~~g~~v~   34 (85)
                      |+-++++|- +|.|++ ++..|..+|+.++
T Consensus        15 g~gvli~G~-sG~GKS~lal~l~~~G~~lv   43 (177)
T d1knxa2          15 GVGVLLTGR-SGIGKSECALDLINKNHLFV   43 (177)
T ss_dssp             TEEEEEEES-SSSSHHHHHHHHHTTTCEEE
T ss_pred             CEEEEEEcC-CCCCHHHHHHHHHHcCCcee
Confidence            677888865 677884 8889999999644

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=86.81  E-value=0.57  Score=26.84  Aligned_cols=30  Identities=30%  Similarity=0.399  Sum_probs=24.7

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++|.|+ +.-|...|..++++|.+|+++...
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~   37 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLI   37 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecC
Confidence            677765 566889999999999999999754

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=86.59  E-value=0.42  Score=27.86  Aligned_cols=30  Identities=27%  Similarity=0.412  Sum_probs=24.6

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++|.|+ +--|..+|.+|++.|.+|+++.+.
T Consensus        10 vIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1          10 ALVIGS-GYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            677766 445789999999999999999764

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.42  E-value=1  Score=24.69  Aligned_cols=42  Identities=7%  Similarity=-0.031  Sum_probs=30.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALV   50 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l   50 (85)
                      |+.+|=.|++.|+   .+..+++.+ .++++++.++..++.+.+..
T Consensus        54 g~~VLdIGcG~G~---~a~~~a~~~~~~v~~id~s~~~~~~a~~~~   96 (229)
T d1zx0a1          54 GGRVLEVGFGMAI---AASKVQEAPIDEHWIIECNDGVFQRLRDWA   96 (229)
T ss_dssp             CEEEEEECCTTSH---HHHHHHTSCEEEEEEEECCHHHHHHHHHHG
T ss_pred             CCeEEEeeccchH---HHHHHHHcCCCeEEEeCCCHHHHHHHHHHh
Confidence            6788999988774   456666654 57999999987666665443

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.28  E-value=0.95  Score=24.75  Aligned_cols=32  Identities=28%  Similarity=0.377  Sum_probs=24.7

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc
Q 034737            8 SAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE   40 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~   40 (85)
                      .++|.|+ |--|..++..|.+.|. +|.++.+.+
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            3777776 4447889999999995 888888764

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.23  E-value=0.55  Score=25.18  Aligned_cols=31  Identities=19%  Similarity=0.261  Sum_probs=25.5

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|+ +..|...+..+.+.|.+|+++++..
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            667766 5568999999999999999998754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=86.15  E-value=1.5  Score=23.72  Aligned_cols=41  Identities=17%  Similarity=0.161  Sum_probs=32.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737            7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA   48 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~   48 (85)
                      ..++|.|+ +-.|..-++--...|+.|.++|.+...++.+.+
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~   70 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES   70 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence            35677765 667888888888999999999999887776654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.14  E-value=1  Score=23.43  Aligned_cols=34  Identities=15%  Similarity=-0.011  Sum_probs=24.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~   40 (85)
                      ++.++|.|+ +..+.-.+..+.+.|++ |.++.|..
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            345666655 66777888888999875 76777653

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.82  E-value=2.1  Score=24.90  Aligned_cols=60  Identities=17%  Similarity=0.044  Sum_probs=39.2

Q ss_pred             CCcEEEEecCCCh-HHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            5 PGLSAFVTGGASG-IGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         5 ~~~~~litG~~~g-ig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      +++.++=.++..| ++.    .++..|+ .|+.++.++..++.+.+.+...+...       ++.++..|+.+
T Consensus       145 ~g~~VLDl~~g~G~~si----~~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~-------~~~~~~~d~~~  206 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAI----HAAIAGADEVIGIDKSPRAIETAKENAKLNGVED-------RMKFIVGSAFE  206 (324)
T ss_dssp             TTCEEEETTCTTTHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGG-------GEEEEESCHHH
T ss_pred             CCCeeecccCcccchhh----hhhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCc-------cceeeechhhh
Confidence            3677887776544 433    3445565 79999999988888777766544321       26677777654

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.81  E-value=2.7  Score=26.37  Aligned_cols=69  Identities=12%  Similarity=-0.001  Sum_probs=42.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHh-CCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737            7 LSAFVTGGASGIGRALSLALAG-KGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR   84 (85)
Q Consensus         7 ~~~litG~~~gig~~~~~~l~~-~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~   84 (85)
                      +..+++..+|.-|.+.+..+.. .+.+|++++-...-.+-...++.....        .++..+.+| .+.++ +.++++
T Consensus       152 ~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~--------~Nv~~i~v~-G~fDDcq~~vk~  222 (511)
T d1kl7a_         152 QITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPD--------ENVQTLSVT-GTFDNCQDIVKA  222 (511)
T ss_dssp             CEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCC--------TTEEEEEES-SCHHHHHHHHHH
T ss_pred             eEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCchHHHHHHhhcCC--------ceEEEEEec-cChHHHHHHHHH
Confidence            4455566667799999999885 456777776554333444445543221        127777766 45666 666553

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=85.68  E-value=0.41  Score=25.32  Aligned_cols=33  Identities=9%  Similarity=0.061  Sum_probs=25.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++-++|.|+ +..|...+..+.+.|.+|+++++.
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence            345777776 456888999999999999998753

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=85.57  E-value=0.8  Score=23.77  Aligned_cols=29  Identities=21%  Similarity=0.320  Sum_probs=23.4

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEec
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDL   38 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~   38 (85)
                      ++|.|+ +-.|...+..+.+.|.+++++.+
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~   32 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGE   32 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEE
Confidence            566655 56677899999999999999875

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=85.56  E-value=0.66  Score=25.81  Aligned_cols=31  Identities=32%  Similarity=0.311  Sum_probs=24.9

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|+.. -|...+.++++.|.+|.++.++.
T Consensus         4 viVIG~G~-aG~~aA~~aa~~G~~V~liE~~~   34 (259)
T d1onfa1           4 LIVIGGGS-GGMAAARRAARHNAKVALVEKSR   34 (259)
T ss_dssp             EEEECCSH-HHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCCH-HHHHHHHHHHHCCCeEEEEecCC
Confidence            56666644 48899999999999999998753

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.36  E-value=0.43  Score=29.98  Aligned_cols=33  Identities=15%  Similarity=0.229  Sum_probs=27.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS   39 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~   39 (85)
                      +..+++.|+ +|+|..+++.|+..|. ++.++|.+
T Consensus        25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            457888876 8999999999999996 67787653

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.33  E-value=0.95  Score=24.21  Aligned_cols=31  Identities=29%  Similarity=0.281  Sum_probs=25.4

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|+ +-.|...+..+.+.|.+|.++....
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~~   36 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESHK   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            566665 6689999999999999999997653

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=85.29  E-value=0.79  Score=24.64  Aligned_cols=35  Identities=23%  Similarity=0.233  Sum_probs=27.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      +. ||.++|.|++.. |--++..++..+.++..+.+.
T Consensus        30 ~~-gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          30 FS-GQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CB-TCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESS
T ss_pred             CC-CCEEEEECCCcc-HHHHHHHHHhhhccccccccc
Confidence            56 899999987554 778888999999887777654

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=85.03  E-value=0.74  Score=26.22  Aligned_cols=31  Identities=16%  Similarity=0.279  Sum_probs=23.8

Q ss_pred             EEEecCCChHHHHHHHHHH-----hCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALA-----GKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~-----~~g~~v~~~~~~~   40 (85)
                      ++|.|| +-.|..+|..|+     +.|.+|+++.+.+
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            677776 556778888885     5799999998754

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=85.00  E-value=1.9  Score=23.85  Aligned_cols=62  Identities=16%  Similarity=0.206  Sum_probs=34.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      +...++++=.||+.|.   ++..++++  +..+++++. ++..+.....+...+..       .++.++..|+.+
T Consensus        78 ~~~~~~VLDvGcG~G~---~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-------~rv~~~~~D~~~  141 (253)
T d1tw3a2          78 WTNVRHVLDVGGGKGG---FAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLS-------DRVDVVEGDFFE  141 (253)
T ss_dssp             CTTCSEEEEETCTTSH---HHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCT-------TTEEEEECCTTS
T ss_pred             CccCCEEEEeCCCCCH---HHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcc-------cchhhccccchh
Confidence            3334678878877662   33344443  457777886 44455555555443322       226677766643

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=84.99  E-value=0.59  Score=27.30  Aligned_cols=59  Identities=17%  Similarity=0.025  Sum_probs=39.7

Q ss_pred             CcEEEEecCCCh-HHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            6 GLSAFVTGGASG-IGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         6 ~~~~litG~~~g-ig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      |+.++=.++..| ++.+    ++..+.+|+.+|.++..++.+.+.+...+..        ++.++..|..+.
T Consensus       146 g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~--------~~~~i~~d~~~~  205 (318)
T d1wxxa2         146 GERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLG--------NVRVLEANAFDL  205 (318)
T ss_dssp             EEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCT--------TEEEEESCHHHH
T ss_pred             CCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCC--------CcceeeccHHHH
Confidence            667777775544 4333    4455678999999998888887776654422        277788877653

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=84.76  E-value=0.79  Score=26.29  Aligned_cols=31  Identities=19%  Similarity=0.037  Sum_probs=22.5

Q ss_pred             EEEEecCCChH---HHHHHHHHHhCCCEEEEEec
Q 034737            8 SAFVTGGASGI---GRALSLALAGKGVFVTVVDL   38 (85)
Q Consensus         8 ~~litG~~~gi---g~~~~~~l~~~g~~v~~~~~   38 (85)
                      +++.++|++|-   -.++++.|.++|++|.++..
T Consensus         3 il~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           3 VLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            45556676552   23689999999999988763

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=84.69  E-value=0.91  Score=25.46  Aligned_cols=32  Identities=19%  Similarity=0.331  Sum_probs=25.3

Q ss_pred             EEEEecCCChHHHHHHHHHHh-CCCEEEEEecCc
Q 034737            8 SAFVTGGASGIGRALSLALAG-KGVFVTVVDLSE   40 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~-~g~~v~~~~~~~   40 (85)
                      -++|.|+ +--|...+.+|++ .|.+|.++++.+
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            3778877 4557889999987 499999998764

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.54  E-value=1.3  Score=22.36  Aligned_cols=34  Identities=26%  Similarity=0.229  Sum_probs=24.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHH----hCCCEEEEEecCc
Q 034737            6 GLSAFVTGGASGIGRALSLALA----GKGVFVTVVDLSE   40 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~----~~g~~v~~~~~~~   40 (85)
                      .+.++|.|+ +.+|-.++..|.    ..|.+|.++.+++
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            467778866 777877777765    4588998887654

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.45  E-value=2.5  Score=24.58  Aligned_cols=78  Identities=8%  Similarity=-0.019  Sum_probs=42.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhc-cCCCCCCceEEEEecCCCHHH-H
Q 034737            3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKF-HSNLGFPSAMFIRCDVTNTKF-A   79 (85)
Q Consensus         3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~Dv~~~~~-~   79 (85)
                      +.++.+++=.||+.|  ..+.......++ +++.++.++...+-+...+.+..... ..+....++.++.+|+.+... +
T Consensus       149 l~~~~~vlD~GcG~G--~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~~~~~~  226 (328)
T d1nw3a_         149 MTDDDLFVDLGSGVG--QVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRE  226 (328)
T ss_dssp             CCTTCEEEEETCTTS--HHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTSHHHHH
T ss_pred             CCCCCEEEEcCCCCC--HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccccccccc
Confidence            444677888887655  222222233454 69999998865554444433211100 001122348899999988776 5


Q ss_pred             HHh
Q 034737           80 LAF   82 (85)
Q Consensus        80 ~~~   82 (85)
                      ..+
T Consensus       227 ~~~  229 (328)
T d1nw3a_         227 RIA  229 (328)
T ss_dssp             HHH
T ss_pred             ccC
Confidence            544

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.36  E-value=0.63  Score=25.25  Aligned_cols=30  Identities=30%  Similarity=0.267  Sum_probs=24.2

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++|.|+.. -|...+.++++.|.+|.++...
T Consensus         6 viVIG~Gp-aGl~aA~~aa~~G~kV~viE~~   35 (235)
T d1h6va1           6 LIIIGGGS-GGLAAAKEAAKFDKKVMVLDFV   35 (235)
T ss_dssp             EEEECCSH-HHHHHHHHHGGGCCCEEEECCC
T ss_pred             EEEECCCH-HHHHHHHHHHHCCCeEEEEecc
Confidence            56776644 4889999999999999999854

>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA adenine dimethylase-like
domain: rRNA adenine dimethylase
species: Bacillus subtilis, Ermc' [TaxId: 1423]

Probab=84.18  E-value=0.89  Score=25.43  Aligned_cols=59  Identities=15%  Similarity=0.257  Sum_probs=39.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      ++.+++=.|++.|   ++.+.|+..+.+|+++..++.-.+.+.+... .+         +++.++.+|+.+.
T Consensus        21 ~~d~VlEIGpG~G---~LT~~Ll~~~~~v~avE~D~~l~~~l~~~~~-~~---------~n~~i~~~D~l~~   79 (235)
T d1qama_          21 EHDNIFEIGSGKG---HFTLELVQRCNFVTAIEIDHKLCKTTENKLV-DH---------DNFQVLNKDILQF   79 (235)
T ss_dssp             TTCEEEEECCTTS---HHHHHHHHHSSEEEEECSCHHHHHHHHHHTT-TC---------CSEEEECCCGGGC
T ss_pred             CCCeEEEECCCch---HHHHHHHhCcCceEEEeeccchHHHHHHHhh-cc---------cchhhhhhhhhhc
Confidence            3667777776655   4677788888999999988754444433221 12         2388888888653

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.18  E-value=0.074  Score=29.05  Aligned_cols=24  Identities=21%  Similarity=0.223  Sum_probs=19.9

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCE
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVF   32 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~   32 (85)
                      .++|.|+ +-+|..+|.+|+++|++
T Consensus         2 kV~VIGa-Gi~GlstA~~L~~~G~~   25 (246)
T d1kifa1           2 RVVVIGA-GVIGLSTALCIHERYHS   25 (246)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHTT
T ss_pred             EEEEECc-hHHHHHHHHHHHHCCCC
Confidence            3777766 77899999999999874

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=84.10  E-value=2.4  Score=24.17  Aligned_cols=43  Identities=16%  Similarity=0.205  Sum_probs=29.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC-C-CEEEEEecCccchHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK-G-VFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~-g-~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      .+.++|.|++.|   .+++.+++. + .+|.++..+++-.+-+.+.+.
T Consensus        76 p~~vLiiGgG~G---~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~  120 (274)
T d1iy9a_          76 PEHVLVVGGGDG---GVIREILKHPSVKKATLVDIDGKVIEYSKKFLP  120 (274)
T ss_dssp             CCEEEEESCTTC---HHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCH
T ss_pred             cceEEecCCCCc---HHHHHHHhcCCcceEEEecCCHHHHHHHHHhCh
Confidence            467888887766   346666654 2 479999999876666655543

>d2gcxa1 b.34.1.2 (A:1-75) Ferrous iron transport protein A, FeoA {Klebsiella pneumoniae [TaxId: 573]}

class: All beta proteins
fold: SH3-like barrel
superfamily: C-terminal domain of transcriptional repressors
family: FeoA-like
domain: Ferrous iron transport protein A, FeoA
species: Klebsiella pneumoniae [TaxId: 573]

Probab=84.08  E-value=0.57  Score=21.63  Aligned_cols=39  Identities=26%  Similarity=0.303  Sum_probs=30.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHhCCC----EEEEEecC
Q 034737            1 MELKPGLSAFVTGGASGIGRALSLALAGKGV----FVTVVDLS   39 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~----~v~~~~~~   39 (85)
                      |.|.|++.+.|+|-......++-++|..-|.    .|.++.+.
T Consensus         1 ~~l~pg~~~~I~g~~~~~~~~~~~RL~~mGl~pG~~V~v~~~a   43 (75)
T d2gcxa1           1 MQFTPDSAWKITGFSRDISPAYRQKLLSLGMLPGSSFHVVRVA   43 (75)
T ss_dssp             CCCCTTSEEEEECCCSSCCHHHHHHHTTTTCCSSEEEEECCCC
T ss_pred             CccCCCCcEEEEEecccCCHHHHHHHHHcCCCCCCEEEEEEEC
Confidence            5677899999999988888889999998775    45555443

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=84.04  E-value=1.4  Score=23.67  Aligned_cols=44  Identities=14%  Similarity=0.086  Sum_probs=26.8

Q ss_pred             HHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737           23 SLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF   78 (85)
Q Consensus        23 ~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   78 (85)
                      .+.++.++.+|+.+|+++.....+.+.   ...+         +.++..++++.+.
T Consensus        33 s~~iL~~~~~viaiD~D~~ai~~a~~~---~~~~---------~~~~~~~f~~~~~   76 (182)
T d1wg8a2          33 ARGILERGGRVIGLDQDPEAVARAKGL---HLPG---------LTVVQGNFRHLKR   76 (182)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHT---CCTT---------EEEEESCGGGHHH
T ss_pred             HHHHhcccCcEEEEhhhhhHHHHHhhc---cccc---------eeEeehHHHHHHH
Confidence            345556677999999999766554331   1112         6666666665443

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=83.99  E-value=0.73  Score=24.83  Aligned_cols=31  Identities=16%  Similarity=0.255  Sum_probs=25.8

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|+ +-.|...+..+.+.|.+|.++.++.
T Consensus         8 lvVIG~-GpaGl~aA~~aa~~G~~V~liE~~~   38 (220)
T d1lvla1           8 LLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQA   38 (220)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            677775 5678999999999999999998753

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.79  E-value=0.93  Score=24.15  Aligned_cols=31  Identities=26%  Similarity=0.309  Sum_probs=24.8

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|+ +..|...+..+.+.|.+|.++.+..
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~~   36 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKGN   36 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecCC
Confidence            566665 4558899999999999999998653

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=83.59  E-value=1.9  Score=22.62  Aligned_cols=45  Identities=18%  Similarity=0.093  Sum_probs=30.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE   53 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~   53 (85)
                      +..++=.++..|.   ++-..+.+|++++.++.++...+.+.+.+...
T Consensus        42 g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~   86 (171)
T d1ws6a1          42 RGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRT   86 (171)
T ss_dssp             CCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHH
T ss_pred             CCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhh
Confidence            5566666655542   33456678999999999998777777666544

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=83.23  E-value=0.98  Score=25.95  Aligned_cols=32  Identities=28%  Similarity=0.292  Sum_probs=23.0

Q ss_pred             cEEEEecCCCh---HHHHHHHHHHhCCCEEEEEec
Q 034737            7 LSAFVTGGASG---IGRALSLALAGKGVFVTVVDL   38 (85)
Q Consensus         7 ~~~litG~~~g---ig~~~~~~l~~~g~~v~~~~~   38 (85)
                      |..+.+++++|   --.++++.|.++|++|.++..
T Consensus         2 rIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~   36 (401)
T d1rrva_           2 RVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAP   36 (401)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             eEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            35566666654   234788999999999988864

>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA adenine dimethylase-like
domain: Probable dimethyladenosine transferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.20  E-value=1.3  Score=25.48  Aligned_cols=61  Identities=18%  Similarity=0.170  Sum_probs=39.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT   76 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~   76 (85)
                      +.+++=.|.+.|   ++.+.|++.+.+|+++-.++.-.+.+.+........       .++.++.+|+...
T Consensus        22 ~d~VlEIGPG~G---~LT~~Ll~~~~~v~aiE~D~~l~~~L~~~~~~~~~~-------~~~~~i~~D~l~~   82 (278)
T d1zq9a1          22 TDVVLEVGPGTG---NMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVA-------SKLQVLVGDVLKT   82 (278)
T ss_dssp             TCEEEEECCTTS---TTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTG-------GGEEEEESCTTTS
T ss_pred             CCEEEEECCCch---HHHHHHHhcCCcEEEEEEccchhHHHHHHHhhhccc-------cchhhhHHHHhhh
Confidence            556666665544   457777888889999998886555555544322111       1288888888653

>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Molybdopterin-guanine dinucleotide biosynthesis protein MobB
species: Escherichia coli [TaxId: 562]

Probab=82.94  E-value=1.6  Score=22.06  Aligned_cols=34  Identities=12%  Similarity=0.094  Sum_probs=25.1

Q ss_pred             cEEEEecCCCh----HHHHHHHHHHhCCCEEEEEecCc
Q 034737            7 LSAFVTGGASG----IGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         7 ~~~litG~~~g----ig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      .++.|||-++.    +...++++|..+|.++.+...+.
T Consensus         3 Pvi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~~d~   40 (170)
T d1np6a_           3 PLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTH   40 (170)
T ss_dssp             CEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             CEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEecccc
Confidence            37889985542    66777788888999988776554

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=82.89  E-value=1.4  Score=23.86  Aligned_cols=31  Identities=29%  Similarity=0.409  Sum_probs=25.4

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~   40 (85)
                      ++|.|+ +.-|...+..+.+.|.+|+++.+.+
T Consensus         9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            566665 5568899999999999999998764

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.87  E-value=2.9  Score=24.18  Aligned_cols=69  Identities=10%  Similarity=0.068  Sum_probs=38.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHHHhhhc-cC-------------CCCCCceEEE
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKF-HS-------------NLGFPSAMFI   69 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~~~~~~-~~-------------~~~~~~~~~~   69 (85)
                      .+.++|.|++.|   .+++.+++..  .+|.++..++.-.+-+.+.+....... ++             .....+...+
T Consensus        90 pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvI  166 (295)
T d1inla_          90 PKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI  166 (295)
T ss_dssp             CCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred             CceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhcCCCCCCEE
Confidence            467888887666   4466666643  579999999876665555443221110 11             0123457788


Q ss_pred             EecCCCHH
Q 034737           70 RCDVTNTK   77 (85)
Q Consensus        70 ~~Dv~~~~   77 (85)
                      .+|+.|+.
T Consensus       167 i~D~~dp~  174 (295)
T d1inla_         167 IIDSTDPT  174 (295)
T ss_dssp             EEEC----
T ss_pred             EEcCCCCC
Confidence            88888764

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=82.83  E-value=1.7  Score=22.08  Aligned_cols=30  Identities=27%  Similarity=0.297  Sum_probs=22.6

Q ss_pred             EEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      .++|.|+ +.+|..++..|. ++.+|.++++.
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~   31 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKE   31 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEecc
Confidence            3566665 678889998886 47799988764

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=82.79  E-value=2.2  Score=22.68  Aligned_cols=59  Identities=8%  Similarity=0.023  Sum_probs=36.7

Q ss_pred             CcEEEEecCC-ChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737            6 GLSAFVTGGA-SGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN   75 (85)
Q Consensus         6 ~~~~litG~~-~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~   75 (85)
                      ++.++=..+. |++|.    ..+.+|+ .|+.++.+....+.+.+.+...+...       ++.++..|+.+
T Consensus        42 ~~~vLDlfaGsG~~g~----ea~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~-------~~~i~~~D~~~  102 (182)
T d2fhpa1          42 GGMALDLYSGSGGLAI----EAVSRGMDKSICIEKNFAALKVIKENIAITKEPE-------KFEVRKMDANR  102 (182)
T ss_dssp             SCEEEETTCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGG-------GEEEEESCHHH
T ss_pred             CCEEEEcccccccccc----eeeecchhHHHHHHHHHHHHHHHHHHhhhhhccc-------ccccccccchh
Confidence            5555554443 44544    4556777 59999999887777777665443321       26777777643

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.51  E-value=1.2  Score=26.49  Aligned_cols=31  Identities=19%  Similarity=0.283  Sum_probs=23.7

Q ss_pred             EEEecCCChHHHHHHHHHHh------CCCEEEEEecCc
Q 034737            9 AFVTGGASGIGRALSLALAG------KGVFVTVVDLSE   40 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~------~g~~v~~~~~~~   40 (85)
                      ++|.|+ +--|...|..|++      +|.+|+++.+..
T Consensus        35 ViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~   71 (380)
T d2gmha1          35 VVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAA   71 (380)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCC
Confidence            677776 3347788888886      899999998764

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.93  E-value=0.73  Score=24.45  Aligned_cols=32  Identities=6%  Similarity=0.021  Sum_probs=24.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCCCEEEEEec
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDL   38 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~   38 (85)
                      .+.++|.|+ +..|...|..+.+.|.+++++++
T Consensus         5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~   36 (192)
T d1vdca1           5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEG   36 (192)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECC
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEe
Confidence            456777776 44677899999999999888864

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=81.93  E-value=2  Score=21.77  Aligned_cols=31  Identities=19%  Similarity=0.094  Sum_probs=26.2

Q ss_pred             CcEEEEecCCC---hHHHHHHHHHHhCCCEEEEE
Q 034737            6 GLSAFVTGGAS---GIGRALSLALAGKGVFVTVV   36 (85)
Q Consensus         6 ~~~~litG~~~---gig~~~~~~l~~~g~~v~~~   36 (85)
                      .|.+.|.|++.   ..|..+.+.|.+.|+++..+
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v   46 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPV   46 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEE
Confidence            57889999884   59999999999999987666

>d1x9ga_ c.33.1.3 (A:) Ribonuclease MAR1 {Leishmania donovani [TaxId: 5661]}

class: Alpha and beta proteins (a/b)
fold: Isochorismatase-like hydrolases
superfamily: Isochorismatase-like hydrolases
family: Isochorismatase-like hydrolases
domain: Ribonuclease MAR1
species: Leishmania donovani [TaxId: 5661]

Probab=81.87  E-value=2.3  Score=22.64  Aligned_cols=47  Identities=13%  Similarity=-0.086  Sum_probs=34.2

Q ss_pred             cEEEEecCCChHHH-HHHHHHHhCCCEEEEE-----ecCccchHHHHHHHHHH
Q 034737            7 LSAFVTGGASGIGR-ALSLALAGKGVFVTVV-----DLSEEKGNEVAALVEKE   53 (85)
Q Consensus         7 ~~~litG~~~gig~-~~~~~l~~~g~~v~~~-----~~~~~~~~~~~~~l~~~   53 (85)
                      +.++|+|....++- +.+.....+|++|+++     +++++..+...+.+...
T Consensus       100 ~~lii~G~~T~~CV~~Ta~~a~~~Gy~v~vv~Da~~s~~~~~h~~Al~~m~~~  152 (192)
T d1x9ga_         100 DNAVVFGIEGHACILQTVADLLDMNKRVFLPKDGLGSQKKTDFKAAIKLMSSW  152 (192)
T ss_dssp             CEEEEEEECTTTHHHHHHHHHHHTTCEEEEEGGGEECSSHHHHHHHHHHHHTS
T ss_pred             CEEEEEecccCcHHHHHHHHHHHCCCEEEEeCcccCCCCHHHHHHHHHHHHHh
Confidence            57899998777655 8889999999999877     34555555555566543

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.85  E-value=3.1  Score=23.89  Aligned_cols=70  Identities=11%  Similarity=0.100  Sum_probs=42.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHHHhhhc-cC--------------CCCCCceEE
Q 034737            6 GLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKF-HS--------------NLGFPSAMF   68 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~~~~~~-~~--------------~~~~~~~~~   68 (85)
                      -+.++|.|++.|   .+++.+++..  .+|.++..++.-.+-+.+.+....... ++              .....+...
T Consensus        81 pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yDv  157 (290)
T d1xj5a_          81 PKKVLVIGGGDG---GVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA  157 (290)
T ss_dssp             CCEEEEETCSSS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred             CcceEEecCCch---HHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCccE
Confidence            467888887766   3566777653  478999999876666655443211100 00              112335777


Q ss_pred             EEecCCCHHH
Q 034737           69 IRCDVTNTKF   78 (85)
Q Consensus        69 ~~~Dv~~~~~   78 (85)
                      +..|++|+.+
T Consensus       158 Ii~D~~dp~~  167 (290)
T d1xj5a_         158 VIVDSSDPIG  167 (290)
T ss_dssp             EEECCCCTTS
T ss_pred             EEEcCCCCCC
Confidence            8888887543

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=81.67  E-value=2.1  Score=21.65  Aligned_cols=36  Identities=28%  Similarity=0.257  Sum_probs=26.6

Q ss_pred             CcEEEEecCCC-h---------HHHHHHHHHHhCCCEEEEEecCcc
Q 034737            6 GLSAFVTGGAS-G---------IGRALSLALAGKGVFVTVVDLSEE   41 (85)
Q Consensus         6 ~~~~litG~~~-g---------ig~~~~~~l~~~g~~v~~~~~~~~   41 (85)
                      .|.++|.|+.. -         -+.+.++.|.+.|++++++..|++
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPe   49 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPE   49 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTT
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChh
Confidence            56788888653 2         344778889999999999977753

>d1yaca_ c.33.1.3 (A:) YcaC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Isochorismatase-like hydrolases
superfamily: Isochorismatase-like hydrolases
family: Isochorismatase-like hydrolases
domain: YcaC
species: Escherichia coli [TaxId: 562]

Probab=81.65  E-value=1.7  Score=23.55  Aligned_cols=49  Identities=16%  Similarity=0.134  Sum_probs=35.0

Q ss_pred             cEEEEecCCChHHH-HHHHHHHhCCCEEEEE-----ecCccchHHHHHHHHHHhh
Q 034737            7 LSAFVTGGASGIGR-ALSLALAGKGVFVTVV-----DLSEEKGNEVAALVEKENA   55 (85)
Q Consensus         7 ~~~litG~~~gig~-~~~~~l~~~g~~v~~~-----~~~~~~~~~~~~~l~~~~~   55 (85)
                      +.++++|....++- .+++....+|++|+++     +++++..+...+.+...+.
T Consensus       105 ~~lil~G~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~~he~Al~~m~~~g~  159 (204)
T d1yaca_         105 KQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGA  159 (204)
T ss_dssp             SEEEEEEBSCCCCCHHHHHHHHHTTCEEEEETTSCBCSSHHHHHHHHHHHHHHTC
T ss_pred             CEEEEEEeecccHHHHHHHHHHHcCCEEEEeCcccCCCChHHHHHHHHHHHHCCC
Confidence            57899997776664 7788889999998877     3455555666666665543

>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=81.56  E-value=0.94  Score=26.54  Aligned_cols=30  Identities=17%  Similarity=0.160  Sum_probs=23.7

Q ss_pred             EEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737            9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS   39 (85)
Q Consensus         9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~   39 (85)
                      ++|.|+. .=|..+|.+|.+.|.+|+++-+.
T Consensus         5 ~IIVGsG-~aG~v~A~rLae~g~~VlvLEaG   34 (360)
T d1kdga1           5 YIIVGAG-PGGIIAADRLSEAGKKVLLLERG   34 (360)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECcC-HHHHHHHHHHhhCCCeEEEEEcc
Confidence            5777764 44778999999999999998654

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.55  E-value=3.2  Score=23.80  Aligned_cols=70  Identities=11%  Similarity=0.085  Sum_probs=38.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHHHHHHHHHHhhhc-cC-------------CCCCCceEEE
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNEVAALVEKENAKF-HS-------------NLGFPSAMFI   69 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~l~~~~~~~-~~-------------~~~~~~~~~~   69 (85)
                      .+.++|.|++.|   .+++.+++.  ..+|.++..++.-.+-+.+.+....... ++             .....+...+
T Consensus        79 pk~vLiiGgG~G---~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDvI  155 (285)
T d2o07a1          79 PRKVLIIGGGDG---GVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI  155 (285)
T ss_dssp             CCEEEEEECTTS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred             cCeEEEeCCCch---HHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhcCCCCCCEE
Confidence            467888887766   346666664  3478889999876666555443211100 11             0122357777


Q ss_pred             EecCCCHHH
Q 034737           70 RCDVTNTKF   78 (85)
Q Consensus        70 ~~Dv~~~~~   78 (85)
                      .+|++++.+
T Consensus       156 i~D~~~p~~  164 (285)
T d2o07a1         156 ITDSSDPMG  164 (285)
T ss_dssp             EEECC----
T ss_pred             EEcCCCCCC
Confidence            788877654

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=81.51  E-value=1.3  Score=25.27  Aligned_cols=30  Identities=23%  Similarity=0.225  Sum_probs=21.6

Q ss_pred             EEEEecCCCh---HHHHHHHHHHhCCCEEEEEe
Q 034737            8 SAFVTGGASG---IGRALSLALAGKGVFVTVVD   37 (85)
Q Consensus         8 ~~litG~~~g---ig~~~~~~l~~~g~~v~~~~   37 (85)
                      ..+.+++++|   =..++++.|.++|++|+++.
T Consensus         3 il~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~   35 (401)
T d1iira_           3 VLLATCGSRGDTEPLVALAVRVRDLGADVRMCA   35 (401)
T ss_dssp             EEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             EEEECCCChhHHHHHHHHHHHHHHCCCEEEEEe
Confidence            4445456544   34478999999999998776

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=81.20  E-value=3.5  Score=23.94  Aligned_cols=43  Identities=16%  Similarity=0.142  Sum_probs=29.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHHHHHHHH
Q 034737            6 GLSAFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNEVAALVE   51 (85)
Q Consensus         6 ~~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~l~   51 (85)
                      .|.+++.|++.|   .+++.+++.  ..+|.++..++.-.+-+.+.+.
T Consensus        78 pk~VLiiG~G~G---~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~  122 (312)
T d1uira_          78 PKRVLIVGGGEG---ATLREVLKHPTVEKAVMVDIDGELVEVAKRHMP  122 (312)
T ss_dssp             CCEEEEEECTTS---HHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCH
T ss_pred             cceEEEeCCCch---HHHHHHHhcCCcceEEEecCCHHHHHHHHhcCc
Confidence            467888887766   345555544  3589999999876666655543

>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: MrsD
species: Bacillus sp. hil-y85/54728 [TaxId: 69002]

Probab=80.78  E-value=0.84  Score=24.72  Aligned_cols=36  Identities=14%  Similarity=0.040  Sum_probs=21.1

Q ss_pred             CCCCCCcEEEEecCCChHH----HHHHHHHHhCCCEEEEEe
Q 034737            1 MELKPGLSAFVTGGASGIG----RALSLALAGKGVFVTVVD   37 (85)
Q Consensus         1 ~~l~~~~~~litG~~~gig----~~~~~~l~~~g~~v~~~~   37 (85)
                      |++..||.++ .|.+|+|+    ..+++.|.+.|++|.++-
T Consensus         1 ms~l~~KkIl-lgvTGsiaa~k~~~l~~~L~~~g~eV~vv~   40 (183)
T d1p3y1_           1 ISILKDKKLL-IGICGSISSVGISSYLLYFKSFFKEIRVVM   40 (183)
T ss_dssp             CTTGGGCEEE-EEECSCGGGGGTHHHHHHHTTTSSEEEEEE
T ss_pred             CCCcCCCEEE-EEEeCHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence            5553267644 33444433    366777888898876654

>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Archaeon Methanococcus voltae [TaxId: 2188]

Probab=80.33  E-value=1.6  Score=22.24  Aligned_cols=31  Identities=23%  Similarity=0.139  Sum_probs=22.0

Q ss_pred             CcEEEEecCCC----hHHHHHHHHHHhCCCEEEEE
Q 034737            6 GLSAFVTGGAS----GIGRALSLALAGKGVFVTVV   36 (85)
Q Consensus         6 ~~~~litG~~~----gig~~~~~~l~~~g~~v~~~   36 (85)
                      +|.++|+|..|    -+...++++|...+.++...
T Consensus         1 ~kiI~i~G~~GsGKsT~~~~L~~~l~~~~~~~~~~   35 (190)
T d1khta_           1 NKVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMV   35 (190)
T ss_dssp             CCEEEEECCTTSCHHHHHHHHHHHHHTTTCCCEEE
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            57899999654    26667777777778776554