Citrus Sinensis ID: 035170

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-
Protein Sequence
MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE
Secondary Structure (PSIPRED)
ccEEEccEEEEEEcccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
HHHHcccEEEEccHHHccHHHHHHHHHHHHHccccccHHHEEEEEEHHHcHHHHHHHHHccccEEEEEccc
Coil and Loop (DISEMBL)
mnllnertlkgtffgnykprsdlpSVVEKYMSKELEVEKFithtvpfseINKAFEYMLRGEGLRCIIRMEE
Flexible Loop (DISEMBL)
mnllnertlkgtffgnykprsdlPSVVEKYMSKELEVEKfithtvpfseinkAFEYMLRGEGLRCIIRMEE
Low Complexity Region (SEG)
MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE
Disordered region (IsUnstruct)
**********GTFFGNYK****LPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIR***
Disordered Region (DISOPRED)
MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRME*
Disordered Region (DISEMBL)
MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE
Disordered Region (DISPRO)
MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	71	2.2.26 [Sep-21-2011]
P14673	380	Alcohol dehydrogenase 1 O	N/A	no	1.0	0.186	0.859	6e-33
P14675	380	Alcohol dehydrogenase 3 O	N/A	no	1.0	0.186	0.845	2e-32
P14674	380	Alcohol dehydrogenase 2 O	N/A	no	1.0	0.186	0.845	2e-32
P17648	380	Alcohol dehydrogenase OS=	N/A	no	1.0	0.186	0.830	3e-32
P12886	380	Alcohol dehydrogenase 1 O	N/A	no	1.0	0.186	0.830	4e-32
P13603	380	Alcohol dehydrogenase 1 O	N/A	no	1.0	0.186	0.802	9e-32
P25141	382	Alcohol dehydrogenase 1 O	N/A	no	0.985	0.183	0.828	2e-31
P48977	380	Alcohol dehydrogenase OS=	N/A	no	1.0	0.186	0.873	2e-31
P06525	379	Alcohol dehydrogenase cla	yes	no	0.971	0.182	0.826	4e-31
P00333	379	Alcohol dehydrogenase 1 O	N/A	no	0.985	0.184	0.828	6e-31

>sp|P14673|ADH1_SOLTU Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1

 Score =  139 bits (349), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 61/71 (85%), Positives = 69/71 (97%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           MNLLNERTLKGTFFGNYKPRSD+PSVVEKYM+KELE+EKFITHT+PF+EINKAF+ ML+G
Sbjct: 310 MNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKG 369

Query: 61  EGLRCIIRMEE 71
           EGLRCII ME+
Sbjct: 370 EGLRCIITMED 380

Solanum tuberosum (taxid: 4113)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|P14675|ADH3_SOLTU Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1

 Score =  137 bits (345), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/71 (84%), Positives = 68/71 (95%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           MN LNERTLKGTFFGNYKPRSD+PSVVEKYM+KELE+EKFITHT+PF+EINKAF+ ML+G
Sbjct: 310 MNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKG 369

Query: 61  EGLRCIIRMEE 71
           EGLRCII ME+
Sbjct: 370 EGLRCIITMED 380

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14674|ADH2_SOLTU Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1

 Score =  137 bits (345), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/71 (84%), Positives = 68/71 (95%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           MN LNERTLKGTFFGNYKPRSD+PSVVEKYM+KELE+EKFITHT+PF+EINKAF+ ML+G
Sbjct: 310 MNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKG 369

Query: 61  EGLRCIIRMEE 71
           EGLRCII ME+
Sbjct: 370 EGLRCIITMED 380

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P17648|ADH_FRAAN Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2

 Score =  137 bits (344), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 59/71 (83%), Positives = 68/71 (95%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           MN LNERTLKGTFFGNYKPR+D+PSVVEKYM+KELEV+KFITH +PFS+INKAF+YML+G
Sbjct: 310 MNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITHQLPFSQINKAFDYMLKG 369

Query: 61  EGLRCIIRMEE 71
           EG+RCII MEE
Sbjct: 370 EGIRCIITMEE 380

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Fragaria ananassa (taxid: 3747)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P12886|ADH1_PEA Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1

 Score =  136 bits (343), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 59/71 (83%), Positives = 67/71 (94%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           MN LNERTLKGTF+GNYKPR+DLP+VVEKYM  ELE+EKFITHTVPFSEINKAF+YML+G
Sbjct: 310 MNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYMLKG 369

Query: 61  EGLRCIIRMEE 71
           E +RCII+MEE
Sbjct: 370 ESIRCIIKMEE 380

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P13603|ADH1_TRIRP Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1

 Score =  135 bits (339), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 57/71 (80%), Positives = 67/71 (94%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           MN LNERTLKGTF+GNYKPR+DLP+VVE+YM  ELE+EKFITH++PFSEINKAF+YML+G
Sbjct: 310 MNFLNERTLKGTFYGNYKPRTDLPNVVEQYMKGELELEKFITHSIPFSEINKAFDYMLKG 369

Query: 61  EGLRCIIRMEE 71
           E +RCIIRMEE
Sbjct: 370 ESIRCIIRMEE 380

Trifolium repens (taxid: 3899)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P25141|ADH1_PETHY Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1

 Score =  134 bits (337), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/70 (82%), Positives = 66/70 (94%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           MNLLNERTLKGTFFGNYKP+SD+PSVV+KYM KELE+EKFITH VPFSEINKAF+YML+G
Sbjct: 312 MNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEINKAFDYMLKG 371

Query: 61  EGLRCIIRME 70
           E +RC+I ME
Sbjct: 372 ESIRCMITME 381

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P48977|ADH_MALDO Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1

 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 62/71 (87%), Positives = 68/71 (95%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           +N LNERTLKGTFFGNYK R+D+PSVVEKYM+KELE+EKFITH VPFSEINKAFEYML+G
Sbjct: 310 VNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITHKVPFSEINKAFEYMLKG 369

Query: 61  EGLRCIIRMEE 71
           EGLRCIIRMEE
Sbjct: 370 EGLRCIIRMEE 380

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P06525|ADH1_ARATH Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2

 Score =  133 bits (334), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 57/69 (82%), Positives = 65/69 (94%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           MN LNERTLKGTFFGNYKP++D+P VVEKYM+KELE+EKFITHTVPFSEINKAF+YML+G
Sbjct: 309 MNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDYMLKG 368

Query: 61  EGLRCIIRM 69
           E +RCII M
Sbjct: 369 ESIRCIITM 377

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P00333|ADH1_MAIZE Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1

 Score =  132 bits (332), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 58/70 (82%), Positives = 65/70 (92%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           MN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPF+EINKAF+ M +G
Sbjct: 309 MNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLMAKG 368

Query: 61  EGLRCIIRME 70
           EG+RCIIRME
Sbjct: 369 EGIRCIIRME 378

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	71
68138959	380	alcohol dehydrogenase [Citrus x paradisi	1.0	0.186	1.0	1e-35
224066747	380	predicted protein [Populus trichocarpa]	0.985	0.184	0.9	5e-33
255587152	380	alcohol dehydrogenase, putative [Ricinus	1.0	0.186	0.943	1e-32
9885272	380	alcohol dehydrogenase 1 [Vitis vinifera]	0.985	0.184	0.9	2e-32
295148815	380	alcohol dehydrogenase I [Vitis aestivali	0.985	0.184	0.9	2e-32
225431503	380	PREDICTED: alcohol dehydrogenase 1 [Viti	0.985	0.184	0.9	3e-32
295148819	380	alcohol dehydrogenase I [Vitis cinerea]	0.985	0.184	0.9	3e-32
295148817	380	alcohol dehydrogenase I [Vitis californi	0.985	0.184	0.9	3e-32
225457787	380	PREDICTED: alcohol dehydrogenase 1 [Viti	0.985	0.184	0.9	3e-32
147838940	380	hypothetical protein VITISV_043875 [Viti	0.985	0.184	0.9	4e-32

>gi|68138959|gb|AAY86033.1| alcohol dehydrogenase [Citrus x paradisi]

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 71/71 (100%), Positives = 71/71 (100%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG
Sbjct: 310 MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 369

Query: 61  EGLRCIIRMEE 71
           EGLRCIIRMEE
Sbjct: 370 EGLRCIIRMEE 380

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066747|ref|XP_002302195.1| predicted protein [Populus trichocarpa] gi|118486976|gb|ABK95320.1| unknown [Populus trichocarpa] gi|222843921|gb|EEE81468.1| predicted protein [Populus trichocarpa]

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 63/70 (90%), Positives = 69/70 (98%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           MNLLNERTLKGTFFGNYKPR+DLP VVEKYM+KELEVEKFITH++PFSEINKAF+YML+G
Sbjct: 310 MNLLNERTLKGTFFGNYKPRTDLPGVVEKYMNKELEVEKFITHSIPFSEINKAFDYMLKG 369

Query: 61  EGLRCIIRME 70
           EGLRCIIRME
Sbjct: 370 EGLRCIIRME 379

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587152|ref|XP_002534157.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223525768|gb|EEF28223.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/71 (94%), Positives = 71/71 (100%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           +NLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELE+EKFITH+VPFSEINKAFEYML+G
Sbjct: 310 VNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELELEKFITHSVPFSEINKAFEYMLKG 369

Query: 61  EGLRCIIRMEE 71
           EGLRCIIRMEE
Sbjct: 370 EGLRCIIRMEE 380

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9885272|gb|AAG01381.1|AF194173_1 alcohol dehydrogenase 1 [Vitis vinifera] gi|1840425|gb|AAB65840.1| alcohol dehydrogenase [Vitis vinifera]

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/70 (90%), Positives = 69/70 (98%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           +NLLNERTLKGTFFGNYKPRSD+P+VVEKYM+KELEVEKFITH+VPFSEINKAFEYML+G
Sbjct: 310 INLLNERTLKGTFFGNYKPRSDIPAVVEKYMNKELEVEKFITHSVPFSEINKAFEYMLKG 369

Query: 61  EGLRCIIRME 70
           EGLRCII ME
Sbjct: 370 EGLRCIIHME 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|295148815|gb|ADF80905.1| alcohol dehydrogenase I [Vitis aestivalis]

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/70 (90%), Positives = 69/70 (98%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           +NLLNERTLKGTFFGNYKPRSD+P+VVEKYM+KELEVEKFITH+VPFSEINKAFEYML+G
Sbjct: 310 INLLNERTLKGTFFGNYKPRSDIPAVVEKYMNKELEVEKFITHSVPFSEINKAFEYMLKG 369

Query: 61  EGLRCIIRME 70
           EGLRCII ME
Sbjct: 370 EGLRCIIHME 379

Source: Vitis aestivalis

Species: Vitis aestivalis

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431503|ref|XP_002281363.1| PREDICTED: alcohol dehydrogenase 1 [Vitis vinifera]

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/70 (90%), Positives = 69/70 (98%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           +NLLNERTLKGTFFGNYKPRSDLPSVVEKYM+KELEVEKFITH VPF+EINKAFEYML+G
Sbjct: 310 VNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHEVPFAEINKAFEYMLQG 369

Query: 61  EGLRCIIRME 70
           +GLRCIIRM+
Sbjct: 370 DGLRCIIRMD 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|295148819|gb|ADF80907.1| alcohol dehydrogenase I [Vitis cinerea]

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/70 (90%), Positives = 68/70 (97%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           +NLLNERTLKGTFFGNYKPRSD+P+VVEKYM+KELEVEKFITH+VPFSEINKAFEYML G
Sbjct: 310 INLLNERTLKGTFFGNYKPRSDIPAVVEKYMNKELEVEKFITHSVPFSEINKAFEYMLNG 369

Query: 61  EGLRCIIRME 70
           EGLRCII ME
Sbjct: 370 EGLRCIIHME 379

Source: Vitis cinerea

Species: Vitis cinerea

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|295148817|gb|ADF80906.1| alcohol dehydrogenase I [Vitis californica]

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/70 (90%), Positives = 68/70 (97%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           +NLLNERTLKGTFFGNYKPRSD+P+VVEKYM+KELEVEKFITH+VPFSEINKAFEYML G
Sbjct: 310 INLLNERTLKGTFFGNYKPRSDIPAVVEKYMNKELEVEKFITHSVPFSEINKAFEYMLNG 369

Query: 61  EGLRCIIRME 70
           EGLRCII ME
Sbjct: 370 EGLRCIIHME 379

Source: Vitis californica

Species: Vitis californica

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457787|ref|XP_002265158.1| PREDICTED: alcohol dehydrogenase 1 [Vitis vinifera] gi|302142758|emb|CBI19961.3| unnamed protein product [Vitis vinifera]

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/70 (90%), Positives = 68/70 (97%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           +NLLNERTLKGTFFGNYKPRSD+P+VVEKYM+KELEVEKFITH+VPFSEINKAFEYML G
Sbjct: 310 INLLNERTLKGTFFGNYKPRSDIPAVVEKYMNKELEVEKFITHSVPFSEINKAFEYMLNG 369

Query: 61  EGLRCIIRME 70
           EGLRCII ME
Sbjct: 370 EGLRCIIHME 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838940|emb|CAN68099.1| hypothetical protein VITISV_043875 [Vitis vinifera]

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/70 (90%), Positives = 68/70 (97%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           +NLLNERTLKGTFFGNYKPRSD+P+VVEKYM+KELEVEKFITH+VPFSEINKAFEYML G
Sbjct: 310 INLLNERTLKGTFFGNYKPRSDIPAVVEKYMNKELEVEKFITHSVPFSEINKAFEYMLNG 369

Query: 61  EGLRCIIRME 70
           EGLRCII ME
Sbjct: 370 EGLRCIIHME 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	71
TAIR|locus:2025237	379	ADH1 "alcohol dehydrogenase 1"	0.971	0.182	0.826	2.4e-28
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.929	0.173	0.545	1.2e-16
TAIR|locus:2009512	386	AT1G22440 [Arabidopsis thalian	0.985	0.181	0.485	5.7e-14
TAIR|locus:2120663	389	AT4G22110 [Arabidopsis thalian	0.985	0.179	0.457	2.7e-13
UNIPROTKB|F1S0C1	374	ADH5 "Uncharacterized protein"	0.943	0.179	0.447	8.6e-13
UNIPROTKB|Q3ZC42	374	ADH5 "Alcohol dehydrogenase cl	0.943	0.179	0.417	2.4e-12
UNIPROTKB|P11766	374	ADH5 "Alcohol dehydrogenase cl	0.943	0.179	0.447	2.4e-12
DICTYBASE|DDB_G0281865	379	adh5 "alcohol dehydrogenase, c	0.943	0.176	0.447	3.2e-12
TAIR|locus:2009522	388	AT1G22430 [Arabidopsis thalian	0.985	0.180	0.442	5.6e-12
ZFIN|ZDB-GENE-011003-1	376	adh5 "alcohol dehydrogenase 5"	0.929	0.175	0.439	6.6e-12

TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 57/69 (82%), Positives = 65/69 (94%)

Query:     1 MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
             MN LNERTLKGTFFGNYKP++D+P VVEKYM+KELE+EKFITHTVPFSEINKAF+YML+G
Sbjct:   309 MNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDYMLKG 368

Query:    61 EGLRCIIRM 69
             E +RCII M
Sbjct:   369 ESIRCIITM 377

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045333 "cellular respiration" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;RCA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS;IMP

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 36/66 (54%), Positives = 53/66 (80%)

Query:     4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGL 63
             L+ ++LKGT FG +KP+SDLPS+++KYM+KE+ +++FITH + F EINKAF  M  G+ L
Sbjct:   314 LSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLMREGKCL 373

Query:    64 RCIIRM 69
             RC++ M
Sbjct:   374 RCVLHM 379

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

TAIR|locus:2009512 AT1G22440 [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 5.7e-14, P = 5.7e-14
 Identities = 34/70 (48%), Positives = 48/70 (68%)

Query:     2 NLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE 61
             +LL  RT+ GT FG  KP+ D+P +V++Y+ KEL +E  ITH + F EINKAF  +  G 
Sbjct:   317 DLLRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFEEINKAFHLLAEGN 376

Query:    62 GLRCIIRMEE 71
              +RCII M++
Sbjct:   377 SIRCIIWMDK 386

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010359 "regulation of anion channel activity" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2120663 AT4G22110 [Arabidopsis thaliana (taxid:3702)]

 Score = 180 (68.4 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 32/70 (45%), Positives = 50/70 (71%)

Query:     2 NLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE 61
             +LL  R + G+ FG  KP+ D+P +V+ Y+ KEL ++ FITH + F EINKAF+ +++G+
Sbjct:   320 DLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEEINKAFDLLVQGK 379

Query:    62 GLRCIIRMEE 71
              LRCI+ M +
Sbjct:   380 SLRCILWMNK 389

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

UNIPROTKB|F1S0C1 ADH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 175 (66.7 bits), Expect = 8.6e-13, P = 8.6e-13
 Identities = 30/67 (44%), Positives = 49/67 (73%)

Query:     3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
             L+  RT KGT FG +K    +P +V +YMSK+++V++F+TH +PF +IN+AFE M  G+ 
Sbjct:   308 LVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELMHAGKS 367

Query:    63 LRCIIRM 69
             +R +I++
Sbjct:   368 IRTVIKL 374

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q3ZC42 ADH5 "Alcohol dehydrogenase class-3" [Bos taurus (taxid:9913)]

 Score = 171 (65.3 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 28/67 (41%), Positives = 50/67 (74%)

Query:     3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
             L+  RT KGT FG +K    +P +V +YMSK+++V++F+TH++PF +IN+AF+ M  G+ 
Sbjct:   308 LVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHSLPFDQINEAFDLMHAGKS 367

Query:    63 LRCIIRM 69
             +R ++++
Sbjct:   368 IRTVVKL 374

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|P11766 ADH5 "Alcohol dehydrogenase class-3" [Homo sapiens (taxid:9606)]

 Score = 171 (65.3 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 30/67 (44%), Positives = 48/67 (71%)

Query:     3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
             L+  RT KGT FG +K    +P +V +YMSK+++V++F+TH + F EINKAFE M  G+ 
Sbjct:   308 LVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS 367

Query:    63 LRCIIRM 69
             +R ++++
Sbjct:   368 IRTVVKI 374

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009055 "electron carrier activity" evidence=TAS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0005504 "fatty acid binding" evidence=IDA

GO:0051775 "response to redox state" evidence=IDA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IDA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=TAS

DICTYBASE|DDB_G0281865 adh5 "alcohol dehydrogenase, class 3" [Dictyostelium discoideum (taxid:44689)]

 Score = 170 (64.9 bits), Expect = 3.2e-12, P = 3.2e-12
 Identities = 30/67 (44%), Positives = 47/67 (70%)

Query:     3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
             L+  R  KG+ FG  K RS LPS+++KYM K+L+V++++T T P +EIN AF+ M  G+ 
Sbjct:   313 LVTGRVWKGSAFGGVKSRSQLPSIIDKYMDKKLKVDEYVTFTYPLNEINTAFDVMHEGKS 372

Query:    63 LRCIIRM 69
             LR ++ +
Sbjct:   373 LRSVVNL 379

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

TAIR|locus:2009522 AT1G22430 [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 5.6e-12, P = 5.6e-12
 Identities = 31/70 (44%), Positives = 47/70 (67%)

Query:     2 NLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE 61
             +LL  R + G+ FG  K + D+P +V+ Y+ KEL ++ FITH + F EINKAF  +  G+
Sbjct:   319 DLLRGRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSFITHELNFKEINKAFALLEEGK 378

Query:    62 GLRCIIRMEE 71
              LRCI+ M++
Sbjct:   379 SLRCILWMDK 388

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)]

 Score = 167 (63.8 bits), Expect = 6.6e-12, P = 6.6e-12
 Identities = 29/66 (43%), Positives = 48/66 (72%)

Query:     3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
             L+  RT KGT FG +K    +P +V  YM+K+L V++F+THT+PF++IN+AF+ M  G+ 
Sbjct:   310 LVTGRTWKGTAFGGWKSVESVPKLVNDYMNKKLMVDEFVTHTLPFAQINEAFDLMHAGKS 369

Query:    63 LRCIIR 68
             +R +++
Sbjct:   370 IRAVLQ 375

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2R8Z5	ADH1_ORYSJ	1, ., 1, ., 1, ., 1	0.8285	0.9859	0.1846	yes	no
P06525	ADH1_ARATH	1, ., 1, ., 1, ., 1	0.8260	0.9718	0.1820	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	Adh1	SubName- Full=Putative uncharacterized protein; (381 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XI.3391.1	pyruvate decarboxylase (EC-4.1.1.1) (574 aa)						•			0.899
	gw1.V.2645.1	hypothetical protein (479 aa)						•			0.899
	gw1.III.2325.1	SubName- Full=Putative uncharacterized protein; (514 aa)						•			0.899
	gw1.4555.2.1	annotation not avaliable (88 aa)						•			0.899
	gw1.134.62.1	hypothetical protein (453 aa)						•			0.899
	grail3.0005008802	aldehyde dehydrogenase (NAD+) (EC-1.2.1.3) (543 aa)						•			0.899
	fgenesh4_pg.C_LG_II000742	hypothetical protein (480 aa)						•			0.899
	eugene3.01840014	pyruvate decarboxylase (549 aa)						•			0.899
	eugene3.00060891	pyruvate decarboxylase (EC-4.1.1.1) (606 aa)						•			0.899
	estExt_fgenesh4_pm.C_LG_XVI0442	pyruvate decarboxylase (EC-4.1.1.1) (606 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	71
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	8e-43
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-29
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-28
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	6e-26
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	2e-22
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	2e-21
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	3e-19
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	4e-19
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	5e-19
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-15
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	4e-14
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	4e-13
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	4e-09
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	5e-08
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	7e-08
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	3e-07
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	1e-06
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	2e-05
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	4e-05
cd05281	341	cd05281, TDH, Threonine dehydrogenase	8e-05
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	9e-05
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	1e-04
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	3e-04
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	3e-04
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	7e-04
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	9e-04
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	0.001
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	0.003
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	0.003

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  141 bits (357), Expect = 8e-43
 Identities = 50/68 (73%), Positives = 60/68 (88%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           MNLLN RTLKGT FG YKP++DLP++VEKYM KELE+EKFITH +PFSEINKAF+ +L+G
Sbjct: 302 MNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKG 361

Query: 61  EGLRCIIR 68
           E LRCI+ 
Sbjct: 362 ECLRCILH 369

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  106 bits (267), Expect = 1e-29
 Identities = 33/68 (48%), Positives = 48/68 (70%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
             L+  RT KG+FFG +K RSD+P +V KYM+K+ ++++ ITH +PF EINK F+ M  G
Sbjct: 298 FQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSG 357

Query: 61  EGLRCIIR 68
           E +R +I 
Sbjct: 358 ECIRTVIT 365

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  103 bits (259), Expect = 1e-28
 Identities = 40/67 (59%), Positives = 54/67 (80%)

Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
            L+ RTLKG+ FG +KP+SDLPS+V+KYM+KE+ +++FITH + F EINKAFE M  G+ 
Sbjct: 310 FLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC 369

Query: 63  LRCIIRM 69
           LRC+I M
Sbjct: 370 LRCVIHM 376

Length = 378

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 96.5 bits (241), Expect = 6e-26
 Identities = 30/67 (44%), Positives = 47/67 (70%)

Query: 2   NLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE 61
            L+  R  KGT FG +K RS +P +VE YM  +++V++FITHT+P  EIN+AF+ M  G+
Sbjct: 302 QLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGK 361

Query: 62  GLRCIIR 68
            +R +++
Sbjct: 362 SIRTVVK 368

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 87.3 bits (217), Expect = 2e-22
 Identities = 28/67 (41%), Positives = 47/67 (70%)

Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           L+  R  KG+ FG  +PRSD+P +V+ YM+ +L +++ +THT+P  +IN+AF+ M  G+ 
Sbjct: 300 LVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKS 359

Query: 63  LRCIIRM 69
           +R +IR 
Sbjct: 360 IRSVIRF 366

Length = 366

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 84.4 bits (209), Expect = 2e-21
 Identities = 28/68 (41%), Positives = 42/68 (61%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
            +LL  RT+KGT FG +K +  +P +V  Y  K+  +++ ITH +PF EIN  F+ M  G
Sbjct: 298 NDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSG 357

Query: 61  EGLRCIIR 68
           E +R I+ 
Sbjct: 358 ESIRTILT 365

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 78.5 bits (194), Expect = 3e-19
 Identities = 26/67 (38%), Positives = 43/67 (64%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL  RT KG  FG +K +  +P +V  YM+K+  ++  ITHT+PF +IN+ F+ +  G
Sbjct: 305 MLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSG 364

Query: 61  EGLRCII 67
           + +R ++
Sbjct: 365 KSIRTVL 371

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 78.3 bits (193), Expect = 4e-19
 Identities = 27/67 (40%), Positives = 45/67 (67%)

Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           L+  R  +G+ FG  K R++LP +VE+YM  E+ ++ F+THT+P  +IN+AF+ M  G+ 
Sbjct: 302 LVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS 361

Query: 63  LRCIIRM 69
           +R +I  
Sbjct: 362 IRTVIHY 368

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score = 78.3 bits (193), Expect = 5e-19
 Identities = 25/69 (36%), Positives = 48/69 (69%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M L + R++ G+ FG++K +S LP++ ++ M   + ++ FITH +PF +IN+AF+ +  G
Sbjct: 313 MELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDG 372

Query: 61  EGLRCIIRM 69
           + LRC++ +
Sbjct: 373 KALRCLLHL 381

Length = 381

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 68.7 bits (169), Expect = 1e-15
 Identities = 23/66 (34%), Positives = 41/66 (62%)

Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
            L+E+ L+G+ +G+  PR D+P +++ Y +  L++++ +T      EIN+AF  ML GE 
Sbjct: 298 FLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGEN 357

Query: 63  LRCIIR 68
            R +I 
Sbjct: 358 ARGVIV 363

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 64.3 bits (157), Expect = 4e-14
 Identities = 27/63 (42%), Positives = 41/63 (65%)

Query: 6   ERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRC 65
           ERTLKG++ G+  PR D+P  +  Y+S  L V+K +TH +P  EIN+ F+ +  GE +R 
Sbjct: 309 ERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQ 368

Query: 66  IIR 68
           +I 
Sbjct: 369 VIL 371

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 61.6 bits (150), Expect = 4e-13
 Identities = 23/65 (35%), Positives = 43/65 (66%)

Query: 4   LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGL 63
           L ++ L+GT FG   PR+D+P ++E Y + +L++++ IT T    +IN+ ++ ML G+ +
Sbjct: 304 LLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRTYTLDQINEGYQDMLDGKNI 363

Query: 64  RCIIR 68
           R +I 
Sbjct: 364 RGVIV 368

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 50.2 bits (120), Expect = 4e-09
 Identities = 17/59 (28%), Positives = 35/59 (59%)

Query: 9   LKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCII 67
           LK +++G+  P  D P +V+ Y+   L ++ F+T  +   ++ +AF+ M  G+ LR ++
Sbjct: 298 LKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVV 356

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 47.2 bits (113), Expect = 5e-08
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 3   LLNERTLKGTFFGNYK--PRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           L  E T++G++       P  +  + ++   S +++VE  ITH +P  +   AFE +   
Sbjct: 275 LRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADR 334

Query: 61  E 61
           E
Sbjct: 335 E 335

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 46.8 bits (112), Expect = 7e-08
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)

Query: 1   MNLL--NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYML 58
            NL+   E T+ G++        D    +E   S +++V+  ITH  P  +I +AFE   
Sbjct: 277 PNLIHYREITITGSY---AASPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAA 333

Query: 59  RGEGLRCII 67
            G+ L+ +I
Sbjct: 334 DGKSLKIVI 342

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 45.1 bits (107), Expect = 3e-07
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 7   RTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRC 65
             + G++    +PR DLP +V    S +L+ E  +TH     EIN+A+E + +G    R 
Sbjct: 307 IKIIGSY--GARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRA 364

Query: 66  IIR 68
           I+ 
Sbjct: 365 IVE 367

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 1   MNLLNE-RTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLR 59
            +LL   +T++G   G+  P+  +P ++E Y   +   +K +T   PF +IN+A      
Sbjct: 298 NDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVT-FYPFEDINQAIADSES 356

Query: 60  GEGLRCIIR 68
           G+ ++ ++R
Sbjct: 357 GKVIKPVLR 365

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 8/67 (11%)

Query: 4   LNERTLKGTF-FGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG-- 60
           L E  ++G F + N       P+ +E   S +++V+  ITH  P  +  +AFE   +G  
Sbjct: 280 LREIDIRGVFRYAN-----TYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKK 334

Query: 61  EGLRCII 67
             ++ +I
Sbjct: 335 GVIKVVI 341

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 38.9 bits (91), Expect = 4e-05
 Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE 61
           +  E TL+G+   + +   D    ++   S +++ EK ITH +P  +  +A+E     +
Sbjct: 284 VSKELTLRGSLRPSGRE--DFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRK 340

Length = 350

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 38.0 bits (89), Expect = 8e-05
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 32  SKELEVEKFITHTVPFSEINKAFEYMLRGE 61
           S ++++   ITH +P  +  +AFE M  G+
Sbjct: 304 SGKVDLSPVITHKLPLEDFEEAFELMRSGK 333

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 38.0 bits (89), Expect = 9e-05
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           +L E ++ G+  G    R+DL   ++   + E +++  I  T+P  EIN+A+E M +G+ 
Sbjct: 275 ILKEISIVGSLVGT---RADLEEALD--FAAEGKIKPEILETIPLDEINEAYERMEKGKV 329

Query: 63  L-RCIIRM 69
             R +I M
Sbjct: 330 RGRAVIDM 337

Length = 339

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 5/63 (7%)

Query: 8   TLKGTFFGNYKPR--SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRC 65
           T+ G    NY P         +E+         + +TH  P  +IN+A E    G  L+ 
Sbjct: 301 TIIGVH--NYDPSHLYRAVRFLERT-QDRFPFAELVTHRYPLEDINEALELAESGTALKV 357

Query: 66  IIR 68
           +I 
Sbjct: 358 VID 360

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 6/64 (9%)

Query: 6   ERTLKGTFFGNYK-PRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLR 64
           E T+ G+F   Y  PR+     +    S +++V+  ++H +P  E+ +A E M  G  L+
Sbjct: 276 ELTIIGSFINPYTFPRA-----IALLESGKIDVKGLVSHRLPLEEVPEALEGMRSGGALK 330

Query: 65  CIIR 68
            ++ 
Sbjct: 331 VVVV 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 36.5 bits (85), Expect = 3e-04
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 12  TF-FGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM 69
           T  FG    RS  P ++    S  L++E  I H +P  E  +A+    + + L+ ++  
Sbjct: 286 TLRFGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLDP 344

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 35.4 bits (82), Expect = 7e-04
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 1/54 (1%)

Query: 8   TLKGTFFGNYKP-RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
            L      + +     +   V+      L++   +TH  P  E+  AFE   R 
Sbjct: 249 DLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRR 302

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 35.2 bits (82), Expect = 9e-04
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 20  RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           R D P V++   S +++ E  ITH  PF ++ +AF+      G
Sbjct: 286 REDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPG 328

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 34.9 bits (81), Expect = 0.001
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 22  DLPSVVEKYMSKELEVEKFITHTVPFSEINKAFE 55
             P +++   S +L+  K +TH    SEI KA++
Sbjct: 295 TTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYD 328

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 33.4 bits (77), Expect = 0.003
 Identities = 12/63 (19%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 5   NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLR 64
            +RTL G+++ +     +    + ++   +LEV++ +TH     +  +A+    +GE  +
Sbjct: 278 KQRTLIGSWYFSVPDMEECAEFLARH---KLEVDRLVTHRFGLDQAPEAYALFAQGESGK 334

Query: 65  CII 67
            + 
Sbjct: 335 VVF 337

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 33.4 bits (77), Expect = 0.003
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 8/64 (12%)

Query: 1   MNLLNER--TLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYML 58
           ++ L  R   + G+F G      DLP V++     +L        T P  EI +  E + 
Sbjct: 273 LSDLIARELRIIGSFGG---TPEDLPEVLDLIAKGKL---DPQVETRPLDEIPEVLERLH 326

Query: 59  RGEG 62
           +G+ 
Sbjct: 327 KGKV 330

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	71
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	99.69
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	99.49
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	99.47
PLN02827	378	Alcohol dehydrogenase-like	99.33
PLN02740	381	Alcohol dehydrogenase-like	99.25
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	99.25
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	99.21
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	99.21
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	99.19
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	99.19
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	99.17
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	99.17
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	99.17
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	99.15
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	99.15
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	99.15
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	99.13
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	99.11
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	99.03
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	98.93
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	98.87
PLN02178	375	cinnamyl-alcohol dehydrogenase	98.87
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	98.85
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	98.81
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	98.81
PLN02514	357	cinnamyl-alcohol dehydrogenase	98.81
PLN02586	360	probable cinnamyl alcohol dehydrogenase	98.77
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	98.76
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	98.75
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	98.73
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	98.6
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	98.57
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	98.52
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	98.48
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	98.39
PRK10083	339	putative oxidoreductase; Provisional	98.39
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	98.33
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	98.33
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	98.26
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	98.2
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	98.17
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	98.15
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	98.12
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	98.11
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	98.09
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	98.06
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	98.04
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	98.03
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	98.03
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	98.01
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	98.01
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	98.0
PLN02702	364	L-idonate 5-dehydrogenase	97.98
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	97.97
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	97.94
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	97.94
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	97.93
PRK13771	334	putative alcohol dehydrogenase; Provisional	97.9
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	97.89
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.88
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	97.83
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	97.82
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	97.81
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	97.74
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.74
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	97.7
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	97.66
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	97.66
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	97.65
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	97.62
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.62
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	97.59
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.57
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	97.56
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	97.53
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	97.48
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.47
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	97.45
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	97.42
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	97.4
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	97.39
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	97.38
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.37
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	97.36
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	97.33
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	97.33
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	97.31
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	97.12
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	97.1
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	97.1
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.08
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	97.01
PTZ00354	334	alcohol dehydrogenase; Provisional	96.99
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	96.95
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.92
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	96.89
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.71
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	96.71
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	96.63
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	96.62
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.55
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	96.4
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	96.38
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.37
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	96.34
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	96.32
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.3
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	96.23
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	96.2
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.19
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	96.13
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	96.12
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.95
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	95.91
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	95.86
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	95.84
cd08252	336	AL_MDR Arginate lyase and other MDR family members	95.81
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	95.71
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	95.64
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	95.43
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	95.38
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	95.07
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	95.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	94.9
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	94.39
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	91.39
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	90.69
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	90.67
PF07109	97	Mg-por_mtran_C: Magnesium-protoporphyrin IX methyl	85.27

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=99.69  E-value=4.6e-17  Score=98.23  Aligned_cols=68  Identities=41%  Similarity=0.871  Sum_probs=63.2

Q ss_pred             CcccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            2 NLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         2 ~~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      .|..+.+|+||++|+..|+.+++++++++.+|+++++++|||+++|+|+++||+.+.+|+.+|.||.+
T Consensus       299 ~lv~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~  366 (366)
T COG1062         299 QLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF  366 (366)
T ss_pred             HeeccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence            35567899999999888889999999999999999999999999999999999999999999998864

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.49  E-value=8.7e-14  Score=83.79  Aligned_cols=65  Identities=34%  Similarity=0.592  Sum_probs=57.8

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc--eeeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE--GLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~--~~kvvi~~~   70 (71)
                      ..||++++|++  .|. ..+|+.+++++++|+++++++|||+|+++++.+||+...+++  .+|+++...
T Consensus       287 ~~kE~~~~g~f--ry~-~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~  353 (354)
T KOG0024|consen  287 ALKEVDLRGSF--RYC-NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP  353 (354)
T ss_pred             hhheeeeeeee--eec-cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence            46899999999  554 259999999999999999999999999999999999988866  589999764

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.47  E-value=8.7e-14  Score=83.72  Aligned_cols=69  Identities=46%  Similarity=0.965  Sum_probs=64.1

Q ss_pred             CCcccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            1 MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         1 ~~~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      +.|.++.++.|+.+|++.+++++|.+++.+.++.++++.+|||++||+++++||+.+.+|+.+|.++.+
T Consensus       307 ~~l~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~  375 (375)
T KOG0022|consen  307 FQLVTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM  375 (375)
T ss_pred             hhhccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence            357789999999999988889999999999999999999999999999999999999999999998753

>PLN02827 Alcohol dehydrogenase-like

Probab=99.33  E-value=4.3e-12  Score=77.84  Aligned_cols=69  Identities=58%  Similarity=1.062  Sum_probs=59.1

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEeecC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE   71 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~~~   71 (71)
                      +.++++++|++.+.+....++.++++++.+|+++++++|+++|||+|+++||+.+.+++.+|+||.+.+
T Consensus       310 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~~  378 (378)
T PLN02827        310 FLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMPK  378 (378)
T ss_pred             HhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEecC
Confidence            458999999986544333578999999999999988899999999999999999998887899998753

>PLN02740 Alcohol dehydrogenase-like

Probab=99.25  E-value=1.9e-11  Score=74.97  Aligned_cols=66  Identities=35%  Similarity=0.847  Sum_probs=56.5

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      ++++++.|++.|++....+++++++++.+|++++.++|+++|||+|+++||+.+.+++.+|++|..
T Consensus       316 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~  381 (381)
T PLN02740        316 FDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL  381 (381)
T ss_pred             hcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence            468999999866543235789999999999999989999999999999999999888888999863

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=99.25  E-value=1.6e-11  Score=75.99  Aligned_cols=65  Identities=15%  Similarity=0.176  Sum_probs=55.3

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~~   70 (71)
                      +.++++++|++.+  . ..+++++++++.+|++++.++||++|||+|+++||+.+..+..+|+++.+.
T Consensus       305 ~~~~~~i~g~~~~--~-~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~gKvvl~~~  369 (410)
T cd08238         305 HYNNTHYVGTSGG--N-TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPGGKKLIYTQ  369 (410)
T ss_pred             hhcCcEEEEeCCC--C-HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCCceEEEECC
Confidence            4578999999843  2 267999999999999999999999999999999999998444589999864

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=99.21  E-value=3.6e-11  Score=73.44  Aligned_cols=65  Identities=42%  Similarity=0.815  Sum_probs=54.3

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEE
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCII   67 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi   67 (71)
                      +.+++++.|++.+++.+..+++++++++.+|+++++++|+++|+|+|+++||+.+.+++..|.+|
T Consensus       306 ~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi  370 (371)
T cd08281         306 VAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI  370 (371)
T ss_pred             hhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence            45889999998654333467899999999999999999999999999999999999887654443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=99.21  E-value=3.4e-11  Score=73.36  Aligned_cols=66  Identities=73%  Similarity=1.249  Sum_probs=56.5

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEe
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIR   68 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~   68 (71)
                      +.+++++.|++.+++..+.+++++++++.+|++++.++++++|||+|+++||+.+.+++.+|+++.
T Consensus       304 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~  369 (369)
T cd08301         304 LLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCILH  369 (369)
T ss_pred             HhcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEeC
Confidence            347899999986655433578999999999999999999999999999999999998888898873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=99.19  E-value=7.4e-11  Score=71.31  Aligned_cols=67  Identities=16%  Similarity=0.302  Sum_probs=55.8

Q ss_pred             cccceeEeeeeecccc--cCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYK--PRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~--~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.+++++.|++.+...  ++.++.++++++.+|+++++++|+++|+|+|+++||+.+.++.. +|+++.+
T Consensus       277 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        277 LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             hhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            3478999999854221  13678999999999999999999999999999999999988764 7999875

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=99.19  E-value=6.4e-11  Score=72.01  Aligned_cols=66  Identities=26%  Similarity=0.621  Sum_probs=55.6

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEe
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIR   68 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~   68 (71)
                      +.++++++|++.+...+..+++++++++++|++++.++|+++|||+|+++||+.+.+++..|+++.
T Consensus       292 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~  357 (358)
T TIGR03451       292 FGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE  357 (358)
T ss_pred             hhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence            357889999875433234678999999999999998999999999999999999988887888875

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=99.17  E-value=1.4e-10  Score=70.22  Aligned_cols=63  Identities=14%  Similarity=0.360  Sum_probs=54.7

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~   69 (71)
                      +.+++++.|++  .+  ..+++++++++.+|++++.++|+++|||+|+++||+.+.+++ .+|+++.+
T Consensus       280 ~~k~~~i~g~~--~~--~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        280 IVKEISLKGSF--RF--TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             HhCCcEEEEEe--ec--cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            36789999988  33  268999999999999999899999999999999999988766 48999875

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=99.17  E-value=9.4e-11  Score=70.55  Aligned_cols=64  Identities=22%  Similarity=0.443  Sum_probs=55.3

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      +.+++++.|++.+  . .+++.++++++.+|.+++.++++++|+|+|+++||+.+.++..+|+++.+
T Consensus       276 ~~~~~~i~g~~~~--~-~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~  339 (339)
T cd08239         276 IRKQRTLIGSWYF--S-VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF  339 (339)
T ss_pred             HhCCCEEEEEecC--C-HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence            3578999999843  2 26799999999999999999999999999999999998887678999875

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=99.17  E-value=8.5e-11  Score=71.59  Aligned_cols=65  Identities=31%  Similarity=0.506  Sum_probs=55.8

Q ss_pred             CcccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeecC
Q 035170            2 NLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRMEE   71 (71)
Q Consensus         2 ~~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~~   71 (71)
                      +++++++|.||..|+   +.++++++++..+|++.+  .+++.++|+|+++||+.|.+++. +|.||++.+
T Consensus       274 li~~~~~i~GS~~g~---~~d~~e~l~f~~~g~Ikp--~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~~  339 (339)
T COG1064         274 LILKEISIVGSLVGT---RADLEEALDFAAEGKIKP--EILETIPLDEINEAYERMEKGKVRGRAVIDMSS  339 (339)
T ss_pred             hhhcCeEEEEEecCC---HHHHHHHHHHHHhCCcee--eEEeeECHHHHHHHHHHHHcCCeeeEEEecCCC
Confidence            356899999999764   378999999999998854  66579999999999999999886 899998753

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=99.15  E-value=1e-10  Score=70.03  Aligned_cols=63  Identities=27%  Similarity=0.433  Sum_probs=52.8

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcC-ceeeEEEe
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG-EGLRCIIR   68 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~-~~~kvvi~   68 (71)
                      +.++++++|+.  .+.+ .+++++++++.+|+++++++++++|||+|+++||+.+.++ ..+|+++.
T Consensus       245 ~~~~~~i~~~~--~~~~-~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       245 FMKEARLRIAA--EWQP-GDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             hhcceEEEEec--ccch-hHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            45788999987  3332 6799999999999999999999999999999999987654 45899874

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=99.15  E-value=1.3e-10  Score=70.98  Aligned_cols=65  Identities=23%  Similarity=0.470  Sum_probs=55.5

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc--eeeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE--GLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~--~~kvvi~~   69 (71)
                      +.|+++++|++.. +. ..+|+.+++++++|++++.++++|+++++|+++||+.+.+++  .+|+++.+
T Consensus       284 ~~kel~l~gs~~~-~~-~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         284 VSKELTLRGSLRP-SG-REDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             HhcccEEEeccCC-CC-cccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            4689999999621 22 368999999999999999999999999999999999998754  57999864

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=99.15  E-value=1.3e-10  Score=70.99  Aligned_cols=64  Identities=41%  Similarity=0.849  Sum_probs=52.7

Q ss_pred             ceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            6 ERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         6 ~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      +..+.|++.++.....+++++++++.+|+++++++++++|||+|+++||+.+.+++.+|+++.+
T Consensus       305 ~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~  368 (368)
T TIGR02818       305 GRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY  368 (368)
T ss_pred             cceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence            4457888754322235789999999999999999999999999999999999887778999864

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=99.13  E-value=1.3e-10  Score=70.92  Aligned_cols=64  Identities=50%  Similarity=0.943  Sum_probs=54.5

Q ss_pred             cceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEe
Q 035170            5 NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIR   68 (71)
Q Consensus         5 ~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~   68 (71)
                      +++++.|++.|++....+++++++++.+++++++++++++|+|+|+++||+.+.+++.+|+++.
T Consensus       302 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~  365 (365)
T cd08277         302 LGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT  365 (365)
T ss_pred             hCCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence            4789999986654323578999999999999999999999999999999999888777898863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=99.11  E-value=2.1e-10  Score=70.02  Aligned_cols=63  Identities=46%  Similarity=0.896  Sum_probs=52.4

Q ss_pred             ceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEe
Q 035170            6 ERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIR   68 (71)
Q Consensus         6 ~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~   68 (71)
                      +.++.|+..|.+....+++++++++.+|++++.++|+++|||+|+++||+.+.+++..|++++
T Consensus       306 ~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~  368 (368)
T cd08300         306 GRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK  368 (368)
T ss_pred             cCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence            456777765544333678999999999999998999999999999999999988877899874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=99.03  E-value=6.7e-10  Score=68.72  Aligned_cols=63  Identities=5%  Similarity=0.159  Sum_probs=49.1

Q ss_pred             cceeEeeeeecccccCCCHHHHHHHHHcCCCcccccee-eeeehhhHHHHHHHHhcCceeeEEEeec
Q 035170            5 NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFIT-HTVPFSEINKAFEYMLRGEGLRCIIRME   70 (71)
Q Consensus         5 ~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it-~~~~l~~~~~a~~~~~~~~~~kvvi~~~   70 (71)
                      +++++.|+.  . .....+.++++++.+|+++++++++ |+|||+|+++||+.+.+++.+|+++.+.
T Consensus       328 ~~~~i~g~~--~-~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~~Kvvi~~~  391 (393)
T TIGR02819       328 KSHSFHTGQ--T-PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAAKKFVIDPH  391 (393)
T ss_pred             cCceEEecc--C-ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCceEEEEeCC
Confidence            455566543  1 1112337899999999999998888 7899999999999998887799999874

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=98.93  E-value=3.6e-09  Score=64.21  Aligned_cols=62  Identities=15%  Similarity=0.288  Sum_probs=51.5

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .+++++.|++.  +.+ .+++++++++.+|++++.++++ +|||+|+++||+.+.+++. +|+++++
T Consensus       287 ~~~~~~~g~~~--~~~-~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       287 AFHARALGNWG--CPP-DRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             hcccEEEEEec--CCH-HHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence            46788999883  333 6799999999999999888886 7999999999999988774 6888754

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=98.87  E-value=3.7e-09  Score=64.12  Aligned_cols=65  Identities=25%  Similarity=0.300  Sum_probs=51.0

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcC---CCccccceeeeeeh---hhHHHHHHHHhcCceeeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSK---ELEVEKFITHTVPF---SEINKAFEYMLRGEGLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g---~~~~~~~it~~~~l---~~~~~a~~~~~~~~~~kvvi~~~   70 (71)
                      +.++++++|++.+  . ..+++++++++.+|   +.+++++|+++|+|   +|++++|+...++..+|+++.++
T Consensus       270 ~~k~~~i~g~~~~--~-~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~  340 (341)
T cd08237         270 LEKGLTLVGSSRS--T-REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE  340 (341)
T ss_pred             hhCceEEEEeccc--C-HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence            4589999999832  2 26799999999999   44678899999998   56777777766555689999875

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=98.87  E-value=6.6e-09  Score=63.96  Aligned_cols=61  Identities=18%  Similarity=0.346  Sum_probs=50.7

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.++++++|++.++  . .++.++++++++|++++  .+ ++|||+|+++||+.+.+++. +|+++.+
T Consensus       287 ~~~~~~i~g~~~~~--~-~~~~~~~~l~~~g~i~~--~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        287 VLGRKMVGGSQIGG--M-KETQEMLEFCAKHKIVS--DI-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             HhCCeEEEEeCccC--H-HHHHHHHHHHHhCCCcc--cE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            35789999998443  2 67899999999999875  45 58999999999999988775 7999876

>cd08230 glucose_DH Glucose dehydrogenase

Probab=98.85  E-value=6.6e-09  Score=63.15  Aligned_cols=63  Identities=24%  Similarity=0.412  Sum_probs=50.9

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCC----CccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE----LEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~----~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      +.+++++.|++.+  . ..++.++++++.++.    .+++++++++|+|+|+++||+.+.++. +|+++.+
T Consensus       289 ~~k~~~i~g~~~~--~-~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~  355 (355)
T cd08230         289 VLGNKALVGSVNA--N-KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW  355 (355)
T ss_pred             hhcCcEEEEecCC--c-hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence            4588999999843  3 368999999999887    236779999999999999999876554 6999875

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=98.81  E-value=1.2e-08  Score=61.74  Aligned_cols=59  Identities=24%  Similarity=0.329  Sum_probs=48.6

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEE
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCII   67 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi   67 (71)
                      +.+++++.|++.  .. +.++.++++++.+|+++   +++++|||+|+++||+.+.+++. +|+++
T Consensus       269 ~~~~~~i~g~~~--~~-~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       269 LFYERQIRSVTS--NT-RADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             hhCCcEEEEeec--CC-HHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            457889999873  22 25788999999999885   46899999999999999988775 79887

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=98.81  E-value=2.1e-08  Score=53.00  Aligned_cols=45  Identities=20%  Similarity=0.285  Sum_probs=36.5

Q ss_pred             CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEE
Q 035170           21 SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCII   67 (71)
Q Consensus        21 ~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi   67 (71)
                      +.++++.+++.+|++.+  .|+++|||+++++|++.+.++.. +|+||
T Consensus        82 ~~l~~l~~l~~~G~l~~--~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   82 EALEELAELVAEGKLKP--PIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             HHHHHHHHHHHCCCeEE--eeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            34899999999998854  78899999999999999998875 89986

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=98.81  E-value=1.5e-08  Score=61.82  Aligned_cols=62  Identities=23%  Similarity=0.458  Sum_probs=51.0

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      +.+++++.|++.++   ..++.++++++.+|+++  +++ ++|||+|+.+||+.+.+++. +|+++.++
T Consensus       289 ~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~  351 (357)
T PLN02514        289 MLGRKVITGSFIGS---MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA  351 (357)
T ss_pred             hhCCcEEEEEecCC---HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence            45789999998543   25799999999999864  566 58999999999999988775 79999874

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=98.77  E-value=1.8e-08  Score=61.60  Aligned_cols=61  Identities=18%  Similarity=0.339  Sum_probs=49.8

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.+++.+.|++.++  . .+++++++++++|++++  .+ ++|||+|+++||+.+.+++. +|+++.+
T Consensus       292 ~~~~~~i~g~~~~~--~-~~~~~~~~li~~g~i~~--~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        292 VLGRKLVGGSDIGG--I-KETQEMLDFCAKHNITA--DI-ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             HhCCeEEEEcCcCC--H-HHHHHHHHHHHhCCCCC--cE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            34678888988442  2 57999999999999975  45 58999999999999988875 7999876

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=98.76  E-value=3.6e-08  Score=59.69  Aligned_cols=63  Identities=29%  Similarity=0.635  Sum_probs=52.4

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhH-HHHHHHHhcCce--eeEEEe
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEI-NKAFEYMLRGEG--LRCIIR   68 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~-~~a~~~~~~~~~--~kvvi~   68 (71)
                      +.++++|.|++.  +. .++++++++++.+|++++.++++++|+|+|+ ++||+.+.++..  +|++|.
T Consensus       286 ~~~~~~i~g~~~--~~-~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         286 VLKEKTLTGSIC--YT-REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             HhhCcEEEEEec--cC-cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence            357899999873  32 3789999999999999988899999999997 689999888763  899873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=98.75  E-value=3.2e-08  Score=60.15  Aligned_cols=64  Identities=27%  Similarity=0.432  Sum_probs=53.7

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcC--CCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSK--ELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g--~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      +.+++++.|++.  +.+ .++.++++++.++  .+++.++++++|+++|+++||+.+.++..+|++|.+
T Consensus       296 ~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~  361 (361)
T cd08231         296 VRKNLTIIGVHN--YDP-SHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP  361 (361)
T ss_pred             hhcccEEEEccc--CCc-hhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence            457889999873  333 6799999999998  677888999999999999999998887778999864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=98.73  E-value=2e-08  Score=61.17  Aligned_cols=66  Identities=14%  Similarity=0.175  Sum_probs=51.7

Q ss_pred             cccceeEeeeeecccc--cCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeec
Q 035170            3 LLNERTLKGTFFGNYK--PRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~--~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      +.+++++.|++.+.+.  ....+.++++++++|++++  .++.+|||+++++|++.+.+++. +|+++++.
T Consensus       278 ~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~--~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~  346 (348)
T PLN03154        278 ISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY--IEDMSEGLESAPAALVGLFSGKNVGKQVIRVA  346 (348)
T ss_pred             hhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC--ceecccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence            3578899998743221  1145788999999998864  57778999999999999988875 79999874

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.60  E-value=2.1e-07  Score=56.70  Aligned_cols=63  Identities=22%  Similarity=0.418  Sum_probs=53.7

Q ss_pred             CcccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeec
Q 035170            2 NLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         2 ~~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      +.++.+.|.||+.|+.   .+.++++++.++|.+.+  .| +..+++++++||+.|..++. .|.|++.+
T Consensus       292 lil~~~~I~GS~vG~~---ket~E~Ldf~a~~~ik~--~I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s  355 (360)
T KOG0023|consen  292 LILGRKSIKGSIVGSR---KETQEALDFVARGLIKS--PI-ELVKLSEVNEAYERMEKGDVRYRFVVDVS  355 (360)
T ss_pred             hhcccEEEEeeccccH---HHHHHHHHHHHcCCCcC--ce-EEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence            3568899999998863   78999999999998754  55 58999999999999999986 79998864

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=98.57  E-value=3.6e-07  Score=54.58  Aligned_cols=61  Identities=25%  Similarity=0.353  Sum_probs=50.3

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      +.++.++.|++.      ..+.++++++.+|++++.+++++.||++++++||+.+.++..+|+++.+
T Consensus       259 ~~~~~~i~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~  319 (319)
T cd08242         259 VVNEITLVGSRC------GPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP  319 (319)
T ss_pred             eecceEEEEEec------ccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence            356777887762      2488999999999998777889999999999999998876668999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=98.52  E-value=4.2e-07  Score=55.85  Aligned_cols=66  Identities=36%  Similarity=0.821  Sum_probs=53.0

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      .++.++.|++.|.+....++.++++.+.++.++++++++++|+++|+.+||+.+.+++..|+++.+
T Consensus       308 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~  373 (373)
T cd08299         308 LTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF  373 (373)
T ss_pred             hcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence            457788888765443225678888888888888888899999999999999998877777888753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=98.48  E-value=3.9e-07  Score=54.72  Aligned_cols=63  Identities=8%  Similarity=0.201  Sum_probs=47.3

Q ss_pred             cccceeEeeeeeccccc---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEe
Q 035170            3 LLNERTLKGTFFGNYKP---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIR   68 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~   68 (71)
                      +.+++++.|++.+.+..   ...+.++++++. |.+  +++++++|||+|+++||+.+.++. .+|+++.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         258 IFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             hhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence            45788999988543321   135677788887 755  568999999999999999988865 4898873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=98.39  E-value=1.1e-06  Score=53.84  Aligned_cols=64  Identities=42%  Similarity=0.841  Sum_probs=52.0

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEE
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCII   67 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi   67 (71)
                      .++.+++|++.+++.....+.+++++++++.+++.+++++.++++++++||+.+.+++..|+++
T Consensus       301 ~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~  364 (365)
T cd05279         301 LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTIL  364 (365)
T ss_pred             hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeee
Confidence            4567788887543333367899999999999988778899999999999999988877778776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>PRK10083 putative oxidoreductase; Provisional

Probab=98.39  E-value=1.8e-06  Score=51.95  Aligned_cols=63  Identities=21%  Similarity=0.385  Sum_probs=51.0

Q ss_pred             cceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc--eeeEEEeecC
Q 035170            5 NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE--GLRCIIRMEE   71 (71)
Q Consensus         5 ~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~--~~kvvi~~~~   71 (71)
                      +++++.|+..   . ...+.++++++.+|.+++.+++++.|+++++++|++.+.++.  .+|+++.+.|
T Consensus       275 ~~~~~~~~~~---~-~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        275 KELSIFSSRL---N-ANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             cceEEEEEec---C-hhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence            5677777762   1 367999999999999988767889999999999999987543  4899998764

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=98.33  E-value=3.2e-06  Score=51.30  Aligned_cols=63  Identities=17%  Similarity=0.259  Sum_probs=47.8

Q ss_pred             cceeEeeeeecccccCCCHHHHHHHHHcCCCcccccee-eeeehhhHHHHHHHHhcCc--eeeEEEee
Q 035170            5 NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFIT-HTVPFSEINKAFEYMLRGE--GLRCIIRM   69 (71)
Q Consensus         5 ~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it-~~~~l~~~~~a~~~~~~~~--~~kvvi~~   69 (71)
                      +..++.+++.  ......++++++++.+|.+++..+++ +.++|+|+++|++.+.+++  .+|+++.+
T Consensus       286 ~~~~i~~~~~--~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         286 GHKTINGGLC--PGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             cccEEEEeec--CCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            4556666552  21236899999999999998855544 5699999999999988865  48999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=98.33  E-value=1.8e-06  Score=52.11  Aligned_cols=64  Identities=16%  Similarity=0.342  Sum_probs=52.0

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      +.+++++.|+..  .. ...+.++++++.+|.+++.+++++.++++++++|++.+.++...|++|++
T Consensus       282 ~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~~  345 (345)
T cd08287         282 FFRNVGLAGGPA--PV-RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLRP  345 (345)
T ss_pred             HhcceEEEEecC--Cc-HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeCC
Confidence            456788887652  22 26789999999999998877788999999999999998877767999864

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=98.26  E-value=4.1e-06  Score=50.50  Aligned_cols=62  Identities=21%  Similarity=0.382  Sum_probs=49.9

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      .+++++.+++  .+.+ ..+.++++++.+|.+++.+++++.+++++++++++.+.++.. +|++++
T Consensus       279 ~~~~~~~~~~--~~~~-~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         279 RKELTLQFSL--GYTP-EEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             hcceEEEEEe--cccH-HHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            3667777766  3333 578999999999999877788899999999999999888664 788863

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=98.20  E-value=7.3e-06  Score=49.53  Aligned_cols=63  Identities=24%  Similarity=0.411  Sum_probs=49.7

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcC---ceeeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG---EGLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~---~~~kvvi~~   69 (71)
                      +.+++++.+...+    ...+.++++++++|.+++.+++++++++++++++++.+.+.   +.+|++|+|
T Consensus       280 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         280 WIKNITITTGLVD----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             hhcCcEEEeecCc----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            3467777775421    15688899999999998877788999999999999998875   357999875

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=98.17  E-value=7.2e-06  Score=50.39  Aligned_cols=62  Identities=5%  Similarity=0.064  Sum_probs=48.5

Q ss_pred             cceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            5 NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         5 ~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      ++..+.|++.  .. ...+..+++++.++++++.++++++++++++++|++.+.++...|+++.+
T Consensus       314 ~~~~~~~~~~--~~-~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~  375 (375)
T cd08282         314 KGLSFGTGQA--PV-KKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP  375 (375)
T ss_pred             cCcEEEEecC--Cc-hhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence            4555666652  22 36788899999999998766789999999999999998876666888753

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=98.15  E-value=8.2e-06  Score=50.40  Aligned_cols=63  Identities=22%  Similarity=0.318  Sum_probs=50.4

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc--eeeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE--GLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~--~~kvvi~~   69 (71)
                      .+++++.++.  .+. ...+.++++++.++.+++.+++++.|+++++.+|++.+..++  .+|+++++
T Consensus       322 ~~~~~i~~~~--~~~-~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  386 (386)
T cd08283         322 NKGLTLRMGQ--THV-QRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP  386 (386)
T ss_pred             hCCcEEEecc--CCc-hHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            4667777765  222 367899999999999988777888999999999999988765  47999864

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=98.12  E-value=1e-05  Score=49.53  Aligned_cols=64  Identities=25%  Similarity=0.530  Sum_probs=49.0

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEe
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIR   68 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~   68 (71)
                      .+++++.++..+...+...+.++++++.+|++++.++++ .++++++++|++.+.++...|++++
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~-~~~l~~~~~a~~~~~~~~~~k~~~~  365 (365)
T cd08278         302 VSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVT-FYPFEDINQAIADSESGKVIKPVLR  365 (365)
T ss_pred             hcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHheE-EecHHHHHHHHHHHHCCCceEEEEC
Confidence            467778777643222335678899999999987655665 8999999999999988877898874

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=98.11  E-value=9.1e-07  Score=52.44  Aligned_cols=45  Identities=18%  Similarity=0.414  Sum_probs=37.2

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHc--CCCccccceeeeeehhhH
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMS--KELEVEKFITHTVPFSEI   50 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~--g~~~~~~~it~~~~l~~~   50 (71)
                      +.+++++.|++.  +.+ .+++++++++.+  ++++++++|||+|||+|+
T Consensus       234 ~~~~~~i~g~~~--~~~-~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       234 VRRWLTIRGVHN--YEP-RHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             HhCCcEEEecCC--CCH-HHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            458999999983  333 679999999998  578888999999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=98.09  E-value=1.7e-05  Score=48.95  Aligned_cols=62  Identities=19%  Similarity=0.234  Sum_probs=48.3

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEE
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCII   67 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi   67 (71)
                      .+..++.|+..  ......+.++++++++|.+++..++++.|+++++++|++.+.++..+|+++
T Consensus       322 ~~~~~l~~~~~--~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv  383 (384)
T cd08265         322 VRRAQIVGAQG--HSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI  383 (384)
T ss_pred             hCceEEEEeec--cCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence            35667888762  111256999999999999987777889999999999999976665678775

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=98.06  E-value=2.9e-05  Score=46.93  Aligned_cols=65  Identities=23%  Similarity=0.375  Sum_probs=48.7

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~~   70 (71)
                      +++++++.|++....  ...+..+++++.++ +++.+++++.++++++++||+.+..+..+|++++|+
T Consensus       277 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~  341 (341)
T PRK05396        277 IFKGLTIKGIYGREM--FETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD  341 (341)
T ss_pred             hhcceEEEEEEccCc--cchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence            346778888752211  24566788999998 556667889999999999999987765689998764

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=98.04  E-value=1.3e-05  Score=48.42  Aligned_cols=60  Identities=15%  Similarity=0.462  Sum_probs=48.5

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      +.+++++.|++.+  .+ .++..+++++.+|++++  .+ +.++++++++||+.+.+++. +|+|++
T Consensus       277 ~~~~~~i~~~~~~--~~-~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         277 IFGRKSVAGSLIG--GR-KETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             hcCceEEEEeccc--CH-HHHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            3578999998843  32 67899999999998764  45 68999999999999998775 798874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=98.03  E-value=2.9e-05  Score=46.82  Aligned_cols=62  Identities=19%  Similarity=0.423  Sum_probs=49.7

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~   69 (71)
                      .+++++.|.+  .+  ...+.++++++.+|.+++.+++++.|++++++++++.+.++. .+|+++++
T Consensus       277 ~~~~~~~~~~--~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         277 AKELDLRGSF--RF--DDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             hcceEEEEEe--cC--HHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            4667777765  22  257889999999999887777888999999999999987765 47998864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=98.03  E-value=2.3e-05  Score=47.60  Aligned_cols=60  Identities=25%  Similarity=0.530  Sum_probs=47.6

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEE
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCII   67 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi   67 (71)
                      .+++++.|+..+    ...+.++++++.+|.+++.+++++.|+++++++|++.+.++. .+|+++
T Consensus       290 ~~~~~i~~~~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         290 RKELDVLGSHLG----PYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             ccccEEEEeccC----chhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            456778887632    146889999999999987766789999999999999988765 367764

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=98.01  E-value=3.4e-05  Score=46.64  Aligned_cols=64  Identities=25%  Similarity=0.374  Sum_probs=48.8

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      .+++++.|.+ +... ...+.++++++.+|.+++.+++++.++++++.++++.+.++..+|+++++
T Consensus       277 ~~~~~~~~~~-~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~  340 (340)
T TIGR00692       277 FKGLTIYGIT-GRHM-FETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL  340 (340)
T ss_pred             hcceEEEEEe-cCCc-hhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            3566777655 1111 24578899999999998767788999999999999998876668998864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=98.01  E-value=3.4e-05  Score=47.16  Aligned_cols=63  Identities=35%  Similarity=0.732  Sum_probs=48.3

Q ss_pred             cceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEE
Q 035170            5 NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCII   67 (71)
Q Consensus         5 ~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi   67 (71)
                      ++..+.|++.+.......+.++++++.++.+++.+++++.++++|+.+|++.+.+++..|.|+
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         300 SEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             cCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            455667765443222367889999999999987767888999999999999988877666655

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=98.00  E-value=1.2e-05  Score=48.61  Aligned_cols=64  Identities=13%  Similarity=0.184  Sum_probs=46.3

Q ss_pred             ccceeEeeeeeccccc--CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            4 LNERTLKGTFFGNYKP--RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~--~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .+++++.|++.+.+..  ...+.++++++.+|++++.  +...|||+++++|++.+.+++. +|+++++
T Consensus       272 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         272 YKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             hccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            4667888866332210  1236778899999988764  4457999999999999988764 7998863

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PLN02702 L-idonate 5-dehydrogenase

Probab=97.98  E-value=3.1e-05  Score=47.31  Aligned_cols=61  Identities=31%  Similarity=0.561  Sum_probs=48.1

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeeh--hhHHHHHHHHhcCc-eeeEEEe
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPF--SEINKAFEYMLRGE-GLRCIIR   68 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l--~~~~~a~~~~~~~~-~~kvvi~   68 (71)
                      .+++++.|++  .+  ...+..+++++.++++++.+++++.|++  +++++|++.+.++. .+|+++.
T Consensus       300 ~~~~~i~~~~--~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        300 AREVDVVGVF--RY--RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             hCccEEEEec--cC--hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            4677888876  23  2578899999999999877778888665  79999999887765 4799885

>cd05281 TDH Threonine dehydrogenase

Probab=97.97  E-value=4.5e-05  Score=46.17  Aligned_cols=64  Identities=22%  Similarity=0.285  Sum_probs=48.5

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      .+++++.|...  ......+.++++++.+|.+++.+++++.+++++++++|+.+.++..+|++++|
T Consensus       278 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~  341 (341)
T cd05281         278 FKGLTVQGITG--RKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP  341 (341)
T ss_pred             ccceEEEEEec--CCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence            35666766541  11124577899999999988777788899999999999998876666988865

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=97.94  E-value=2.7e-05  Score=47.65  Aligned_cols=63  Identities=32%  Similarity=0.509  Sum_probs=48.8

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      .+++++.|++  ...+...+.++++++.++.+++..++++.++++++.++++.+.++.. +|+|+.
T Consensus       304 ~~~~~~~~~~--~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         304 RRGIKIIGSY--GARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             hCCeEEEecC--CCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            4667777765  22223568889999999998876678899999999999999888764 688863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=97.94  E-value=8.1e-06  Score=51.37  Aligned_cols=65  Identities=12%  Similarity=0.087  Sum_probs=52.2

Q ss_pred             ccceeEeeeeecccccCCCHH--HHHHHHHcCCC-ccccceeee-----eehh-hHHHHHHHHhcCce--eeEEEeec
Q 035170            4 LNERTLKGTFFGNYKPRSDLP--SVVEKYMSKEL-EVEKFITHT-----VPFS-EINKAFEYMLRGEG--LRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~--~~i~l~~~g~~-~~~~~it~~-----~~l~-~~~~a~~~~~~~~~--~kvvi~~~   70 (71)
                      .+++++.|++  .+....+|+  +.++++++|++ ++.++++|.     ++|+ |+.++++.+.+++.  .|+++.|.
T Consensus       302 ~~el~i~g~~--~~~~~~~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         302 ENAVEVVNIK--PQVDRYELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             hhccEEEEcc--CCcceEEcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence            4688999998  343222566  79999999999 999999999     9999 99999999987653  68887763

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=97.93  E-value=4.2e-05  Score=46.16  Aligned_cols=63  Identities=22%  Similarity=0.287  Sum_probs=49.1

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      .+++++.+...  .. ...+.++++++.++.+++.+++++.+++++++++|+.+..++.+|+++.+
T Consensus       282 ~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~~  344 (344)
T cd08284         282 NKNLTLRFGRC--PV-RSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLDP  344 (344)
T ss_pred             hcCcEEEEecC--Cc-chhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEecC
Confidence            45677766541  22 36899999999999998777788899999999999988776558888753

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=97.90  E-value=4.9e-05  Score=45.69  Aligned_cols=61  Identities=18%  Similarity=0.275  Sum_probs=48.0

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .+++++.|++.  .. ..++.++++++.+|.++  +.+++.++++++++|++.+.++.. +|+++.+
T Consensus       272 ~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        272 LKDIEIIGHIS--AT-KRDVEEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             hcccEEEEecC--CC-HHHHHHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            46778888762  22 26789999999999875  457889999999999999887654 7888865

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.89  E-value=3.8e-05  Score=46.35  Aligned_cols=62  Identities=24%  Similarity=0.314  Sum_probs=49.0

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.+++++.|+..+  . ...+.++++++.++++++  ++++.++++++.++|+.+..+.. .|+++.|
T Consensus       288 ~~~~~~~~~~~~~--~-~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         288 YLKDLTLFGSTLG--T-REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             hhcceEEEEeecC--C-HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            4567888888743  2 267899999999998754  57789999999999999887654 6888864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.88  E-value=2.8e-05  Score=46.77  Aligned_cols=63  Identities=17%  Similarity=0.319  Sum_probs=46.0

Q ss_pred             ccceeEeeeeeccccc---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            4 LNERTLKGTFFGNYKP---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      ++++++.|++.+.+.+   ...+.++++++.+|++++.  +...|+|+++++|++.+.+++. +|+++.
T Consensus       259 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       259 YQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             hhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence            3677888876322211   1357889999999998765  4457899999999999988764 788863

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=97.83  E-value=6e-05  Score=45.54  Aligned_cols=59  Identities=17%  Similarity=0.399  Sum_probs=46.9

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      .+++++.|+..+  .. .++..+++++.++.++  +++ +.||++|+.+|++.+.+++. +|++++
T Consensus       274 ~~~~~i~~~~~~--~~-~~~~~~~~~~~~~~l~--~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         274 MGRKSIHGWPSG--TA-LDSEDTLKFSALHGVR--PMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             hcccEEEEeCcC--CH-HHHHHHHHHHHhCCCC--ceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            678999998733  22 5788999999888775  456 58999999999999888765 798874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=97.82  E-value=6.6e-05  Score=46.38  Aligned_cols=60  Identities=12%  Similarity=0.262  Sum_probs=47.1

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcC-ce-eeEEEe
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG-EG-LRCIIR   68 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~-~~-~kvvi~   68 (71)
                      .++.++.|++.+  .. .++.++++++.++.+++  .++++|+++|+++|++.+.++ .. +|+++.
T Consensus       331 ~~~~~i~g~~~~--~~-~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         331 MRQKRIQGSHFA--ND-REAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             hheeEEEecccC--cH-HHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence            467788888733  22 57889999999998764  578899999999999998877 43 688764

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=97.81  E-value=7.1e-05  Score=45.28  Aligned_cols=62  Identities=16%  Similarity=0.137  Sum_probs=48.8

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      .+++++.|+..  .. ...+.+++++++++.+++.+++++.++++++++|++.+..+.. +|++++
T Consensus       282 ~~~~~~~~~~~--~~-~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         282 ARELEIVGSHG--MP-AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             hcccEEEeCCc--CC-HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            45677888762  22 3678999999999998876667889999999999999887654 677763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=97.74  E-value=0.00018  Score=43.45  Aligned_cols=61  Identities=31%  Similarity=0.598  Sum_probs=47.4

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEE
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCII   67 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi   67 (71)
                      .+++++.+++  ...+ ..+.++++++.++.+++.+.+...++++++.++++.+..++..|+++
T Consensus       282 ~~~~~l~~~~--~~~~-~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi  342 (343)
T cd08235         282 YREITITGSY--AASP-EDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVI  342 (343)
T ss_pred             hCceEEEEEe--cCCh-hhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEEEe
Confidence            3566777766  2333 67889999999998876556778899999999999988766568876

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.74  E-value=5.3e-05  Score=45.33  Aligned_cols=64  Identities=19%  Similarity=0.309  Sum_probs=45.5

Q ss_pred             ccceeEeeeeecccc--cCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            4 LNERTLKGTFFGNYK--PRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~--~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .+++++.|++.+.+.  ....+.++++++.+|.+++.+  ...++++++++|++.+.+++. +|+++++
T Consensus       263 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~--~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         263 FKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYRE--HVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             hhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCc--ccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            467788887632210  012366788999999987653  346899999999999888764 7998863

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=97.70  E-value=0.00021  Score=43.32  Aligned_cols=60  Identities=30%  Similarity=0.617  Sum_probs=47.1

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc--eeeEEE
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE--GLRCII   67 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~--~~kvvi   67 (71)
                      .+++++.+++  .+  ...+.++++++.++.+++.+++++.|+++++.+|++.+.++.  .+|++|
T Consensus       280 ~~~~~~~~~~--~~--~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         280 LREIDIRGVF--RY--ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             hCCcEEEEec--cC--hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            3566777765  22  257889999999998876566788999999999999988764  489987

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=97.66  E-value=0.00016  Score=44.91  Aligned_cols=61  Identities=13%  Similarity=0.266  Sum_probs=46.9

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .++.++.|++.+..   .++.++++++.++.+++  .++++++++|++++|+.+.++.. +|+++.+
T Consensus       326 ~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  387 (398)
T TIGR01751       326 MRQKRIQGSHFANL---REAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQDVHRNHHQGNVAVLV  387 (398)
T ss_pred             hcccEEEccccCcH---HHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHHHHHcCCCCceEEEEe
Confidence            35566777764322   45788999999998864  57899999999999999887664 7888875

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=97.66  E-value=0.00013  Score=43.75  Aligned_cols=46  Identities=11%  Similarity=0.119  Sum_probs=38.3

Q ss_pred             HHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEee
Q 035170           24 PSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRM   69 (71)
Q Consensus        24 ~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~   69 (71)
                      .++++++.+|.+++..+.+++|++++++++++.+.++. ..|+++.+
T Consensus       281 ~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  327 (327)
T PRK10754        281 NELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_pred             HHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            45788999999987666678999999999999988766 47999864

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=97.65  E-value=0.00022  Score=42.94  Aligned_cols=61  Identities=23%  Similarity=0.369  Sum_probs=47.4

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.+++++.++..+  . ...+.++++++.+|.+++  . .+.|+++++++|++.+.+++. +|+++.|
T Consensus       279 ~~~~~~~~~~~~~--~-~~~~~~~~~~l~~g~l~~--~-~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         279 VPTEISVIGSLWG--T-RAELVEVVALAESGKVKV--E-ITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             hhcceEEEEEecc--c-HHHHHHHHHHHHhCCCCc--c-eEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            3578888887632  2 267899999999998764  3 468999999999999888764 6888764

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=97.62  E-value=0.00029  Score=41.79  Aligned_cols=64  Identities=19%  Similarity=0.295  Sum_probs=46.8

Q ss_pred             ccceeEeeeeecccc-cCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce--eeEEE
Q 035170            4 LNERTLKGTFFGNYK-PRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG--LRCII   67 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~-~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~--~kvvi   67 (71)
                      .+++++.+...+... ....+.++++++.+|.+++.+.+++.+++++++++++.+.+++.  +|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         245 WKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             hcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            355666665422110 12568889999999998765567789999999999999988753  78886

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.62  E-value=0.00023  Score=42.45  Aligned_cols=62  Identities=13%  Similarity=0.223  Sum_probs=47.0

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.+++++.|++.  .. ...+.++++++.++.+++  ++++.|++++++++++.+..+.. .|+++++
T Consensus       280 ~~~~~~~~~~~~--~~-~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         280 FWRQLSILGSTM--GT-KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             hhcceEEEEEec--CC-HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            345677777762  22 256888999999998754  67889999999999999877654 6888764

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=97.59  E-value=0.00028  Score=42.31  Aligned_cols=60  Identities=27%  Similarity=0.419  Sum_probs=47.1

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .++.++.|++.  ..+ ..+..+++++.+|.+++.   .+.+++++++++++.+.+++. +|+++.|
T Consensus       278 ~~~~~~~~~~~--~~~-~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         278 ARELRIIGSFG--GTP-EDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             hCccEEEEecc--CCH-HHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            45677888772  232 678899999999988764   468999999999999887664 7988875

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.57  E-value=0.00021  Score=43.71  Aligned_cols=64  Identities=19%  Similarity=0.272  Sum_probs=44.7

Q ss_pred             ccceeEeeeeecccc---cCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcC-c-eeeEEEee
Q 035170            4 LNERTLKGTFFGNYK---PRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG-E-GLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~---~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~-~-~~kvvi~~   69 (71)
                      .+.+.++|+..+...   ..+.+.++.+++.+|.+  ++.|+.+|||+|..++......+ + .+|+++.+
T Consensus       258 ~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l--~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         258 GKRLTLRGVTLGSRDPEALAEALAELFDLLASGKL--KPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             hccEEEEEecceecchHHHHHHHHHHHHHHHcCCC--cceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            367788888743220   12467778999999987  45888999999976665543333 4 48999874

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.56  E-value=0.00023  Score=42.14  Aligned_cols=63  Identities=19%  Similarity=0.201  Sum_probs=47.3

Q ss_pred             cceeEeeeeecc-cccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            5 NERTLKGTFFGN-YKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         5 ~~~~i~Gs~~g~-~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      ++.++.+++.+. ......+..+++++.++++++  .+.+++++++++++++.+..+.. +|+++.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         241 GGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDP--RIGWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             ccceEEEEEccCHHHHHHHHHHHHHHHHCCCccc--eeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            477888877432 011246788899999999875  46789999999999999887664 7888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=97.53  E-value=0.00048  Score=41.57  Aligned_cols=63  Identities=22%  Similarity=0.398  Sum_probs=47.4

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce--eeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG--LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~--~kvvi~~   69 (71)
                      .+++++.++..+  . ...+.++++++.+|.+++.+++...+++++++++++.+..++.  .|+++++
T Consensus       283 ~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         283 GKNLTFKTGLVP--V-RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             hceeEEEeeccC--c-hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence            456666665421  1 2578899999999998876666788999999999998877653  6888764

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=97.48  E-value=0.0004  Score=41.46  Aligned_cols=64  Identities=13%  Similarity=0.279  Sum_probs=46.6

Q ss_pred             cccceeEeeeeecccc----c---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEe
Q 035170            3 LLNERTLKGTFFGNYK----P---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIR   68 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~----~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~   68 (71)
                      +.++.++.|+..+...    +   ...+..+++++.+|.+++.  +++.|+++|+.+|++.+.++. ..|++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         253 IFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             hhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            4567888887643211    0   1357889999999988753  478899999999999887754 4688763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.47  E-value=0.00048  Score=41.15  Aligned_cols=59  Identities=19%  Similarity=0.357  Sum_probs=44.8

Q ss_pred             cceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            5 NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         5 ~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      ++.++.|+.  .+. ..++.++++++.+|.++  +++++.|+++++++||+.+.++.. +|++++
T Consensus       273 ~~~~~~~~~--~~~-~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         273 KEIRIIGSI--SAT-KADVEEALKLVKEGKIK--PVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             CCcEEEEec--CCC-HHHHHHHHHHHHcCCCc--cceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            456666665  222 25688899999999875  467889999999999999887664 687763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=97.45  E-value=0.0005  Score=41.74  Aligned_cols=61  Identities=21%  Similarity=0.380  Sum_probs=47.0

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      ++++++.|++.+  .+ +++.++++++++|.+++  .....++++++++|++.+.+++. +|+++++
T Consensus       289 ~~~~~i~~~~~~--~~-~~~~~~~~ll~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         289 LRALTIQGSYVG--SL-EELRELVALAKAGKLKP--IPLTERPLSDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             hcCcEEEEcccC--CH-HHHHHHHHHHHcCCCcc--ceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence            367788887732  22 56889999999998865  35568999999999999887654 7888753

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=97.42  E-value=0.00054  Score=40.84  Aligned_cols=64  Identities=11%  Similarity=0.053  Sum_probs=46.3

Q ss_pred             ccceeEeeeeeccccc---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            4 LNERTLKGTFFGNYKP---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .+++++.++......+   ...+.++++++.++.++  +++++.++++++++|++.+.++.. +|+++.|
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         257 RRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLV--PVVGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             hCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCcc--CccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            4567777766322111   13467788899999875  457789999999999999887654 6988764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=97.40  E-value=0.00058  Score=41.15  Aligned_cols=59  Identities=20%  Similarity=0.304  Sum_probs=45.2

Q ss_pred             cceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            5 NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         5 ~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      ++.++.|++.+  .. .++.++++++.+|.+++  .++ .++++++++||+.+.++.. +|+++.+
T Consensus       277 ~~~~~~~~~~~--~~-~~~~~~~~l~~~g~l~~--~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        277 DGIEVVGSLVG--TR-QDLEEAFQFGAEGKVVP--KVQ-LRPLEDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             cCcEEEEecCC--CH-HHHHHHHHHHHhCCCCc--cEE-EEcHHHHHHHHHHHHcCCccceEEEec
Confidence            56777776632  22 56889999999998754  465 6899999999999888664 7888865

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=97.39  E-value=0.00079  Score=40.44  Aligned_cols=59  Identities=25%  Similarity=0.537  Sum_probs=46.2

Q ss_pred             cceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEE
Q 035170            5 NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCII   67 (71)
Q Consensus         5 ~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi   67 (71)
                      +++++.+++..    ...+.++++++.++.+++.++++..+++++++++++.+.....+|+++
T Consensus       275 ~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi  333 (334)
T cd08234         275 KELTIIGSFIN----PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRSGGALKVVV  333 (334)
T ss_pred             CCcEEEEeccC----HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhcCCceEEEe
Confidence            56677776521    256889999999999887666788999999999999988743478876

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=97.38  E-value=0.0011  Score=40.00  Aligned_cols=62  Identities=29%  Similarity=0.522  Sum_probs=46.9

Q ss_pred             cceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc--eeeEEEee
Q 035170            5 NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE--GLRCIIRM   69 (71)
Q Consensus         5 ~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~--~~kvvi~~   69 (71)
                      +++++.++.  ... ...+.++++++.+|.+++.+.+...+++++++++++.+.+++  ..|+++++
T Consensus       274 ~~~~~~~~~--~~~-~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         274 KELTILGSR--NAT-REDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             CCCEEEEec--cCC-hhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            456666654  222 257889999999999876445677999999999999998763  47998864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.37  E-value=0.00067  Score=41.02  Aligned_cols=46  Identities=17%  Similarity=0.263  Sum_probs=36.3

Q ss_pred             CHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170           22 DLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus        22 ~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .+.++++++.+|.+++.  +...++|+++++||+.+.+++. +|+++.+
T Consensus       299 ~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         299 AIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            35677789999998764  3445699999999999988764 7998864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.36  E-value=0.00087  Score=40.03  Aligned_cols=61  Identities=25%  Similarity=0.479  Sum_probs=47.3

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      +.+++++.|+..+.   ...+.++++++.++.+++  +.++.+++++++++++.+.++.. .|++++
T Consensus       274 ~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         274 LTKGATLRGIAVGS---RAQFEAMNRAIEAHRIRP--VIDRVFPFEEAKEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             hhcceEEEEEecCc---HHHHHHHHHHHHcCCccc--ccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence            45788888887442   257889999999887754  46789999999999999887654 688775

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=97.33  E-value=0.00071  Score=40.61  Aligned_cols=58  Identities=17%  Similarity=0.207  Sum_probs=42.8

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEE
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCII   67 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi   67 (71)
                      .++..+.|+..  .. ...+.++++++.++.+++  . ++.|+++++++||+.+.+++. +|+++
T Consensus       271 ~~~~~i~~~~~--~~-~~~~~~~~~l~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         271 WGEKTIRSVAN--LT-RQDGEEFLKLAAEIPIKP--E-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             hCceEEEEecC--CC-HHHHHHHHHHHHcCCCCc--e-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            34566777662  22 256888999999998765  3 578999999999999888654 67663

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.33  E-value=0.00056  Score=41.28  Aligned_cols=47  Identities=15%  Similarity=0.194  Sum_probs=39.7

Q ss_pred             CHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeec
Q 035170           22 DLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus        22 ~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      .-.+++.++.+|.+++  -|.|.|||+++.+|..++.++.. +|+++.+.
T Consensus       284 ~v~rl~alvnsg~lk~--~I~~~ypls~vadA~~diesrktvGkvlLlp~  331 (336)
T KOG1197|consen  284 YVARLFALVNSGHLKI--HIDHVYPLSKVADAHADIESRKTVGKVLLLPG  331 (336)
T ss_pred             HHHHHHHHhhcCccce--eeeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence            3467778899998866  58899999999999999999764 89999874

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=97.31  E-value=0.0012  Score=39.87  Aligned_cols=64  Identities=23%  Similarity=0.411  Sum_probs=47.4

Q ss_pred             ccceeEeeeeecccc--cCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhc-Cc-eeeEEE
Q 035170            4 LNERTLKGTFFGNYK--PRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLR-GE-GLRCII   67 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~--~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~-~~-~~kvvi   67 (71)
                      .++.++.|++.....  ....+.++++++.++.+++.+.+...++++++.++++.+.+ +. ..|+++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         276 RKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             hcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            567888887643211  13568889999999988755567789999999999999887 43 367764

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=97.12  E-value=0.002  Score=38.96  Aligned_cols=60  Identities=28%  Similarity=0.479  Sum_probs=45.6

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .+++++.|...+  . ..++.++++++.++.+++  .+ +.|++++++++|+.+..+.. +|+++++
T Consensus       281 ~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         281 LRGITIVGSLVG--T-RQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             hcccEEEEeccC--C-HHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            467777776522  1 267889999999998864  44 57999999999999887664 7888864

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=97.10  E-value=0.0007  Score=40.58  Aligned_cols=65  Identities=17%  Similarity=0.331  Sum_probs=45.4

Q ss_pred             ccceeEeeeeecccc--cCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            4 LNERTLKGTFFGNYK--PRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~--~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      .++.++.++......  ....+.++++++.+|.+++....++.++++++++|++.+..+.. +|++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         262 AKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             hcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            456777776532110  11346788899999988764445567999999999999887654 688763

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=97.10  E-value=0.0026  Score=37.94  Aligned_cols=61  Identities=16%  Similarity=0.224  Sum_probs=39.9

Q ss_pred             ccceeEeeeeecccccCCCHHHH----HHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSV----VEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~----i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      .+++++.++..+...+ .....+    .+++..+.   .+.+.+.|+++|++++++.+.+++. +|++++
T Consensus       259 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  324 (325)
T cd05280         259 LRGVSLLGIDSVNCPM-ELRKQVWQKLATEWKPDL---LEIVVREISLEELPEAIDRLLAGKHRGRTVVK  324 (325)
T ss_pred             eeeeEEEEEEeecCch-hHHHHHHHHHHHHHhcCC---ccceeeEecHHHHHHHHHHHhcCCcceEEEEe
Confidence            5788888876432221 223333    33444552   2346789999999999999887764 788875

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.08  E-value=0.0018  Score=40.12  Aligned_cols=48  Identities=21%  Similarity=0.357  Sum_probs=40.2

Q ss_pred             CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEeec
Q 035170           21 SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRME   70 (71)
Q Consensus        21 ~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~~   70 (71)
                      +....+.++++.|++  .+.+.+.||++++.+|++.+.... .+|+++.+.
T Consensus       298 ~~l~~l~~~ie~gki--kp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  298 EYLKALVELIEKGKI--KPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             HHHHHHHHHHHcCcc--cCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            567888899999965  668899999999999999987754 489998764

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=97.01  E-value=0.0022  Score=38.23  Aligned_cols=62  Identities=10%  Similarity=0.215  Sum_probs=45.5

Q ss_pred             cceeEeeeeecccc----c---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            5 NERTLKGTFFGNYK----P---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         5 ~~~~i~Gs~~g~~~----~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      ++.++.+...+.+.    +   .+.+.++++++.+|.+++  .+++.|+++++.+||+.+.++.. .|++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         254 KDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTT--PVGAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             cCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCccc--CccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            67888887744321    1   124777889999998764  46789999999999999887654 687763

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=96.99  E-value=0.0031  Score=37.71  Aligned_cols=64  Identities=11%  Similarity=0.195  Sum_probs=44.6

Q ss_pred             cceeEeeeeecccccC-------CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeec
Q 035170            5 NERTLKGTFFGNYKPR-------SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         5 ~~~~i~Gs~~g~~~~~-------~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      +.+++.|+..+.....       ..+.++++++.++.+++  ++++.+++++++++++.+..+.. +|+++.+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~  329 (334)
T PTZ00354        258 KRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN  329 (334)
T ss_pred             hCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence            4557777763321100       12366788899998754  57789999999999998887654 79998763

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=96.95  E-value=0.002  Score=38.70  Aligned_cols=58  Identities=22%  Similarity=0.511  Sum_probs=43.4

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEE
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCII   67 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi   67 (71)
                      .++.++.|++.+.   ...+.++++++.++.+++   ..+.++++++.++|+.+.++.. .|+++
T Consensus       272 ~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         272 MKRQSIAGSTHGG---RADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             hCCCEEEEeccCC---HHHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            3567777777432   256888999999998864   3468999999999999887654 57654

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.92  E-value=0.0022  Score=37.98  Aligned_cols=61  Identities=21%  Similarity=0.328  Sum_probs=42.6

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEE
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCII   67 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi   67 (71)
                      .+++++.++..... ....+..+++++.++.+++  +.++.++++|+++|++.+.++.. .|+++
T Consensus       258 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         258 GVNLTLTGSSSGDV-PQTPLQELFDFVAAGHLDI--PPSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             ccceEEEecchhhh-hHHHHHHHHHHHHCCceec--ccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            34566666542111 1134778889999998754  46789999999999999887654 67765

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=96.89  E-value=0.0022  Score=37.68  Aligned_cols=45  Identities=27%  Similarity=0.566  Sum_probs=37.1

Q ss_pred             CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcC--ceeeEEE
Q 035170           21 SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG--EGLRCII   67 (71)
Q Consensus        21 ~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~--~~~kvvi   67 (71)
                      ..+.++++++.++.++  +++.+.++++++++||+.+..+  ..+|+++
T Consensus       231 ~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         231 RNLEEALDLLAEGRLE--ALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             ccHHHHHHHHHcCCcc--ccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence            4688999999999864  4577899999999999998876  4578764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.71  E-value=0.002  Score=38.57  Aligned_cols=63  Identities=13%  Similarity=0.221  Sum_probs=43.4

Q ss_pred             cccceeEeeeeeccccc--CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEE
Q 035170            3 LLNERTLKGTFFGNYKP--RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCII   67 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~--~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi   67 (71)
                      +.++.++.|+.......  .+.+.++++++.+|.+++.+.  ..+++++++++++.+.+++. .|+++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~--~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         264 ITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRED--VVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             hhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccccc--ccccHHHHHHHHHHHhcCCCccceeC
Confidence            34677778766322110  134677889999999876544  45899999999999887654 57653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=96.71  E-value=0.0069  Score=37.22  Aligned_cols=67  Identities=18%  Similarity=0.316  Sum_probs=47.5

Q ss_pred             CcccceeEeeeeecccccC--------CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcC--ceeeEEEeec
Q 035170            2 NLLNERTLKGTFFGNYKPR--------SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG--EGLRCIIRME   70 (71)
Q Consensus         2 ~~~~~~~i~Gs~~g~~~~~--------~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~--~~~kvvi~~~   70 (71)
                      +++|++.++|.|++.|...        ..+.++.+++..|++..  .-....||+|...|++.....  ...|-++.++
T Consensus       277 lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~--~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e  353 (354)
T KOG0025|consen  277 LIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKA--PNCEKVPLADHKTALDAALSKFGKSGKQIIVLE  353 (354)
T ss_pred             heeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecc--ccceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence            5789999999998766421        23567778999998854  233578999999998876553  2356666553

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=96.63  E-value=0.0061  Score=36.78  Aligned_cols=64  Identities=22%  Similarity=0.432  Sum_probs=45.7

Q ss_pred             cccceeEeeeeeccc----ccC---CCHHHHHHHHHcCCCccccceeeee---ehhhHHHHHHHHhcCce-eeEEEe
Q 035170            3 LLNERTLKGTFFGNY----KPR---SDLPSVVEKYMSKELEVEKFITHTV---PFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~----~~~---~~~~~~i~l~~~g~~~~~~~it~~~---~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      +.++.++.++..+..    .+.   ..+..+++++.+|.+++.  ..+.+   +++++.++++.+.++.. +|+++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~  340 (341)
T cd08290         266 IFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLV  340 (341)
T ss_pred             hhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEe
Confidence            457888888774321    110   247788899999988654  44456   99999999999877654 688875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=96.62  E-value=0.0055  Score=37.27  Aligned_cols=45  Identities=18%  Similarity=0.292  Sum_probs=36.8

Q ss_pred             CHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170           22 DLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus        22 ~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      .+..+++++.+|.++  ++.++.++++++++||+.+..++. +|++++
T Consensus       306 ~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  351 (352)
T cd08247         306 WIEKCAELIADGKVK--PPIDSVYPFEDYKEAFERLKSNRAKGKVVIK  351 (352)
T ss_pred             HHHHHHHHHhCCCeE--eeeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence            467788899999775  457789999999999999887664 788875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.55  E-value=0.0091  Score=35.13  Aligned_cols=45  Identities=13%  Similarity=0.158  Sum_probs=35.8

Q ss_pred             HHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170           23 LPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus        23 ~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.++++++.++.+++  ..++.|++++++++|+.+..+.. .|+++.|
T Consensus       275 ~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         275 AAELFDAVASGKLKV--EIGKRYPLADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             HHHHHHHHHCCCCcC--cccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            456778888998765  46789999999999999887654 6888764

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.40  E-value=0.011  Score=35.37  Aligned_cols=45  Identities=18%  Similarity=0.352  Sum_probs=36.2

Q ss_pred             CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEE
Q 035170           21 SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCII   67 (71)
Q Consensus        21 ~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi   67 (71)
                      ..+.++++++.+|.+++  ++++.+++++++++|+.+..+.. +|+++
T Consensus       285 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         285 QDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            45778889999998754  57789999999999998877654 67765

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=96.38  E-value=0.022  Score=34.06  Aligned_cols=62  Identities=23%  Similarity=0.254  Sum_probs=42.9

Q ss_pred             ccceeEeeeeeccccc---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            4 LNERTLKGTFFGNYKP---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      .++.++.|+.......   ...+..+.+++..+.+++   +++.++++++++||+.+..++. .|++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~  323 (324)
T cd08288         258 LRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVD  323 (324)
T ss_pred             ccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEe
Confidence            5788888865222211   123555667777887643   3689999999999999887764 688875

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.37  E-value=0.014  Score=34.40  Aligned_cols=62  Identities=13%  Similarity=0.401  Sum_probs=43.9

Q ss_pred             ccceeEeeeeeccccc------CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEE
Q 035170            4 LNERTLKGTFFGNYKP------RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCII   67 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~------~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi   67 (71)
                      .+++++.|...+.+..      ...+.++++++.++.++  ++.++.|+++++.++|+.+..+.. .|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv  322 (323)
T cd08241         254 LKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR--PHVSAVFPLEQAAEALRALADRKATGKVVL  322 (323)
T ss_pred             hcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcc--cccceEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            4677788876432211      13456788899999774  457889999999999998776553 67765

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=96.34  E-value=0.01  Score=35.91  Aligned_cols=45  Identities=22%  Similarity=0.400  Sum_probs=36.7

Q ss_pred             CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEE
Q 035170           21 SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCII   67 (71)
Q Consensus        21 ~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi   67 (71)
                      ..+.++++++.+|.++  +++++.|++++++++|+.+.++.. .|+++
T Consensus       304 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  349 (350)
T cd08248         304 SALDELAKLVEDGKIK--PVIDKVFPFEEVPEAYEKVESGHARGKTVI  349 (350)
T ss_pred             HHHHHHHHHHhCCCEe--cccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence            4578899999999875  457889999999999999877653 57775

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.32  E-value=0.017  Score=34.50  Aligned_cols=64  Identities=13%  Similarity=0.244  Sum_probs=44.1

Q ss_pred             ccceeEeeeeecccccC-----CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            4 LNERTLKGTFFGNYKPR-----SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~-----~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .+++++.++..+.....     ..+.++++++.++.+++  +.++.|++++++++++.+.++.. +|+++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         268 SENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP--KIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             hcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC--ceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            45667777653311100     12567888888997654  56789999999999999887654 6888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.30  E-value=0.025  Score=33.86  Aligned_cols=64  Identities=17%  Similarity=0.239  Sum_probs=39.9

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCcc---ccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEV---EKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~---~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .+++++.|+.... .+.....++++.+.. .+.+   .+.+++.++++++.+||+.+.+++. +|+++++
T Consensus       259 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         259 LRGVNLLGIDSVE-CPMELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             hccceEEEEEeEe-cCchHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            5678888875211 111223444444432 2221   2356889999999999999888764 6888763

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=96.23  E-value=0.0097  Score=35.68  Aligned_cols=55  Identities=16%  Similarity=0.148  Sum_probs=39.0

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeE
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRC   65 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kv   65 (71)
                      .++.++.|++.|  .+ +++.++++++....    ..++++||++|+++|++.+.++.. .|+
T Consensus       269 ~~~~~~~~~~~~--~~-~~~~~~~~l~~~~~----~~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         269 SKQISIIGSTGG--TR-KELLELVKIAKDLK----VKVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             hcCcEEEEccCC--CH-HHHHHHHHHHHcCC----ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence            356677777633  22 67889999996443    246789999999999998877553 343

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=96.20  E-value=0.01  Score=34.88  Aligned_cols=44  Identities=16%  Similarity=0.306  Sum_probs=35.6

Q ss_pred             CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEE
Q 035170           21 SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCI   66 (71)
Q Consensus        21 ~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvv   66 (71)
                      ..+.++++++.++.++  +++++.|++++++++|+.+..+.. .|++
T Consensus       264 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv  308 (309)
T cd05289         264 EQLAELAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHARGKVV  308 (309)
T ss_pred             HHHHHHHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence            5688899999999764  467899999999999998877653 5665

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.19  E-value=0.026  Score=33.25  Aligned_cols=62  Identities=18%  Similarity=0.179  Sum_probs=42.6

Q ss_pred             ccceeEeeeeecccccC-------CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEE
Q 035170            4 LNERTLKGTFFGNYKPR-------SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCII   67 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~-------~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi   67 (71)
                      .+++++.|+..+.....       ..+.++++++.++.+++  +.++.|++++++++++.+.++.. .|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         254 RKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             HhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            46788888764321000       12456778888898754  57789999999999999877653 57653

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.13  E-value=0.02  Score=33.94  Aligned_cols=46  Identities=17%  Similarity=0.224  Sum_probs=36.1

Q ss_pred             CHHHHHHHHHcCCCcccccee-eeeehhhHHHHHHHHhcCc-eeeEEEee
Q 035170           22 DLPSVVEKYMSKELEVEKFIT-HTVPFSEINKAFEYMLRGE-GLRCIIRM   69 (71)
Q Consensus        22 ~~~~~i~l~~~g~~~~~~~it-~~~~l~~~~~a~~~~~~~~-~~kvvi~~   69 (71)
                      .+..+++++.++.++  ++++ +.|++++++++++.+..+. ..|+++++
T Consensus       279 ~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         279 ILREAARLVERGQLR--PLLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHHHHHHHHCCCcc--cccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            467788888899764  4556 8999999999999987755 46888753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=96.12  E-value=0.019  Score=34.86  Aligned_cols=45  Identities=11%  Similarity=0.211  Sum_probs=35.4

Q ss_pred             CHHHHHHHHHcCCCccccceeeeee--hhhHHHHHHHHhcCc-e-eeEEEe
Q 035170           22 DLPSVVEKYMSKELEVEKFITHTVP--FSEINKAFEYMLRGE-G-LRCIIR   68 (71)
Q Consensus        22 ~~~~~i~l~~~g~~~~~~~it~~~~--l~~~~~a~~~~~~~~-~-~kvvi~   68 (71)
                      .+..+++++.++++++.++.  .++  ++++++||+.+..++ . .|++++
T Consensus       290 ~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~kvvv~  338 (339)
T cd08249         290 FWKYLPELLEEGKLKPHPVR--VVEGGLEGVQEGLDLLRKGKVSGEKLVVR  338 (339)
T ss_pred             HHHHHHHHHHcCCccCCCce--ecCCcHHHHHHHHHHHHCCCccceEEEEe
Confidence            46678889999988775333  456  999999999988876 4 798876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.95  E-value=0.01  Score=36.56  Aligned_cols=66  Identities=12%  Similarity=0.170  Sum_probs=46.9

Q ss_pred             cccceeEeeeee-cccc--cCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEeec
Q 035170            3 LLNERTLKGTFF-GNYK--PRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~-g~~~--~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~~   70 (71)
                      +.+.++++|... ..+.  +.+-.+++..++++|+++.+.  |-.-.|+.+++||.-+-+|+ .+|.++++.
T Consensus       270 ~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~  339 (340)
T COG2130         270 MAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVA  339 (340)
T ss_pred             HhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEec
Confidence            446788888774 2221  113456777899999998754  33346999999999888876 489999875

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=95.91  E-value=0.013  Score=42.17  Aligned_cols=67  Identities=15%  Similarity=0.225  Sum_probs=48.7

Q ss_pred             cccceeEeeeeecccc--cCCCHHHHHHHHHcCCC--ccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYK--PRSDLPSVVEKYMSKEL--EVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~--~~~~~~~~i~l~~~g~~--~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.++.++.|...-+..  -.++|.++..++++|-=  -+.|+-++.|+=+++++||+.|.+|+. +|||+..
T Consensus      1670 fLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1670 FLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             hhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence            5678888886632211  12567777777766521  136688999999999999999999987 7999975

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.86  E-value=0.021  Score=33.85  Aligned_cols=44  Identities=18%  Similarity=0.335  Sum_probs=35.8

Q ss_pred             CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEE
Q 035170           21 SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCI   66 (71)
Q Consensus        21 ~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvv   66 (71)
                      ..+.++++++.++.++  +++++.|++++++++|+.+.++.. .|++
T Consensus       274 ~~~~~~~~~l~~~~~~--~~~~~~~~~~~i~~a~~~~~~~~~~~~vv  318 (319)
T cd08267         274 EDLEQLAELVEEGKLK--PVIDSVYPLEDAPEAYRRLKSGRARGKVV  318 (319)
T ss_pred             HHHHHHHHHHHCCCee--eeeeeEEcHHHHHHHHHHHhcCCCCCcEe
Confidence            5688899999999875  467889999999999999887653 5665

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=95.84  E-value=0.075  Score=31.82  Aligned_cols=61  Identities=20%  Similarity=0.265  Sum_probs=40.9

Q ss_pred             ccceeEeeeeecccccCC----CHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            4 LNERTLKGTFFGNYKPRS----DLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~----~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      .+++++.|+...... ..    .+..+.+++..+.+++  + .+.++++++++|++.+..++. +|++++
T Consensus       257 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~  322 (323)
T TIGR02823       257 LRGVSLLGIDSVYCP-MALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVD  322 (323)
T ss_pred             hcceEEEEEeccccC-chhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEe
Confidence            567888886532111 11    2445556666776643  4 468999999999999887664 688875

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=95.81  E-value=0.056  Score=32.49  Aligned_cols=64  Identities=9%  Similarity=0.079  Sum_probs=42.6

Q ss_pred             ccceeEeeeeecccc--cC-------CCHHHHHHHHHcCCCccccce-eeeeehhhHHHHHHHHhcCce-eeEEE
Q 035170            4 LNERTLKGTFFGNYK--PR-------SDLPSVVEKYMSKELEVEKFI-THTVPFSEINKAFEYMLRGEG-LRCII   67 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~--~~-------~~~~~~i~l~~~g~~~~~~~i-t~~~~l~~~~~a~~~~~~~~~-~kvvi   67 (71)
                      .+++++.+++.+...  ..       ..+.++++++.+|.+++.... .+.++++++++|++.+.++.. .|+++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  335 (336)
T cd08252         261 SKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVL  335 (336)
T ss_pred             cccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEe
Confidence            467788876633210  00       236678899999988652111 135799999999999887664 67775

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08251 polyketide_synthase polyketide synthase

Probab=95.71  E-value=0.03  Score=32.85  Aligned_cols=44  Identities=20%  Similarity=0.387  Sum_probs=34.3

Q ss_pred             CHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEE
Q 035170           22 DLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCII   67 (71)
Q Consensus        22 ~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi   67 (71)
                      .+.++++++.+|.+++  +.++.|++++++++++.+.++.. +|+++
T Consensus       259 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         259 YQAEMVSLVEEGELRP--TVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             HHHHHHHHHHCCCccC--CCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            3666788888998754  56789999999999999887654 57653

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.64  E-value=0.04  Score=32.74  Aligned_cols=45  Identities=13%  Similarity=0.298  Sum_probs=35.5

Q ss_pred             HHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170           23 LPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus        23 ~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.++++++.++.+++  +.++.++++++.++++.+..+.. .|+++++
T Consensus       280 ~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         280 GEELLELLAAGKLEP--LVIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHHHHHHHCCCeee--ccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            466788898998754  45688999999999999887654 6888753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=95.43  E-value=0.057  Score=31.85  Aligned_cols=64  Identities=16%  Similarity=0.269  Sum_probs=41.2

Q ss_pred             ccceeEeeeeeccccc---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            4 LNERTLKGTFFGNYKP---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .++.++.+.......+   ...+..+.+++.++.+++  ..++.+++++++++++.+.++.. +|+++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         258 AKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             hcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            3455666654222111   012445556777887654  56789999999999999887654 6888753

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>smart00829 PKS_ER Enoylreductase

Probab=95.38  E-value=0.047  Score=31.63  Aligned_cols=43  Identities=26%  Similarity=0.452  Sum_probs=33.4

Q ss_pred             CHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEE
Q 035170           22 DLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCI   66 (71)
Q Consensus        22 ~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvv   66 (71)
                      .+..+++++.++.+++  ...+.|++++++++++.+..+.. .|++
T Consensus       244 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~iv  287 (288)
T smart00829      244 LLAEVLELFAEGVLRP--LPVTVFPISDVEDAFRYMQQGKHIGKVV  287 (288)
T ss_pred             HHHHHHHHHHCCCccC--cCceEEcHHHHHHHHHHHhcCCCcceEe
Confidence            3567888888998765  34578999999999999887654 5665

Enoylreductase in Polyketide synthases.

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=95.07  E-value=0.055  Score=31.31  Aligned_cols=44  Identities=23%  Similarity=0.254  Sum_probs=34.7

Q ss_pred             CHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEE
Q 035170           22 DLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCII   67 (71)
Q Consensus        22 ~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi   67 (71)
                      .+..+++++.++.++  +++++.+++++++++|+.+.++.. .|+++
T Consensus       249 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         249 LLREVLELLEAGVLK--PLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             HHHHHHHHHHCCCcc--cCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            467788899999774  567888999999999999887654 56653

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=95.00  E-value=0.067  Score=32.19  Aligned_cols=45  Identities=11%  Similarity=0.174  Sum_probs=34.1

Q ss_pred             CHHHHHHHHHcCCCccccceeeeee---hhhHHHHHHHHhcCce-eeEEEe
Q 035170           22 DLPSVVEKYMSKELEVEKFITHTVP---FSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus        22 ~~~~~i~l~~~g~~~~~~~it~~~~---l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      .+.++++++.+|.+++  .+++.++   ++++++|++.+.+++. +|+++.
T Consensus       286 ~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       286 LLNRVARLVDAGKIRT--TLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHHHHHHHCCCeec--cchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            3678889999998754  4555554   7899999999888764 687764

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=94.90  E-value=0.099  Score=30.90  Aligned_cols=63  Identities=14%  Similarity=0.166  Sum_probs=43.3

Q ss_pred             ccceeEeeeeeccccc-------CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEe
Q 035170            4 LNERTLKGTFFGNYKP-------RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIR   68 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~-------~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~   68 (71)
                      .+++++.|+.......       ...+.++++++.++.++  ++.++.+++++++++++.+.++.. .|++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  324 (325)
T TIGR02824       254 AKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVR--PVIDKVFPLEDAAQAHALMESGDHIGKIVLT  324 (325)
T ss_pred             hcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCccc--CccccEEeHHHHHHHHHHHHhCCCcceEEEe
Confidence            5678888876332110       01235567788888765  357789999999999999887654 688765

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.39  E-value=0.16  Score=30.02  Aligned_cols=64  Identities=19%  Similarity=0.386  Sum_probs=40.3

Q ss_pred             cccceeEeeeeeccc--ccCCC----HHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNY--KPRSD----LPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~--~~~~~----~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.+++++.+...+..  .+ ..    +..+.+++.++.+++  +.++.|+++++.++++.+.++.. .|+++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         258 LKKSLTFRGYSLDEITLDP-EARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             hhcCCEEEEEecccccCCH-HHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            345666666542211  01 22    333445566776654  56788999999999999887654 6888753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=91.39  E-value=0.4  Score=29.87  Aligned_cols=64  Identities=8%  Similarity=0.137  Sum_probs=43.3

Q ss_pred             cccceeEeeeeecccccCCCH----HHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDL----PSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~----~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~~   70 (71)
                      +.|++++.|...-.+  .+.+    +.+..++++|+|+...-|.  -.|+..+.||-.+-+|+ .+|.++.+.
T Consensus       273 i~Kr~~iqgflv~d~--~d~~~k~ld~l~~~ikegKI~y~edi~--~Glen~P~A~vglf~GkNvGKqiv~va  341 (343)
T KOG1196|consen  273 IYKRIRIQGFLVSDY--LDKYPKFLDFLLPYIKEGKITYVEDIA--DGLENGPSALVGLFHGKNVGKQLVKVA  341 (343)
T ss_pred             eeeeEEeeeEEeech--hhhhHHHHHHHHHHHhcCceEEehhHH--HHHhccHHHHHHHhccCcccceEEEee
Confidence            568888988552222  2344    4445677899987643332  24899999999888876 479888764

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=90.69  E-value=0.15  Score=26.70  Aligned_cols=26  Identities=23%  Similarity=0.556  Sum_probs=19.6

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHH
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYM   31 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~   31 (71)
                      +.++++++|++.+  ++ +++++++++++
T Consensus       104 ~~~~~~i~g~~~~--~~-~~~~~~~~~la  129 (130)
T PF00107_consen  104 MFKEITIRGSWGG--SP-EDFQEALQLLA  129 (130)
T ss_dssp             HHTTEEEEEESSG--GH-HHHHHHHHHHH
T ss_pred             HhCCcEEEEEccC--CH-HHHHHHHHHhc
Confidence            4678999999844  33 77888888876

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=90.67  E-value=0.27  Score=29.57  Aligned_cols=27  Identities=11%  Similarity=0.081  Sum_probs=19.2

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcC
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSK   33 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g   33 (71)
                      +++++++|+++|+   +.+++++++++++|
T Consensus       280 ~~~~~i~g~~~~~---~~~~~~~~~~~~~~  306 (306)
T cd08258         280 QKELSVIGSRSST---PASWETALRLLASG  306 (306)
T ss_pred             hcCcEEEEEecCc---hHhHHHHHHHHhcC
Confidence            4778888888543   25688888887765

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>PF07109 Mg-por_mtran_C: Magnesium-protoporphyrin IX methyltransferase C-terminus; InterPro: IPR010940 This entry represents the C terminus (approximately 100 residues) of bacterial and eukaryotic Magnesium-protoporphyrin IX methyltransferase (2

Probab=85.27  E-value=1.3  Score=22.93  Aligned_cols=26  Identities=8%  Similarity=0.078  Sum_probs=20.2

Q ss_pred             eeehhhHHHHHHHHhcCceeeEEEee
Q 035170           44 TVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus        44 ~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      +||-+|+.+++..+.+....++++.+
T Consensus         7 HYp~~d~~~~l~~La~~t~~~~ifTf   32 (97)
T PF07109_consen    7 HYPAEDAAQMLAHLASRTRGSLIFTF   32 (97)
T ss_pred             ccCHHHHHHHHHHHHHhccCcEEEEE
Confidence            68888888888888776666777765

1.1.11 from EC). This converts magnesium-protoporphyrin IX to magnesium-protoporphyrin IX metylester using S-adenosyl-L-methionine as a cofactor [].; GO: 0046406 magnesium protoporphyrin IX methyltransferase activity, 0015979 photosynthesis, 0015995 chlorophyll biosynthetic process

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	71
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		3e-14
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		4e-14
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		5e-14
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		5e-14
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		5e-14
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		5e-14
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		2e-11
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		2e-11
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		2e-11
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		2e-11
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		2e-11
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		2e-11
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		2e-11
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		2e-11
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		2e-11
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		2e-11
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		6e-11
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		6e-11
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		7e-11
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		8e-11
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		8e-11
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-10
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-10
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-10
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		6e-10
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		7e-10
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		9e-10
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		2e-09
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		2e-09
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		4e-09
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		7e-07

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           L+  R  KGT FG +K R+ +P +VEKYM+KE++V+++ITH +   EINKAF+ +  G  
Sbjct: 310 LVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTC 369
Query: 63  LRCII 67
           LRC++
Sbjct: 370 LRCVL 374

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/67 (46%), Positives = 49/67 (73%)
Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           L+  R  KGT FG +K RS +PS+V+KY+ KE++V+++ITH +  ++INKAF+ M  G+ 
Sbjct: 328 LVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLADINKAFDLMHDGDC 387
Query: 63  LRCIIRM 69
           LR ++ M
Sbjct: 388 LRVVLDM 394

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/67 (44%), Positives = 48/67 (71%)
Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           L+  RT KGT FG +K    +P +V +YMSK+++V++F+TH + F EINKAFE M  G+ 
Sbjct: 307 LVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS 366
Query: 63  LRCIIRM 69
           +R ++++
Sbjct: 367 IRTVVKI 373

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/67 (44%), Positives = 48/67 (71%)
Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           L+  RT KGT FG +K    +P +V +YMSK+++V++F+TH + F EINKAFE M  G+ 
Sbjct: 308 LVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS 367
Query: 63  LRCIIRM 69
           +R ++++
Sbjct: 368 IRTVVKI 374

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/67 (44%), Positives = 48/67 (71%)
Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           L+  RT KGT FG +K    +P +V +YMSK+++V++F+TH + F EINKAFE M  G+ 
Sbjct: 307 LVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS 366
Query: 63  LRCIIRM 69
           +R ++++
Sbjct: 367 IRTVVKI 373

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/67 (44%), Positives = 48/67 (71%)
Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           L+  RT KGT FG +K    +P +V +YMSK+++V++F+TH + F EINKAFE M  G+ 
Sbjct: 308 LVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS 367
Query: 63  LRCIIRM 69
           +R ++++
Sbjct: 368 IRTVVKI 374

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL+ RT KG  FG +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSG 365
Query: 61  EGLRCII 67
           E +R I+
Sbjct: 366 ESIRTIL 372

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL+ RT KG  FG +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSG 365
Query: 61  EGLRCII 67
           E +R I+
Sbjct: 366 ESIRTIL 372

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL+ RT KG  FG +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSG 365
Query: 61  EGLRCII 67
           E +R I+
Sbjct: 366 ESIRTIL 372

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL+ RT KG  FG +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSG 365
Query: 61  EGLRCII 67
           E +R I+
Sbjct: 366 ESIRTIL 372

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL+ RT KG  FG +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSG 365
Query: 61  EGLRCII 67
           E +R I+
Sbjct: 366 ESIRTIL 372

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL+ RT KG  FG +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSG 365
Query: 61  EGLRCII 67
           E +R I+
Sbjct: 366 ESIRTIL 372

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL+ RT KG  FG +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSG 365
Query: 61  EGLRCII 67
           E +R I+
Sbjct: 366 ESIRTIL 372

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL+ RT KG  FG +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSG 365
Query: 61  EGLRCII 67
           E +R I+
Sbjct: 366 ESIRTIL 372

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL+ RT KG  FG +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSG 365
Query: 61  EGLRCII 67
           E +R I+
Sbjct: 366 ESIRTIL 372

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL+ RT KG  FG +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSG 365
Query: 61  EGLRCII 67
           E +R I+
Sbjct: 366 ESIRTIL 372

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL+ RT KG  FG +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 305 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSG 364
Query: 61  EGLRCII 67
           + +R I+
Sbjct: 365 KSIRTIL 371

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL+ RT KG  FG +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 305 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSG 364
Query: 61  EGLRCII 67
           + +R I+
Sbjct: 365 KSIRTIL 371

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 44/65 (67%)
Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           L+  RT+ GTFFG +K    +P +V  Y +K+  ++  +THT+PF +I++AF+ M +G+ 
Sbjct: 315 LIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKISEAFDLMNQGKS 374
Query: 63  LRCII 67
           +R I+
Sbjct: 375 IRTIL 379

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 44/67 (65%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M L   RT KG  FG  K R D+P +V ++++K+ ++++ ITH +PF +I++ FE +  G
Sbjct: 305 MLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSG 364
Query: 61  EGLRCII 67
           + +R ++
Sbjct: 365 QSIRTVL 371

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 44/67 (65%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M L   RT KG  FG  K R D+P +V ++++K+ ++++ ITH +PF +I++ FE +  G
Sbjct: 305 MLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSG 364
Query: 61  EGLRCII 67
           + +R ++
Sbjct: 365 QSIRTVL 371

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL  RT KG  +G +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSG 365
Query: 61  EGLRCII 67
           + +R ++
Sbjct: 366 KSIRTVL 372

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL  RT KG  +G +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSG 365
Query: 61  EGLRCII 67
           + +R ++
Sbjct: 366 KSIRTVL 372

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL  RT KG  +G +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSG 365
Query: 61  EGLRCII 67
           + +R ++
Sbjct: 366 KSIRTVL 372

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL  RT KG  FG +K +  +P +V  +M+K+  ++  IT+ +PF +IN+ F+ +  G
Sbjct: 306 MLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPFEKINEGFDLLRSG 365
Query: 61  EGLRCII 67
           + +R ++
Sbjct: 366 KSIRTVL 372

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 45/69 (65%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           + L+  RT KG+ FG +K +  +P +V+ Y+ K++++++FITH +P   +N A + M  G
Sbjct: 306 IQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHG 365
Query: 61  EGLRCIIRM 69
           + +R ++ +
Sbjct: 366 KCIRTVLSL 374

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL  RT KG   G +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSG 365
Query: 61  EGLRCII 67
           + +R I+
Sbjct: 366 KSIRTIL 372

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 7   RTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCI 66
           R++ GTFFG +K    +P++V  Y +K+ +++  +TH +PF  IN A + M  G+ +R I
Sbjct: 314 RSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTI 373
Query: 67  I 67
           +
Sbjct: 374 L 374

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 7   RTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCI 66
           R++ GTFFG +K    +P++V  Y +K+ +++  +TH +PF  IN A + M  G+ +R I
Sbjct: 314 RSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTI 373
Query: 67  I 67
           +
Sbjct: 374 L 374

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL  RT KG  +G +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSG 365
Query: 61  EGL 63
           + +
Sbjct: 366 KSI 368

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 7   RTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCI 66
           R+LKG+ FG +K   ++  +V+ YM K++ V   ++  +   +INKAFE +  G+G+R I
Sbjct: 312 RSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSI 370
Query: 67  I 67
           +
Sbjct: 371 M 371

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	71
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	1e-38
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	9e-38
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	7e-35
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	7e-35
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	2e-32
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	3e-28
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-23
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	3e-11
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	9e-11
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	2e-10
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	2e-09
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	3e-09
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	3e-09
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	3e-09
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-08
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	2e-08
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	5e-08
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	8e-08
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	1e-07
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	2e-07
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	5e-07
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	5e-04
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	5e-04

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  129 bits (327), Expect = 1e-38
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
             L+  RT KGT FG +K    +P +V +YMSK+++V++F+TH + F EINKAFE M  G
Sbjct: 305 FQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSG 364

Query: 61  EGLRCIIRM 69
           + +R ++++
Sbjct: 365 KSIRTVVKI 373

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  127 bits (321), Expect = 9e-38
 Identities = 26/68 (38%), Positives = 43/68 (63%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           M LL+ RT KG  FG +K +  +P +V  +M+K+  ++  ITH +PF +IN+ F+ +  G
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSG 365

Query: 61  EGLRCIIR 68
           E +R I+ 
Sbjct: 366 ESIRTILT 373

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  120 bits (302), Expect = 7e-35
 Identities = 22/68 (32%), Positives = 43/68 (63%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           ++++  R++ GTFFG +K    +P++V  Y +K+ +++  +TH +PF  IN A + M  G
Sbjct: 308 VDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEG 367

Query: 61  EGLRCIIR 68
           + +R I+ 
Sbjct: 368 KSIRTILT 375

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  120 bits (302), Expect = 7e-35
 Identities = 22/69 (31%), Positives = 45/69 (65%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           + L+  RT KG+ FG +K +  +P +V+ Y+ K++++++FITH +P   +N A + M  G
Sbjct: 306 IQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHG 365

Query: 61  EGLRCIIRM 69
           + +R ++ +
Sbjct: 366 KCIRTVLSL 374

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  113 bits (285), Expect = 2e-32
 Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG 60
           + LL  R+LKG+ FG +K   ++  +V+ YM K++ V   ++  +   +INKAFE +  G
Sbjct: 306 LLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSG 364

Query: 61  EGLRCIIR 68
           +G+R I+ 
Sbjct: 365 QGVRSIMI 372

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  102 bits (257), Expect = 3e-28
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           LL  +T+ G   G+  P+  +P +V  Y   +   ++ +     F EIN+A     +G  
Sbjct: 305 LLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT 363

Query: 63  LRCIIRM 69
           L+ II++
Sbjct: 364 LKPIIKI 370

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 90.4 bits (225), Expect = 1e-23
 Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 2   NLLNERTLKG-TFFGNY-KPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLR 59
            +     LK  TF G +    S     V         + K ITH +P  E NKA E M  
Sbjct: 309 KVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMES 368

Query: 60  GEGLRCIIRME 70
            E L+ I+  E
Sbjct: 369 REALKVILYPE 379

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 55.5 bits (134), Expect = 3e-11
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 5   NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLR 64
               + G+    +      P V+   M+  +++ K I+ TV   EI +  + +   + L 
Sbjct: 334 RRAQIVGSQ--GHSGHGTFPRVIS-LMASGMDMTKIISKTVSMEEIPEYIKRLQTDKSLV 390

Query: 65  CII 67
            + 
Sbjct: 391 KVT 393

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 54.1 bits (131), Expect = 9e-11
 Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 4   LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGL 63
           +   T  G      +             S  +++   +TH +P S   +AF  +  G+ +
Sbjct: 278 MRGITAFGIA--GRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAV 335

Query: 64  RCII 67
           + I+
Sbjct: 336 KVIL 339

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score = 53.4 bits (129), Expect = 2e-10
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 6/69 (8%)

Query: 4   LNERTLKGTF-FGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           + E  +KG F + N       P  +    SK + V+  +TH  P  +  +AFE   +G G
Sbjct: 288 IREVDIKGVFRYCN-----TWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLG 342

Query: 63  LRCIIRMEE 71
           L+ +++ + 
Sbjct: 343 LKIMLKCDP 351

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 50.7 bits (122), Expect = 2e-09
 Identities = 11/66 (16%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 5   NERTLKGTF--FGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLR-GE 61
            E T+ G++  + +  P  +  +       ++L +E  I H   F    +A   + R   
Sbjct: 279 KELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAM 338

Query: 62  GLRCII 67
             + ++
Sbjct: 339 PGKVLL 344

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 50.3 bits (121), Expect = 3e-09
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 5   NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVP-FSEINKAFEYMLRGEGL 63
              T+ G             +V     S +L ++  ITH    F +  +AFE M  G+  
Sbjct: 284 KALTIYGIT--GRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRAGKTG 341

Query: 64  RCIIRME 70
           + +  ++
Sbjct: 342 KVVFMLK 348

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 49.9 bits (120), Expect = 3e-09
 Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 6/58 (10%)

Query: 4   LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE 61
               ++   ++G    RS+L  VV    +  L      T T    E   A+  +  G 
Sbjct: 285 PFGASVVTPYWGT---RSELMEVVALARAGRL---DIHTETFTLDEGPAAYRRLREGS 336

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 49.9 bits (120), Expect = 3e-09
 Identities = 6/64 (9%), Positives = 21/64 (32%), Gaps = 4/64 (6%)

Query: 5   NERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLR 64
            E  + G+F   +          +   +  +E+++ I+  +   E             ++
Sbjct: 302 RELRVLGSFINPF----VHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVK 357

Query: 65  CIIR 68
            ++ 
Sbjct: 358 VLVI 361

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 48.6 bits (116), Expect = 1e-08
 Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 4   LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELE----VEKFITHTVPFSEINKAFEYMLR 59
              +T+ G   G    +      V    S +       +  IT TV  ++  +  + +  
Sbjct: 297 HTNKTIIGLVNGQ---KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLRE 353

Query: 60  GEGLRCIIRME 70
            E     IR+ 
Sbjct: 354 KEHGEIKIRIL 364

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score = 48.0 bits (115), Expect = 2e-08
 Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 8/71 (11%)

Query: 4   LNERTLKGTF-FGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG 62
           + E  L+  + + N       P  +    +  +++ + +TH  P  +  KAFE     + 
Sbjct: 298 VREVDLQFQYRYCN-----TWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKT 352

Query: 63  --LRCIIRMEE 71
             ++  I+  E
Sbjct: 353 GAIKVQIQSLE 363

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 46.5 bits (111), Expect = 5e-08
 Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 4/65 (6%)

Query: 4   LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGL 63
           L+ + L G+   N        + V      +  +E  +T   P SE   AF+       +
Sbjct: 293 LHNKALVGSV--NSHVEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDD--DDTTI 348

Query: 64  RCIIR 68
           +  I 
Sbjct: 349 KTAIE 353

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score = 46.1 bits (110), Expect = 8e-08
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 8/72 (11%)

Query: 3   LLNERTLKGTF-FGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYML--R 59
              E  +K  F + N     D P  +E   S    V++ +TH+    +   AFE      
Sbjct: 285 CAREIDIKSVFRYCN-----DYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKA 339

Query: 60  GEGLRCIIRMEE 71
              ++ +I   +
Sbjct: 340 DNTIKVMISCRQ 351

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 45.3 bits (108), Expect = 1e-07
 Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 5/58 (8%)

Query: 4   LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE 61
           L+E    G+  GN   +SD   ++   +++  +V+  IT T+   E N+A + +   +
Sbjct: 286 LSEIQFVGSLVGN---QSDFLGIMR--LAEAGKVKPMITKTMKLEEANEAIDNLENFK 338

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score = 44.6 bits (106), Expect = 2e-07
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 4   LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE 61
            +E + +G+  GN     +L  +V   +  ++ VE          EIN   E + +GE
Sbjct: 299 SSEVSFEGSLVGN---YVELHELVTLALQGKVRVE---VDIHKLDEINDVLERLEKGE 350

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 43.8 bits (104), Expect = 5e-07
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 6/58 (10%)

Query: 4   LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE 61
           +  + L G+ +G+    +DL  VV    S +++        VP  +INKAF  +  G 
Sbjct: 284 VWNKKLLGSNYGS---LNDLEDVVRLSESGKIKP---YIIKVPLDDINKAFTNLDEGR 335

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 35.5 bits (82), Expect = 5e-04
 Identities = 5/59 (8%), Positives = 17/59 (28%), Gaps = 5/59 (8%)

Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE 61
            ++ + + G+ F N     +            +     ++      +  +A   + R  
Sbjct: 359 WMSLKRIIGSHFAN---YREAWEANRLIAKGRIHPT--LSKVYSLEDTGQAAYDVHRNL 412

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 35.2 bits (81), Expect = 5e-04
 Identities = 6/59 (10%), Positives = 19/59 (32%), Gaps = 5/59 (8%)

Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE 61
            +  + + G+   N     +  +    + S  +     ++   P +E  +A   +    
Sbjct: 351 WMKLKKIVGSHGAN---HEEQQATNRLFESGAVVPA--MSAVYPLAEAAEACRVVQTSR 404

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	71
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	99.43
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	99.39
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	99.28
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	99.26
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	99.26
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	99.25
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	99.25
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	99.24
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	99.23
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	99.22
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	99.2
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	99.2
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	99.16
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	99.16
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	99.15
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	99.13
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	99.12
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	99.02
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.96
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	98.95
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.95
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	98.94
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	98.93
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	98.93
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	98.93
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	98.93
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.92
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	98.92
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.89
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.87
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.87
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.86
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	98.85
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.83
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	98.82
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	98.82
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	98.81
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	98.8
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.8
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.79
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	98.79
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	98.77
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	98.77
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.75
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.73
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	98.73
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.72
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	98.72
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.69
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.69
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	98.68
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.67
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.66
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.61
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	98.6
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.58
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	98.57
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	98.54
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	98.54
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	98.5
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.48
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	98.47
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	98.46
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	98.46
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	98.43
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	98.43
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.28
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	98.17
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.02
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	97.53

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=99.43  E-value=1.6e-13  Score=81.81  Aligned_cols=67  Identities=18%  Similarity=0.288  Sum_probs=56.5

Q ss_pred             cccceeEeeeeecccc--cCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYK--PRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~--~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.|+++++|++.+...  +.++++++++++++|+++++++|+++|||+|+++||+.+.+++. +|+||.|
T Consensus       277 ~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          277 LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             HHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             hhceeEEEEEeccccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            4589999999854221  23568999999999999999999999999999999999988764 8999975

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=99.39  E-value=4.1e-13  Score=81.14  Aligned_cols=68  Identities=44%  Similarity=0.862  Sum_probs=59.4

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEeecC
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE   71 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~~~   71 (71)
                      .++++++|++.|.+....+++++++++.+|+++++++|+++|||+|+++||+.+.+++..|+++++++
T Consensus       311 ~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~Kvvi~~~~  378 (378)
T 3uko_A          311 VTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVLDTSK  378 (378)
T ss_dssp             HTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCSEEEEETTC
T ss_pred             hcCcEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCceEEEEecCC
Confidence            45889999986654334679999999999999999999999999999999999988887899999875

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=99.28  E-value=5.1e-12  Score=75.37  Aligned_cols=63  Identities=21%  Similarity=0.304  Sum_probs=52.7

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeecC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRMEE   71 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~~   71 (71)
                      +.+++++.|++.++   +.+++++++++++|++++  + +++|||+|+++||+.+.+++. +|+||++++
T Consensus       277 ~~~~~~i~gs~~~~---~~~~~~~~~l~~~g~i~p--~-~~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk  340 (348)
T 4eez_A          277 VFDGVEVAGSLVGT---RLDLAEAFQFGAEGKVKP--I-VATRKLEEINDIIDEMKAGKIEGRMVIDFTK  340 (348)
T ss_dssp             HHSCCEEEECCSCC---HHHHHHHHHHHHTTSCCC--C-EEEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred             HhCCeEEEEEecCC---HHHHHHHHHHHHcCCCEE--E-EEEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence            46899999998543   267999999999999864  4 479999999999999999875 799999864

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=99.26  E-value=7.2e-12  Score=75.49  Aligned_cols=66  Identities=26%  Similarity=0.439  Sum_probs=56.0

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEeec
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~~   70 (71)
                      .+++++.|++.+.+.+..+++++++++++|++++.++|++ |||+|+++||+.+.+++.+|+++++.
T Consensus       306 ~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~~Kvvv~~~  371 (371)
T 1f8f_A          306 LGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGITLKPIIKIA  371 (371)
T ss_dssp             HTTCEEEECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSCSEEEEECC
T ss_pred             hCCCEEEEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCceEEEEeeC
Confidence            5789999998553322357899999999999999999998 99999999999998877789999863

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=99.26  E-value=1.5e-11  Score=73.42  Aligned_cols=66  Identities=17%  Similarity=0.246  Sum_probs=56.6

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~~   70 (71)
                      +.+++++.|++.+. . ..+++++++++++|+++++++|+++|||+|+++||+.+.+++.+|++++++
T Consensus       277 ~~~~~~i~g~~~~~-~-~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvv~~~~  342 (343)
T 2dq4_A          277 VMRGITAFGIAGRR-L-WQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVILDPK  342 (343)
T ss_dssp             GGGTCEEEECCSCC-T-THHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSCSEEEEETT
T ss_pred             HhCceEEEEeecCC-C-HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCceEEEEeeC
Confidence            46899999987321 2 367999999999999988999999999999999999988776699999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=99.25  E-value=2e-11  Score=73.65  Aligned_cols=64  Identities=33%  Similarity=0.699  Sum_probs=55.0

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      .++ ++.|++.+.+.+ .+++++++++++|++++.++|+++|||+|+++||+.+.+++.+|+++++
T Consensus       310 ~~~-~i~g~~~~~~~~-~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 1p0f_A          310 TGR-SLKGSVFGGFKG-EEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIMIY  373 (373)
T ss_dssp             TTC-EEEECSGGGCCG-GGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSCSEEEEEC
T ss_pred             cCc-eEEeeccCCcCH-HHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCcceEEEeC
Confidence            356 899987554443 6899999999999999989999999999999999999887778999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=99.25  E-value=1.2e-11  Score=74.62  Aligned_cols=65  Identities=34%  Similarity=0.779  Sum_probs=54.7

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      .++ ++.|++.+.+....+++++++++++|++++.++|+++|||+|+++||+.+.+++.+|+++++
T Consensus       310 ~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~  374 (374)
T 2jhf_A          310 SGR-TWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF  374 (374)
T ss_dssp             TTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             cCC-eEEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCcceEEEeC
Confidence            356 89998754332235789999999999999989999999999999999999887778999875

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=99.24  E-value=1.3e-11  Score=74.47  Aligned_cols=65  Identities=34%  Similarity=0.785  Sum_probs=54.7

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      .++ ++.|++.+.+....+++++++++.+|+++++++|+++|||+|+++||+.+.+++.+|+++++
T Consensus       312 ~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~  376 (376)
T 1e3i_A          312 LGR-SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTILTF  376 (376)
T ss_dssp             TTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             ccC-eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCcceEEEeC
Confidence            466 89998754332235789999999999999989999999999999999999887778999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=99.23  E-value=1.7e-11  Score=73.96  Aligned_cols=65  Identities=31%  Similarity=0.750  Sum_probs=54.6

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      .++ ++.|++.+.+....+++++++++.+|+++++++|+++|||+|+++||+.+.+++.+|++++|
T Consensus       310 ~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  374 (374)
T 1cdo_A          310 AGR-TWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  374 (374)
T ss_dssp             TTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             cCC-eEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCeeEEEEeC
Confidence            356 89998754332235789999999999999989999999999999999999888778999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=99.22  E-value=1.8e-11  Score=73.78  Aligned_cols=65  Identities=43%  Similarity=0.836  Sum_probs=54.5

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      .++ +++|++.+.+....+++++++++++|++++.++|+++|||+|+++||+.+.+++.+|+++++
T Consensus       309 ~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 2fzw_A          309 TGR-TWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  373 (373)
T ss_dssp             TTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             cCC-EEEEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCcceEEEeC
Confidence            356 89998754332235789999999999999989999999999999999999888778999875

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=99.20  E-value=8.3e-11  Score=70.61  Aligned_cols=64  Identities=28%  Similarity=0.576  Sum_probs=55.9

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~~   70 (71)
                      +.+++++.|++  .+  ..+++++++++++|+++++++|+++|||+|+++||+.+.++..+|+++.++
T Consensus       287 ~~~~~~i~g~~--~~--~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~~  350 (356)
T 1pl8_A          287 AIREVDIKGVF--RY--CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCD  350 (356)
T ss_dssp             HHTTCEEEECC--SC--SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEECC
T ss_pred             HhcceEEEEec--cc--HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCCCceEEEEeCC
Confidence            35789999987  33  378999999999999999999999999999999999998885589999874

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=99.20  E-value=8.6e-11  Score=70.39  Aligned_cols=65  Identities=23%  Similarity=0.393  Sum_probs=56.5

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc--eeeEEEeecC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE--GLRCIIRMEE   71 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~--~~kvvi~~~~   71 (71)
                      +.+++++.|++  .+  ..+++++++++.+|+++++++++++|||+++++||+.+.+++  .+|+++++++
T Consensus       285 ~~~~~~i~g~~--~~--~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          285 CAREIDIKSVF--RY--CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             HTTTCEEEECC--SC--SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             HhcCcEEEEec--cc--hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            35789999987  33  378999999999999999999999999999999999998875  5899998853

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=99.16  E-value=5.3e-11  Score=71.22  Aligned_cols=66  Identities=21%  Similarity=0.292  Sum_probs=55.2

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeee-hhhHHHHHHHHhcCceeeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVP-FSEINKAFEYMLRGEGLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~-l~~~~~a~~~~~~~~~~kvvi~~~   70 (71)
                      +.+++++.|++.+  ....+++++++++++|++++.++|+++|| |+|+++||+.+.++..+|+++.++
T Consensus       282 ~~~~~~i~g~~~~--~~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~gKvvi~~~  348 (348)
T 2d8a_A          282 IFKALTIYGITGR--HLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRAGKTGKVVFMLK  348 (348)
T ss_dssp             TTTTCEEEECCCC--CSHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHTTCCSEEEEEC-
T ss_pred             HhCCcEEEEecCC--CcHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhCCCceEEEEeeC
Confidence            4688999998733  21267999999999999988999999999 999999999987755689999863

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=99.16  E-value=1.3e-10  Score=69.82  Aligned_cols=65  Identities=20%  Similarity=0.337  Sum_probs=55.8

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcC-c-eeeEEEeecC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRG-E-GLRCIIRMEE   71 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~-~-~~kvvi~~~~   71 (71)
                      +.+++++.|++  .+  ..+++++++++++|++++.++|+++|||+++++||+.+.++ . .+|++++.++
T Consensus       297 ~~~~~~i~g~~--~~--~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          297 SVREVDLQFQY--RY--CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             HHHTCEEEECC--SC--SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             HhcCcEEEEcc--CC--HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence            35789999998  33  37899999999999999999999999999999999999886 3 4799998753

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=99.15  E-value=6.6e-11  Score=71.48  Aligned_cols=64  Identities=14%  Similarity=0.214  Sum_probs=54.0

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc--eeeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE--GLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~--~~kvvi~~~   70 (71)
                      +.+++++.|++.  +.  .+++++++++++|++++.++|+++|||+|+++||+.+.+++  .+|++++++
T Consensus       300 ~~~~~~i~g~~~--~~--~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~  365 (370)
T 4ej6_A          300 LFRELRVLGSFI--NP--FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAE  365 (370)
T ss_dssp             HHTTCEEEECCS--CT--TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC--
T ss_pred             HhCCcEEEEecc--Ch--HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEccc
Confidence            358999999983  22  67999999999999999999999999999999999988765  378888874

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=99.13  E-value=1.2e-10  Score=69.75  Aligned_cols=65  Identities=18%  Similarity=0.368  Sum_probs=54.5

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeee-hhhHHHHHHHHhcCc--eeeEEEeec
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVP-FSEINKAFEYMLRGE--GLRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~-l~~~~~a~~~~~~~~--~~kvvi~~~   70 (71)
                      .+++++.|++..  ....+++++++++++|++++.++|+++|| |+|+++||+.+.+++  .+|++++++
T Consensus       285 ~~~~~i~g~~~~--~~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          285 MGHKHIHGGLCP--GGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             TBCEEEEEBCCC--CHHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             ccccEEEEeecc--CchhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            478899998732  11257999999999999999999999999 999999999998754  379999874

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=99.12  E-value=7.3e-11  Score=71.77  Aligned_cols=65  Identities=5%  Similarity=0.054  Sum_probs=55.3

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCc--cccceeeeeehhhHHHHHHHHhcCceeeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELE--VEKFITHTVPFSEINKAFEYMLRGEGLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~--~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~~   70 (71)
                      +.+++++.|++.  .. ..+++++++++++|+++  +.++|+++|||+|+++||+.+.+++.+|+++.++
T Consensus       326 ~~k~~~i~g~~~--~~-~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvv~~~  392 (398)
T 2dph_A          326 WTKSIRIMTGMA--PV-TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPAKFVIDPH  392 (398)
T ss_dssp             HHTTCEEECSSC--CG-GGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCSCEEEECTT
T ss_pred             hhcCCEEEEecc--Cc-HHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCceEEEEecC
Confidence            357889998763  22 36799999999999999  8889999999999999999998876699999874

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=99.02  E-value=9.3e-11  Score=70.61  Aligned_cols=65  Identities=15%  Similarity=0.137  Sum_probs=54.0

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCc----cccceeeeeehhhHHHHHHH--HhcCceeeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELE----VEKFITHTVPFSEINKAFEY--MLRGEGLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~----~~~~it~~~~l~~~~~a~~~--~~~~~~~kvvi~~~   70 (71)
                      +.+++++.|++.  +.+ .+++++++++++|+++    ++++|+++|||+++++||+.  +.++..+|++++++
T Consensus       296 ~~~~~~i~g~~~--~~~-~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~  366 (366)
T 2cdc_A          296 VHTNKTIIGLVN--GQK-PHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE  366 (366)
T ss_dssp             HHTTCEEEECCC--CCH-HHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred             HhcCcEEEEecC--CCH-HHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence            457899999873  222 6799999999999987    88899999999999999998  56445689999864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.96  E-value=1.1e-09  Score=65.47  Aligned_cols=62  Identities=21%  Similarity=0.295  Sum_probs=51.7

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.+++++.|++.+  .+ .+++++++++++|+++  ++|+++|||+|+++||+.+.+++. +|+++.+
T Consensus       285 ~~~~~~i~g~~~~--~~-~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          285 TLSEIQFVGSLVG--NQ-SDFLGIMRLAEAGKVK--PMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             HHHTCEEEECCSC--CH-HHHHHHHHHHHTTSSC--CCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HhCceEEEEEecc--CH-HHHHHHHHHHHcCCCC--ceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            3578999998843  22 6799999999999874  589999999999999999988774 7999874

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=98.95  E-value=5.7e-10  Score=67.76  Aligned_cols=64  Identities=6%  Similarity=0.056  Sum_probs=51.8

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCc-cccceeeeeehhhHHHHHHHHhcCceeeEEEeec
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELE-VEKFITHTVPFSEINKAFEYMLRGEGLRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~-~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~~   70 (71)
                      .+++++.|+..  .. ..+++++++++.+|+++ +.++++++|||+|+++||+.+.+++.+|++++++
T Consensus       328 ~~~~~~~g~~~--~~-~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~~  392 (398)
T 1kol_A          328 AKSHSFHTGQT--PV-MKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPKKFVIDPH  392 (398)
T ss_dssp             HTTCEEEESSC--CH-HHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCSCEEEECTT
T ss_pred             hcccEEEeccc--Ch-HHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCceEEEEEeC
Confidence            46778887652  11 25678999999999998 4568899999999999999998876699999874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.95  E-value=2.5e-09  Score=63.85  Aligned_cols=61  Identities=8%  Similarity=0.203  Sum_probs=51.6

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEee
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~   69 (71)
                      .+++++.|++.+  . ..+++++++++.+|+++  ++++++|||+|+++||+.+.+++ .+|+++.+
T Consensus       281 ~~~~~~~g~~~~--~-~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          281 YRQLSILGSTMA--S-KSRLFPILRFVEEGKLK--PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             HTTCEEEECCSC--C-GGGHHHHHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             hCCcEEEEecCc--c-HHHHHHHHHHHHcCCCC--CceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            578999998732  2 36799999999999885  58899999999999999998876 47999976

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=98.94  E-value=6e-10  Score=67.91  Aligned_cols=61  Identities=16%  Similarity=0.296  Sum_probs=50.8

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      +.+++++.|++.  +....+++++++++++| +++.++|+++|||+|+++||+.+.   .+|+++++
T Consensus       332 ~~~~~~i~g~~~--~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~---~GKvvl~~  392 (404)
T 3ip1_A          332 QVRRAQIVGSQG--HSGHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ---TDKSLVKV  392 (404)
T ss_dssp             HHTTCEEEECCC--CCSTTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT---TCTTCSCE
T ss_pred             hccceEEEEecC--CCchHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh---CCcEEEec
Confidence            357899999883  22237899999999999 999999999999999999999887   35677765

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=98.93  E-value=1.4e-09  Score=64.94  Aligned_cols=62  Identities=19%  Similarity=0.216  Sum_probs=52.1

Q ss_pred             CcccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            2 NLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         2 ~~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .+.+++++.|++.+  .+ .+++++++++++|++++   ++++|||+|+++||+.+.+++. +|+++.|
T Consensus       283 ~~~~~~~i~g~~~~--~~-~~~~~~~~l~~~g~l~~---~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          283 MIPFGASVVTPYWG--TR-SELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             TSCTTCEEECCCSC--CH-HHHHHHHHHHHTTCCCC---CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             HHhCCCEEEEEecC--CH-HHHHHHHHHHHcCCCce---EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            35689999999843  22 67999999999999876   5689999999999999988875 7999875

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=98.93  E-value=1e-09  Score=66.04  Aligned_cols=62  Identities=24%  Similarity=0.334  Sum_probs=52.7

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      +.+++++.|++.+  . ..+++++++++++|++  +++++++|||+|+++||+.+.+++.+|++|++
T Consensus       302 ~~~~~~i~g~~~~--~-~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~  363 (363)
T 3uog_A          302 LLKSPVVQGISVG--H-RRALEDLVGAVDRLGL--KPVIDMRYKFTEVPEALAHLDRGPFGKVVIEF  363 (363)
T ss_dssp             HHTCCEEEECCCC--C-HHHHHHHHHHHHHHTC--CCCEEEEEEGGGHHHHHHTGGGCCSBEEEEEC
T ss_pred             HhCCcEEEEEecC--C-HHHHHHHHHHHHcCCC--ccceeeEEcHHHHHHHHHHHHcCCCccEEEeC
Confidence            4578999999843  2 2679999999999976  56899999999999999999887778999875

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=98.93  E-value=2.1e-09  Score=64.11  Aligned_cols=63  Identities=19%  Similarity=0.369  Sum_probs=52.5

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeecC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRMEE   71 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~~   71 (71)
                      +.+++++.|++.+  .+ .+++++++++++|++++  . ++++||+++++||+.+.+++. +|+++++++
T Consensus       277 ~~~~~~i~g~~~~--~~-~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          277 VLKGITIRGSIVG--TR-SDLQESLDFAAHGDVKA--T-VSTAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             HHTTCEEEECCSC--CH-HHHHHHHHHHHTTSCCC--C-EEEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             HhCCeEEEEEecC--CH-HHHHHHHHHHHhCCCCc--e-EEEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            3578999999843  32 67999999999999875  3 568999999999999988775 799999864

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=98.93  E-value=1.5e-09  Score=64.89  Aligned_cols=61  Identities=18%  Similarity=0.356  Sum_probs=52.0

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeec
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      .+++++.|++.+  .+ .+++++++++++|++++  . +++|||+|+++||+.+.+++. +|++++++
T Consensus       283 ~~~~~i~g~~~~--~~-~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~~gKvVi~~~  344 (348)
T 3two_A          283 LGNRKVYGSLIG--GI-KETQEMVDFSIKHNIYP--E-IDLILGKDIDTAYHNLTHGKAKFRYVIDMK  344 (348)
T ss_dssp             TCSCEEEECCSC--CH-HHHHHHHHHHHHTTCCC--C-EEEECGGGHHHHHHHHHTTCCCSEEEEEGG
T ss_pred             hCCeEEEEEecC--CH-HHHHHHHHHHHhCCCCc--e-EEEEEHHHHHHHHHHHHcCCCceEEEEecC
Confidence            689999999844  32 67999999999999876  3 479999999999999988875 89999885

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.92  E-value=2.4e-09  Score=64.02  Aligned_cols=62  Identities=15%  Similarity=0.307  Sum_probs=51.4

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEeecC
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRMEE   71 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~~~   71 (71)
                      .+++++.|++.+  .+ .+++++++++++|++++  . +++|||+|+++||+.+.+++ .+|+++++++
T Consensus       285 ~~~~~i~g~~~~--~~-~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  347 (347)
T 2hcy_A          285 VKSISIVGSYVG--NR-ADTREALDFFARGLVKS--P-IKVVGLSTLPEIYEKMEKGQIVGRYVVDTSK  347 (347)
T ss_dssp             HTTCEEEECCCC--CH-HHHHHHHHHHHTTSCCC--C-EEEEEGGGHHHHHHHHHTTCCSSEEEEESCC
T ss_pred             hCCcEEEEccCC--CH-HHHHHHHHHHHhCCCcc--c-eEEEcHHHHHHHHHHHHcCCcceeEEEecCC
Confidence            478999998843  22 67999999999999876  3 57999999999999998876 4899998864

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=98.92  E-value=8.9e-10  Score=66.71  Aligned_cols=63  Identities=35%  Similarity=0.494  Sum_probs=52.7

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHc--CCCccccceeeeeehhhHHHHHHHHhcCceeeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMS--KELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~--g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~~   70 (71)
                      +.+++++.|++.+  .+ .+++++++++++  |++  +++++++|||+|+++||+.+.+++..|++++++
T Consensus       315 ~~~~~~i~g~~~~--~~-~~~~~~~~l~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvl~~~  379 (380)
T 1vj0_A          315 VLKNATFKGIWVS--DT-SHFVKTVSITSRNYQLL--SKLITHRLPLKEANKALELMESREALKVILYPE  379 (380)
T ss_dssp             TTTTCEEEECCCC--CH-HHHHHHHHHHHTCHHHH--GGGCCEEEEGGGHHHHHHHHHHTSCSCEEEECC
T ss_pred             HhCCeEEEEeecC--CH-HHHHHHHHHHHhhcCCe--eeEEEEEEeHHHHHHHHHHHhcCCCceEEEEeC
Confidence            5689999998843  22 679999999999  977  678999999999999999988765349999874

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.89  E-value=3.6e-09  Score=63.17  Aligned_cols=62  Identities=24%  Similarity=0.496  Sum_probs=51.2

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEeecC
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRMEE   71 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~~~   71 (71)
                      .+++++.|++.+  .+ .+++++++++.+|++++  . +++|||+|+++||+.+.+++ .+|+++.+++
T Consensus       276 ~~~~~i~g~~~~--~~-~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          276 LNGIKIIGSIVG--TR-KDLQEALQFAAEGKVKT--I-IEVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             HTTCEEEECCSC--CH-HHHHHHHHHHHTTSCCC--C-EEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             hCCcEEEEeccC--CH-HHHHHHHHHHHcCCCCc--c-EEEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            478999998843  22 67999999999999876  3 57999999999999998876 4899998753

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.87  E-value=4.8e-09  Score=64.55  Aligned_cols=62  Identities=8%  Similarity=0.115  Sum_probs=51.3

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.++++++|++.+  .. .++.++++++++|+++  ++++++|||+|+++||+.+.+++. +|+++.+
T Consensus       351 ~~~~~~i~g~~~~--~~-~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~  413 (447)
T 4a0s_A          351 WMKLKKIVGSHGA--NH-EEQQATNRLFESGAVV--PAMSAVYPLAEAAEACRVVQTSRQVGKVAVLC  413 (447)
T ss_dssp             HHTTCEEEECCSC--CH-HHHHHHHHHHHTTSSC--CCEEEEEEGGGHHHHHHHHHTTCCSSEEEEES
T ss_pred             HhCCCEEEecCCC--CH-HHHHHHHHHHHcCCcc--cceeEEEcHHHHHHHHHHHhcCCCceEEEEEe
Confidence            3578899998843  22 5688999999999885  589999999999999999988764 7998876

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.87  E-value=4.4e-09  Score=64.99  Aligned_cols=62  Identities=10%  Similarity=0.115  Sum_probs=51.1

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.++++++|++.+.+   .++.++++++++|+++  ++++++|||+|+++||+.+.+++. +|+++.+
T Consensus       359 ~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~eA~~~l~~~~~~GKvvv~~  421 (456)
T 3krt_A          359 WMSLKRIIGSHFANY---REAWEANRLIAKGRIH--PTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLC  421 (456)
T ss_dssp             HHTTCEEEECCSCCH---HHHHHHHHHHHTTSSC--CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEES
T ss_pred             HhcCeEEEEeccCCH---HHHHHHHHHHHcCCcc--cceeEEEcHHHHHHHHHHHHhCCCCCcEEEEe
Confidence            346789999985432   5677899999999885  589999999999999999888764 8998875

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.86  E-value=4.9e-09  Score=62.92  Aligned_cols=62  Identities=13%  Similarity=0.251  Sum_probs=50.6

Q ss_pred             cccceeEeeeeecccccCCC----------HHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSD----------LPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~----------~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.+++++.|++.+.+   .+          ++++++++++|++  +++++++|||+|+++||+.+.+++. +|+++++
T Consensus       281 ~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          281 MVKRLTVTGSTMRPR---TAEEKRAIRDDLLSEVWPLLEAGTV--APVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHTTCEEEECCSTTS---CHHHHHHHHHHHHHHTHHHHHHTSS--CCCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HhcCceEEEEecccc---chhhhHHHHHHHHHHHHHHHHCCCc--cCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            357899999885432   22          7789999999987  4589999999999999999988774 7999874

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=98.85  E-value=5e-09  Score=62.99  Aligned_cols=61  Identities=21%  Similarity=0.345  Sum_probs=50.7

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.+++++.|++.+  .+ .+++++++++++|++++  .+ ++|||+|+++||+.+.+++. +|+++.+
T Consensus       298 ~~~~~~i~g~~~~--~~-~~~~~~~~l~~~g~l~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          298 ISSEVSFEGSLVG--NY-VELHELVTLALQGKVRV--EV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHTTCEEEECCSC--CH-HHHHHHHHHHHTTSCCC--CE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HhCCcEEEEecCC--CH-HHHHHHHHHHHcCCCcc--eE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            3588999998843  22 67999999999998864  67 89999999999999988774 8999874

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.83  E-value=1.3e-08  Score=60.53  Aligned_cols=67  Identities=15%  Similarity=0.094  Sum_probs=51.7

Q ss_pred             cccceeEeeeeeccccc-CC----CHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeecC
Q 035170            3 LLNERTLKGTFFGNYKP-RS----DLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRMEE   71 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~-~~----~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~~   71 (71)
                      ..+++++.|+..+++.. ..    .++++++++++|++++  .++++|||+++++||+.+.+++. +|+++++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          262 SPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNI--KIYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             TTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCC--CEEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             hhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccC--ceeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence            35788999876443321 12    2368899999999976  48999999999999999988765 799998753

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=98.82  E-value=7.5e-09  Score=61.33  Aligned_cols=63  Identities=16%  Similarity=0.192  Sum_probs=51.2

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeec
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      .+++++.|++.. .. .++++++++++++|++++  .++++|||+|+++||+.+.+++. +|+++++.
T Consensus       258 ~~~~~~~~~~~~-~~-~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          258 QKHRRAFGLLKQ-FN-IEELHYLGKLVSEDKLRI--EISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             HTTCEEECCCCC-CC-HHHHHHHHHHHHTTSSCC--CEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             hcceEEEEEecC-CC-HHHHHHHHHHHHCCCccc--ccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            467888886522 22 267999999999999865  78999999999999999988775 79999863

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=98.82  E-value=2.7e-09  Score=63.93  Aligned_cols=65  Identities=14%  Similarity=0.217  Sum_probs=51.5

Q ss_pred             ccceeEeeeeeccccc--------CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeec
Q 035170            4 LNERTLKGTFFGNYKP--------RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~--------~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      .+++++.|++.+.+..        ..+++++++++++|++  +++++++|||+|+++||+.+.+++. +|++++++
T Consensus       270 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~  343 (349)
T 4a27_A          270 EENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKI--KPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVE  343 (349)
T ss_dssp             HHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSC--CCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETT
T ss_pred             hcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCc--cccccceECHHHHHHHHHHHHhCCCCceEEEecC
Confidence            3577888876432110        2568999999999988  4689999999999999999988765 79999885

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=98.81  E-value=4.3e-10  Score=67.55  Aligned_cols=63  Identities=17%  Similarity=0.328  Sum_probs=52.9

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcC--CCccccceeeeeehhhHHHHHHHHhcCceeeEEEeecC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSK--ELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE   71 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g--~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~~~   71 (71)
                      +.+++++.|++.+  . ..+++++++++++|  ++ ++++++++|||+|+++||+.+  +..+|+++++++
T Consensus       292 ~~~~~~i~g~~~~--~-~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l~~~~~A~~~~--~~~gKvvi~~~~  356 (357)
T 2b5w_A          292 VLHNKALVGSVNS--H-VEHFEAATVTFTKLPKWF-LEDLVTGVHPLSEFEAAFDDD--DTTIKTAIEFST  356 (357)
T ss_dssp             HHTTCEEEECCCC--C-HHHHHHHHHHHHHSCHHH-HHHHEEEEEEGGGGGGGGCCS--TTCCEEEEECCC
T ss_pred             HhCCeEEEEeccC--C-HHHHHHHHHHHHhCchhh-hhhhcceeecHHHHHHHHHHh--CCCceEEEEecC
Confidence            4689999998843  2 26799999999999  86 778999999999999999988  556899998753

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=98.80  E-value=7e-09  Score=62.32  Aligned_cols=62  Identities=24%  Similarity=0.462  Sum_probs=50.9

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      +.+++++.|++.+  .+ .+++++++++++|++++  .+ ++|||+|+++||+.+.+++. +|+++.++
T Consensus       289 ~~~~~~i~g~~~~--~~-~~~~~~~~l~~~g~l~~--~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  351 (357)
T 2cf5_A          289 MLGRKVITGSFIG--SM-KETEEMLEFCKEKGLSS--II-EVVKMDYVNTAFERLEKNDVRYRFVVDVE  351 (357)
T ss_dssp             HHHTCEEEECCSC--CH-HHHHHHHHHHHHTTCCC--CE-EEEEGGGHHHHHHHHHTTCSSSEEEEETT
T ss_pred             HhCccEEEEEccC--CH-HHHHHHHHHHHcCCCCC--ce-EEEeHHHHHHHHHHHHCCCCceEEEEeCC
Confidence            3578999998843  22 67999999999999875  34 69999999999999988764 79999874

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.80  E-value=6.7e-09  Score=62.09  Aligned_cols=64  Identities=16%  Similarity=0.259  Sum_probs=51.5

Q ss_pred             cccceeEeeeeecccc---c---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYK---P---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~---~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.+++++.|++.+.+.   +   ...++++++++++| +  +++++++|||+++++||+.+.+++. +|++++|
T Consensus       272 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l--~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          272 LLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-M--RPPVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             GGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-C--CCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             hhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-C--CCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            4689999998854331   1   13478899999999 5  6689999999999999999988775 7999875

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.79  E-value=1.2e-08  Score=60.64  Aligned_cols=67  Identities=10%  Similarity=0.087  Sum_probs=51.8

Q ss_pred             cccc--eeEeeeeeccc-cc---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEeecC
Q 035170            3 LLNE--RTLKGTFFGNY-KP---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRMEE   71 (71)
Q Consensus         3 ~~~~--~~i~Gs~~g~~-~~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~~~   71 (71)
                      +.++  +++.|++.+.+ .+   ...++++++++.+|+++  ++++++|||+|+++||+.+.+++ .+|+++.+++
T Consensus       260 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          260 GVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLH--SSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             TTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             hhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcC--CCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            3567  89999863211 11   12588999999999885  57999999999999999988766 4799998753

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=98.79  E-value=3.3e-09  Score=63.35  Aligned_cols=61  Identities=31%  Similarity=0.437  Sum_probs=37.1

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.+++++.|++.+  .+ .+++++++++.+|++++  .+ ++|||+|+++||+.+.+++. +|+++.+
T Consensus       283 ~~~~~~i~g~~~~--~~-~~~~~~~~l~~~g~i~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          283 AVWNKKLLGSNYG--SL-NDLEDVVRLSESGKIKP--YI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             HHTTCEEEECCSC--CH-HHHHHHHHHHHTTSSCC--CE-EEECC----------------CEEEECC
T ss_pred             hhCCcEEEEEecC--CH-HHHHHHHHHHHcCCCCc--ce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            3578999998843  22 67999999999998864  57 89999999999999988764 8999864

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=98.77  E-value=1.2e-08  Score=61.28  Aligned_cols=62  Identities=21%  Similarity=0.386  Sum_probs=51.3

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhh--HHHHHHHHhcCce-eeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSE--INKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~--~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      +.+++++.|++.+  .+ .+++++++++++|++++  .+ ++|||+|  +++||+.+.+++. +|+++.++
T Consensus       290 ~~~~~~i~g~~~~--~~-~~~~~~~~l~~~g~l~~--~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~  354 (360)
T 1piw_A          290 GLKAVSISYSALG--SI-KELNQLLKLVSEKDIKI--WV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGY  354 (360)
T ss_dssp             GCBSCEEEECCCC--CH-HHHHHHHHHHHHTTCCC--CE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             HhCCeEEEEEecC--CH-HHHHHHHHHHHhCCCcc--eE-EEEeccHhHHHHHHHHHHCCCCceEEEEecC
Confidence            4578999998843  22 67999999999998865  56 8999999  9999999988764 79999873

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=98.77  E-value=9.1e-09  Score=62.14  Aligned_cols=68  Identities=13%  Similarity=0.071  Sum_probs=51.4

Q ss_pred             cccceeEeeeeecccccC------CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-e-eEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPR------SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-L-RCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~------~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~-kvvi~~~   70 (71)
                      +.+++++.|++.+...+.      ..++++++++++|++++.+++++.|||+++++||+.+.+++. + |+++.++
T Consensus       286 ~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~  361 (371)
T 3gqv_A          286 FGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLE  361 (371)
T ss_dssp             GTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEEC
T ss_pred             ccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeC
Confidence            347888888763322210      123478899999999999999999999999999999988764 4 7777763

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.75  E-value=7.8e-09  Score=62.27  Aligned_cols=67  Identities=18%  Similarity=0.309  Sum_probs=52.0

Q ss_pred             ccceeEeeeeecccc--cCCCHHHHHHHHHcCCCccccc------eeeeeehhhHHHHHHHHhcCc-eeeEEEeec
Q 035170            4 LNERTLKGTFFGNYK--PRSDLPSVVEKYMSKELEVEKF------ITHTVPFSEINKAFEYMLRGE-GLRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~--~~~~~~~~i~l~~~g~~~~~~~------it~~~~l~~~~~a~~~~~~~~-~~kvvi~~~   70 (71)
                      .+++++.|++.+.+.  ...+++++++++++|++++...      +++.+||+++++||+.+.+++ .+|+++.+.
T Consensus       286 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  361 (362)
T 2c0c_A          286 KKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP  361 (362)
T ss_dssp             HHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECC
T ss_pred             hhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcC
Confidence            478899998744321  1246889999999999987544      456789999999999998776 489999875

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.73  E-value=2.5e-08  Score=59.43  Aligned_cols=65  Identities=8%  Similarity=0.109  Sum_probs=50.3

Q ss_pred             ccceeEeeeeecccc--cCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeec
Q 035170            4 LNERTLKGTFFGNYK--PRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~--~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      .+++++.|++.+.+.  ....++++++++++|+++  ++++++|||+++++||+.+.+++. +|+++.++
T Consensus       276 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~--~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  343 (345)
T 2j3h_A          276 YKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKIT--YVEDVADGLEKAPEALVGLFHGKNVGKQVVVVA  343 (345)
T ss_dssp             HHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSC--CCEEEEESGGGSHHHHHHHHTTCCSSEEEEESS
T ss_pred             hhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCc--CcccccCCHHHHHHHHHHHHcCCCceEEEEEeC
Confidence            478899998743221  012388999999999886  477778999999999999988764 79999875

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=98.73  E-value=1e-08  Score=60.26  Aligned_cols=65  Identities=15%  Similarity=0.300  Sum_probs=51.2

Q ss_pred             cccceeEeeeeecccc-cCCCHHHHHH---HHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEee
Q 035170            3 LLNERTLKGTFFGNYK-PRSDLPSVVE---KYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~-~~~~~~~~i~---l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~   69 (71)
                      +.+++++.|++.+.+. ...+++++++   ++.+|+++  ++++++|||+|+++||+.+.+++ .+|+++.+
T Consensus       233 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          233 MRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELR--PVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             HHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTBC--CCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             HhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCcc--cccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            3578999998754221 1256889999   99999884  58999999999999999998765 47999864

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.72  E-value=2.2e-08  Score=60.01  Aligned_cols=65  Identities=15%  Similarity=0.188  Sum_probs=50.9

Q ss_pred             ccceeEeeeeecccc--cCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEeec
Q 035170            4 LNERTLKGTFFGNYK--PRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~--~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~~   70 (71)
                      .+++++.|++.+.+.  ....++++++++.+|++++...  .+|||+++++||+.+.+++ .+|+++.++
T Consensus       285 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  352 (357)
T 2zb4_A          285 ERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKET--VINGLENMGAAFQSMMTGGNIGKQIVCIS  352 (357)
T ss_dssp             HHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCEE--EEECGGGHHHHHHHHHTTCCSBEEEEECC
T ss_pred             cceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCccc--eecCHHHHHHHHHHHHcCCCCceEEEEEe
Confidence            478899998743221  1256899999999999987654  4589999999999998876 489999874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.72  E-value=1.4e-08  Score=61.42  Aligned_cols=62  Identities=23%  Similarity=0.444  Sum_probs=50.7

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~~   70 (71)
                      +.+++++.|++.+  .+ .+++++++++++|++++  .+ ++|||+|+++||+.+.+++ .+|+++.++
T Consensus       303 ~~~~~~i~g~~~~--~~-~~~~~~~~l~~~g~i~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  365 (369)
T 1uuf_A          303 IMKRRAIAGSMIG--GI-PETQEMLDFCAEHGIVA--DI-EMIRADQINEAYERMLRGDVKYRFVIDNR  365 (369)
T ss_dssp             HTTTCEEEECCSC--CH-HHHHHHHHHHHHHTCCC--CE-EEECGGGHHHHHHHHHTTCSSSEEEEEGG
T ss_pred             HhCCcEEEEeecC--CH-HHHHHHHHHHHhCCCCc--ce-EEEcHHHHHHHHHHHHcCCCceEEEEecC
Confidence            3578999998843  22 67899999999998865  45 5799999999999998876 489999874

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.69  E-value=2.1e-09  Score=64.30  Aligned_cols=65  Identities=12%  Similarity=0.231  Sum_probs=49.0

Q ss_pred             cccceeEeeeeeccccc------CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEee
Q 035170            3 LLNERTLKGTFFGNYKP------RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~------~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~   69 (71)
                      +.+++++.|++.+.+..      ...++++++++++|++  +++++++|||+|+++||+.+.++..+|++++|
T Consensus       279 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~gKvvl~p  349 (349)
T 3pi7_A          279 IFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRW--STDVTAVVPLAEAIAWVPAELTKPNGKVFIRP  349 (349)
T ss_dssp             HHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSC--CC-CCEEEEHHHHHHHHHHHHTSSSSCEEEEC
T ss_pred             hccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCc--ccccceEEcHHHHHHHHHHHhCCCCceEEEeC
Confidence            35889999988543210      2457888899999988  45899999999999999966666668999975

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.69  E-value=2.1e-08  Score=60.15  Aligned_cols=67  Identities=10%  Similarity=0.245  Sum_probs=48.0

Q ss_pred             ccceeEeeeeecccccC------C-CHHHHHHHHHcC-CCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEeec
Q 035170            4 LNERTLKGTFFGNYKPR------S-DLPSVVEKYMSK-ELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~------~-~~~~~i~l~~~g-~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~~   70 (71)
                      .+++++.|++.+.....      . .++++++++++| +++++++++++|||+++++||+.+.+++ .+|+++.++
T Consensus       278 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          278 FKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             HTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             hCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence            47899999874322100      0 123577889999 4455678999999999999999998766 479999874

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=98.68  E-value=2.4e-08  Score=60.17  Aligned_cols=61  Identities=13%  Similarity=0.263  Sum_probs=50.4

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +.+++++.|++.+  .. .+++++++++.+|++++  .+ ++|||+|+++||+.+.+++. +|+++.+
T Consensus       296 ~~~~~~i~g~~~~--~~-~~~~~~~~l~~~g~l~~--~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (366)
T 1yqd_A          296 IAGRKIVAGSGIG--GM-KETQEMIDFAAKHNITA--DI-EVISTDYLNTAMERLAKNDVRYRFVIDV  357 (366)
T ss_dssp             HTTTCEEEECCSC--CH-HHHHHHHHHHHHTTCCC--CE-EEECGGGHHHHHHHHHTTCCSSEEEECH
T ss_pred             HhCCcEEEEecCC--CH-HHHHHHHHHHHcCCCCC--ce-EEEcHHHHHHHHHHHHcCCcceEEEEEc
Confidence            4578999998843  22 57899999999999876  34 69999999999999988764 7999976

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.67  E-value=4.3e-08  Score=58.29  Aligned_cols=64  Identities=13%  Similarity=0.250  Sum_probs=50.3

Q ss_pred             ccceeEeeeeeccccc--CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170            4 LNERTLKGTFFGNYKP--RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~--~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      .+++++.|++.+.+..  ...++++++++++|++++...+  ++||+|+++||+.+.+++. +|+++++
T Consensus       270 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~--~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          270 VNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDI--VEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             HTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEE--EECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             hCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceee--ecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            5789999998543311  1567899999999999876544  5799999999999988765 7999874

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.66  E-value=4.5e-08  Score=58.14  Aligned_cols=64  Identities=14%  Similarity=0.273  Sum_probs=49.3

Q ss_pred             ccceeEeeeeeccccc---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEee
Q 035170            4 LNERTLKGTFFGNYKP---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~   69 (71)
                      .+++++.|++.+.+.+   ...++++++++++|++++...++  +||+|+++||+.+.+++ .+|+++.+
T Consensus       266 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~--~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          266 YKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVT--KGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             HTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEEEE--ECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             hcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccccc--cCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            5789999987443210   14577899999999998866554  69999999999998776 48999864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.61  E-value=1.4e-07  Score=56.28  Aligned_cols=49  Identities=10%  Similarity=0.194  Sum_probs=43.3

Q ss_pred             CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-e-eeEEEeec
Q 035170           21 SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-G-LRCIIRME   70 (71)
Q Consensus        21 ~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~-~kvvi~~~   70 (71)
                      .+++++++++++|++++.. ++++|||+|+++||+.+.+++ . +|+++.+.
T Consensus       282 ~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~  332 (340)
T 3gms_A          282 ETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVVQSAEKTKGKVFLTSY  332 (340)
T ss_dssp             HHHHHHHHHHHTTSSCCCC-EEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHcCCCcccc-ccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEe
Confidence            5688999999999998865 789999999999999999876 4 89999873

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=98.60  E-value=1.5e-07  Score=56.24  Aligned_cols=65  Identities=11%  Similarity=0.088  Sum_probs=49.7

Q ss_pred             ccceeEeeeeeccccc---------CCCHHHHHHHHHcCCCccccceeeee---ehhhHHHHHHHHhcCce-eeEEEeec
Q 035170            4 LNERTLKGTFFGNYKP---------RSDLPSVVEKYMSKELEVEKFITHTV---PFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~---------~~~~~~~i~l~~~g~~~~~~~it~~~---~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      .+++++.|++......         .+.++++++++++|+++  +.++++|   ||+++++||+.+.+++. +|+++.+.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~  338 (346)
T 3fbg_A          261 PKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQ--PTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLN  338 (346)
T ss_dssp             TTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSC--CCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC-
T ss_pred             ccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEE--CCccceecCCCHHHHHHHHHHHhcCCcceEEEEecC
Confidence            4788898876321100         13478899999999885  5788888   99999999999998875 89999874

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.58  E-value=1.2e-07  Score=56.87  Aligned_cols=64  Identities=13%  Similarity=0.149  Sum_probs=45.9

Q ss_pred             cccceeEeeeeecccccCCCHHHH----HHHHHcCCCccccceeeeeehhhHHHHHHH-HhcCc-eeeEEEee
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSV----VEKYMSKELEVEKFITHTVPFSEINKAFEY-MLRGE-GLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~----i~l~~~g~~~~~~~it~~~~l~~~~~a~~~-~~~~~-~~kvvi~~   69 (71)
                      +.+++++.|++.+.+.+ .++.++    .+++.+|++  +++++++|||+|+++||+. +.++. .+|+++.+
T Consensus       282 ~~~~~~i~g~~~~~~~~-~~~~~~~~~l~~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          282 MAKESSIIGVTLFSSTK-EEFQQYAAALQAGMEIGWL--KPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HTTTCEEEECCGGGCCH-HHHHHHHHHHHHHHHHTCC--CCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HhCCcEEEEEEeecCCH-HHHHHHHHHHHHHHHCCCc--cCccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            35789999986433332 345544    456778876  5689999999999999998 55544 58999864

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=98.57  E-value=4.5e-08  Score=58.53  Aligned_cols=65  Identities=18%  Similarity=0.185  Sum_probs=50.4

Q ss_pred             ccceeEeeeeeccc-----c---cCCCHHHHHHHHHcCCCcccccee-eeeehhhHHHHHHHHhcCc----e-eeEEEee
Q 035170            4 LNERTLKGTFFGNY-----K---PRSDLPSVVEKYMSKELEVEKFIT-HTVPFSEINKAFEYMLRGE----G-LRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~-----~---~~~~~~~~i~l~~~g~~~~~~~it-~~~~l~~~~~a~~~~~~~~----~-~kvvi~~   69 (71)
                      .+++++.|++....     .   ....++++++++++|+++  ++++ ++|||+|+++||+.+.+++    . +|+++++
T Consensus       258 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~  335 (343)
T 3gaz_A          258 FKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLA--PRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITV  335 (343)
T ss_dssp             HTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCC--CCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEEC
T ss_pred             hcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcc--cCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEe
Confidence            57899999873211     0   014688999999999885  5788 8999999999999988854    2 6999987


Q ss_pred             c
Q 035170           70 E   70 (71)
Q Consensus        70 ~   70 (71)
                      .
T Consensus       336 ~  336 (343)
T 3gaz_A          336 E  336 (343)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=98.54  E-value=8.6e-08  Score=57.54  Aligned_cols=64  Identities=16%  Similarity=0.329  Sum_probs=49.3

Q ss_pred             ccceeEeeeeeccc----cc---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEee
Q 035170            4 LNERTLKGTFFGNY----KP---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~----~~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~   69 (71)
                      .+++++.|++.+.+    .+   ...++++++++.+|++++  .+.++|||+|+++||+.+.+++ .+|+++++
T Consensus       286 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          286 FKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTA--PACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCC--CCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             hcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcC--ccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            47899999874321    11   134688999999999876  4568999999999999988766 47999874

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=98.54  E-value=1.7e-08  Score=59.71  Aligned_cols=65  Identities=11%  Similarity=0.151  Sum_probs=50.6

Q ss_pred             cccceeEeeeeeccccc---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeec
Q 035170            3 LLNERTLKGTFFGNYKP---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      +.+++++.|++.+...+   .+.++++++++++|++++  + +++|||+|+++||+.+.+++. +|++++++
T Consensus       256 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          256 ILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQ--A-ATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             HHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHH--H-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             hhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCC--C-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            35789999987432211   145788889999998754  5 899999999999999988775 79999874

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=98.50  E-value=2.7e-07  Score=55.67  Aligned_cols=47  Identities=26%  Similarity=0.394  Sum_probs=41.0

Q ss_pred             CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEee
Q 035170           21 SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRM   69 (71)
Q Consensus        21 ~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~   69 (71)
                      +.++++++++++|+++  ++++++|||+|+++||+.+.+++ .+|+++++
T Consensus       327 ~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          327 PCLDDIAELVDAGKIR--PVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHHHHHHHHCCCcc--cCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            4579999999999884  68999999999999999998876 47999976

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.48  E-value=3.6e-07  Score=54.18  Aligned_cols=44  Identities=14%  Similarity=0.053  Sum_probs=38.6

Q ss_pred             HHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEee
Q 035170           24 PSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRM   69 (71)
Q Consensus        24 ~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~   69 (71)
                      +++++++++|++++.  ++++|||+|+++||+.+.+++. +|+++.|
T Consensus       281 ~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          281 DELFDMLASGKLKVD--GIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHHHHHHTTSSCCC--CCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             HHHHHHHHCCCeeCc--cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            478999999999774  7899999999999999988775 7999875

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=98.47  E-value=9.5e-08  Score=57.33  Aligned_cols=66  Identities=14%  Similarity=0.138  Sum_probs=50.1

Q ss_pred             ccceeEeeeeecccc---c---CCCHHHHHHHHHcCCCccccceeeee-ehhhHHHHHHHHhcCc-eeeEEEee
Q 035170            4 LNERTLKGTFFGNYK---P---RSDLPSVVEKYMSKELEVEKFITHTV-PFSEINKAFEYMLRGE-GLRCIIRM   69 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~---~---~~~~~~~i~l~~~g~~~~~~~it~~~-~l~~~~~a~~~~~~~~-~~kvvi~~   69 (71)
                      .+++++.|++.+.+.   +   ...++++++++++|++++..+.++.+ +|+|+++||+.+.++. .+|+++.+
T Consensus       291 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          291 FKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             hcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            478999998743221   0   14688999999999998876666556 5679999999988765 58999874

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=98.46  E-value=4.4e-08  Score=58.10  Aligned_cols=65  Identities=15%  Similarity=0.173  Sum_probs=46.2

Q ss_pred             cccceeEeeeeeccccc---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEee
Q 035170            3 LLNERTLKGTFFGNYKP---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRM   69 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~   69 (71)
                      +.+++++.|++......   ...++.+++++.+|++  +++++++|||+|+++||+.+.+++ .+|+++++
T Consensus       262 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          262 ILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQL--LTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             HTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCS--TTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCc--ccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            35789999985211111   1234555666777876  468899999999999999998776 47999864

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=98.46  E-value=2.7e-07  Score=54.47  Aligned_cols=47  Identities=11%  Similarity=0.181  Sum_probs=40.8

Q ss_pred             CHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCceeeEEEeecC
Q 035170           22 DLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE   71 (71)
Q Consensus        22 ~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~~kvvi~~~~   71 (71)
                      .++++++++++|+++  ++++++|||+++++||+.+. +..+|+++++++
T Consensus       269 ~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~-~~~gKvvi~~~~  315 (315)
T 3goh_A          269 QGEALLTLIAQGKME--IAAPDIFRFEQMIEALDHSE-QTKLKTVLTLNE  315 (315)
T ss_dssp             HHHHHHHHHHTTSSC--CCCCEEEEGGGHHHHHHHHH-HHCCCEEEESCC
T ss_pred             HHHHHHHHHHCCCcc--cccceEecHHHHHHHHHHHH-hcCCcEEEEecC
Confidence            367899999999874  68999999999999999988 556899999864

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=98.43  E-value=2.7e-07  Score=55.59  Aligned_cols=65  Identities=12%  Similarity=0.100  Sum_probs=49.7

Q ss_pred             ccceeEeeeeecccc----c-----CCCHHHHHHHHHcCCCccccceeeee---ehhhHHHHHHHHhcCce-eeEEEeec
Q 035170            4 LNERTLKGTFFGNYK----P-----RSDLPSVVEKYMSKELEVEKFITHTV---PFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~----~-----~~~~~~~i~l~~~g~~~~~~~it~~~---~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      .+++++.|++.+...    +     ...++++++++++|++++  .+++++   ||+++++||+.+.+++. +|+++++.
T Consensus       282 ~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~  359 (363)
T 4dvj_A          282 RKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRT--TLTNRLSPINAANLKQAHALVESGTARGKVVIEGF  359 (363)
T ss_dssp             TTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCC--CEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECS
T ss_pred             hccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeec--cccceecCCCHHHHHHHHHHHHhCCCceEEEEeCc
Confidence            578899987633210    0     134788999999998864  677666   99999999999988875 79999874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=98.43  E-value=1.5e-07  Score=57.06  Aligned_cols=65  Identities=9%  Similarity=0.138  Sum_probs=47.5

Q ss_pred             cccceeEeeeeeccc----ccCCC----HHHHHHHHHcCCCccccceeeeeehhhH--HHHHHHHhcCc-eeeEEEeecC
Q 035170            3 LLNERTLKGTFFGNY----KPRSD----LPSVVEKYMSKELEVEKFITHTVPFSEI--NKAFEYMLRGE-GLRCIIRMEE   71 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~----~~~~~----~~~~i~l~~~g~~~~~~~it~~~~l~~~--~~a~~~~~~~~-~~kvvi~~~~   71 (71)
                      +.+++++.|++.+.+    .+ ..    ++.+++++.+ .  +.++++++|||+|+  ++||+.+.+++ .+|+++++++
T Consensus       300 ~~~~~~i~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~--l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~  375 (379)
T 3iup_A          300 FGMAWGMGGWLLFPFLQKIGR-ERANALKQRVVAELKT-T--FASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINPNK  375 (379)
T ss_dssp             SCSCEEEEECCHHHHHHHHCH-HHHHHHHHHHHHTTTT-T--TCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred             cccceEEEEEEeeeecccCCH-HHHHHHHHHHHHHHhc-c--CCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeCCC
Confidence            457889999875543    11 22    3555566666 3  46689999999999  99999998875 4899999853

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.28  E-value=1.6e-06  Score=51.29  Aligned_cols=47  Identities=11%  Similarity=0.116  Sum_probs=40.1

Q ss_pred             CCHHHHHHHHHcCCCcccccee--eeeehhhHHHHHHHHhcCc-eeeEEEee
Q 035170           21 SDLPSVVEKYMSKELEVEKFIT--HTVPFSEINKAFEYMLRGE-GLRCIIRM   69 (71)
Q Consensus        21 ~~~~~~i~l~~~g~~~~~~~it--~~~~l~~~~~a~~~~~~~~-~~kvvi~~   69 (71)
                      ..++++++++++|++++  .++  ++|||+|+++||+.+.+++ .+|+++.+
T Consensus       278 ~~~~~~~~l~~~g~l~~--~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          278 EASNELFSLIASGVIKV--DVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHHHHHHHHTTSSCC--CCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHHHHHHHHCCCccc--ccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            34788999999998864  788  9999999999999998765 47999864

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=98.17  E-value=5.6e-07  Score=53.32  Aligned_cols=63  Identities=21%  Similarity=0.283  Sum_probs=43.1

Q ss_pred             ccceeEeeeeeccccc---CCCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCc-eeeEEEeec
Q 035170            4 LNERTLKGTFFGNYKP---RSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGE-GLRCIIRME   70 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~---~~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~-~~kvvi~~~   70 (71)
                      .+++++.|+.......   ...++.+++++.+| +  +++ +++|||+|+++||+.+.+++ .+|++++++
T Consensus       262 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l--~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          262 LRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-L--ERI-AQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             HTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-H--HHH-EEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             hcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-C--cee-eeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            5789999974211111   12345555666666 5  344 68999999999999998776 479999763

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.02  E-value=1.5e-05  Score=52.58  Aligned_cols=48  Identities=15%  Similarity=0.177  Sum_probs=41.4

Q ss_pred             CCHHHHHHHHHcCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeec
Q 035170           21 SDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus        21 ~~~~~~i~l~~~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      +.+.++++++++|++++  +++++|||+|+++||+.+.+++. +|+|+.+.
T Consensus       476 ~~l~~~~~l~~~g~l~p--~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~  524 (795)
T 3slk_A          476 EMLHELVELFEGRVLEP--LPVTAWDVRQAPEALRHLSQARHVGKLVLTMP  524 (795)
T ss_dssp             HHHHHHHHHHHTTSCCC--CCEEEEEGGGHHHHHHHHHHTCCCBEEEEECC
T ss_pred             HHHHHHHHHHHcCCcCC--CcceeEcHHHHHHHHHHHhcCCccceEEEecC
Confidence            45788999999998854  78899999999999999988775 79999863

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=97.53  E-value=0.00015  Score=52.63  Aligned_cols=66  Identities=18%  Similarity=0.336  Sum_probs=47.7

Q ss_pred             cccceeEeeeeecccc--cCCCHHHHHHHHH----cCCCccccceeeeeehhhHHHHHHHHhcCce-eeEEEeec
Q 035170            3 LLNERTLKGTFFGNYK--PRSDLPSVVEKYM----SKELEVEKFITHTVPFSEINKAFEYMLRGEG-LRCIIRME   70 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~--~~~~~~~~i~l~~----~g~~~~~~~it~~~~l~~~~~a~~~~~~~~~-~kvvi~~~   70 (71)
                      +.+++++.|+..+...  ....+.++++++.    +|.+  .++++++||++++++||+.+.+++. +|+++.++
T Consensus      1785 ~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l--~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~ 1857 (2512)
T 2vz8_A         1785 FLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVV--QPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVR 1857 (2512)
T ss_dssp             GGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCS--CCCCEEEEESSTHHHHHHHHHTTCCSSEEEEECS
T ss_pred             cccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCc--CCCcceEecHHHHHHHHHhhhccCccceEEEECC
Confidence            4578899998643221  1134666676654    5655  4588999999999999999988765 79999763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	71
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	6e-11
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-09
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-08
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	2e-08
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	5e-08
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-07
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	1e-06

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 6e-11
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSK 33
           M L   RT KG  FG  K R D+P +V ++++K
Sbjct: 144 MLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 48.4 bits (114), Expect = 2e-09
 Identities = 11/34 (32%), Positives = 23/34 (67%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE 34
           ++++  R++ GTFFG +K    +P++V  Y +K+
Sbjct: 141 VDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKK 174

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 46.5 bits (109), Expect = 1e-08
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE 34
             L+  RT KGT FG +K    +P +V +YMSK+
Sbjct: 143 FQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 46.1 bits (108), Expect = 2e-08
 Identities = 14/34 (41%), Positives = 22/34 (64%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE 34
           M LL+ RT KG  FG +K +  +P +V  +M+K+
Sbjct: 143 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 44.6 bits (104), Expect = 5e-08
 Identities = 12/34 (35%), Positives = 22/34 (64%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE 34
           + L+  RT KG+ FG +K +  +P +V+ Y+ K+
Sbjct: 142 IQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 43.7 bits (102), Expect = 1e-07
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 1   MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE 34
           + LL  R+LKG+ FG +K   ++  +V+ YM K+
Sbjct: 142 LLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKK 174

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 41.0 bits (95), Expect = 1e-06
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 3   LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE 34
           LL  +T+ G   G+  P+  +P +V  Y   +
Sbjct: 143 LLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	71
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.49
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.43
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.31
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.29
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	97.27
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.08
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.01
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.0
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.68
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.4
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.38
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.36
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.35
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.98
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.72
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	93.71
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	87.35
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	86.45
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	81.39

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.49  E-value=1.1e-05  Score=42.85  Aligned_cols=32  Identities=28%  Similarity=0.490  Sum_probs=26.9

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE   34 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~   34 (71)
                      ++++++++||++|++.++++++++++++++|+
T Consensus       143 ~~k~~~i~Gs~~g~~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         143 LLGGKTILGVVEGSGSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             HHTTCEEEECSGGGSCHHHHHHHHHHHHHTTS
T ss_pred             HHCCCEEEEEEecCCChHHHHHHHHHHHHcCC
Confidence            46899999999887665578999999999985

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.43  E-value=3.5e-05  Score=40.96  Aligned_cols=31  Identities=42%  Similarity=0.859  Sum_probs=26.1

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE   34 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~   34 (71)
                      +.++++|+||++|++.+ ++++++++++.+|+
T Consensus       144 ~~~~~~i~Gs~~G~~~~-~d~~~lidl~~~gK  174 (174)
T d1p0fa2         144 LLTGRSLKGSVFGGFKG-EEVSRLVDDYMKKK  174 (174)
T ss_dssp             HHTTCEEEECSGGGCCG-GGHHHHHHHHHTTS
T ss_pred             HhCCCEEEEEEeCCCCH-HHHHHHHHHHHcCC
Confidence            45789999999887765 68999999999885

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=9.1e-05  Score=38.95  Aligned_cols=30  Identities=27%  Similarity=0.499  Sum_probs=25.4

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCc
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELE   36 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~   36 (71)
                      +.|+++++||+  ++.  ++|+++++++++|++|
T Consensus       142 ~~k~l~i~Gs~--~~~--~~~~~al~li~~gkid  171 (171)
T d1pl8a2         142 AIREVDIKGVF--RYC--NTWPVAISMLASKSVN  171 (171)
T ss_dssp             HHTTCEEEECC--SCS--SCHHHHHHHHHTTSCC
T ss_pred             HHCCcEEEEEe--CCH--hHHHHHHHHHHcCCCC
Confidence            46899999998  442  7899999999999885

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.29  E-value=2.2e-05  Score=41.53  Aligned_cols=32  Identities=41%  Similarity=0.859  Sum_probs=27.1

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE   34 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~   34 (71)
                      +.++++|+||++|++.++++++++++++.+|+
T Consensus       145 ~~~~~~i~Gs~~G~~~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         145 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHTTCEEEECSGGGCCHHHHHHHHHHHHHTTS
T ss_pred             HhCCCEEEEEEEeCCCHHHHHHHHHHHHHCcC
Confidence            45899999999887766678999999999885

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=97.27  E-value=2.9e-05  Score=40.96  Aligned_cols=32  Identities=38%  Similarity=0.832  Sum_probs=26.5

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE   34 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~   34 (71)
                      +.++++|+||+.|++.++++++++++++.+|+
T Consensus       144 ~~~~~~i~Gs~~G~~~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         144 LIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHTTCEEEECSGGGCCHHHHHHHHHHHHHTTS
T ss_pred             HHCCcEEEEEEEeCCcHHHHHHHHHHHHHcCC
Confidence            45788999999887765678999999999885

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.08  E-value=5.9e-05  Score=39.65  Aligned_cols=32  Identities=47%  Similarity=0.804  Sum_probs=26.3

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE   34 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~   34 (71)
                      +.++++|+|+++|++.+.++++++++++++|+
T Consensus       145 ~~~~~~i~Gs~~G~~~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         145 LVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHTTCEEEECSGGGCCHHHHHHHHHHHHHTTS
T ss_pred             HHCCCEEEEEeeeCCcHHHHHHHHHHHHHcCC
Confidence            45788999999887765578999999999885

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.01  E-value=7.5e-05  Score=39.72  Aligned_cols=31  Identities=35%  Similarity=0.790  Sum_probs=25.0

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCC
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKE   34 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~   34 (71)
                      ..+++|+||++|++.+..+++++++++.+|+
T Consensus       144 ~~~k~i~Gs~~Gs~~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         144 ILGRSINGTFFGGWKSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HTTCEEEECSGGGCCHHHHHHHHHHHHHTTS
T ss_pred             hccCEEEEEEeeCCChHHHHHHHHHHHHCcC
Confidence            4567899999887766678899999998875

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.00  E-value=0.00012  Score=38.41  Aligned_cols=31  Identities=13%  Similarity=0.251  Sum_probs=25.8

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCc
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELE   36 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~   36 (71)
                      ++|+++|.||++|+.   ++++++++++++|+++
T Consensus       138 ~~k~~~i~Gs~~g~~---~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         138 GLKAVSISYSALGSI---KELNQLLKLVSEKDIK  168 (168)
T ss_dssp             GCBSCEEEECCCCCH---HHHHHHHHHHHHTTCC
T ss_pred             HhCCcEEEEEeeCCH---HHHHHHHHHHHhCCCC
Confidence            568999999996642   6899999999999873

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.68  E-value=0.00019  Score=37.72  Aligned_cols=29  Identities=21%  Similarity=0.393  Sum_probs=22.7

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE   34 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~   34 (71)
                      ++|+++|+||+.++  + .+++++++++++|+
T Consensus       144 ~~k~~~i~Gs~~~~--~-~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         144 ISSEVSFEGSLVGN--Y-VELHELVTLALQGK  172 (172)
T ss_dssp             HHTTCEEEECCSCC--H-HHHHHHHHHHHTTS
T ss_pred             HhCCcEEEEEEecC--H-HHHHHHHHHHHcCC
Confidence            46889999998543  3 67899999999885

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.40  E-value=0.0014  Score=34.02  Aligned_cols=28  Identities=29%  Similarity=0.390  Sum_probs=22.4

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE   34 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~   34 (71)
                      +.|+++|+|++  .+.  ++|+++++++++|+
T Consensus       143 ~~k~i~i~gs~--~~~--~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         143 CAREIDIKSVF--RYC--NDYPIALEMVASGR  170 (170)
T ss_dssp             HTTTCEEEECC--SCS--SCHHHHHHHHHTTS
T ss_pred             HHCCCEEEEEE--CCH--HHHHHHHHHHHcCC
Confidence            45899999987  332  68999999999885

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.38  E-value=0.00033  Score=37.15  Aligned_cols=30  Identities=40%  Similarity=0.821  Sum_probs=24.0

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHc
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMS   32 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~   32 (71)
                      ++++++++||++|++.++++++++++++.+
T Consensus       146 ~~~~~~i~Gs~~G~~~~~~dip~li~~~~~  175 (176)
T d1d1ta2         146 LFTGRTWKGCVFGGLKSRDDVPKLVTEFLA  175 (176)
T ss_dssp             HHTTCEEEECSGGGCCHHHHHHHHHHHHTT
T ss_pred             HhCCCEEEEEEEeCCCcHHHHHHHHHHHhC
Confidence            456889999998877767889988888754

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.36  E-value=0.00048  Score=35.96  Aligned_cols=29  Identities=21%  Similarity=0.340  Sum_probs=22.2

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKE   34 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~   34 (71)
                      ++|+++++|++.+  ++ .+++++++++++|+
T Consensus       142 ~~k~i~i~Gs~~~--~~-~d~~~~l~lv~~GK  170 (170)
T d1jvba2         142 TLSEIQFVGSLVG--NQ-SDFLGIMRLAEAGK  170 (170)
T ss_dssp             HHHTCEEEECCSC--CH-HHHHHHHHHHHTTS
T ss_pred             HhCCcEEEEEecC--CH-HHHHHHHHHHHcCC
Confidence            4578899998843  33 67888999988885

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.35  E-value=0.00065  Score=35.19  Aligned_cols=31  Identities=23%  Similarity=0.402  Sum_probs=24.0

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCCc
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELE   36 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~~   36 (71)
                      +.++++++|++++  + +++++++++++++|+++
T Consensus       138 ~~~~~~i~gs~~~--~-~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         138 VLNGIKIIGSIVG--T-RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             HHTTCEEEECCSC--C-HHHHHHHHHHHHTTSCC
T ss_pred             HHCCcEEEEEeeC--C-HHHHHHHHHHHHhCCCC
Confidence            4688999998843  2 26799999999999863

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.98  E-value=0.00084  Score=34.83  Aligned_cols=28  Identities=18%  Similarity=0.302  Sum_probs=22.0

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSK   33 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g   33 (71)
                      +.|+++|+||+.+  ++ ++++++++++++|
T Consensus       138 ~~k~~~i~Gs~~~--~~-~d~~e~l~l~~~G  165 (166)
T d1llua2         138 VLKGLHIAGSIVG--TR-ADLQEALDFAGEG  165 (166)
T ss_dssp             HHTTCEEEECCSC--CH-HHHHHHHHHHHTT
T ss_pred             HhCCcEEEEEeec--CH-HHHHHHHHHHHCc
Confidence            4589999999844  32 6789999999887

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.72  E-value=0.001  Score=34.70  Aligned_cols=30  Identities=10%  Similarity=0.401  Sum_probs=20.9

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcCCC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSKEL   35 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~~   35 (71)
                      +.++++|.||+.|+   ..+++++++++++++|
T Consensus       139 ~~k~~~i~Gs~~~~---~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         139 IMKRRAIAGSMIGG---IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             HTTTCEEEECCSCC---HHHHHHHHHHHHHHTC
T ss_pred             HHCCcEEEEEeecC---HHHHHHHHHHHHHcCC
Confidence            35788888887543   2667888888877653

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=93.71  E-value=0.0079  Score=31.48  Aligned_cols=28  Identities=21%  Similarity=0.296  Sum_probs=20.8

Q ss_pred             cccceeEeeeeecccccCCCHHHHHHHHHcC
Q 035170            3 LLNERTLKGTFFGNYKPRSDLPSVVEKYMSK   33 (71)
Q Consensus         3 ~~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g   33 (71)
                      ++|+++++|++.  +++ +++++++++++++
T Consensus       148 ~~k~l~i~G~~~--~~~-~~~~~~~~~i~~~  175 (182)
T d1vj0a2         148 VLKNATFKGIWV--SDT-SHFVKTVSITSRN  175 (182)
T ss_dssp             TTTTCEEEECCC--CCH-HHHHHHHHHHHTC
T ss_pred             HHCCcEEEEEEe--CCH-HHHHHHHHHHHHC
Confidence            467888998884  333 6788888888876

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=87.35  E-value=0.11  Score=26.93  Aligned_cols=29  Identities=14%  Similarity=0.196  Sum_probs=20.8

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcCC
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKE   34 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g~   34 (71)
                      .+++++.|+.+++.  +..++++++++..|+
T Consensus       146 ~~~~~i~g~~~~~~--r~~~e~l~~li~~gk  174 (174)
T d1jqba2         146 MAHKTIKGGLCPGG--RLRAERLRDMVVYNR  174 (174)
T ss_dssp             TBCCEEEEBCCCCH--HHHHHHHHHHHHTTS
T ss_pred             hCccEEEEecCCCC--cccHHHHHHHHHcCC
Confidence            46789999875543  245677888998875

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.45  E-value=0.08  Score=27.21  Aligned_cols=29  Identities=7%  Similarity=0.087  Sum_probs=14.7

Q ss_pred             ccceeEeeeeecccccCCCHHHHHHHHHcC
Q 035170            4 LNERTLKGTFFGNYKPRSDLPSVVEKYMSK   33 (71)
Q Consensus         4 ~~~~~i~Gs~~g~~~~~~~~~~~i~l~~~g   33 (71)
                      .|+++++|++.++..+ ++++++++++.+|
T Consensus       141 ~k~~~i~g~~~~~~~~-~~~~~~~~~l~~g  169 (174)
T d1yb5a2         141 AKESSIIGVTLFSSTK-EEFQQYAAALQAG  169 (174)
T ss_dssp             TTTCEEEECCGGGCCH-HHHHHHHHHHHHH
T ss_pred             HCCCEEEEEEecCCCH-HHHHHHHHHHHHH
Confidence            4566666665333222 4455555555543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=81.39  E-value=0.17  Score=26.09  Aligned_cols=11  Identities=18%  Similarity=-0.103  Sum_probs=4.0

Q ss_pred             eeehhhHHHHH
Q 035170           44 TVPFSEINKAF   54 (71)
Q Consensus        44 ~~~l~~~~~a~   54 (71)
                      .++-+..++++
T Consensus       162 ~~~~~~~~~~~  172 (182)
T d1v3va2         162 RWQGDVREKAL  172 (182)
T ss_dssp             GCCHHHHHHHH
T ss_pred             ccChHHHHHHH
Confidence            33333333333