Citrus Sinensis ID: 035554

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560--
LNLSIEERLRHAYTKDGSLDFHGKPAIKDRTGGWRCGTLLLVNQGLANLAFAGVEVNMVLFAKSVLRQTNAEASNTFSRWMGSLYLSSLMGAFLSDSYLGRYLTCVTFQAFSIIGLLGLSFATQSFLLRPHGCGKIGQLCDPHSPAETAIFYISIYLFALGIGAPEPALATFGADQFDEEDPKEKKSKTSFYSYFYIALNLGCLFSETVLVYAENMGYWVLGFWICAGCDILAFSSLLSGTLRYRHFKPSGNPLSRFSQVIVASLRKINLEMPTNGGGLFEVHVREYEANGTRRILHTNDFKFLDRAAIMTSADITTNEDQNPNQWRLCTVTQVEEMLSLFVEQGAAMNTGVSNFQIPPASMTAFDIVSTTAFILLYDKLIVPLYLKVAKRRPKTPSELQRVGIGLAIATVAMIIAGIVEQRRLKYASFGGEETSSLSIFWQTPQYVLLGVSEAFVYVAQMEFFASQIPNGLKSLGIALSMSSTAIGTYVCSMILSVVMVLTTKNGKPGWVPPNLNDGHLDRFFFLSATVTAMNLGVFVVCARRYKSISLQKQEGESAAGVQ
ccccHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHccccHHHHHHHHHHHHHHcEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHcccCEEEccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccCECccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHEEEcccccccccccccccccc
****************GSLDFHGKPAIKDRTGGWRCGTLLLVNQGLANLAFAGVEVNMVLFAKSVLRQTNAEASNTFSRWMGSLYLSSLMGAFLSDSYLGRYLTCVTFQAFSIIGLLGLSFATQSFLLRPHGCGKIGQLCDPHSPAETAIFYISIYLFALGIGAPEPALATFGADQFDEE*****KSKTSFYSYFYIALNLGCLFSETVLVYAENMGYWVLGFWICAGCDILAFSSLLSGTLRYRHFKPSGNPLSRFSQVIVASLRKINLEMPTNGGGLFEVHVREYEANGTRRILHTNDFKFLDRAAIMTSADITTNEDQNPNQWRLCTVTQVEEMLSLFVEQGAAMNTGVSNFQIPPASMTAFDIVSTTAFILLYDKLIVPLYLKVAKRRPKTPSELQRVGIGLAIATVAMIIAGIVEQRRLKYASFGGEETSSLSIFWQTPQYVLLGVSEAFVYVAQMEFFASQIPNGLKSLGIALSMSSTAIGTYVCSMILSVVMVLTTKNGKPGWVPPNLNDGHLDRFFFLSATVTAMNLGVFVVCARRYKSI**************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxx
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LNLSIEERLRHAYTKDGSLDFHGKPAIKDRTGGWRCGTLLLVNQGLANLAFAGVEVNMVLFAKSVLRQTNAEASNTFSRWMGSLYLSSLMGAFLSDSYLGRYLTCVTFQAFSIIGLLGLSFATQSFLLRPHGCGKIGQLCDPHSPAETAIFYISIYLFALGIGAPEPALATFGADQFDEEDPKEKKSKTSFYSYFYIALNLGCLFSETVLVYAENMGYWVLGFWICAGCDILAFSSLLSGTLRYRHFKPSGNPLSRFSQVIVASLRKINLEMPTNGGGLFEVHVREYEANGTRRILHTNDFKFLDRAAIMTSADITTNEDQNPNQWRLCTVTQVEEMLSLFVEQGAAMNTGVSNFQIPPASMTAFDIVSTTAFILLYDKLIVPLYLKVAKRRPKTPSELQRVGIGLAIATVAMIIAGIVEQRRLKYASFGGEETSSLSIFWQTPQYVLLGVSEAFVYVAQMEFFASQIPNGLKSLGIALSMSSTAIGTYVCSMILSVVMVLTTKNGKPGWVPPNLNDGHLDRFFFLSATVTAMNLGVFVVCARRYKSISLQKQEGESAAGVQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Nitrate transporter 1.5 Low-affinity proton-dependent bidirectional nitrate transporter. Involved in nitrate loading into xylem and not in nitrate uptake. Not involved in histidine or dipeptides transport.probableQ9LQL2

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2XUT, chain A
Confidence level:very confident
Coverage over the Query: 36-126,146-248,269-311,326-380,397-524
View the alignment between query and template
View the model in PyMOL
Template: 4GC0, chain A
Confidence level:confident
Coverage over the Query: 70-308,329-422,436-555
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
4aps, chain Avery confident Alignment | Template Structure