Citrus Sinensis ID: 035269

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------7
Protein Sequence
MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYMG
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHcccEEEEEcccccEEEEEccEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHcccEEEEEcccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHccEEEcc
Coil and Loop (DISEMBL)
MKDWAPIVIGLLLFILLspgllfqlpgnhrhfefgsfatnGKAVLVHTLIFFGIYTILILAVGIHIYMG
Flexible Loop (DISEMBL)
MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYMG
Low Complexity Region (SEG)
MKDWApiviglllfillspgllfqlpgNHRHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYMG
Disordered region (IsUnstruct)
***WAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIY**
Disordered Region (DISOPRED)
*KDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYMG
Disordered Region (DISEMBL)
MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYMG
Disordered Region (DISPRO)
*KDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYMG
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooo
Transmembrane Helix (MEMSAT)
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYMG
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
449441702	142	PREDICTED: uncharacterized protein LOC10	1.0	0.485	0.710	3e-21
224133990	69	predicted protein [Populus trichocarpa]	1.0	1.0	0.710	9e-21
357149139	69	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.695	1e-20
224055753	69	predicted protein [Populus trichocarpa]	1.0	1.0	0.695	2e-20
15232064	142	uncharacterized protein [Arabidopsis tha	1.0	0.485	0.666	4e-20
356571547	69	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.652	1e-19
224129052	69	predicted protein [Populus trichocarpa]	1.0	1.0	0.666	1e-19
297818258	142	hypothetical protein ARALYDRAFT_322830 [	1.0	0.485	0.652	1e-19
356573089	105	PREDICTED: uncharacterized protein LOC10	1.0	0.657	0.637	2e-19
356561806	69	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.637	7e-19

>gi|449441702|ref|XP_004138621.1| PREDICTED: uncharacterized protein LOC101211888 [Cucumis sativus] gi|449531380|ref|XP_004172664.1| PREDICTED: uncharacterized LOC101211888 [Cucumis sativus]

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 58/69 (84%)

Query: 1   MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILIL 60
           M DWAP+VIG++LF+LLSPGLLFQ PGN+R FEFGS  TNGKAV +HTLIFF +Y + IL
Sbjct: 74  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 133

Query: 61  AVGIHIYMG 69
           A+ IHIY G
Sbjct: 134 ALHIHIYTG 142

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133990|ref|XP_002321709.1| predicted protein [Populus trichocarpa] gi|222868705|gb|EEF05836.1| predicted protein [Populus trichocarpa]

 Score =  103 bits (258), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 59/69 (85%)

Query: 1  MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILIL 60
          M DWAPI++G +LFILLSPGLLFQ+PG  R+ EF SF TNGKA++VHTLIFF ++TILIL
Sbjct: 1  MADWAPILLGFVLFILLSPGLLFQVPGTTRNLEFSSFTTNGKAIVVHTLIFFVVFTILIL 60

Query: 61 AVGIHIYMG 69
          A+GI IY G
Sbjct: 61 ALGIRIYTG 69

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357149139|ref|XP_003575013.1| PREDICTED: uncharacterized protein LOC100827089 [Brachypodium distachyon]

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 59/69 (85%)

Query: 1  MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILIL 60
          M DW P+VIG++LFILLSPGLLF++PG+HRH +FGSF TNGKA+ +HTLIFF  +TIL L
Sbjct: 1  MADWGPVVIGVVLFILLSPGLLFEIPGSHRHVDFGSFRTNGKAIFIHTLIFFAAFTILTL 60

Query: 61 AVGIHIYMG 69
          A+ IHIY G
Sbjct: 61 ALHIHIYAG 69

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224055753|ref|XP_002298636.1| predicted protein [Populus trichocarpa] gi|222845894|gb|EEE83441.1| predicted protein [Populus trichocarpa]

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 1  MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILIL 60
          M DW P+VIG++LF+LL PGLLFQLPGN++H +FGS  TNGKA+ VHTLIFF  Y ILIL
Sbjct: 1  MADWGPVVIGVVLFVLLQPGLLFQLPGNNKHVDFGSLKTNGKAIAVHTLIFFTAYAILIL 60

Query: 61 AVGIHIYMG 69
          AV +HIY G
Sbjct: 61 AVHVHIYTG 69

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15232064|ref|NP_189339.1| uncharacterized protein [Arabidopsis thaliana] gi|332643737|gb|AEE77258.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  101 bits (252), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 58/69 (84%)

Query: 1   MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILIL 60
           M DWAP+++G++LF++LSPGLLF LPGN+R  +FG   TNGKA+ VHTLIFF IYTILIL
Sbjct: 74  MADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTILIL 133

Query: 61  AVGIHIYMG 69
           A+ +HIY G
Sbjct: 134 ALNLHIYTG 142

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571547|ref|XP_003553938.1| PREDICTED: uncharacterized protein LOC100795123 [Glycine max]

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 56/69 (81%)

Query: 1  MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILIL 60
          M DWAP++IG++LF+LL PGLLF  PGN +  EFGS  TNGKA+ +HTLIFF +Y+ILIL
Sbjct: 1  MADWAPVLIGVVLFVLLQPGLLFSFPGNGKQLEFGSMKTNGKAIFIHTLIFFALYSILIL 60

Query: 61 AVGIHIYMG 69
          AV +HIY G
Sbjct: 61 AVKVHIYTG 69

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129052|ref|XP_002328878.1| predicted protein [Populus trichocarpa] gi|222839308|gb|EEE77645.1| predicted protein [Populus trichocarpa]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 56/69 (81%)

Query: 1  MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILIL 60
          M DW P++IG++LF+LL+PGLLFQLPGN +  EFGS  TNG AV VHTLIFF +Y +LIL
Sbjct: 1  MADWGPVLIGVVLFVLLTPGLLFQLPGNSKQVEFGSLKTNGMAVAVHTLIFFAVYAVLIL 60

Query: 61 AVGIHIYMG 69
          AV +HIY G
Sbjct: 61 AVHVHIYTG 69

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297818258|ref|XP_002877012.1| hypothetical protein ARALYDRAFT_322830 [Arabidopsis lyrata subsp. lyrata] gi|297322850|gb|EFH53271.1| hypothetical protein ARALYDRAFT_322830 [Arabidopsis lyrata subsp. lyrata]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 58/69 (84%)

Query: 1   MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILIL 60
           M DWAP+++G++LF++LSPGLLF LPGN+R  +FG   TNGKA+ VHTLIFF IY+ILIL
Sbjct: 74  MADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYSILIL 133

Query: 61  AVGIHIYMG 69
           A+ +HIY G
Sbjct: 134 ALNLHIYTG 142

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573089|ref|XP_003554697.1| PREDICTED: uncharacterized protein LOC100799722 [Glycine max]

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 53/69 (76%)

Query: 1  MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILIL 60
          M DWAP++IG++LF+LL PGLLF  PGN    EFGS  TNGKA+ +HTLIFF +Y +LIL
Sbjct: 1  MSDWAPVLIGVVLFVLLQPGLLFSFPGNREQLEFGSMKTNGKAIFIHTLIFFALYYVLIL 60

Query: 61 AVGIHIYMG 69
          AV IHIY  
Sbjct: 61 AVKIHIYTS 69

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356561806|ref|XP_003549169.1| PREDICTED: uncharacterized protein LOC100816029 [Glycine max]

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 55/69 (79%)

Query: 1  MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILIL 60
          M DWA ++IG++LF+LL PGLLF  PGN +  EFGS  TNGKA+ +HTLIFF +Y++LIL
Sbjct: 1  MADWATVLIGVVLFVLLQPGLLFSFPGNGKQLEFGSMKTNGKAIFIHTLIFFALYSVLIL 60

Query: 61 AVGIHIYMG 69
          AV IHIY G
Sbjct: 61 AVKIHIYTG 69

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
TAIR|locus:2091985	142	AT3G27030 "AT3G27030" [Arabido	1.0	0.485	0.463	5.8e-11
TAIR|locus:2162991	69	AT5G40970 "AT5G40970" [Arabido	1.0	1.0	0.434	1.4e-09
TAIR|locus:2114550	89	AT3G48660 "AT3G48660" [Arabido	0.579	0.449	0.525	1.4e-07
TAIR|locus:2167341	69	AT5G63500 "AT5G63500" [Arabido	0.579	0.579	0.5	2.3e-07
TAIR|locus:2174663	70	AT5G14110 "AT5G14110" [Arabido	0.521	0.514	0.555	6.1e-07
TAIR|locus:2078618	70	AT3G01950 "AT3G01950" [Arabido	0.507	0.5	0.514	2.6e-06
TAIR|locus:4515103540	69	AT5G08391 "AT5G08391" [Arabido	0.579	0.579	0.425	3.4e-06
TAIR|locus:2163006	69	AT5G40980 "AT5G40980" [Arabido	0.550	0.550	0.526	3.4e-06
TAIR|locus:4515103138	69	AT3G27027 "AT3G27027" [Arabido	0.550	0.550	0.526	5.5e-06
TAIR|locus:2078628	70	AT3G01940 "AT3G01940" [Arabido	0.565	0.557	0.461	1.1e-05

TAIR|locus:2091985 AT3G27030 "AT3G27030" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 32/69 (46%), Positives = 37/69 (53%)

Query:     1 MKDWAXXXXXXXXXXXXXXXXXXXXXXNHRHFEFGSFATNGKAVLVHTLIFFGIYTILIL 60
             M DWA                      N+R  +FG   TNGKA+ VHTLIFF IYTILIL
Sbjct:    74 MADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTILIL 133

Query:    61 AVGIHIYMG 69
             A+ +HIY G
Sbjct:   134 ALNLHIYTG 142

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2162991 AT5G40970 "AT5G40970" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 30/69 (43%), Positives = 34/69 (49%)

Query:     1 MKDWAXXXXXXXXXXXXXXXXXXXXXXNHRHFEFGSFATNGKAVLVHTLIFFGIYTILIL 60
             M DWA                      +H   +FG   TNGKA+ VHTLIFF  YTILIL
Sbjct:     1 MADWAPVLVGVVLFVILSPGLLFSLPGHHHTLQFGGMKTNGKAIAVHTLIFFAAYTILIL 60

Query:    61 AVGIHIYMG 69
             AV +HI  G
Sbjct:    61 AVNLHITTG 69

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2114550 AT3G48660 "AT3G48660" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 21/40 (52%), Positives = 30/40 (75%)

Query:    30 RHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYMG 69
             R  EFG+  T+G ++LVHT+IFFG+ TI  +A+ +HIY G
Sbjct:    30 RVVEFGNMQTSGASILVHTIIFFGLITIFTIAIRLHIYTG 69

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2167341 AT5G63500 "AT5G63500" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 20/40 (50%), Positives = 29/40 (72%)

Query:    30 RHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYMG 69
             R  EFG+  T+G ++LVH +IFFG+ TI  +A+ +HIY G
Sbjct:    30 RVVEFGNMQTSGASILVHAIIFFGLITIFTIAINVHIYSG 69

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2174663 AT5G14110 "AT5G14110" [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query:    33 EFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYM 68
             EFG F T+G A+++HTLIFF   T+ I+A+ IHIY+
Sbjct:    34 EFGGFQTSGAAIVIHTLIFFACITVSIIALHIHIYV 69

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2078618 AT3G01950 "AT3G01950" [Arabidopsis thaliana (taxid:3702)]

 Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 18/35 (51%), Positives = 27/35 (77%)

Query:    33 EFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIY 67
             EFG F T+G ++++HTL+FF   TI ++A+ IHIY
Sbjct:    34 EFGGFQTSGPSIVIHTLLFFAFITISLIALHIHIY 68

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:4515103540 AT5G08391 "AT5G08391" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 17/40 (42%), Positives = 31/40 (77%)

Query:    30 RHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYMG 69
             ++ EFG+F T+  +V+VH+L++F +  + +LA+ IHIY+G
Sbjct:    30 KYVEFGNFQTSAVSVIVHSLLYFSLVCVFLLALKIHIYIG 69

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2163006 AT5G40980 "AT5G40980" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 20/38 (52%), Positives = 30/38 (78%)

Query:    30 RHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIY 67
             R  EFG+ +T+G ++LVH +I+F I TILI+A+ IHI+
Sbjct:    31 RVMEFGNMSTSGISILVHAIIYFCILTILIIAIQIHIH 68

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:4515103138 AT3G27027 "AT3G27027" [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 20/38 (52%), Positives = 28/38 (73%)

Query:    30 RHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIY 67
             R  EFG+  T+G A+LVH  I+F I TIL++A+ IHI+
Sbjct:    31 RVVEFGNMTTSGIAILVHAFIYFCILTILVIAIQIHIH 68

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2078628 AT3G01940 "AT3G01940" [Arabidopsis thaliana (taxid:3702)]

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 18/39 (46%), Positives = 29/39 (74%)

Query:    30 RHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYM 68
             R  E G+  T+G ++LVH ++FF I TIL++A+ IHI++
Sbjct:    32 RVLECGNMTTSGISILVHAILFFAIITILVIAIQIHIHI 70


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.335   0.148   0.483    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       69        47   0.00091  102 3  11 21  0.40    26
                                                     29  0.47    25


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  452 (48 KB)
  Total size of DFA:  79 KB (2064 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  5.65u 0.17s 5.82t   Elapsed:  00:00:00
  Total cpu time:  5.65u 0.17s 5.82t   Elapsed:  00:00:00
  Start:  Fri May 10 06:57:38 2013   End:  Fri May 10 06:57:38 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	69
pfam11820	68	pfam11820, DUF3339, Protein of unknown function (D	8e-28

>gnl|CDD|192844 pfam11820, DUF3339, Protein of unknown function (DUF3339)

 Score = 94.3 bits (235), Expect = 8e-28
 Identities = 39/67 (58%), Positives = 56/67 (83%)

Query: 1  MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILIL 60
          M DW P+++ ++LF+LLSPGLLFQLPG +R  EFG+  T+GK++LVHTL+FF + TI ++
Sbjct: 1  MADWGPVLVAVVLFVLLSPGLLFQLPGRNRVVEFGNMQTSGKSILVHTLLFFALITIFLV 60

Query: 61 AVGIHIY 67
          A+G+HIY
Sbjct: 61 ALGVHIY 67

This family of proteins are functionally uncharacterized. This family is found in eukaryotes. Proteins in this family are about 70 amino acids in length. Length = 68

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	69
PF11820	68	DUF3339: Protein of unknown function (DUF3339); In	100.0
COG2864	218	FdnI Cytochrome b subunit of formate dehydrogenase	82.0

>PF11820 DUF3339: Protein of unknown function (DUF3339); InterPro: IPR021775 This family of proteins are functionally uncharacterised

Probab=100.00  E-value=5.6e-47  Score=238.05  Aligned_cols=68  Identities=59%  Similarity=1.207  Sum_probs=67.4

Q ss_pred             CCCchHHHHHHHHHHHhccceeEEecCCCceeeeeCccchHHHHHHHHHHHHHHHHHHHHHHhheecc
Q 035269            1 MKDWAPIVIGLLLFILLSPGLLFQLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYM   68 (69)
Q Consensus         1 M~DWgpV~i~vvLFvlLsPGLLfQ~PG~~r~veFgn~~Tsg~si~vHalifF~l~~if~~ai~vHiy~   68 (69)
                      |+|||||+|+++||++||||||||+|||+|++|||||||||+||+|||++||+++++|++|+++|+|+
T Consensus         1 M~DWgpv~i~vvLFvlLsPGLLfqlPG~~r~veFgn~~Tsg~si~vHa~iff~l~~i~~va~~vhiy~   68 (68)
T PF11820_consen    1 MADWGPVLIAVVLFVLLSPGLLFQLPGRGRVVEFGNMKTSGKSILVHALIFFALFTIFLVAIGVHIYT   68 (68)
T ss_pred             CCcchhHHHHHHHHHHhCCceEEEecCCCceEEEcCCcchHHHHHHHHHHHHHHHHHHHHHheeEeeC
Confidence            89999999999999999999999999999999999999999999999999999999999999999996

This family is found in eukaryotes. Proteins in this family are about 70 amino acids in length.

>COG2864 FdnI Cytochrome b subunit of formate dehydrogenase [Energy production and conversion]

Probab=82.00  E-value=1  Score=33.64  Aligned_cols=50  Identities=24%  Similarity=0.379  Sum_probs=37.5

Q ss_pred             HHHHHHhccceeE--EecCCCceeeeeCccchHHHHHHHHHHHHHHHHHHHHHHhheeccC
Q 035269           11 LLLFILLSPGLLF--QLPGNHRHFEFGSFATNGKAVLVHTLIFFGIYTILILAVGIHIYMG   69 (69)
Q Consensus        11 vvLFvlLsPGLLf--Q~PG~~r~veFgn~~Tsg~si~vHalifF~l~~if~~ai~vHiy~g   69 (69)
                      +..++++--|+..  |.|.     .+++..+...|.++|+.--+.+.+++    .+|+|++
T Consensus       123 l~~~~l~iTGivmw~~y~~-----~~~~i~~~r~s~l~h~~~a~~l~~~~----~vHiy~a  174 (218)
T COG2864         123 LAIVLLLITGIVIWRPYFA-----PYFSIPLLRLSLLLHAFAAVILIFII----IVHIYMA  174 (218)
T ss_pred             HHHHHHHHHHHHHHhhhcc-----ccccHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence            3446666778777  6664     45889999999999999888876654    4788864

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00