Citrus Sinensis ID: 035649

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160---
Protein Sequence
MGDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMVFAPSHHHHHMGQQLMHPSSMYISAHSSNFGYFPTQQHFASASDRSKSNGAAARFDHQNNTVNQIIGSVANADKGKDSKLDLSLHL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccEEEccHcccccccccHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccEEEEcc
Coil and Loop (DISEMBL)
mgddhhrgkvsaeanvddssprvfpclfcsrkfyssqalgghqnahKKERTAARKAKRVAsdhlhqyasttpslppmvfapshhhhhmgqqlmhpssmyisahssnfgyfptqqhfasasdrsksngaaarfdhqnnTVNQIIGSvanadkgkdskldlslhl
Flexible Loop (DISEMBL)
mgddhhrgkvsaeanvddssprvFPCLFCSRKFYSsqalgghqnahKKERTAARKAKRVASDHLHQYASTTPSLPPMVFAPSHHHHHMGQQLMHPSSMYISAHSSNFGYFPTQQHFASASDRSKSNGAAARFDHQNNTVNQIIGsvanadkgkdskldlslhl
Low Complexity Region (SEG)
MGDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNahkkertaarkakrvaSDHLHQYASTTPSLPPMVFAPShhhhhMGQQLMHPSSMYISAHSSNFGYFPTQQHFASASDRSKSNGAAARFDHQNNTVNQIIGSVANADKGKDSKLDLSLHL
Disordered region (IsUnstruct)
**********************VFPCLFCSRKFYS********************************************************************************************************************************
Disordered Region (DISOPRED)
************************PCLFCSRKFYSSQALGGHQNAH***************************LPPMVFAPSHHHH**********************************************************************LDLSLHL
Disordered Region (DISEMBL)
******************SSPRVFPCLFCSRKFYSSQ***************************HQYASTTPSLPPMVFAPS*********LMHPSSMYISAHSSNFGYFPTQQH************AAARFDHQNNTVNQIIGSVANADKGKDSKLDLSLHL
Disordered Region (DISPRO)
********************PRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMVFAPSHHHHHMGQQLMHPSSMYISAHSSNFGYFPTQQHFASASDRSKSNGAAARFDHQNNTVNQIIGSVANADKGKDSKLDLSLHL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMVFAPSHHHHHMGQQLMHPSSMYISAHSSNFGYFPTQQHFASASDRSKSNGAAARFDHQNNTVNQIIGSVANADKGKDSKLDLSLHL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	163	2.2.26 [Sep-21-2011]
Q42485	228	Zinc finger protein 1 OS=	no	no	0.337	0.241	0.555	2e-12
Q39266	209	Zinc finger protein 7 OS=	no	no	0.349	0.272	0.566	1e-11
Q39263	260	Zinc finger protein 4 OS=	no	no	0.251	0.157	0.707	4e-11
Q39261	150	Zinc finger protein 2 OS=	no	no	0.239	0.26	0.717	1e-10
Q9FFX4	161	Zinc finger protein KNUCK	no	no	0.251	0.254	0.658	1e-10
Q39262	235	Zinc finger protein 3 OS=	no	no	0.245	0.170	0.625	5e-10
Q39265	197	Zinc finger protein 6 OS=	no	no	0.404	0.335	0.441	4e-08
Q6S591	253	Zinc finger protein JAGGE	no	no	0.202	0.130	0.606	7e-05
Q38895	204	Transcriptional regulator	no	no	0.208	0.166	0.529	7e-05
Q9LHS9	226	Probable transcriptional	no	no	0.184	0.132	0.566	0.0001

>sp|Q42485|ZFP1_ARATH Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 40/63 (63%), Gaps = 8/63 (12%)

Query: 21  PRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMVFA 80
           PRVF C +C RKFYSSQALGGHQNAHK+ERT A++ +         Y  T  SLP   FA
Sbjct: 65  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQY--------YKMTLSSLPSSAFA 116

Query: 81  PSH 83
             H
Sbjct: 117 FGH 119

Arabidopsis thaliana (taxid: 3702)

>sp|Q39266|ZFP7_ARATH Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 3/60 (5%)

Query: 18  DSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAK---RVASDHLHQYASTTPSL 74
           +++PRVF C +C RKFYSSQALGGHQNAHK+ERT A++A    R+   H   Y  T+ SL
Sbjct: 53  EANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSL 112

Arabidopsis thaliana (taxid: 3702)

>sp|Q39263|ZFP4_ARATH Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 34/41 (82%)

Query: 20  SPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVA 60
           S RVF C +C RKFYSSQALGGHQNAHK+ERT A++A R+ 
Sbjct: 81  SKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMG 121

Arabidopsis thaliana (taxid: 3702)

>sp|Q39261|ZFP2_ARATH Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/39 (71%), Positives = 33/39 (84%)

Query: 21 PRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRV 59
          PRVF C +C RKFYSSQALGGHQNAHK ERT A+K++ +
Sbjct: 49 PRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREL 87

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/41 (65%), Positives = 34/41 (82%)

Query: 22 RVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASD 62
          R+FPC +C RKFY+SQALGGHQNAHK+ER AAR+   V ++
Sbjct: 36 RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRNLGVLAN 76

May function as a transcriptional repressor of cellular proliferation that regulates floral determinacy and relative size of basal pattern elements along the proximo-distal axis of the developing gynoecium.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39262|ZFP3_ARATH Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1

 Score = 63.9 bits (154), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 25/40 (62%), Positives = 34/40 (85%)

Query: 22 RVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVAS 61
          ++F C +C R FYSSQALGGHQNAHK+ERT A++ +R+A+
Sbjct: 59 KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAA 98

Arabidopsis thaliana (taxid: 3702)

>sp|Q39265|ZFP6_ARATH Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 19  SSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPPMV 78
           S  R + C +C R+F +SQALGGHQNAHKKER   ++A+ +A+  L ++ +  P   P++
Sbjct: 36  SESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLL 95

Query: 79  --FAPSHH 84
             FAP  H
Sbjct: 96  SAFAPLPH 103

Arabidopsis thaliana (taxid: 3702)

>sp|Q6S591|JAG_ARATH Zinc finger protein JAGGED OS=Arabidopsis thaliana GN=JAG PE=2 SV=1

 Score = 46.6 bits (109), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 24/33 (72%)

Query: 18 DSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER 50
          D S +V+ C FCS KF  SQALGGH N H++ER
Sbjct: 45 DESGKVYECRFCSLKFCKSQALGGHMNRHRQER 77

Controls the morphogenesis of lateral organs. Functions in lateral organ shape and is sufficient to induce proliferation and growth of lateral organ tissue. Is necessary and sufficient for bract formation, but its expression is excluded from the cryptic bract, which could be a cause of bractless flowers in Arabidopsis. Participates with FIL and YAB3 in regulating valve margin development. Functions with JGL to define stamen and carpel shape. Functions with AS1 and AS2 in the sepal and petal primordia to repress boundary-specifying genes for normal development of the organs.

Arabidopsis thaliana (taxid: 3702)

>sp|Q38895|SUP_ARATH Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1

 Score = 46.6 bits (109), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 18/34 (52%), Positives = 24/34 (70%)

Query: 21 PRVFPCLFCSRKFYSSQALGGHQNAHKKERTAAR 54
          PR + C FC R+F S+QALGGH N H+++R   R
Sbjct: 44 PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 77

Probable transcriptional regulator considered as cadastral protein that acts indirectly to prevent the B class homeotic proteins APETALA3 and perhaps PISTILLATA from acting in the gynoecial whorl. Principal function is to balance cell proliferation in the third and fourth whorls of developing flowers thereby maintaining the boundary between stamens and carpels. May fulfill this role by repressing genes implicated in cell division. Plays equally a role in the determinacy of the floral meristem. Is also required for normal ovule development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2

 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 23/30 (76%)

Query: 21 PRVFPCLFCSRKFYSSQALGGHQNAHKKER 50
          PR + C FC R+F S+QALGGH N H+++R
Sbjct: 52 PRSYSCSFCGREFKSAQALGGHMNVHRRDR 81

Probable transcriptional regulator essential for petal development. Required for the early development of the organ primordia of the second whorl. Acts downstream of AP1 and PTL.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
225464212	183	PREDICTED: uncharacterized protein LOC10	0.840	0.748	0.435	2e-26
224065302	190	predicted protein [Populus trichocarpa]	0.680	0.584	0.552	1e-24
356527409	176	PREDICTED: zinc finger protein 7-like [G	0.926	0.857	0.425	2e-24
351727837	176	uncharacterized protein LOC100527084 [Gl	0.926	0.857	0.414	3e-24
224132050	179	predicted protein [Populus trichocarpa]	0.791	0.720	0.434	8e-22
449517385	147	PREDICTED: zinc finger protein 7-like [C	0.631	0.700	0.514	2e-20
255560219	199	zinc finger protein, putative [Ricinus c	0.662	0.542	0.560	6e-20
297792083	173	transcription factor [Arabidopsis lyrata	0.889	0.838	0.431	1e-14
15239730	173	C2H2-like zinc finger protein [Arabidops	0.889	0.838	0.431	3e-14
302398665	280	C2H2L domain class transcription factor	0.361	0.210	0.537	1e-12

>gi|225464212|ref|XP_002264981.1| PREDICTED: uncharacterized protein LOC100246047 [Vitis vinifera] gi|297744296|emb|CBI37266.3| unnamed protein product [Vitis vinifera]

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/193 (43%), Positives = 111/193 (57%), Gaps = 56/193 (29%)

Query: 13  EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTP 72
           +  ++DS+ RVFPCLFCSRKF+SSQALGGHQNAHKKERTAARKAKR +   L+ +++T P
Sbjct: 5   DKTIEDSATRVFPCLFCSRKFHSSQALGGHQNAHKKERTAARKAKRASEYTLNSFSATPP 64

Query: 73  SLPPMVFAPSHHHHHMGQQLMHPSSMYISAHSSNFG-YFPTQQHFASASDRSKSNGA--- 128
             PP+VFAPS   HH+G  + +P SMYI+AH++ F  +FPT Q     S+R  ++GA   
Sbjct: 65  --PPLVFAPS---HHLG--IFNP-SMYITAHAATFANHFPTPQF----SERFGASGAPRL 112

Query: 129 ------------AARFDHQ-----------------NNTV---------NQIIGSVANAD 150
                          + HQ                 NN +         NQ +G   + +
Sbjct: 113 ENVVFYGGGSCSGNVYQHQLGDDEQSLVNWQRSALRNNAMNGGSSQHIKNQKLG--GDIE 170

Query: 151 KGKDSKLDLSLHL 163
           + KD KLDLSLHL
Sbjct: 171 RDKDKKLDLSLHL 183

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065302|ref|XP_002301764.1| predicted protein [Populus trichocarpa] gi|222843490|gb|EEE81037.1| predicted protein [Populus trichocarpa]

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 85/125 (68%), Gaps = 14/125 (11%)

Query: 9   KVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYA 68
           KVS     +D++ RVFPCLFCSRKFYSSQALGGHQNAHKKER AARK +RV+     +YA
Sbjct: 6   KVSPIHAEEDTAARVFPCLFCSRKFYSSQALGGHQNAHKKERNAARKTRRVS-----EYA 60

Query: 69  STTPSLPPMVFAPSHHHHHMGQQLMHPSSMYISAHSSNFGYFPTQQHFASASDRSKSNGA 128
            + P   P++F+PS   HH+G  L+HPS    +AH++N    PT   F   SDR  S+G 
Sbjct: 61  PSPPPTFPVIFSPS---HHLG--LLHPSMYTSTAHAANLHCHPTHDQF---SDRLGSSG- 111

Query: 129 AARFD 133
           AARFD
Sbjct: 112 AARFD 116

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527409|ref|XP_003532303.1| PREDICTED: zinc finger protein 7-like [Glycine max]

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/188 (42%), Positives = 108/188 (57%), Gaps = 37/188 (19%)

Query: 1   MGDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVA 60
           M DD    KV  E+  +DSS RVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAK+ +
Sbjct: 1   MEDDVKVAKV-GESQREDSS-RVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKKAS 58

Query: 61  SDHLHQYASTTPSLPPMVFAPSHHHHHMGQQLMHPSSMYISAHSSNFGYFPTQQ------ 114
                 + S  P+  PMVFAP+    H+G  +++P +M+I+AH++   + P+ Q      
Sbjct: 59  EHSCVSFPSPLPT--PMVFAPT----HLG--ILNP-AMFITAHAARLPHLPSHQISEQFG 109

Query: 115 ------------HFASASDRSKSNGAAARFDHQNNTV-------NQIIGSVANADKGKDS 155
                       +  S+ +R   +G ++ F   + +        NQ +G + N    KD 
Sbjct: 110 SNGAPRFGNALFYRGSSKNRLHDDGKSSTFCWGDTSQHMQLLSNNQNLG-IWNNGTEKDQ 168

Query: 156 KLDLSLHL 163
           KLDLSLHL
Sbjct: 169 KLDLSLHL 176

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727837|ref|NP_001238454.1| uncharacterized protein LOC100527084 [Glycine max] gi|255631518|gb|ACU16126.1| unknown [Glycine max]

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 106/188 (56%), Gaps = 37/188 (19%)

Query: 1   MGDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVA 60
           M D+    KV  E+  +DSS R+FPCLFCSRKFYSSQALGGHQNAHKKERTAARKAK+ +
Sbjct: 1   MEDEVKVAKV-GESQREDSS-RIFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKKAS 58

Query: 61  SDHLHQYASTTPSLPPMVFAPSHHHHHMGQQLMHPSSMYISAHSSNFGYFPTQQ------ 114
                 + S  P+  PMVFAP+H        +++P +M+I+AH++   + P+ Q      
Sbjct: 59  EHSCVSFPSPLPT--PMVFAPTH------LDIINP-AMFITAHAAKLPHLPSHQISEQFG 109

Query: 115 ------------HFASASDRSKSNGAAARFDHQNNTV-------NQIIGSVANADKGKDS 155
                       +  S+ +R   +G ++ F   N +        NQ +G + N    KD 
Sbjct: 110 SNGAPRFGNALFYGGSSINRFHDDGKSSNFSWGNTSQHIQLISNNQNLG-IWNNGTEKDQ 168

Query: 156 KLDLSLHL 163
           KLDLSLHL
Sbjct: 169 KLDLSLHL 176

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132050|ref|XP_002321243.1| predicted protein [Populus trichocarpa] gi|222862016|gb|EEE99558.1| predicted protein [Populus trichocarpa]

 Score =  108 bits (270), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 96/184 (52%), Gaps = 55/184 (29%)

Query: 17  DDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYASTTPSLPP 76
           +D++ RVFPCLFCSRKFYSSQALGGHQNAHKKER AARKAKR +           P   P
Sbjct: 14  EDTTARVFPCLFCSRKFYSSQALGGHQNAHKKERNAARKAKRASEIF-------PPPTFP 66

Query: 77  MVFAPSHHHHHMGQQLMHPSSMYISAHSSNFGYFPTQQHFASASDRSKSNGAAARFDH-- 134
           ++FAPS   HH+G  L+HP S+Y +AH++     PT Q     SDR  SN  AARFD+  
Sbjct: 67  IMFAPS---HHLG--LLHP-SLYRTAHAATLPCPPTHQF----SDRFGSNN-AARFDNVL 115

Query: 135 ------------------------------QNNTVNQIIGSV-ANADKG----KDSKLDL 159
                                              NQ +  V  N + G    KD KLDL
Sbjct: 116 FYGSSRYRQYDQEDEQSFLNWQRSVRFNGFNEGGSNQYLSRVNGNPNMGIRNDKDQKLDL 175

Query: 160 SLHL 163
           +LHL
Sbjct: 176 TLHL 179

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449517385|ref|XP_004165726.1| PREDICTED: zinc finger protein 7-like [Cucumis sativus]

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/107 (51%), Positives = 67/107 (62%), Gaps = 4/107 (3%)

Query: 10  VSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYAS 69
           V     ++++  RVFPCLFCSRKF SSQALGGHQNAHKKERTAARKAKR+  D+     S
Sbjct: 21  VEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRIC-DYSVSPPS 79

Query: 70  TTPSLPPMVFAPSHHHHHMGQQLMHPSSMYISAHSSNFGYFPTQQHF 116
             P+   +VFA S   HH G   + P  +YI+ H +N   FP  Q  
Sbjct: 80  PFPAPTSLVFAASQQQHHPG---LLPHPVYIATHGANLHCFPNNQQL 123

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560219|ref|XP_002521127.1| zinc finger protein, putative [Ricinus communis] gi|223539696|gb|EEF41278.1| zinc finger protein, putative [Ricinus communis]

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/123 (56%), Positives = 82/123 (66%), Gaps = 15/123 (12%)

Query: 11  SAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQYAST 70
           ++ A  D  + RVFPCLFCSRKFYSSQALGGHQNAHKKER AARKAKR +     ++A  
Sbjct: 10  ASTAEEDTRNTRVFPCLFCSRKFYSSQALGGHQNAHKKERNAARKAKRAS-----EFA-- 62

Query: 71  TPSLPPMVFAPSHHHHHMGQQLMHPSSMYISAHSSNFGYFPTQQHFASASDRSKSNGAAA 130
            P   PMVFAPSHHHH +G       SMYI+AH+++   +P+ Q     SD   SNG A 
Sbjct: 63  PPPALPMVFAPSHHHHPLGLLH---PSMYITAHAASLHCYPSHQF----SDTFGSNG-AP 114

Query: 131 RFD 133
           RFD
Sbjct: 115 RFD 117

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792083|ref|XP_002863926.1| transcription factor [Arabidopsis lyrata subsp. lyrata] gi|297309761|gb|EFH40185.1| transcription factor [Arabidopsis lyrata subsp. lyrata]

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 22/167 (13%)

Query: 9   KVSAEAN---VDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRV-----A 60
           K S EAN    D SS R+FPCLFCSRKF+SSQALGGHQNAHKKERTAAR+AKR      +
Sbjct: 17  KPSKEANKTDEDTSSSRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFINS 76

Query: 61  SDHLHQYASTTPSLPPMVFAPSHHHHHMGQQLMHPSS----MYISAHSSNFGYFPTQQHF 116
           +D LH       +LP  + +PS  H  +   L +P+S     + + H+ +  +  +  H 
Sbjct: 77  NDLLH-------TLPVFLSSPSRRHLTI---LGYPASASVACFPAVHTDHPIFRSSGSHV 126

Query: 117 ASASDRSKSNGAAARFDHQNNTVNQIIGSVANADKGKDSKLDLSLHL 163
             A+           F  Q+  +     +V N+DKGKD  LDLSLHL
Sbjct: 127 VLATSHQGRECKGGYFGQQHVDILDHHYNVVNSDKGKDQCLDLSLHL 173

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239730|ref|NP_199700.1| C2H2-like zinc finger protein [Arabidopsis thaliana] gi|9758888|dbj|BAB09442.1| unnamed protein product [Arabidopsis thaliana] gi|332008356|gb|AED95739.1| C2H2-like zinc finger protein [Arabidopsis thaliana]

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 92/167 (55%), Gaps = 22/167 (13%)

Query: 9   KVSAEANVDD---SSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVA----- 60
           K S EAN  D   SS R+FPCLFCSRKF+SSQALGGHQNAHKKERTAAR+AKR       
Sbjct: 17  KPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNN 76

Query: 61  SDHLHQYASTTPSLPPMVFAPSHHHHHMGQQLMHPSS----MYISAHSSNFGYFPTQQHF 116
           +D LH       +LP  + +PS HH  +   L +P+S     + + H  +  +  +  H 
Sbjct: 77  NDFLH-------TLPVFLSSPSQHHLTI---LGYPASASVACFPTVHPDHPIFKSSGSHV 126

Query: 117 ASASDRSKSNGAAARFDHQNNTVNQIIGSVANADKGKDSKLDLSLHL 163
             A+     +        Q   +     +V N+DKGKD  LDLSLHL
Sbjct: 127 VLATSHQGRDCKGGYCCQQRVDILDHHYNVVNSDKGKDQCLDLSLHL 173

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398665|gb|ADL36627.1| C2H2L domain class transcription factor [Malus x domestica]

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 8/67 (11%)

Query: 17  DDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHL--------HQYA 68
           D + PRVFPC +C RKFYSSQALGGHQNAHK+ERT A++ +R+   H+        + Y 
Sbjct: 102 DAAEPRVFPCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRMLGSHITASAAGFGYPYY 161

Query: 69  STTPSLP 75
           S+  SLP
Sbjct: 162 SSLASLP 168

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
TAIR|locus:2156529	173	LATE "LATE FLOWERING" [Arabido	0.938	0.884	0.333	1.3e-13
TAIR|locus:2825107	209	ZFP7 "AT1G24625" [Arabidopsis	0.165	0.129	0.740	4.4e-07
TAIR|locus:2174547	150	ZFP2 "AT5G57520" [Arabidopsis	0.208	0.226	0.605	4.8e-07
TAIR|locus:2159088	161	KNU "AT5G14010" [Arabidopsis t	0.208	0.211	0.588	6.1e-07
TAIR|locus:2025777	228	ZFP1 "AT1G80730" [Arabidopsis	0.159	0.114	0.769	1e-06
TAIR|locus:2181007	215	AT5G01860 "AT5G01860" [Arabido	0.883	0.669	0.257	3.2e-06
TAIR|locus:2013820	260	ZFP4 "AT1G66140" [Arabidopsis	0.153	0.096	0.8	5.4e-06
TAIR|locus:2183780	272	AT5G10970 "AT5G10970" [Arabido	0.226	0.136	0.526	0.00011
TAIR|locus:2146960	235	ZFP3 "AT5G25160" [Arabidopsis	0.141	0.097	0.695	0.00013

TAIR|locus:2156529 LATE "LATE FLOWERING" [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 53/159 (33%), Positives = 72/159 (45%)

Query:     9 KVSAEANVDD---SSPRVFPCLFCSRKFYSSQALGGHQNXXXXXXXXXXXXXXXXSDHLH 65
             K S EAN  D   SS R+FPCLFCSRKF+SSQALGGHQN                 D ++
Sbjct:    17 KPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAY-DFVN 75

Query:    66 QYASTTPSLPPMVFAPSXXXXX-MGQQLMHPSSMYISAHSSNFGYFPTQQHFASASDRSK 124
                    +LP  + +PS      +G       + + + H  +  +  +  H   A+    
Sbjct:    76 NN-DFLHTLPVFLSSPSQHHLTILGYPASASVACFPTVHPDHPIFKSSGSHVVLATSHQG 134

Query:   125 SNGAAARFDHQNNTVNQIIGSVANADKGKDSKLDLSLHL 163
              +        Q   +     +V N+DKGKD  LDLSLHL
Sbjct:   135 RDCKGGYCCQQRVDILDHHYNVVNSDKGKDQCLDLSLHL 173

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0042752 "regulation of circadian rhythm" evidence=IMP

GO:0048579 "negative regulation of long-day photoperiodism, flowering" evidence=IMP

TAIR|locus:2825107 ZFP7 "AT1G24625" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 4.4e-07, P = 4.4e-07
 Identities = 20/27 (74%), Positives = 24/27 (88%)

Query:    18 DSSPRVFPCLFCSRKFYSSQALGGHQN 44
             +++PRVF C +C RKFYSSQALGGHQN
Sbjct:    53 EANPRVFSCNYCRRKFYSSQALGGHQN 79

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0046982 "protein heterodimerization activity" evidence=IPI

TAIR|locus:2174547 ZFP2 "AT5G57520" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 23/38 (60%), Positives = 28/38 (73%)

Query:    11 SAEANVDDSS----PRVFPCLFCSRKFYSSQALGGHQN 44
             S+ ++ + SS    PRVF C +C RKFYSSQALGGHQN
Sbjct:    35 SSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQN 72

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2159088 KNU "AT5G14010" [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 20/34 (58%), Positives = 26/34 (76%)

Query:    11 SAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQN 44
             S  ++   +S R+FPC +C RKFY+SQALGGHQN
Sbjct:    25 SFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQN 58

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009909 "regulation of flower development" evidence=IMP

GO:0010582 "floral meristem determinacy" evidence=IMP

TAIR|locus:2025777 ZFP1 "AT1G80730" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 20/26 (76%), Positives = 22/26 (84%)

Query:    19 SSPRVFPCLFCSRKFYSSQALGGHQN 44
             + PRVF C +C RKFYSSQALGGHQN
Sbjct:    63 ADPRVFSCNYCQRKFYSSQALGGHQN 88

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009640 "photomorphogenesis" evidence=IEP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2181007 AT5G01860 "AT5G01860" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 41/159 (25%), Positives = 64/159 (40%)

Query:    17 DDSSPRVFPCLFCSRKFYSSQALGGHQNXXXXXXXXXXXXXXXXSDH--LHQYASTTPSL 74
             +++  RVF C FC ++F +SQALGGHQN                 ++  L  Y+   PS 
Sbjct:    60 NEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEIEINYPELSIYSQYPPS- 118

Query:    75 PPMVFAPSXXXXXMGQQ----LMHPSSMY-ISAHSSNFGY-----FPTQQHFASASDRSK 124
               + F+ S     +G +    +   +  Y  +  +  FGY     FP   H +       
Sbjct:   119 -GLSFSSSSSQYDLGVRYNPNIAKTTKPYPFNIFACRFGYRGGLNFPPMSHLSVPKTDDL 177

Query:   125 SNGAAARFDHQNNTVNQIIGSVANADKGKDSKLDLSLHL 163
             S    +  +   +    +      AD  KDS +DLSL L
Sbjct:   178 SINLISNLEGSIHD-QAVKKDQPEADPCKDSDIDLSLKL 215

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2013820 ZFP4 "AT1G66140" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 20/25 (80%), Positives = 21/25 (84%)

Query:    20 SPRVFPCLFCSRKFYSSQALGGHQN 44
             S RVF C +C RKFYSSQALGGHQN
Sbjct:    81 SKRVFSCNYCQRKFYSSQALGGHQN 105

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2183780 AT5G10970 "AT5G10970" [Arabidopsis thaliana (taxid:3702)]

 Score = 98 (39.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
 Identities = 20/38 (52%), Positives = 25/38 (65%)

Query:     8 GKVSAEANVDDSSP-RVFPCLFCSRKFYSSQALGGHQN 44
             G V+   N   S+  ++F C +C R FYSSQALGGHQN
Sbjct:    87 GVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQN 124

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2146960 ZFP3 "AT5G25160" [Arabidopsis thaliana (taxid:3702)]

 Score = 95 (38.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 16/23 (69%), Positives = 19/23 (82%)

Query:    22 RVFPCLFCSRKFYSSQALGGHQN 44
             ++F C +C R FYSSQALGGHQN
Sbjct:    59 KLFSCNYCQRTFYSSQALGGHQN 81

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_II002395 hypothetical protein (190 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	163
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	98.46
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	97.82
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	97.82
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	97.79
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.66
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	97.43
KOG3576	267	consensus Ovo and related transcription factors [T	97.38
PHA00616	44	hypothetical protein	97.23
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.95
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	96.57
PHA02768	55	hypothetical protein; Provisional	96.54
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.49
KOG3576	267	consensus Ovo and related transcription factors [T	96.37
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.24
PHA02768	55	hypothetical protein; Provisional	95.79
smart00355	26	ZnF_C2H2 zinc finger.	95.57
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.02
PHA00733	128	hypothetical protein	93.96
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	93.1
PHA00733	128	hypothetical protein	92.15
PHA00732	79	hypothetical protein	91.76
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	90.54
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	89.41
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	87.6
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	83.69
KOG3608	467	consensus Zn finger proteins [General function pre	83.59
KOG3993	500	consensus Transcription factor (contains Zn finger	82.93
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	80.87

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=98.46  E-value=7.7e-08  Score=82.66  Aligned_cols=52  Identities=17%  Similarity=0.347  Sum_probs=49.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|-+-=.|+-|-|+|||+|||.|..|+|.|..+.+|..||++|.+.|.|.
T Consensus       194 GKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~q  245 (279)
T KOG2462|consen  194 GKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQ  245 (279)
T ss_pred             cccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCcccc
Confidence            7888888899999999999999999999999999999999999999988876

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=97.82  E-value=3.8e-06  Score=81.08  Aligned_cols=59  Identities=19%  Similarity=0.318  Sum_probs=52.3

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchHHhhhhcc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVA   60 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a~r~~~~~   60 (163)
                      |+-|-.-..|++|+++|+++|||.|.+|++.|.....|+.||..|.+..++++|+.+.+
T Consensus       886 gk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~srrG~~~~  944 (958)
T KOG1074|consen  886 GKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPSRRGPSPF  944 (958)
T ss_pred             hhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCccCCCCcc
Confidence            44455555689999999999999999999999999999999999999999999977655

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=97.82  E-value=5.1e-06  Score=79.59  Aligned_cols=46  Identities=22%  Similarity=0.458  Sum_probs=43.9

Q ss_pred             CcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649            8 GKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         8 ~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ..+|.+|.=.|+|.+||+|.+|.|.|..+..|..|+|.|.|||||.
T Consensus       907 qSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQ  952 (1007)
T KOG3623|consen  907 QSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQ  952 (1007)
T ss_pred             hHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcch
Confidence            4578999999999999999999999999999999999999999997

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=97.79  E-value=1.2e-05  Score=77.85  Aligned_cols=44  Identities=25%  Similarity=0.424  Sum_probs=39.7

Q ss_pred             cccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649            9 KVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus         9 ~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      ..|+-|-|+|+++|||+|.+|++.|..+.+|+.|+.+|+..-++
T Consensus       619 saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~  662 (958)
T KOG1074|consen  619 SALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPA  662 (958)
T ss_pred             hhhhhhhhcccCcCccccccccchhccccchhhcccccccCccc
Confidence            45788999999999999999999999999999999999865444

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.66  E-value=3.7e-06  Score=47.92  Aligned_cols=25  Identities=12%  Similarity=0.466  Sum_probs=22.5

Q ss_pred             cccCCCCCCCCceeeCCCCCccccC
Q 035649           11 SAEANVDDSSPRVFPCLFCSRKFYS   35 (163)
Q Consensus        11 ~~~h~~~HTg~KPfkC~~CgksFss   35 (163)
                      |..|.++|++++||+|++|++.|.+
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            5678899999999999999999863

...

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=97.43  E-value=3.9e-05  Score=66.16  Aligned_cols=52  Identities=15%  Similarity=0.235  Sum_probs=40.7

Q ss_pred             cccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchHHhhhhccccccCC
Q 035649           11 SAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVASDHLHQ   66 (163)
Q Consensus        11 ~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a~r~~~~~~~~~~~   66 (163)
                      |.-|-++|+  -+++|.+|+|.|...=-|.+|+|.|+|||||.  +..++-+|+|+
T Consensus       177 LkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~--C~hC~kAFADR  228 (279)
T KOG2462|consen  177 LKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFS--CPHCGKAFADR  228 (279)
T ss_pred             HhhHhhccC--CCcccccccccccchHHhhcccccccCCCCcc--CCcccchhcch
Confidence            455666666  78999999999999999999999999999997  33444344443

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=97.38  E-value=5.6e-05  Score=63.56  Aligned_cols=59  Identities=19%  Similarity=0.321  Sum_probs=48.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhh-hhccCccchHHhhhhcc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQ-NAHKKERTAARKAKRVA   60 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~Hq-riHtgERp~a~r~~~~~   60 (163)
                      |+-||----|.+|.++||+.+||+|..|++.|.+.-+|..|. ++|.....||-+.+|..
T Consensus       152 gkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~k  211 (267)
T KOG3576|consen  152 GKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAK  211 (267)
T ss_pred             cCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhh
Confidence            566666667889999999999999999999999999999996 56766677776666654

>PHA00616 hypothetical protein

Probab=97.23  E-value=9.6e-05  Score=47.65  Aligned_cols=31  Identities=19%  Similarity=0.397  Sum_probs=28.7

Q ss_pred             eeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           23 VFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ||+|..|++.|...+.|..|++.|++++++.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~   31 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLT   31 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccc
Confidence            6899999999999999999999999988764

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.95  E-value=0.00045  Score=37.34  Aligned_cols=23  Identities=30%  Similarity=0.714  Sum_probs=21.3

Q ss_pred             eeCCCCCccccCchhhhhhhhhc
Q 035649           24 FPCLFCSRKFYSSQALGGHQNAH   46 (163)
Q Consensus        24 fkC~~CgksFsssqsL~~HqriH   46 (163)
                      |+|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999864

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=96.57  E-value=0.00049  Score=66.36  Aligned_cols=42  Identities=21%  Similarity=0.312  Sum_probs=28.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhh
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQ   43 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~Hq   43 (163)
                      |+.|.|+-.|..|-|+|+|+|||.|..|.|.|+.+.++..||
T Consensus       288 gKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHm  329 (1007)
T KOG3623|consen  288 GKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHM  329 (1007)
T ss_pred             chhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccc
Confidence            566666666666777777777777777777777666666665

>PHA02768 hypothetical protein; Provisional

Probab=96.54  E-value=0.0011  Score=44.55  Aligned_cols=25  Identities=16%  Similarity=0.493  Sum_probs=23.8

Q ss_pred             eeeCCCCCccccCchhhhhhhhhcc
Q 035649           23 VFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      -|+|++|++.|...++|..|++.|+
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~   29 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN   29 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC
Confidence            4799999999999999999999998

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.49  E-value=0.0014  Score=36.67  Aligned_cols=25  Identities=36%  Similarity=0.602  Sum_probs=23.0

Q ss_pred             eeeCCCCCccccCchhhhhhhhhcc
Q 035649           23 VFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      ||+|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998774

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=96.37  E-value=0.00031  Score=59.15  Aligned_cols=52  Identities=19%  Similarity=0.294  Sum_probs=46.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|.+.-.|-+|-+-|+..+.+.|..|+++|...-.|++|+++|++-|||.
T Consensus       124 gK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpyk  175 (267)
T KOG3576|consen  124 GKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYK  175 (267)
T ss_pred             hhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccc
Confidence            5666777778889999999999999999999999999999999999999986

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.24  E-value=0.003  Score=33.44  Aligned_cols=23  Identities=35%  Similarity=0.772  Sum_probs=19.3

Q ss_pred             eeCCCCCccccCchhhhhhhhhc
Q 035649           24 FPCLFCSRKFYSSQALGGHQNAH   46 (163)
Q Consensus        24 fkC~~CgksFsssqsL~~HqriH   46 (163)
                      |.|++|++.|.+...|..|+..|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            78999999999999999998765

...

>PHA02768 hypothetical protein; Provisional

Probab=95.79  E-value=0.0015  Score=43.92  Aligned_cols=37  Identities=11%  Similarity=-0.014  Sum_probs=32.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhh
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALG   40 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~   40 (163)
                      |+.|.+...|..|+++|+  ++++|..|++.|.....|.
T Consensus        12 GK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768         12 GEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             CCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            788899999999999999  7999999999999776654

>smart00355 ZnF_C2H2 zinc finger

Probab=95.57  E-value=0.0084  Score=31.80  Aligned_cols=24  Identities=33%  Similarity=0.632  Sum_probs=21.6

Q ss_pred             eeCCCCCccccCchhhhhhhhhcc
Q 035649           24 FPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        24 fkC~~CgksFsssqsL~~HqriHt   47 (163)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.02  E-value=0.03  Score=37.50  Aligned_cols=34  Identities=18%  Similarity=0.304  Sum_probs=23.8

Q ss_pred             CCCCceeeCCCCCccccCchhhhhhhhhccCccc
Q 035649           18 DSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERT   51 (163)
Q Consensus        18 HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp   51 (163)
                      ...+.|-.|++|+..+.++.+|.+|+.++.+.+|
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3457899999999999999999999988766554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PHA00733 hypothetical protein

Probab=93.96  E-value=0.027  Score=43.32  Aligned_cols=35  Identities=20%  Similarity=0.244  Sum_probs=27.8

Q ss_pred             cccCCCCCCCCceeeCCCCCccccCchhhhhhhhhc
Q 035649           11 SAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAH   46 (163)
Q Consensus        11 ~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriH   46 (163)
                      +..+..++ ..+||.|..|++.|.+...|..|++.+
T Consensus        62 l~~~~~~~-~~kPy~C~~Cgk~Fss~s~L~~H~r~h   96 (128)
T PHA00733         62 LYKLLTSK-AVSPYVCPLCLMPFSSSVSLKQHIRYT   96 (128)
T ss_pred             HHhhcccC-CCCCccCCCCCCcCCCHHHHHHHHhcC
Confidence            44454443 478999999999999999999999865

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=93.10  E-value=0.045  Score=29.82  Aligned_cols=23  Identities=30%  Similarity=0.657  Sum_probs=20.6

Q ss_pred             eeCCCCCccccCchhhhhhhhhc
Q 035649           24 FPCLFCSRKFYSSQALGGHQNAH   46 (163)
Q Consensus        24 fkC~~CgksFsssqsL~~HqriH   46 (163)
                      |.|..|.+.|.+...+..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999998754

>PHA00733 hypothetical protein

Probab=92.15  E-value=0.091  Score=40.34  Aligned_cols=42  Identities=10%  Similarity=0.044  Sum_probs=30.3

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhh
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNA   45 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~Hqri   45 (163)
                      |..+.....|..|.+.+  ..+|.|..|++.|.....|..|+..
T Consensus        80 gk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~  121 (128)
T PHA00733         80 LMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCK  121 (128)
T ss_pred             CCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHH
Confidence            44556666677777765  3568888888888888888888754

>PHA00732 hypothetical protein

Probab=91.76  E-value=0.11  Score=37.01  Aligned_cols=26  Identities=27%  Similarity=0.441  Sum_probs=21.7

Q ss_pred             eeeCCCCCccccCchhhhhhhhh-ccC
Q 035649           23 VFPCLFCSRKFYSSQALGGHQNA-HKK   48 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~Hqri-Htg   48 (163)
                      ||.|..|++.|.+...|..|++. |.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~   27 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL   27 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC
Confidence            57899999999999999999874 654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=90.54  E-value=0.13  Score=28.91  Aligned_cols=22  Identities=32%  Similarity=0.584  Sum_probs=20.0

Q ss_pred             eeCCCCCccccCchhhhhhhhh
Q 035649           24 FPCLFCSRKFYSSQALGGHQNA   45 (163)
Q Consensus        24 fkC~~CgksFsssqsL~~Hqri   45 (163)
                      |.|..|++.|.+...+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6899999999999999999864

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=89.41  E-value=0.23  Score=26.87  Aligned_cols=22  Identities=27%  Similarity=0.516  Sum_probs=17.2

Q ss_pred             eeCCCCCccccCchhhhhhhhhc
Q 035649           24 FPCLFCSRKFYSSQALGGHQNAH   46 (163)
Q Consensus        24 fkC~~CgksFsssqsL~~HqriH   46 (163)
                      |+|..|..... ...|..|++.+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            78999998887 88999998764

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=87.60  E-value=0.36  Score=27.12  Aligned_cols=21  Identities=38%  Similarity=0.890  Sum_probs=17.2

Q ss_pred             eeCCCCCccccCchhhhhhhhh
Q 035649           24 FPCLFCSRKFYSSQALGGHQNA   45 (163)
Q Consensus        24 fkC~~CgksFsssqsL~~Hqri   45 (163)
                      ..|..|++.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 67778888754

>smart00451 ZnF_U1 U1-like zinc finger

Probab=83.69  E-value=0.72  Score=26.68  Aligned_cols=23  Identities=22%  Similarity=0.504  Sum_probs=19.8

Q ss_pred             eeeCCCCCccccCchhhhhhhhh
Q 035649           23 VFPCLFCSRKFYSSQALGGHQNA   45 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~Hqri   45 (163)
                      +|.|.+|.+.|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999888888753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=83.59  E-value=0.52  Score=42.85  Aligned_cols=38  Identities=18%  Similarity=0.280  Sum_probs=31.3

Q ss_pred             ccccCCC-CCCCCceeeCCCCCccccCchhhhhhhhhcc
Q 035649           10 VSAEANV-DDSSPRVFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        10 ~~~~h~~-~HTg~KPfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      +|..|-+ .|+.+|||+|+.|.+.|.....|..|..+|+
T Consensus       278 sL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  278 SLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             HHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence            4455544 3677899999999999999999999998887

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=82.93  E-value=0.65  Score=42.92  Aligned_cols=38  Identities=21%  Similarity=0.335  Sum_probs=32.6

Q ss_pred             cccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccC
Q 035649           11 SAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKK   48 (163)
Q Consensus        11 ~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtg   48 (163)
                      |.+|.....-..-|+|.+|+|.|....+|..|++-|.-
T Consensus       283 LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKP  320 (500)
T KOG3993|consen  283 LAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKP  320 (500)
T ss_pred             HhhccCCeeEEeeecCCcccccccCchhhhhhhcccCC
Confidence            56777776667789999999999999999999988853

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=80.87  E-value=1.1  Score=30.77  Aligned_cols=24  Identities=33%  Similarity=0.765  Sum_probs=21.2

Q ss_pred             eeeCCCCCccccCchhhhhhhhhc
Q 035649           23 VFPCLFCSRKFYSSQALGGHQNAH   46 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~HqriH   46 (163)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            699999999999999999999864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	163
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	6e-16

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 66.3 bits (162), Expect = 6e-16
 Identities = 18/34 (52%), Positives = 24/34 (70%)

Query: 21 PRVFPCLFCSRKFYSSQALGGHQNAHKKERTAAR 54
          PR + C FC R+F S+QALGGH N H+++R   R
Sbjct: 4  PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	163
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.87
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	98.86
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.79
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.77
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.76
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.75
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.74
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.74
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.73
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.73
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.73
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.72
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.72
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.72
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.72
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.72
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.71
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.71
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.71
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.71
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.71
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.71
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.71
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.7
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.7
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.7
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.7
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.7
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.7
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.69
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.69
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.69
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.69
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.69
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.69
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.69
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.68
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.68
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.68
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.68
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.68
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.67
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.67
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.67
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.66
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.66
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.65
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.65
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.65
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.65
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.65
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.64
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.63
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.62
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.62
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.61
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.61
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.61
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.61
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.58
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.57
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.57
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.49
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.47
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.46
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.46
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.45
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.4
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.39
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.38
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.36
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	98.32
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	98.31
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.31
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.28
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.27
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.25
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.24
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	98.24
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.23
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.22
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.22
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.22
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.2
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.19
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.19
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.18
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.17
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.17
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	98.13
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.11
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.1
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.1
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.09
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	98.06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	98.05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.04
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.04
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.03
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.03
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.03
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.01
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	98.0
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	97.99
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	97.99
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	97.98
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.98
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.97
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	97.97
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	97.97
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	97.97
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	97.96
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	97.96
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	97.96
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	97.96
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	97.95
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	97.94
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	97.94
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.17
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.17
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.91
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	97.91
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.9
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.9
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.9
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	97.89
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	97.89
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.86
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	97.85
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	97.84
2epa_A	72	Krueppel-like factor 10; transforming growth facto	97.84
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.82
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	97.81
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	97.8
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	97.8
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	97.79
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	97.77
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	97.73
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	97.73
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	97.73
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	97.72
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	97.71
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	97.7
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	97.69
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	97.69
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	97.68
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	97.67
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.82
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	97.64
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	97.63
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	97.63
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	97.61
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	97.6
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	97.58
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	97.58
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	97.55
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.53
2epa_A	72	Krueppel-like factor 10; transforming growth facto	97.52
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	97.48
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.48
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	97.4
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	97.38
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	97.36
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	97.35
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	97.28
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	97.23
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	97.12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	97.12
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.05
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	97.03
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	96.79
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	96.71
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	96.66
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	96.33
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.02
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.97
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.93
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	95.92
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	95.91
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	95.82
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	95.75
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.75
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	95.69
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	95.68
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	95.67
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	95.65
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.65
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	95.64
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.62
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.58
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	95.55
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	95.55
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.51
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	95.5
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.47
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	95.44
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	95.43
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.39
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.38
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	95.37
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	95.35
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.31
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.31
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.29
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	95.26
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.24
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.18
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.18
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.13
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	95.12
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.0
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.98
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.96
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	94.96
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.9
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	94.89
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	94.86
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	94.82
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	94.8
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.76
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.73
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	94.72
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.72
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.72
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.69
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.64
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.59
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	94.54
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.44
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.11
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	93.33
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	93.21
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	93.16
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	92.96
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	92.96
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	92.88
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	92.79
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	92.74
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	92.57
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	92.4
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	92.25
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	92.16
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	92.14
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	92.04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	91.87
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	91.72
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	91.7
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	91.69
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	91.47
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	91.4
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	91.27
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	91.16
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	91.02
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	90.9
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	90.89
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	90.87
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	90.83
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	90.61
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	90.24
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	90.11
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	89.92
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	89.85
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	89.84
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	89.81
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	89.58
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	89.41
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	89.16
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	89.15
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	89.02
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	88.84
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	88.61
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	87.35
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	86.91
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	86.3
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	85.63
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	85.45
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	83.73
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	82.42

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.87  E-value=6.9e-10  Score=69.54  Aligned_cols=51  Identities=12%  Similarity=0.166  Sum_probs=47.2

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      ++.+.....|..|.++|+++++|.|.+|++.|.....|..|+++|+++++|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            456777888999999999999999999999999999999999999999886

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=98.86  E-value=1.5e-10  Score=76.47  Aligned_cols=49  Identities=14%  Similarity=0.227  Sum_probs=44.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      |+.|.....|..|+++|++++||+|.+|++.|.....|..|+++|++|+
T Consensus        11 ~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C           11 GKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            5667888889999999999999999999999999999999999999875

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=3.9e-09  Score=63.12  Aligned_cols=40  Identities=18%  Similarity=0.303  Sum_probs=37.9

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGP   41 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCC
Confidence            5889999999999999999999999999999999999876

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=4.1e-09  Score=61.88  Aligned_cols=40  Identities=15%  Similarity=0.293  Sum_probs=37.6

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS   40 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            4788999999999999999999999999999999999876

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.76  E-value=4.9e-09  Score=61.66  Aligned_cols=40  Identities=23%  Similarity=0.416  Sum_probs=37.1

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPS   40 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCC
Confidence            6788999999999999999999999999999999998763

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=5.2e-09  Score=61.41  Aligned_cols=40  Identities=20%  Similarity=0.408  Sum_probs=37.1

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPS   40 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            6788999999999999999999999999999999998763

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=6.3e-09  Score=62.48  Aligned_cols=41  Identities=22%  Similarity=0.503  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSG   42 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCS
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCC
Confidence            58899999999999999999999999999999999998763

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.74  E-value=6.1e-09  Score=61.11  Aligned_cols=39  Identities=15%  Similarity=0.319  Sum_probs=36.9

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      |.++|+++++|+|.+|++.|.....|..|+++|+++++|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~   40 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS   40 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCC
Confidence            678899999999999999999999999999999999886

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=6.2e-09  Score=62.37  Aligned_cols=41  Identities=20%  Similarity=0.459  Sum_probs=38.5

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSG   42 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=5.5e-09  Score=62.89  Aligned_cols=41  Identities=22%  Similarity=0.481  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSG   42 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCS
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=7.1e-09  Score=61.68  Aligned_cols=41  Identities=20%  Similarity=0.406  Sum_probs=38.1

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|++++||+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS   42 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCC
Confidence            57889999999999999999999999999999999998763

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.74  E-value=6.1e-09  Score=62.67  Aligned_cols=41  Identities=24%  Similarity=0.499  Sum_probs=38.5

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSS
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            58899999999999999999999999999999999998874

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=7.1e-09  Score=62.38  Aligned_cols=41  Identities=22%  Similarity=0.457  Sum_probs=38.5

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSG   42 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTT
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6.4e-09  Score=62.59  Aligned_cols=41  Identities=22%  Similarity=0.427  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCS
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=4.7e-09  Score=61.75  Aligned_cols=39  Identities=15%  Similarity=0.340  Sum_probs=36.9

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      |.++|++++||+|.+|++.|.....|..|+++|+++++|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS   40 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSS
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            678899999999999999999999999999999999886

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7.1e-09  Score=61.40  Aligned_cols=41  Identities=20%  Similarity=0.403  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPS   42 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCC
Confidence            58889999999999999999999999999999999998763

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=4.6e-09  Score=63.09  Aligned_cols=42  Identities=19%  Similarity=0.357  Sum_probs=38.8

Q ss_pred             ccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           12 AEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        12 ~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ..|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en3_A            1 GSSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSG   42 (46)
T ss_dssp             CCCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSS
T ss_pred             CccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            368899999999999999999999999999999999988774

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6.3e-09  Score=62.49  Aligned_cols=41  Identities=17%  Similarity=0.416  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCC
Confidence            57889999999999999999999999999999999998874

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7.5e-09  Score=62.13  Aligned_cols=41  Identities=20%  Similarity=0.491  Sum_probs=38.4

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCC
Confidence            58899999999999999999999999999999999998764

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=5.5e-09  Score=61.87  Aligned_cols=41  Identities=20%  Similarity=0.326  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS   42 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCC
Confidence            58889999999999999999999999999999999998763

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7.6e-09  Score=61.95  Aligned_cols=41  Identities=17%  Similarity=0.447  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~   42 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSG   42 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcC
Confidence            57889999999999999999999999999999999998873

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.73  E-value=7.3e-09  Score=62.18  Aligned_cols=41  Identities=22%  Similarity=0.396  Sum_probs=38.4

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSG   42 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcC
Confidence            58899999999999999999999999999999999998864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=6.7e-09  Score=62.50  Aligned_cols=41  Identities=20%  Similarity=0.507  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSG   42 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7.4e-09  Score=62.02  Aligned_cols=41  Identities=22%  Similarity=0.452  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            57889999999999999999999999999999999998864

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6.7e-09  Score=62.35  Aligned_cols=41  Identities=20%  Similarity=0.433  Sum_probs=38.4

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=6.7e-09  Score=62.37  Aligned_cols=41  Identities=20%  Similarity=0.476  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            57889999999999999999999999999999999998874

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=6.9e-09  Score=62.29  Aligned_cols=41  Identities=24%  Similarity=0.387  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSG   42 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.72  E-value=7.8e-09  Score=61.90  Aligned_cols=41  Identities=17%  Similarity=0.366  Sum_probs=38.4

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58889999999999999999999999999999999998863

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=6.9e-09  Score=61.17  Aligned_cols=40  Identities=20%  Similarity=0.481  Sum_probs=37.3

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS   41 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTT
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            6788999999999999999999999999999999998863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=7.4e-09  Score=62.17  Aligned_cols=41  Identities=22%  Similarity=0.527  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            57889999999999999999999999999999999998874

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=8.4e-09  Score=62.07  Aligned_cols=41  Identities=24%  Similarity=0.520  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSS
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=7.3e-09  Score=62.33  Aligned_cols=41  Identities=22%  Similarity=0.499  Sum_probs=38.4

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=8.4e-09  Score=61.77  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=38.4

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTS
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            58899999999999999999999999999999999998874

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=8.3e-09  Score=62.07  Aligned_cols=41  Identities=22%  Similarity=0.470  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58889999999999999999999999999999999998863

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=7.4e-09  Score=62.00  Aligned_cols=41  Identities=20%  Similarity=0.427  Sum_probs=38.5

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58899999999999999999999999999999999998874

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=8.3e-09  Score=61.93  Aligned_cols=41  Identities=17%  Similarity=0.446  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCC
Confidence            57889999999999999999999999999999999998874

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=9.7e-09  Score=61.49  Aligned_cols=41  Identities=17%  Similarity=0.352  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSG   42 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            58899999999999999999999999999999999998763

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=8.1e-09  Score=61.84  Aligned_cols=41  Identities=20%  Similarity=0.431  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.71  E-value=8.5e-09  Score=61.89  Aligned_cols=41  Identities=20%  Similarity=0.459  Sum_probs=38.4

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSG   42 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCS
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=8.7e-09  Score=61.85  Aligned_cols=41  Identities=20%  Similarity=0.425  Sum_probs=38.4

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSG   42 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCC
Confidence            58889999999999999999999999999999999998864

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=8.3e-09  Score=61.94  Aligned_cols=41  Identities=20%  Similarity=0.441  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCS
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCC
Confidence            58899999999999999999999999999999999998764

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=8e-09  Score=61.86  Aligned_cols=41  Identities=20%  Similarity=0.337  Sum_probs=38.4

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            58899999999999999999999999999999999998863

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=7.2e-09  Score=62.06  Aligned_cols=41  Identities=20%  Similarity=0.463  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   42 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSG   42 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSS
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=8.8e-09  Score=61.83  Aligned_cols=41  Identities=20%  Similarity=0.435  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSG   42 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=7.2e-09  Score=61.65  Aligned_cols=41  Identities=17%  Similarity=0.398  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPS   42 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCS
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            57889999999999999999999999999999999998863

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.70  E-value=5.8e-09  Score=60.73  Aligned_cols=38  Identities=47%  Similarity=0.946  Sum_probs=34.5

Q ss_pred             CCCCceeeCCCCCccccCchhhhhhhhhccCccchHHh
Q 035649           18 DSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARK   55 (163)
Q Consensus        18 HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a~r   55 (163)
                      |+++++|+|.+|++.|.....|..|+++|+++++|.++
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            57789999999999999999999999999999998754

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=9e-09  Score=61.78  Aligned_cols=41  Identities=20%  Similarity=0.414  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCC
Confidence            57889999999999999999999999999999999998864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=8e-09  Score=62.02  Aligned_cols=41  Identities=20%  Similarity=0.435  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSS
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1e-08  Score=61.70  Aligned_cols=41  Identities=20%  Similarity=0.481  Sum_probs=37.7

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            36788999999999999999999999999999999998864

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=8e-09  Score=61.85  Aligned_cols=41  Identities=17%  Similarity=0.458  Sum_probs=38.4

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSG   42 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCC
Confidence            58899999999999999999999999999999999998863

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=9.3e-09  Score=61.70  Aligned_cols=41  Identities=20%  Similarity=0.485  Sum_probs=38.4

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSG   42 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            58889999999999999999999999999999999998864

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.70  E-value=1e-08  Score=61.65  Aligned_cols=41  Identities=22%  Similarity=0.498  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCS
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998864

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=9.5e-09  Score=61.53  Aligned_cols=41  Identities=24%  Similarity=0.391  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSG   42 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCC
Confidence            58889999999999999999999999999999999998864

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=6.3e-09  Score=61.77  Aligned_cols=41  Identities=17%  Similarity=0.396  Sum_probs=38.1

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|.++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPS   42 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            58889999999999999999999999999999999988763

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=8e-09  Score=62.29  Aligned_cols=41  Identities=22%  Similarity=0.497  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSG   42 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCT
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=8.7e-09  Score=61.85  Aligned_cols=41  Identities=15%  Similarity=0.417  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSG   42 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCC
Confidence            57889999999999999999999999999999999998863

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=8.2e-09  Score=61.96  Aligned_cols=41  Identities=22%  Similarity=0.473  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSS
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCC
Confidence            58889999999999999999999999999999999998864

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.70  E-value=8.8e-09  Score=61.97  Aligned_cols=41  Identities=20%  Similarity=0.444  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            58889999999999999999999999999999999998864

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1e-08  Score=61.63  Aligned_cols=41  Identities=22%  Similarity=0.455  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSG   42 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            57889999999999999999999999999999999998864

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.1e-08  Score=61.38  Aligned_cols=41  Identities=24%  Similarity=0.523  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSG   42 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=7.4e-09  Score=62.16  Aligned_cols=41  Identities=17%  Similarity=0.447  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSS
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCC
Confidence            57889999999999999999999999999999999998874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.3e-08  Score=60.45  Aligned_cols=41  Identities=17%  Similarity=0.354  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPS   42 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTT
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcC
Confidence            57889999999999999999999999999999999998873

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1e-08  Score=61.53  Aligned_cols=41  Identities=20%  Similarity=0.419  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCC
Confidence            57889999999999999999999999999999999998874

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=8.9e-09  Score=61.79  Aligned_cols=41  Identities=20%  Similarity=0.494  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSG   42 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSS
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.1e-08  Score=61.35  Aligned_cols=41  Identities=17%  Similarity=0.414  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSG   42 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSS
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.69  E-value=1.2e-08  Score=61.39  Aligned_cols=41  Identities=20%  Similarity=0.409  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSG   42 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCS
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=9.9e-09  Score=61.74  Aligned_cols=41  Identities=24%  Similarity=0.502  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCS
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=7.9e-09  Score=62.17  Aligned_cols=41  Identities=20%  Similarity=0.460  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSG   42 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSS
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            57889999999999999999999999999999999998874

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=8.9e-09  Score=61.65  Aligned_cols=41  Identities=17%  Similarity=0.422  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSG   42 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCS
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            57889999999999999999999999999999999998864

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=9.8e-09  Score=61.07  Aligned_cols=40  Identities=28%  Similarity=0.488  Sum_probs=37.2

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSG   40 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCS
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            6788999999999999999999999999999999998864

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=8.6e-09  Score=61.87  Aligned_cols=41  Identities=20%  Similarity=0.390  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCS
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            58899999999999999999999999999999999998864

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=9.9e-09  Score=61.59  Aligned_cols=41  Identities=20%  Similarity=0.416  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSS
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCC
Confidence            57889999999999999999999999999999999998874

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1.2e-08  Score=61.29  Aligned_cols=41  Identities=20%  Similarity=0.434  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            57889999999999999999999999999999999998764

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1.3e-08  Score=60.94  Aligned_cols=41  Identities=24%  Similarity=0.474  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCS
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCC
Confidence            58889999999999999999999999999999999998764

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=9.7e-09  Score=61.79  Aligned_cols=41  Identities=22%  Similarity=0.407  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSG   42 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCC
Confidence            58899999999999999999999999999999999988763

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.1e-08  Score=61.59  Aligned_cols=41  Identities=20%  Similarity=0.373  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSG   42 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCC
Confidence            57889999999999999999999999999999999998863

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.68  E-value=1.9e-09  Score=70.91  Aligned_cols=51  Identities=16%  Similarity=0.277  Sum_probs=42.6

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      |+.|.....|..|.++|+++++|+|.+|++.|.....|..|+++|++++||
T Consensus        24 ~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           24 QASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             SCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            455667777888888888888999999999999988999999888888765

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.1e-08  Score=61.17  Aligned_cols=41  Identities=22%  Similarity=0.426  Sum_probs=38.1

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|.++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSG   42 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCC
Confidence            58889999999999999999999999999999999988763

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.2e-08  Score=61.30  Aligned_cols=41  Identities=22%  Similarity=0.408  Sum_probs=37.9

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSG   42 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCC
Confidence            37789999999999999999999999999999999998864

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.68  E-value=1.4e-08  Score=60.73  Aligned_cols=41  Identities=20%  Similarity=0.426  Sum_probs=38.1

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSG   42 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCS
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998764

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=1.1e-08  Score=61.30  Aligned_cols=41  Identities=20%  Similarity=0.499  Sum_probs=38.0

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCS
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCC
Confidence            37789999999999999999999999999999999998864

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.5e-08  Score=60.98  Aligned_cols=41  Identities=20%  Similarity=0.469  Sum_probs=38.0

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccC-ccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKK-ERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtg-ERp~a   53 (163)
                      .|.++|++++||+|.+|++.|.....|..|+++|++ +++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~   43 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGP   43 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSS
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCC
Confidence            478899999999999999999999999999999999 88763

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=1.3e-08  Score=61.09  Aligned_cols=41  Identities=24%  Similarity=0.522  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            57889999999999999999999999999999999998763

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.4e-08  Score=61.08  Aligned_cols=41  Identities=27%  Similarity=0.452  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSS
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            57889999999999999999999999999999999998863

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=9.9e-09  Score=61.45  Aligned_cols=41  Identities=17%  Similarity=0.436  Sum_probs=38.3

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|.|.+|++.|.....|..|+++|.++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSG   42 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            58899999999999999999999999999999999998763

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.2e-08  Score=61.20  Aligned_cols=41  Identities=22%  Similarity=0.484  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSG   42 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=7.8e-09  Score=62.20  Aligned_cols=41  Identities=27%  Similarity=0.534  Sum_probs=38.1

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSG   42 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            57889999999999999999999999999999999988764

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.6e-08  Score=60.63  Aligned_cols=41  Identities=20%  Similarity=0.357  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG   42 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.1e-08  Score=61.17  Aligned_cols=41  Identities=20%  Similarity=0.474  Sum_probs=38.1

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSG   42 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            57889999999999999999999999999999999988763

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.6e-08  Score=60.67  Aligned_cols=41  Identities=17%  Similarity=0.441  Sum_probs=38.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhh-hccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQN-AHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~Hqr-iHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|++ +|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~   43 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSG   43 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSS
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCC
Confidence            58899999999999999999999999999999 999998864

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.6e-08  Score=60.86  Aligned_cols=41  Identities=20%  Similarity=0.424  Sum_probs=38.0

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSG   42 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCC
Confidence            47889999999999999999999999999999999998764

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.8e-08  Score=60.07  Aligned_cols=40  Identities=23%  Similarity=0.318  Sum_probs=37.2

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |.++|+++++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPS   42 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCC
Confidence            6788999999999999999999999999999999998863

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.62  E-value=8.8e-09  Score=68.18  Aligned_cols=51  Identities=16%  Similarity=0.348  Sum_probs=42.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      |+.|.....|..|.++|+++++|+|.+|++.|.....|..|+++|+++++|
T Consensus        25 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~   75 (77)
T 2cot_A           25 GKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS   75 (77)
T ss_dssp             CCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCC
T ss_pred             CcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            455666777888888888888999999999999999999999889888876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.5e-08  Score=60.78  Aligned_cols=41  Identities=22%  Similarity=0.451  Sum_probs=37.9

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCC
Confidence            47789999999999999999999999999999999998763

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.61  E-value=2.9e-08  Score=56.61  Aligned_cols=37  Identities=24%  Similarity=0.393  Sum_probs=34.2

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCc
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      .|.++|++++||+|.+|++.|.....|..|+++|+++
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            3788999999999999999999999999999999764

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.8e-08  Score=60.29  Aligned_cols=40  Identities=23%  Similarity=0.513  Sum_probs=37.0

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      +.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGP   42 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCC
Confidence            5678999999999999999999999999999999998874

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=2.8e-08  Score=58.17  Aligned_cols=37  Identities=24%  Similarity=0.470  Sum_probs=34.9

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      ++|+++++|+|.+|++.|.....|..|+++|+++++|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   39 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS   39 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCS
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCc
Confidence            5789999999999999999999999999999999886

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.6e-08  Score=60.99  Aligned_cols=41  Identities=17%  Similarity=0.454  Sum_probs=37.8

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSG   42 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            37789999999999999999999999999999999998764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=2e-08  Score=57.31  Aligned_cols=36  Identities=22%  Similarity=0.495  Sum_probs=33.6

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhhhccCccc
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERT   51 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp   51 (163)
                      ++|+++++|+|.+|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999998874

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=2.9e-08  Score=59.76  Aligned_cols=40  Identities=18%  Similarity=0.352  Sum_probs=36.9

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ++++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCC
Confidence            4678999999999999999999999999999999998874

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.57  E-value=4.2e-08  Score=55.26  Aligned_cols=35  Identities=23%  Similarity=0.431  Sum_probs=32.3

Q ss_pred             CCCCCceeeCCCCCccccCchhhhhhhhhccCccc
Q 035649           17 DDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERT   51 (163)
Q Consensus        17 ~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp   51 (163)
                      +|+++++|+|.+|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47889999999999999999999999999998764

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=3.5e-08  Score=59.12  Aligned_cols=40  Identities=20%  Similarity=0.463  Sum_probs=37.0

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ++++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCS
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCC
Confidence            4678999999999999999999999999999999998764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.56  E-value=4.2e-08  Score=55.00  Aligned_cols=35  Identities=26%  Similarity=0.415  Sum_probs=32.2

Q ss_pred             CCCCCceeeCCCCCccccCchhhhhhhhhccCccc
Q 035649           17 DDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERT   51 (163)
Q Consensus        17 ~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp   51 (163)
                      +|+++++|+|.+|++.|.....|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47889999999999999999999999999998864

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.49  E-value=6.6e-08  Score=57.49  Aligned_cols=38  Identities=18%  Similarity=0.351  Sum_probs=35.2

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGP   40 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCcc
Confidence            57889999999999999999999999999999998874

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=8e-08  Score=54.85  Aligned_cols=35  Identities=29%  Similarity=0.465  Sum_probs=32.2

Q ss_pred             CCCCCCceeeCCCCCccccCc-hhhhhhhhhccCcc
Q 035649           16 VDDSSPRVFPCLFCSRKFYSS-QALGGHQNAHKKER   50 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsss-qsL~~HqriHtgER   50 (163)
                      ++|+++++|+|.+|++.|... ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            578999999999999999999 99999999998764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.47  E-value=2.4e-08  Score=61.99  Aligned_cols=49  Identities=14%  Similarity=0.327  Sum_probs=44.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      |+.|.....|..|.++|+++++|.|.+|++.|.....|..|+++|.+++
T Consensus         8 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            8 GIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             cCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            5667778889999999999999999999999999999999999998765

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=4.2e-08  Score=58.89  Aligned_cols=40  Identities=20%  Similarity=0.438  Sum_probs=36.7

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .+++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSG   42 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCS
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            4678999999999999999999999999999999988764

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=1.1e-07  Score=57.08  Aligned_cols=41  Identities=20%  Similarity=0.462  Sum_probs=37.6

Q ss_pred             cCCCCCCCCceeeCC--CCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCL--FCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~--~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.++|+++++|+|.  .|++.|.....|..|+++|+++++|.
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   44 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSG   44 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCS
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            467889999999998  89999999999999999999998874

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.45  E-value=2.2e-08  Score=65.11  Aligned_cols=50  Identities=14%  Similarity=0.175  Sum_probs=38.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERT   51 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp   51 (163)
                      |+.|.....|..|.++|+++++|+|.+|++.|.....|..|++.|.++++
T Consensus        16 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A           16 SYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            34556666777888888888888888888888888888888888877665

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.2e-07  Score=53.51  Aligned_cols=35  Identities=26%  Similarity=0.339  Sum_probs=32.1

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      .+|+++++|+|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            46889999999999999999999999999998864

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.3e-07  Score=53.61  Aligned_cols=35  Identities=31%  Similarity=0.505  Sum_probs=32.2

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      ++|++++||+|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            46889999999999999999999999999998764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=1.3e-07  Score=53.60  Aligned_cols=35  Identities=26%  Similarity=0.427  Sum_probs=32.0

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      +.|++++||+|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            46788999999999999999999999999998764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.40  E-value=6.7e-08  Score=54.61  Aligned_cols=32  Identities=25%  Similarity=0.445  Sum_probs=30.2

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      +||+|.+|++.|.....|..|+++|+++++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58999999999999999999999999999885

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.39  E-value=4.7e-08  Score=68.56  Aligned_cols=38  Identities=18%  Similarity=0.203  Sum_probs=25.3

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ..+...++|.|.+|++.|.....|..|+++|+++++|.
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~   58 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFP   58 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEE
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccC
Confidence            34445566777777777777777777777777766664

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=2.2e-07  Score=52.39  Aligned_cols=35  Identities=29%  Similarity=0.481  Sum_probs=32.0

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      ..|+++++|+|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            2 SSGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            36788999999999999999999999999998874

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.38  E-value=1.3e-07  Score=56.45  Aligned_cols=38  Identities=16%  Similarity=0.380  Sum_probs=35.1

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ..|+++++|+|.+|++.|.....|..|+++|++++++.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~   40 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKS   40 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCC
Confidence            46889999999999999999999999999999998764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=2.1e-07  Score=53.51  Aligned_cols=34  Identities=21%  Similarity=0.325  Sum_probs=31.3

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhh-hhhccCc
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGH-QNAHKKE   49 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~H-qriHtgE   49 (163)
                      ++|++++||+|.+|++.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            578999999999999999999999999 8999764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.36  E-value=1.6e-07  Score=53.86  Aligned_cols=35  Identities=23%  Similarity=0.409  Sum_probs=32.4

Q ss_pred             CCCCceeeCC--CCCccccCchhhhhhhhhccCccch
Q 035649           18 DSSPRVFPCL--FCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus        18 HTg~KPfkC~--~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      |+++++|+|.  .|++.|.....|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5788999999  5999999999999999999999876

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=3.6e-07  Score=51.73  Aligned_cols=34  Identities=29%  Similarity=0.673  Sum_probs=31.3

Q ss_pred             CCCCCceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           17 DDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        17 ~HTg~KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      .|+++++|+|.+|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            5778899999999999999999999999998764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=98.32  E-value=1.1e-07  Score=65.67  Aligned_cols=49  Identities=18%  Similarity=0.342  Sum_probs=25.7

Q ss_pred             CCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649            4 DHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus         4 ~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      .|.....|..|.+.|+++++|.|.+|++.|.....|..|+++|.++++|
T Consensus        26 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   74 (106)
T 2ee8_A           26 HFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF   74 (106)
T ss_dssp             BCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTT
T ss_pred             ccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCe
Confidence            3444444555555555555555555555555555555555555555444

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=98.31  E-value=2e-07  Score=61.30  Aligned_cols=34  Identities=32%  Similarity=0.614  Sum_probs=32.2

Q ss_pred             CCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           20 SPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        20 g~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .+|||+|.+|++.|.....|..|+++|++++||.
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~   34 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRS   34 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEE
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeE
Confidence            3799999999999999999999999999999986

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.31  E-value=6.2e-08  Score=63.35  Aligned_cols=41  Identities=24%  Similarity=0.397  Sum_probs=31.9

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .+.++|+++++|+|.+|++.|.....|..|+++|.++++|.
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~   44 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYK   44 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEE
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeE
Confidence            45667788888888888888888888888888888777764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.28  E-value=3.8e-07  Score=55.92  Aligned_cols=36  Identities=17%  Similarity=0.481  Sum_probs=29.9

Q ss_pred             CCCCCceeeCCCCCccccCchhhhhhhh-hccCccch
Q 035649           17 DDSSPRVFPCLFCSRKFYSSQALGGHQN-AHKKERTA   52 (163)
Q Consensus        17 ~HTg~KPfkC~~CgksFsssqsL~~Hqr-iHtgERp~   52 (163)
                      +|++++||+|.+|++.|.....|..|++ +|+++..-
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            4789999999999999999999999999 99987544

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.27  E-value=1.7e-07  Score=58.77  Aligned_cols=48  Identities=19%  Similarity=0.354  Sum_probs=42.6

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhh-hhccCc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQ-NAHKKE   49 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~Hq-riHtgE   49 (163)
                      |+.|.....|..|.++|+++++|.|.+|++.|.....|..|+ ++|.++
T Consensus         9 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            9 TRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             ccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            556777788999999999999999999999999999999996 788765

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=5.8e-07  Score=54.18  Aligned_cols=33  Identities=21%  Similarity=0.268  Sum_probs=30.6

Q ss_pred             CCCCCceeeCCC--CCccccCchhhhhhhhhccCc
Q 035649           17 DDSSPRVFPCLF--CSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        17 ~HTg~KPfkC~~--CgksFsssqsL~~HqriHtgE   49 (163)
                      .+++++||+|.+  |++.|.....|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            578899999986  999999999999999999876

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.25  E-value=4.8e-07  Score=54.99  Aligned_cols=41  Identities=24%  Similarity=0.503  Sum_probs=35.6

Q ss_pred             ccccCCCCCCCCceeeCC--CCCccccCchhhhhhhhhccCcc
Q 035649           10 VSAEANVDDSSPRVFPCL--FCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        10 ~~~~h~~~HTg~KPfkC~--~CgksFsssqsL~~HqriHtgER   50 (163)
                      .+..|...|++++||+|.  .|++.|.....|..|+++|++++
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            445566779999999996  79999999999999999998874

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.24  E-value=7.4e-07  Score=58.71  Aligned_cols=44  Identities=18%  Similarity=0.349  Sum_probs=38.5

Q ss_pred             ccccCCCCCCCCceeeCCCCCccccCchhhhhhhh-hccCc-cchH
Q 035649           10 VSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQN-AHKKE-RTAA   53 (163)
Q Consensus        10 ~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~Hqr-iHtgE-Rp~a   53 (163)
                      ++..|.++|+++++|+|.+|++.|.....|..|++ .|.++ ++|.
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~   47 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFH   47 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEE
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccC
Confidence            57789999999999999999999999999999997 67764 5553

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=98.24  E-value=6.2e-08  Score=72.27  Aligned_cols=52  Identities=17%  Similarity=0.179  Sum_probs=35.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|.....|..|.++|+++++|+|.+|++.|.....|..|+++|++++++.
T Consensus        29 ~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   80 (133)
T 2lt7_A           29 KRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQ   80 (133)
T ss_dssp             CCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEE
T ss_pred             CCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCcccc
Confidence            3445555666677777777777777777777777777777777777766654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.23  E-value=1.1e-07  Score=62.46  Aligned_cols=52  Identities=17%  Similarity=0.289  Sum_probs=46.0

Q ss_pred             CCCCCCCcccccCCC-CCCCCceeeCCC--CCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANV-DDSSPRVFPCLF--CSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~-~HTg~KPfkC~~--CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|.....|..|.+ .|+++++|+|.+  |++.|.....|..|+++|+++++|.
T Consensus        16 ~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~   70 (79)
T 2dlk_A           16 GRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI   70 (79)
T ss_dssp             CCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred             cCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCee
Confidence            455667778889998 799999999999  9999999999999999999988764

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.22  E-value=1.2e-07  Score=64.35  Aligned_cols=52  Identities=12%  Similarity=0.046  Sum_probs=45.5

Q ss_pred             CCCCCCCcccccCCCC-CCCCce--------eeCCCCCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANVD-DSSPRV--------FPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~-HTg~KP--------fkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|.....|..|.++ |+++++        |.|.+|++.|.....|..|+++|+++++|.
T Consensus        32 ~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   92 (95)
T 2ej4_A           32 DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGP   92 (95)
T ss_dssp             CCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCS
T ss_pred             ccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            4567777788899887 888887        999999999999999999999999998874

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.22  E-value=1.3e-07  Score=68.29  Aligned_cols=52  Identities=13%  Similarity=0.047  Sum_probs=44.1

Q ss_pred             CCCCCCCcccccCCC-CC---CCCceeeCCCCCccccCchhhhhh-hhhccCccchH
Q 035649            2 GDDHHRGKVSAEANV-DD---SSPRVFPCLFCSRKFYSSQALGGH-QNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~-~H---Tg~KPfkC~~CgksFsssqsL~~H-qriHtgERp~a   53 (163)
                      |+.|.....|..|.+ .|   ++++||+|.+|++.|.....|..| +++|+++++|.
T Consensus        25 gk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~   81 (102)
T 2ghf_A           25 TFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFK   81 (102)
T ss_dssp             SCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEE
T ss_pred             CCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCee
Confidence            455667777888986 58   568899999999999999999999 89999999886

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.22  E-value=6.7e-07  Score=54.19  Aligned_cols=38  Identities=18%  Similarity=0.399  Sum_probs=34.8

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ..++.+++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   42 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCcc
Confidence            45788899999999999999999999999999998874

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.20  E-value=1.1e-07  Score=58.87  Aligned_cols=46  Identities=15%  Similarity=0.210  Sum_probs=31.3

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhcc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      |+.|.....|..|.++|+++++|.|.+|++.|.....|..|++.|.
T Consensus        11 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C           11 GKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             CCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             cchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            3445555666677777777777777777777777777777776653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.19  E-value=1.1e-07  Score=53.26  Aligned_cols=31  Identities=26%  Similarity=0.431  Sum_probs=29.2

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      +||+|.+|++.|.....|..|+++|++++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999999876

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=5.6e-08  Score=67.74  Aligned_cols=46  Identities=13%  Similarity=0.078  Sum_probs=36.7

Q ss_pred             CcccccCCCCCCCCceeeCCCCCcccc-CchhhhhhhhhccC-ccchH
Q 035649            8 GKVSAEANVDDSSPRVFPCLFCSRKFY-SSQALGGHQNAHKK-ERTAA   53 (163)
Q Consensus         8 ~~~~~~h~~~HTg~KPfkC~~CgksFs-ssqsL~~HqriHtg-ERp~a   53 (163)
                      ...+..|.++|+++++|+|.+|++.|. ....|..|+++|.+ +++|.
T Consensus         9 ~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~   56 (98)
T 2gqj_A            9 GGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALK   56 (98)
T ss_dssp             CCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHS
T ss_pred             CCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEE
Confidence            344567788888888888888888888 88888888888877 66665

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.18  E-value=9.1e-07  Score=50.79  Aligned_cols=34  Identities=24%  Similarity=0.451  Sum_probs=30.8

Q ss_pred             CCCCCceeeCCC--CCccccCchhhhhhhhhccCcc
Q 035649           17 DDSSPRVFPCLF--CSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        17 ~HTg~KPfkC~~--CgksFsssqsL~~HqriHtgER   50 (163)
                      .|+++++|.|.+  |++.|.....|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            478899999995  9999999999999999998864

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.17  E-value=1.3e-06  Score=56.94  Aligned_cols=49  Identities=20%  Similarity=0.423  Sum_probs=43.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      |+.|.....|..|.++|+++++|+|.+|++.|.....|..|+++|+++.
T Consensus        21 ~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           21 GKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            4556677788999999999999999999999999999999999998764

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.17  E-value=1.3e-07  Score=63.21  Aligned_cols=51  Identities=22%  Similarity=0.326  Sum_probs=35.8

Q ss_pred             CCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649            3 DDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         3 ~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ..|.....|..|.++|+++++|.|..|++.|.....|..|++.|.++++|.
T Consensus        14 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   64 (90)
T 1a1h_A           14 RRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA   64 (90)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEE
T ss_pred             CccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCcc
Confidence            345555566677777777777777777777777777777777777766654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.13  E-value=1.4e-06  Score=46.41  Aligned_cols=30  Identities=20%  Similarity=0.568  Sum_probs=27.5

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999998764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.13  E-value=6.2e-07  Score=60.71  Aligned_cols=52  Identities=19%  Similarity=0.240  Sum_probs=44.3

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|.....|..|.+.|+++++|.|.+|++.|.....|..|++.|.++++|.
T Consensus        15 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   66 (96)
T 2dmd_A           15 GKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK   66 (96)
T ss_dssp             TBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEE
T ss_pred             CCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCcc
Confidence            4456667778899999999999999999999999999999999998887764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.12  E-value=2.6e-07  Score=65.09  Aligned_cols=39  Identities=13%  Similarity=0.124  Sum_probs=19.7

Q ss_pred             cCCCCCCCCceeeCCCCCccc-cCchhhhhhhhhccCccch
Q 035649           13 EANVDDSSPRVFPCLFCSRKF-YSSQALGGHQNAHKKERTA   52 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksF-sssqsL~~HqriHtgERp~   52 (163)
                      .|++.++++++|+|.+|++.| .....|..|+++| ++++|
T Consensus        24 ~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~   63 (96)
T 2ctd_A           24 QWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMF   63 (96)
T ss_dssp             HHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCC
T ss_pred             HHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCe
Confidence            344444445555555555555 4555555555555 44444

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=2.7e-06  Score=59.60  Aligned_cols=44  Identities=25%  Similarity=0.425  Sum_probs=40.2

Q ss_pred             CCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCc
Q 035649            6 HRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus         6 ~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      .....|..|.++|+++++|+|.+|++.|.....|..|++.|...
T Consensus        63 ~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           63 PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             CCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             ccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence            77788999999999999999999999999999999999887543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.10  E-value=1.5e-06  Score=60.56  Aligned_cols=39  Identities=28%  Similarity=0.331  Sum_probs=34.3

Q ss_pred             CCCCCCCceeeCCC--CCccccCchhhhhhh-hhccCccchH
Q 035649           15 NVDDSSPRVFPCLF--CSRKFYSSQALGGHQ-NAHKKERTAA   53 (163)
Q Consensus        15 ~~~HTg~KPfkC~~--CgksFsssqsL~~Hq-riHtgERp~a   53 (163)
                      ....+++|||+|.+  |++.|.....|..|+ ++|++++|+.
T Consensus        19 ~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~   60 (73)
T 1x3c_A           19 PTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAF   60 (73)
T ss_dssp             SSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCC
T ss_pred             cccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcc
Confidence            34568999999976  999999999999997 6899999874

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.10  E-value=1.8e-07  Score=60.87  Aligned_cols=39  Identities=26%  Similarity=0.425  Sum_probs=32.7

Q ss_pred             CCCCCCCceeeCC--CCCccccCchhhhhhhhhccCccchH
Q 035649           15 NVDDSSPRVFPCL--FCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        15 ~~~HTg~KPfkC~--~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ..+++++++|.|.  .|++.|.....|..|+++|.++++|.
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~   51 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQ   51 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEE
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeE
Confidence            4567788899997  59999999999999999998888765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.09  E-value=1.8e-06  Score=45.99  Aligned_cols=29  Identities=28%  Similarity=0.525  Sum_probs=26.8

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999998764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.09  E-value=2.5e-06  Score=56.39  Aligned_cols=40  Identities=18%  Similarity=0.361  Sum_probs=35.6

Q ss_pred             ccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCc
Q 035649           10 VSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        10 ~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      ++..|.++|+++++|.|.+|++.|.....|..|++.|..+
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~   41 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   41 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence            6778999999999999999999999999999999876554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.07  E-value=4e-06  Score=58.58  Aligned_cols=49  Identities=29%  Similarity=0.519  Sum_probs=44.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhh-hhccCcc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQ-NAHKKER   50 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~Hq-riHtgER   50 (163)
                      |+.|.....|..|.++|++++||+|.+|++.|.....|..|+ ++|++|.
T Consensus        35 gk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           35 GESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            567888889999999999999999999999999999999996 6788764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.06  E-value=5.1e-07  Score=61.12  Aligned_cols=50  Identities=18%  Similarity=0.179  Sum_probs=43.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERT   51 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp   51 (163)
                      |..|.....|..|.++|+++++|+|.+|++.|.....|..|+++|.++++
T Consensus        43 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           43 DYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             CCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             CCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            34556667788999999999999999999999999999999999988754

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=98.05  E-value=5.9e-07  Score=62.01  Aligned_cols=49  Identities=20%  Similarity=0.359  Sum_probs=29.1

Q ss_pred             CCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649            4 DHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus         4 ~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      .|.....|..|.++|+++++|+|.+|++.|.....|..|+++|.+++++
T Consensus        54 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  102 (106)
T 2ee8_A           54 AFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSP  102 (106)
T ss_dssp             BCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCC
T ss_pred             hhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCC
Confidence            3444455556666666666666666666666666666666666655544

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.04  E-value=3.2e-06  Score=52.58  Aligned_cols=39  Identities=26%  Similarity=0.500  Sum_probs=34.9

Q ss_pred             CCCCCCCceeeCCCCCccccCchhhhhhhh-hccCccchH
Q 035649           15 NVDDSSPRVFPCLFCSRKFYSSQALGGHQN-AHKKERTAA   53 (163)
Q Consensus        15 ~~~HTg~KPfkC~~CgksFsssqsL~~Hqr-iHtgERp~a   53 (163)
                      ...++++++|.|.+|++.|.....|..|++ +|.++++|.
T Consensus         4 ~~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~   43 (54)
T 2eps_A            4 GSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK   43 (54)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCcc
Confidence            346788999999999999999999999997 999998875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.04  E-value=6.5e-07  Score=65.77  Aligned_cols=50  Identities=22%  Similarity=0.372  Sum_probs=26.8

Q ss_pred             CCCCCcccccCCCCCCCCceeeCCC--CCccccCchhhhhhhhhccCccchH
Q 035649            4 DHHRGKVSAEANVDDSSPRVFPCLF--CSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         4 ~~~~~~~~~~h~~~HTg~KPfkC~~--CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.....|..|.++|+++++|.|.+  |++.|.....|..|+++|.++++|.
T Consensus        71 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~  122 (155)
T 2rpc_A           71 SFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK  122 (155)
T ss_dssp             CCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBC
T ss_pred             ccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCcc
Confidence            3444444555555555555555555  5555555555555555555555543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.04  E-value=2.7e-06  Score=57.26  Aligned_cols=38  Identities=18%  Similarity=0.423  Sum_probs=33.5

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccc
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERT   51 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp   51 (163)
                      +...+.+++||+|.+|++.|.....|..|+++|++++.
T Consensus         4 ~~~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            4 GSSGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CSCSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            34568889999999999999999999999999998643

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.04  E-value=2.3e-06  Score=45.41  Aligned_cols=29  Identities=34%  Similarity=0.707  Sum_probs=26.6

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            47999999999999999999999998764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.03  E-value=1.9e-06  Score=60.31  Aligned_cols=42  Identities=24%  Similarity=0.354  Sum_probs=38.7

Q ss_pred             ccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           12 AEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        12 ~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ..+.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus        14 ~~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~   55 (88)
T 1x6f_A           14 ILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKR   55 (88)
T ss_dssp             CCCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHH
T ss_pred             eccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcc
Confidence            455778999999999999999999999999999999999986

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.03  E-value=3.8e-07  Score=63.54  Aligned_cols=50  Identities=24%  Similarity=0.338  Sum_probs=36.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhh-hccCccch
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQN-AHKKERTA   52 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~Hqr-iHtgERp~   52 (163)
                      |+.|.....|..|.+ |+++++|+|.+|++.|.....|..|++ +|.+++++
T Consensus        49 ~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~   99 (107)
T 1wjp_A           49 SLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMA   99 (107)
T ss_dssp             CCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCC
T ss_pred             CCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCC
Confidence            345566666777775 777888888888888888888888875 77777665

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.03  E-value=2e-06  Score=45.56  Aligned_cols=29  Identities=28%  Similarity=0.515  Sum_probs=26.7

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      +||+|.+|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=2.2e-06  Score=45.19  Aligned_cols=29  Identities=24%  Similarity=0.502  Sum_probs=26.6

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      +||+|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999998764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=98.00  E-value=3.5e-07  Score=59.94  Aligned_cols=52  Identities=21%  Similarity=0.484  Sum_probs=44.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.+.....|..|.++|+++++|.|..|++.|.....|..|++.|.+++++.
T Consensus         8 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   59 (82)
T 2kmk_A            8 GKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK   59 (82)
T ss_dssp             CCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEE
T ss_pred             cccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCc
Confidence            4556667778889888999999999999999999999999999998887764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=97.99  E-value=4.5e-07  Score=67.57  Aligned_cols=51  Identities=14%  Similarity=0.348  Sum_probs=45.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      |+.|.....|..|.++|++++||.|.+|++.|.....|..|++.|.+++|+
T Consensus        57 ~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           57 EKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPS  107 (133)
T ss_dssp             SCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTT
T ss_pred             CeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCC
Confidence            456777888999999999999999999999999999999999999887764

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=97.99  E-value=3.8e-07  Score=60.93  Aligned_cols=49  Identities=20%  Similarity=0.363  Sum_probs=40.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      |..|.....|..|.++|+++++|.|.+|++.|.....|..|+++|++++
T Consensus        41 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           41 MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            3456666778888888999999999999999999999999999998875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.98  E-value=1.1e-06  Score=59.26  Aligned_cols=51  Identities=14%  Similarity=0.285  Sum_probs=42.6

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCc--cch
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKE--RTA   52 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgE--Rp~   52 (163)
                      |+.|.....|..|.++|+++++|.|.+|++.|.....|..|++.|.++  ++|
T Consensus        14 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   66 (95)
T 2yt9_A           14 GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY   66 (95)
T ss_dssp             CCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSB
T ss_pred             CCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCce
Confidence            455667777888999999999999999999999999999999988876  444

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.98  E-value=4.7e-06  Score=45.64  Aligned_cols=30  Identities=23%  Similarity=0.545  Sum_probs=27.4

Q ss_pred             CceeeCC--CCCccccCchhhhhhhhhccCcc
Q 035649           21 PRVFPCL--FCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        21 ~KPfkC~--~CgksFsssqsL~~HqriHtgER   50 (163)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789999  89999999999999999998864

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.97  E-value=3.6e-06  Score=44.72  Aligned_cols=30  Identities=17%  Similarity=0.464  Sum_probs=27.1

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhccCccc
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHKKERT   51 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHtgERp   51 (163)
                      ++|+|.+|++.|.....|..|+++|.++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            479999999999999999999999987753

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=97.97  E-value=2.9e-06  Score=54.55  Aligned_cols=40  Identities=20%  Similarity=0.221  Sum_probs=35.6

Q ss_pred             cccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           11 SAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        11 ~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |..|.++|++++||+|.+|++.|.....|.   ++|+++++|.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~   41 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFR   41 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEB
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEE
Confidence            567899999999999999999999888776   7899998875

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=97.97  E-value=4.4e-07  Score=63.43  Aligned_cols=48  Identities=25%  Similarity=0.413  Sum_probs=24.6

Q ss_pred             CCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649            5 HHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus         5 ~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      |.....|..|.++|+++++|.|.+|++.|.....|..|+++|.++++|
T Consensus        48 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   95 (119)
T 2jp9_A           48 FSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPF   95 (119)
T ss_dssp             ESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCE
T ss_pred             cCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCe
Confidence            334444455555555555555555555555555555555555554443

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=6.7e-07  Score=57.65  Aligned_cols=46  Identities=11%  Similarity=0.116  Sum_probs=31.7

Q ss_pred             CCCCCCcccccCCCCCCCCceeeCC-CCCccccCchhhhhhhhhccCcc
Q 035649            3 DDHHRGKVSAEANVDDSSPRVFPCL-FCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus         3 ~~~~~~~~~~~h~~~HTg~KPfkC~-~CgksFsssqsL~~HqriHtgER   50 (163)
                      +.|. ...|..|.++ ++++||+|. +|++.|.....|..|+++|-.++
T Consensus        18 k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A           18 KEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            3444 4556677766 777777777 77777777777777777765544

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=97.96  E-value=6.9e-07  Score=60.76  Aligned_cols=52  Identities=13%  Similarity=0.202  Sum_probs=43.6

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC--CCCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL--FCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~--~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|.....|..|.+.|+++++|.|.  .|++.|.....|..|++.|.++++|.
T Consensus        24 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   77 (100)
T 2ebt_A           24 TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQ   77 (100)
T ss_dssp             CCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCB
T ss_pred             CCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeE
Confidence            45566677788898889999999996  59999999999999999998888765

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.96  E-value=5.1e-06  Score=53.62  Aligned_cols=38  Identities=29%  Similarity=0.263  Sum_probs=34.7

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .+|+++++|+|.+|++.|.....|..|+++|.++++|.
T Consensus         2 ss~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   39 (70)
T 1x5w_A            2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFK   39 (70)
T ss_dssp             CSCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEE
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEe
Confidence            35788999999999999999999999999999988764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=97.96  E-value=9.7e-07  Score=56.20  Aligned_cols=38  Identities=16%  Similarity=0.378  Sum_probs=25.6

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhhh-c-cCccchH
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQNA-H-KKERTAA   53 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~Hqri-H-tgERp~a   53 (163)
                      ++|+++++|.|..|++.|.....|..|++. | .++++|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~   42 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYP   42 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEE
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeE
Confidence            456667777777777777777777777766 5 4566553

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=97.96  E-value=4.9e-07  Score=59.22  Aligned_cols=47  Identities=19%  Similarity=0.347  Sum_probs=41.0

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKK   48 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtg   48 (163)
                      |..+.....|..|.+.|+++++|.|.+|++.|.....|..|+++|++
T Consensus        36 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           36 GKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             ChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            34566677788999999999999999999999999999999999864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.95  E-value=7.9e-07  Score=61.91  Aligned_cols=46  Identities=20%  Similarity=0.291  Sum_probs=22.1

Q ss_pred             CCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccc
Q 035649            6 HRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERT   51 (163)
Q Consensus         6 ~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp   51 (163)
                      .....|..|.+.|.++++|+|.+|++.|.....|..|+++|.++++
T Consensus        20 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   65 (110)
T 2csh_A           20 THKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP   65 (110)
T ss_dssp             SSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCC
T ss_pred             CCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            3334444444444444455555555555555555555544444443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.94  E-value=5.7e-06  Score=57.88  Aligned_cols=44  Identities=20%  Similarity=0.258  Sum_probs=39.0

Q ss_pred             CcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhh--ccCccc
Q 035649            8 GKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNA--HKKERT   51 (163)
Q Consensus         8 ~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~Hqri--HtgERp   51 (163)
                      ++.|..|.++|+++++|+|.+|++.|.....|..|++.  |..+++
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~   49 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDN   49 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCC
Confidence            46789999999999999999999999999999999998  655544

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.94  E-value=1.8e-06  Score=60.01  Aligned_cols=51  Identities=14%  Similarity=0.124  Sum_probs=46.3

Q ss_pred             CCCCC-CCcccccCCCCCCC-CceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649            2 GDDHH-RGKVSAEANVDDSS-PRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus         2 g~~~~-~~~~~~~h~~~HTg-~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      |+.|. ....|..|.++|++ +++|+|.+|++.|.....|..|++.|.++++.
T Consensus        31 ~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           31 NVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            55677 78889999999998 99999999999999999999999999998765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.17  E-value=1.2e-06  Score=46.88  Aligned_cols=30  Identities=30%  Similarity=0.648  Sum_probs=27.1

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      ++||+|.+|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            368999999999999999999999998764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.17  E-value=1.3e-06  Score=46.85  Aligned_cols=29  Identities=24%  Similarity=0.605  Sum_probs=26.5

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      +||+|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            58999999999999999999999998764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.91  E-value=5e-06  Score=45.33  Aligned_cols=29  Identities=34%  Similarity=0.802  Sum_probs=26.6

Q ss_pred             ceeeCC--CCCccccCchhhhhhhhhccCcc
Q 035649           22 RVFPCL--FCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        22 KPfkC~--~CgksFsssqsL~~HqriHtgER   50 (163)
                      +||+|.  .|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999998874

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.91  E-value=5.7e-07  Score=59.25  Aligned_cols=30  Identities=23%  Similarity=0.373  Sum_probs=14.6

Q ss_pred             CCCCceeeCCCCCccccCchhhhhhhhhcc
Q 035649           18 DSSPRVFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        18 HTg~KPfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      |+++++|+|.+|++.|.....|..|+++|.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~   31 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHA   31 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhh
Confidence            344444555555555554444555544444

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.90  E-value=5.5e-06  Score=44.35  Aligned_cols=29  Identities=28%  Similarity=0.567  Sum_probs=26.3

Q ss_pred             ceeeCCCCCccccCchhhhhh-hhhccCcc
Q 035649           22 RVFPCLFCSRKFYSSQALGGH-QNAHKKER   50 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~H-qriHtgER   50 (163)
                      +||.|..|++.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            479999999999999999999 78998764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.90  E-value=5.7e-06  Score=43.70  Aligned_cols=27  Identities=22%  Similarity=0.517  Sum_probs=24.8

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhcc
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      ++||+|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478999999999999999999998874

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.90  E-value=5.5e-06  Score=43.89  Aligned_cols=28  Identities=21%  Similarity=0.566  Sum_probs=25.4

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhccC
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHKK   48 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHtg   48 (163)
                      +++|+|.+|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999998864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=97.89  E-value=2.2e-06  Score=57.05  Aligned_cols=52  Identities=19%  Similarity=0.268  Sum_probs=45.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC--CCCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL--FCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~--~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|.....|..|.+.|+++++|.|.  .|++.|.....|..|++.|.++++|.
T Consensus        14 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   67 (89)
T 2wbs_A           14 GKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ   67 (89)
T ss_dssp             CCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEE
T ss_pred             CCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCcc
Confidence            45667777889999999999999997  59999999999999999999988764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.89  E-value=1.7e-06  Score=57.24  Aligned_cols=52  Identities=12%  Similarity=0.236  Sum_probs=42.6

Q ss_pred             CCCCCCCcccccCCCCCCCC----ceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANVDDSSP----RVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~----KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|.....|..|.+.+...    ++|+|.+|++.|.....|..|+++|.+++++.
T Consensus        22 ~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   77 (86)
T 1x6h_A           22 DKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE   77 (86)
T ss_dssp             SCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCC
T ss_pred             CCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcc
Confidence            34566667788887665544    79999999999999999999999999887664

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.86  E-value=7e-06  Score=42.98  Aligned_cols=27  Identities=37%  Similarity=0.767  Sum_probs=23.8

Q ss_pred             eeeCCCCCccccCchhhhhhhhhccCc
Q 035649           23 VFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      ||+|.+|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999999764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=97.85  E-value=4e-06  Score=53.28  Aligned_cols=47  Identities=19%  Similarity=0.347  Sum_probs=40.7

Q ss_pred             CCCCCCCcccccCCCC-C-CCCceeeCCCCCccccCchhhhhhhhhccC
Q 035649            2 GDDHHRGKVSAEANVD-D-SSPRVFPCLFCSRKFYSSQALGGHQNAHKK   48 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~-H-Tg~KPfkC~~CgksFsssqsL~~HqriHtg   48 (163)
                      |+.|.....|..|.++ | +++++|+|.+|++.|.....|..|++.|.+
T Consensus        17 ~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           17 SRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4556777788999887 7 689999999999999999999999988754

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.84  E-value=5.1e-06  Score=54.56  Aligned_cols=51  Identities=20%  Similarity=0.378  Sum_probs=43.1

Q ss_pred             CCCCCCCcccccCCCCCCC---CceeeCCCCCccccCchhhhhhh-hhccCccch
Q 035649            2 GDDHHRGKVSAEANVDDSS---PRVFPCLFCSRKFYSSQALGGHQ-NAHKKERTA   52 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg---~KPfkC~~CgksFsssqsL~~Hq-riHtgERp~   52 (163)
                      |+.|.....|..|.++|++   +++|.|.+|++.|.....|..|+ ..|.++++.
T Consensus        14 ~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A           14 GFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            4566777888999999985   89999999999999999999999 667766544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=97.84  E-value=1.2e-06  Score=56.82  Aligned_cols=43  Identities=23%  Similarity=0.498  Sum_probs=36.6

Q ss_pred             ccCCCCCCCCceeeCCC--CCccccCchhhhhhhhhccCccchHH
Q 035649           12 AEANVDDSSPRVFPCLF--CSRKFYSSQALGGHQNAHKKERTAAR   54 (163)
Q Consensus        12 ~~h~~~HTg~KPfkC~~--CgksFsssqsL~~HqriHtgERp~a~   54 (163)
                      ...+...+..++|.|..  |++.|.....|..|+++|.++++|..
T Consensus         6 ~~~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C   50 (72)
T 2epa_A            6 SGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSC   50 (72)
T ss_dssp             CCCCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEEC
T ss_pred             CCCCCCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccC
Confidence            45566677889999988  99999999999999999999988763

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.82  E-value=5.9e-06  Score=43.96  Aligned_cols=27  Identities=19%  Similarity=0.423  Sum_probs=24.6

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhcc
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      ++||+|.+|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            478999999999999999999998874

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=97.81  E-value=3.9e-06  Score=59.19  Aligned_cols=48  Identities=19%  Similarity=0.380  Sum_probs=25.4

Q ss_pred             CCCCcccccCCCCCCCCceeeCCC--CCccccCchhhhhhhhhccCccch
Q 035649            5 HHRGKVSAEANVDDSSPRVFPCLF--CSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus         5 ~~~~~~~~~h~~~HTg~KPfkC~~--CgksFsssqsL~~HqriHtgERp~   52 (163)
                      |.....|..|.++|+++++|.|.+  |++.|.....|..|+++|.++++|
T Consensus        44 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   93 (124)
T 1ubd_C           44 FVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY   93 (124)
T ss_dssp             ESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCC
T ss_pred             hCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCce
Confidence            344444555555555555555543  555555555555555555554443

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=97.80  E-value=1.6e-06  Score=57.75  Aligned_cols=46  Identities=26%  Similarity=0.356  Sum_probs=40.2

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhcc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      |..+.....|..|.+.|+++++|.|.+|++.|.....|..|+++|.
T Consensus        44 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           44 GWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             CCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             CCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            3455666778899999999999999999999999999999999873

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.80  E-value=1.4e-05  Score=52.35  Aligned_cols=42  Identities=21%  Similarity=0.431  Sum_probs=37.0

Q ss_pred             ccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           12 AEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        12 ~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ..+...+.++++|+|.+|++.|.....|..|+++|.++++|.
T Consensus         7 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   48 (77)
T 2cot_A            7 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYK   48 (77)
T ss_dssp             CCCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEE
T ss_pred             CCCcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCee
Confidence            455666788999999999999999999999999999988764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=97.79  E-value=7e-06  Score=50.53  Aligned_cols=34  Identities=24%  Similarity=0.394  Sum_probs=28.4

Q ss_pred             CCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           20 SPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        20 g~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ++++|+|.+|++.|.....|..|+++|.++++|.
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   34 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYK   34 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEE
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcC
Confidence            4689999999999999999999999999988864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.77  E-value=5.8e-06  Score=57.41  Aligned_cols=48  Identities=13%  Similarity=0.269  Sum_probs=42.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      |..|.....|..|.++|+++++|+|.+|++.|.....|..|++.|...
T Consensus        44 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           44 GKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             SCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence            455677788999999999999999999999999999999999988654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=97.73  E-value=2e-06  Score=60.77  Aligned_cols=51  Identities=22%  Similarity=0.270  Sum_probs=40.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC--CCCccccCchhhhhhhhhccCccch
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL--FCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~--~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      |+.|.....|..|.++|+++++|.|.  .|++.|.....|..|+++|++++++
T Consensus        71 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           71 GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             CCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             cCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            34566677788999999999999996  5999999999999999999998764

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.73  E-value=3.3e-06  Score=59.13  Aligned_cols=52  Identities=25%  Similarity=0.321  Sum_probs=40.3

Q ss_pred             CCCCCCCcccccCCC---CCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANV---DDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~---~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|.....|..|..   .+.++++|.|.+|++.|.....|..|+++|.++++|.
T Consensus        42 ~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   96 (124)
T 2dlq_A           42 GKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYK   96 (124)
T ss_dssp             CCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEE
T ss_pred             CchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcc
Confidence            345566667777776   3567788888888888888888888888888887765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=97.73  E-value=1.6e-05  Score=51.75  Aligned_cols=40  Identities=20%  Similarity=0.343  Sum_probs=34.1

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      -...++++++|+|..|++.|.....|..|+++|.++++|.
T Consensus         8 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~   47 (74)
T 2lce_A            8 HSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYR   47 (74)
T ss_dssp             ---CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEE
T ss_pred             cccccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEE
Confidence            3445678899999999999999999999999999988765

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=97.72  E-value=3.4e-06  Score=57.25  Aligned_cols=33  Identities=24%  Similarity=0.533  Sum_probs=20.1

Q ss_pred             CceeeCCC--CCccccCchhhhhhhhhccCccchH
Q 035649           21 PRVFPCLF--CSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        21 ~KPfkC~~--CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .++|.|.+  |++.|.....|..|++.|.+++++.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   47 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYK   47 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEE
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCee
Confidence            45566664  6666666666666666666555543

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.71  E-value=8e-06  Score=57.14  Aligned_cols=52  Identities=13%  Similarity=0.268  Sum_probs=40.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhh---ccCccchH
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNA---HKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~Hqri---HtgERp~a   53 (163)
                      |+.|.....|..|.++|.++++|.|.+|++.|.....|..|+..   +.+++++.
T Consensus        14 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   68 (124)
T 2dlq_A           14 HKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT   68 (124)
T ss_dssp             CCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEE
T ss_pred             CCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeE
Confidence            45566777788888888888899999999999999999999874   45555543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.70  E-value=6.6e-06  Score=60.01  Aligned_cols=51  Identities=14%  Similarity=0.262  Sum_probs=29.5

Q ss_pred             CCCCCCcccccCCCCCCCCceeeCCC--CCccccCchhhhhhhhhccCccchH
Q 035649            3 DDHHRGKVSAEANVDDSSPRVFPCLF--CSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         3 ~~~~~~~~~~~h~~~HTg~KPfkC~~--CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      +.|.....|..|.++|+++++|.|.+  |++.|.....|..|++.|.++++|.
T Consensus        47 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   99 (155)
T 2gli_A           47 RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYM   99 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEE
T ss_pred             hhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCee
Confidence            34445555556666666666666653  6666666666666666666555543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.69  E-value=3.4e-06  Score=59.23  Aligned_cols=47  Identities=13%  Similarity=0.161  Sum_probs=42.2

Q ss_pred             CCCC-CCCcccccCCCCCCCCceeeCCCCCccccCchhhhhh-hhhccCc
Q 035649            2 GDDH-HRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGH-QNAHKKE   49 (163)
Q Consensus         2 g~~~-~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~H-qriHtgE   49 (163)
                      |+.| .....|..|.++| ++++|.|.+|++.|.....|..| +++|+++
T Consensus        41 ~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           41 QAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            5567 6778899999999 99999999999999999999999 9999764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=97.69  E-value=2.7e-06  Score=57.34  Aligned_cols=47  Identities=19%  Similarity=0.319  Sum_probs=41.2

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKK   48 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtg   48 (163)
                      |+.|.....|..|.++|+++++|.|.+|++.|.....|..|++.|.+
T Consensus        10 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C           10 MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            45566777889999999999999999999999999999999988874

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=97.68  E-value=2.8e-06  Score=64.53  Aligned_cols=45  Identities=18%  Similarity=0.310  Sum_probs=22.3

Q ss_pred             CcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649            8 GKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus         8 ~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      ...|..|.++|+++++|+|.+|++.|.....|..|+++|.++++|
T Consensus       118 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  162 (190)
T 2i13_A          118 LAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPY  162 (190)
T ss_dssp             HHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCE
T ss_pred             HHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCe
Confidence            334444444455555555555555555555555555555444443

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=97.67  E-value=4.8e-06  Score=61.07  Aligned_cols=52  Identities=12%  Similarity=0.019  Sum_probs=37.2

Q ss_pred             CCCCCCCcccccCCCC-CCCCce--------eeCCCCCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANVD-DSSPRV--------FPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~-HTg~KP--------fkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|.....|..|.+. |.+.++        |.|..|++.|.....|..|++.|.++++|.
T Consensus        32 ~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   92 (155)
T 2rpc_A           32 DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFP   92 (155)
T ss_dssp             CCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEE
T ss_pred             CcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCccc
Confidence            4556666677777765 665543        678888888888888888888887777665

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.82  E-value=6.7e-06  Score=43.04  Aligned_cols=26  Identities=27%  Similarity=0.645  Sum_probs=23.8

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhcc
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      +||+|.+|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999998773

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=97.64  E-value=3e-06  Score=55.59  Aligned_cols=47  Identities=15%  Similarity=0.363  Sum_probs=41.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC--CCccccCchhhhhhhhhccC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF--CSRKFYSSQALGGHQNAHKK   48 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~--CgksFsssqsL~~HqriHtg   48 (163)
                      |+.+.....|..|.++|+++++|+|.+  |++.|.....|..|+++|.+
T Consensus        10 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A           10 GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            455667778899999999999999988  99999999999999999876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=97.63  E-value=7e-06  Score=58.69  Aligned_cols=33  Identities=30%  Similarity=0.406  Sum_probs=19.8

Q ss_pred             CCCCceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649           18 DSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus        18 HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      |++++||.|.+|++.|.....|..|+++|  +++|
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~  101 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTK  101 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCC
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCC
Confidence            45556666666666666666666666665  4444

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.63  E-value=5.6e-06  Score=55.78  Aligned_cols=48  Identities=19%  Similarity=0.342  Sum_probs=41.0

Q ss_pred             CCCCCCCcccccCCCCCCCC--ceeeCCCCCccccCchhhhhhhh-hccCc
Q 035649            2 GDDHHRGKVSAEANVDDSSP--RVFPCLFCSRKFYSSQALGGHQN-AHKKE   49 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~--KPfkC~~CgksFsssqsL~~Hqr-iHtgE   49 (163)
                      |..|.....|..|.+.|+++  ++|+|.+|++.|.....|..|++ +|.++
T Consensus        42 ~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           42 GLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             CCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             CCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            34566677788999999887  99999999999999999999985 78765

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.61  E-value=2.6e-05  Score=49.70  Aligned_cols=34  Identities=18%  Similarity=0.187  Sum_probs=29.2

Q ss_pred             CcccccCCCCCCCCceeeCCCCCccccCchhhhh
Q 035649            8 GKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGG   41 (163)
Q Consensus         8 ~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~   41 (163)
                      ...|..|.++|+++++|.|.+|++.|.....|..
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~   36 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR   36 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc
Confidence            4568899999999999999999999988777665

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.60  E-value=9.2e-06  Score=53.31  Aligned_cols=46  Identities=13%  Similarity=0.214  Sum_probs=38.6

Q ss_pred             CCCCCCCcccccCCC-CCCCC-ceeeCCCCCccccCchhhhhhhhhcc
Q 035649            2 GDDHHRGKVSAEANV-DDSSP-RVFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus         2 g~~~~~~~~~~~h~~-~HTg~-KPfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      |+.|.....|..|.+ .|+++ ++|+|.+|++.|.....|..|++.+.
T Consensus        22 ~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A           22 HARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhC
Confidence            455667778889986 68875 89999999999999999999998754

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=97.58  E-value=1.8e-05  Score=59.95  Aligned_cols=51  Identities=22%  Similarity=0.397  Sum_probs=34.9

Q ss_pred             CCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649            3 DDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         3 ~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      +.|.....|..|.+.|+++++|+|..|++.|.....|..|++.|.+++++.
T Consensus        29 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   79 (190)
T 2i13_A           29 KSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYK   79 (190)
T ss_dssp             --CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEE
T ss_pred             cccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCcc
Confidence            445666677778888887888888888888888888888887777766553

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=97.58  E-value=5.6e-06  Score=57.69  Aligned_cols=52  Identities=17%  Similarity=0.259  Sum_probs=45.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC--CCCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL--FCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~--~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|.....|..|.+.|+++++|.|.  .|++.|.....|..|++.|.+++++.
T Consensus        15 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   68 (119)
T 2jp9_A           15 NKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQ   68 (119)
T ss_dssp             CCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEE
T ss_pred             cchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCcc
Confidence            45667777888999999999999999  79999999999999999998887764

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=97.55  E-value=3.2e-05  Score=48.03  Aligned_cols=32  Identities=31%  Similarity=0.622  Sum_probs=29.5

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      +||+|.+|++.|.....|..|+++|.++++|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   32 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYP   32 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEE
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCcc
Confidence            58999999999999999999999999988764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.53  E-value=4.1e-05  Score=45.61  Aligned_cols=26  Identities=38%  Similarity=0.581  Sum_probs=24.7

Q ss_pred             CCCCceeeCCCCCccccCchhhhhhh
Q 035649           18 DSSPRVFPCLFCSRKFYSSQALGGHQ   43 (163)
Q Consensus        18 HTg~KPfkC~~CgksFsssqsL~~Hq   43 (163)
                      +++++||+|.+|++.|.....|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            57899999999999999999999998

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=97.52  E-value=7.4e-05  Score=48.14  Aligned_cols=45  Identities=22%  Similarity=0.511  Sum_probs=39.3

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC--CCccccCchhhhhhhhhc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF--CSRKFYSSQALGGHQNAH   46 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~--CgksFsssqsL~~HqriH   46 (163)
                      |+.|.....|..|.++|+++++|+|.+  |++.|.....|..|+++|
T Consensus        26 ~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           26 GKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            455667778899999999999999975  999999999999998765

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.48  E-value=1.3e-05  Score=58.41  Aligned_cols=52  Identities=15%  Similarity=0.175  Sum_probs=31.1

Q ss_pred             CCCCCCCcccccCCC---CCCCCceeeCCCC-----CccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANV---DDSSPRVFPCLFC-----SRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~---~HTg~KPfkC~~C-----gksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|.....|..|.+   .|+++++|.|.+|     ++.|.....|..|++.|.+++++.
T Consensus        10 ~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~   69 (155)
T 2gli_A           10 SQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHK   69 (155)
T ss_dssp             CCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCC
T ss_pred             ccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCcc
Confidence            344555556666655   5666666666532     366666666666666666665554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.48  E-value=5.1e-05  Score=39.91  Aligned_cols=27  Identities=30%  Similarity=0.631  Sum_probs=24.6

Q ss_pred             ceeeCC--CCCccccCchhhhhhhhhccC
Q 035649           22 RVFPCL--FCSRKFYSSQALGGHQNAHKK   48 (163)
Q Consensus        22 KPfkC~--~CgksFsssqsL~~HqriHtg   48 (163)
                      ++|+|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            479999  999999999999999998863

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=97.40  E-value=8.4e-05  Score=47.87  Aligned_cols=46  Identities=22%  Similarity=0.351  Sum_probs=41.1

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhcc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      |+.|.....|..|.++|+++++|.|.+|++.|.....|..|+++|+
T Consensus        28 ~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           28 DRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            4556777788999999999999999999999999999999998874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=97.38  E-value=2.2e-05  Score=59.52  Aligned_cols=50  Identities=16%  Similarity=0.145  Sum_probs=30.4

Q ss_pred             CCCCCcccccCC-CCC-CCCceeeC--CCCCccccCchhhhhhhhhccCccchH
Q 035649            4 DHHRGKVSAEAN-VDD-SSPRVFPC--LFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         4 ~~~~~~~~~~h~-~~H-Tg~KPfkC--~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      .|.....|..|. +.| .+.++|.|  ..|++.|.....|..|+++|.++++|.
T Consensus        83 ~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~  136 (190)
T 1tf6_A           83 RFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYE  136 (190)
T ss_dssp             EESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSB
T ss_pred             ccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCcc
Confidence            344455556665 555 34566666  666666666666666666666666654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=97.36  E-value=1.6e-05  Score=60.28  Aligned_cols=52  Identities=21%  Similarity=0.340  Sum_probs=36.2

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeC--CCCCccccCchhhhhhhhhccCccchH
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPC--LFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC--~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |+.|.....|..|.++|+++++|.|  ..|++.|.....|..|+++|.+++++.
T Consensus        21 ~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   74 (190)
T 1tf6_A           21 GAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFT   74 (190)
T ss_dssp             CCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEE
T ss_pred             cchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCcee
Confidence            3445555666777777777777777  667777777777777777777766654

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=97.35  E-value=8.1e-05  Score=45.57  Aligned_cols=31  Identities=19%  Similarity=0.317  Sum_probs=28.7

Q ss_pred             eeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           23 VFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ||+|.+|++.|.....|..|+++|.++++|.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   31 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYH   31 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEE
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCcc
Confidence            6899999999999999999999999988764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=97.28  E-value=9.6e-05  Score=49.50  Aligned_cols=33  Identities=33%  Similarity=0.573  Sum_probs=30.4

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ++||.|.+|++.|.....|..|+++|.++++|.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   33 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA   33 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEE
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCcc
Confidence            479999999999999999999999999988764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.23  E-value=0.00022  Score=49.20  Aligned_cols=37  Identities=19%  Similarity=0.373  Sum_probs=28.6

Q ss_pred             ccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhc
Q 035649           10 VSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAH   46 (163)
Q Consensus        10 ~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriH   46 (163)
                      +...+.++|+++++|+|.+|++.|.....|..|++.|
T Consensus         3 s~ss~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   39 (107)
T 1wjp_A            3 SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC   39 (107)
T ss_dssp             CCCCCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             CccccCcccCCCcCeECCCCCCccCCHHHHHHHHHHC
Confidence            3455667778888888888888888888888888776

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.12  E-value=0.00027  Score=50.70  Aligned_cols=38  Identities=11%  Similarity=0.210  Sum_probs=32.2

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhh-hc---cCccchH
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQN-AH---KKERTAA   53 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~Hqr-iH---tgERp~a   53 (163)
                      ..-++++||.|.+|++.|.....|..|++ +|   .++++|.
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~   52 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYV   52 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEE
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcC
Confidence            34478899999999999999999999997 58   5677765

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.12  E-value=5.7e-05  Score=46.72  Aligned_cols=34  Identities=18%  Similarity=0.062  Sum_probs=29.6

Q ss_pred             CCCCCCCcccccCCC-CCCCCceeeCCCCCccccC
Q 035649            2 GDDHHRGKVSAEANV-DDSSPRVFPCLFCSRKFYS   35 (163)
Q Consensus         2 g~~~~~~~~~~~h~~-~HTg~KPfkC~~CgksFss   35 (163)
                      |+.|.....|..|.+ +|+++++|+|.+|++.|.+
T Consensus        19 ~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           19 GKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            456677788999986 9999999999999999975

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.05  E-value=0.00025  Score=47.59  Aligned_cols=44  Identities=18%  Similarity=0.212  Sum_probs=38.2

Q ss_pred             CcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649            8 GKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus         8 ~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ...|..|++++.+.+++.|.+|++.|. ...|..|+ .|.+++++.
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~   45 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTEL   45 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEE
T ss_pred             chHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceE
Confidence            456889999999999999999999995 88899999 788887754

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.03  E-value=0.00034  Score=44.59  Aligned_cols=34  Identities=26%  Similarity=0.547  Sum_probs=30.7

Q ss_pred             CCCCceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           18 DSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        18 HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ..+++||+|.+|++.|. ...|..|+++ .++++|.
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~   38 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVA   38 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEE
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCcc
Confidence            46789999999999999 9999999998 8888875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=96.79  E-value=0.00019  Score=51.12  Aligned_cols=46  Identities=11%  Similarity=0.050  Sum_probs=40.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      |+.|.....|..|.++|  ++||+|.+|++.|.....|..|++.|++.
T Consensus        81 ~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           81 LMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            45667777889999998  88999999999999999999999998765

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.71  E-value=0.00016  Score=43.41  Aligned_cols=30  Identities=10%  Similarity=-0.014  Sum_probs=26.0

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSR   31 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~Cgk   31 (163)
                      |+.|.....|..|.++|++++||+|.+|++
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           19 GKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             TEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            445677788999999999999999999985

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.66  E-value=0.0011  Score=42.84  Aligned_cols=35  Identities=31%  Similarity=0.613  Sum_probs=31.2

Q ss_pred             CCCceeeCCC--CCccccCchhhhhhhh-hccCccchH
Q 035649           19 SSPRVFPCLF--CSRKFYSSQALGGHQN-AHKKERTAA   53 (163)
Q Consensus        19 Tg~KPfkC~~--CgksFsssqsL~~Hqr-iHtgERp~a   53 (163)
                      +++++|.|..  |++.|.....|..|++ .|.++++|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~   40 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFS   40 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEE
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeE
Confidence            5678999997  9999999999999999 798888764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=96.33  E-value=0.0014  Score=42.46  Aligned_cols=31  Identities=23%  Similarity=0.445  Sum_probs=28.4

Q ss_pred             eeeC--CCCCccccCchhhhhhhhhccCccchH
Q 035649           23 VFPC--LFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        23 PfkC--~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      ||+|  ..|++.|.....|..|+++|.+++++.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   33 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYE   33 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEE
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCee
Confidence            6899  999999999999999999999888764

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.02  E-value=0.0011  Score=38.82  Aligned_cols=28  Identities=4%  Similarity=-0.153  Sum_probs=25.3

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A           19 GKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5667888899999999999999999988

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.97  E-value=0.0011  Score=38.95  Aligned_cols=28  Identities=7%  Similarity=-0.173  Sum_probs=25.3

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A           19 GKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            5677888889999999999999999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.93  E-value=0.0012  Score=38.59  Aligned_cols=28  Identities=7%  Similarity=-0.135  Sum_probs=25.3

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A           19 GKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5677888889999999999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.92  E-value=0.0011  Score=38.81  Aligned_cols=28  Identities=4%  Similarity=-0.226  Sum_probs=25.2

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|+++++|+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A           19 GKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5677888889999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.91  E-value=0.0011  Score=38.96  Aligned_cols=28  Identities=7%  Similarity=-0.204  Sum_probs=25.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A           19 GKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             ChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5678888899999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.82  E-value=0.001  Score=39.12  Aligned_cols=28  Identities=7%  Similarity=-0.194  Sum_probs=25.3

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A           19 GKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5677888889999999999999999988

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.75  E-value=0.0014  Score=38.26  Aligned_cols=28  Identities=4%  Similarity=-0.255  Sum_probs=25.1

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A           19 GKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5677888889999999999999999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.75  E-value=0.0011  Score=38.80  Aligned_cols=28  Identities=4%  Similarity=-0.158  Sum_probs=24.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A           19 GKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            5667788889999999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.69  E-value=0.0012  Score=38.67  Aligned_cols=28  Identities=11%  Similarity=-0.059  Sum_probs=24.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A           19 GKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5667778889999999999999999988

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=95.68  E-value=0.0012  Score=38.65  Aligned_cols=28  Identities=0%  Similarity=-0.275  Sum_probs=24.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|..|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A           19 AKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             SCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4567778889999999999999999988

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=95.67  E-value=0.0014  Score=38.45  Aligned_cols=28  Identities=0%  Similarity=-0.356  Sum_probs=25.1

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A           19 DMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            5677888889999999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.65  E-value=0.0012  Score=38.82  Aligned_cols=28  Identities=4%  Similarity=-0.205  Sum_probs=24.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A           19 GRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5667788889999999999999999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.65  E-value=0.0013  Score=38.68  Aligned_cols=28  Identities=7%  Similarity=-0.118  Sum_probs=25.0

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|..|
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A           19 GKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5667788889999999999999999987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.64  E-value=0.0013  Score=38.70  Aligned_cols=28  Identities=11%  Similarity=-0.121  Sum_probs=24.6

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        21 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A           21 GWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4567777889999999999999999988

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.62  E-value=0.0013  Score=38.62  Aligned_cols=28  Identities=4%  Similarity=-0.199  Sum_probs=24.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           19 HKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4567778889999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.58  E-value=0.0012  Score=38.77  Aligned_cols=28  Identities=4%  Similarity=-0.181  Sum_probs=24.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A           19 GKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             cchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4567778889999999999999999988

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.55  E-value=0.00072  Score=45.24  Aligned_cols=40  Identities=23%  Similarity=0.238  Sum_probs=34.3

Q ss_pred             CcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCc
Q 035649            8 GKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus         8 ~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      ...|..|. .+.+++|+.|..|++.|. ...|..|+.+|+++
T Consensus        29 ~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A           29 ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            44567888 789999999999999887 58899999999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=95.55  E-value=0.0012  Score=38.87  Aligned_cols=28  Identities=7%  Similarity=-0.122  Sum_probs=25.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A           19 GKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5678888999999999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.51  E-value=0.0015  Score=38.20  Aligned_cols=28  Identities=4%  Similarity=-0.251  Sum_probs=24.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|..|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A           19 GKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4567777889999999999999999988

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=95.50  E-value=0.0011  Score=38.96  Aligned_cols=28  Identities=0%  Similarity=-0.340  Sum_probs=24.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A           19 EKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4567778889999999999999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=95.47  E-value=0.0014  Score=38.33  Aligned_cols=28  Identities=7%  Similarity=-0.128  Sum_probs=24.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A           19 GKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             ccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4567778889999999999999999988

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.44  E-value=0.002  Score=37.65  Aligned_cols=28  Identities=4%  Similarity=-0.210  Sum_probs=25.2

Q ss_pred             CCCCCCCcccccCCC-CCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANV-DDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~-~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.+ +|++++||+|.+|
T Consensus        19 ~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A           19 GKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            567788888999999 9999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.43  E-value=0.0012  Score=38.62  Aligned_cols=28  Identities=11%  Similarity=-0.082  Sum_probs=24.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A           19 GKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             TBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            4567788889999999999999999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.39  E-value=0.0013  Score=38.61  Aligned_cols=28  Identities=7%  Similarity=-0.228  Sum_probs=24.3

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A           19 GKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             TEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            4456777889999999999999999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.38  E-value=0.0012  Score=38.68  Aligned_cols=28  Identities=7%  Similarity=-0.162  Sum_probs=24.6

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A           19 GKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             TEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             ChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4567777889999999999999999988

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=95.37  E-value=0.00097  Score=42.38  Aligned_cols=27  Identities=19%  Similarity=0.383  Sum_probs=23.0

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhh
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGH   42 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~H   42 (163)
                      ++|++++||+|.+|++.|.....+..+
T Consensus        32 ~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A           32 LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hhcCCCCCEECCCCCCccccCcccccc
Confidence            678999999999999999987766543

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.35  E-value=0.0014  Score=38.26  Aligned_cols=28  Identities=4%  Similarity=-0.237  Sum_probs=25.2

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|+++++|+|.+|
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A           19 GKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5667888889999999999999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.31  E-value=0.0014  Score=38.42  Aligned_cols=28  Identities=7%  Similarity=-0.155  Sum_probs=24.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A           19 GKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            5567778889999999999999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.31  E-value=0.0016  Score=38.20  Aligned_cols=28  Identities=4%  Similarity=-0.169  Sum_probs=24.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A           19 GKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4567778889999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.29  E-value=0.0012  Score=38.74  Aligned_cols=28  Identities=7%  Similarity=-0.126  Sum_probs=24.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A           19 GKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4567778889999999999999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.26  E-value=0.0016  Score=38.06  Aligned_cols=28  Identities=4%  Similarity=-0.211  Sum_probs=24.6

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|+++++|+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A           19 GKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             ChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4567777889999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.24  E-value=0.0016  Score=38.15  Aligned_cols=28  Identities=4%  Similarity=-0.139  Sum_probs=24.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A           19 GKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5667788889999999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=95.18  E-value=0.0015  Score=38.27  Aligned_cols=28  Identities=7%  Similarity=-0.104  Sum_probs=24.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|..|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A           19 GKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             cchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5567778889999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.18  E-value=0.0015  Score=38.23  Aligned_cols=28  Identities=4%  Similarity=-0.146  Sum_probs=24.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A           19 GKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             TEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4556777889999999999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=95.13  E-value=0.0012  Score=38.81  Aligned_cols=28  Identities=4%  Similarity=-0.150  Sum_probs=25.1

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A           19 GKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5677888889999999999999999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.12  E-value=0.00098  Score=39.03  Aligned_cols=29  Identities=7%  Similarity=-0.177  Sum_probs=25.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCS   30 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~Cg   30 (163)
                      |+.|.....|..|.++|+++++|.|++|+
T Consensus        17 ~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A           17 GLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             TEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            45677778899999999999999999996

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.00  E-value=0.0015  Score=38.12  Aligned_cols=28  Identities=7%  Similarity=-0.207  Sum_probs=25.1

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|+++++|+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A           19 GKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             ChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5677888889999999999999999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.98  E-value=0.0013  Score=38.54  Aligned_cols=28  Identities=7%  Similarity=-0.160  Sum_probs=25.0

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A           19 GKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5667788889999999999999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.96  E-value=0.0012  Score=38.69  Aligned_cols=28  Identities=11%  Similarity=-0.171  Sum_probs=24.6

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A           19 GEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5567777889999999999999999988

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.96  E-value=0.008  Score=37.70  Aligned_cols=33  Identities=15%  Similarity=0.281  Sum_probs=30.8

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      +++|.|.+|++.|.....|..|+++|.++++|.
T Consensus        37 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~   69 (73)
T 2ctu_A           37 RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSG   69 (73)
T ss_dssp             SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSS
T ss_pred             CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCC
Confidence            789999999999999999999999999998874

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.90  E-value=0.0031  Score=36.88  Aligned_cols=28  Identities=4%  Similarity=-0.220  Sum_probs=24.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A           19 GKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5567778889999999999999999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.89  E-value=0.0011  Score=38.46  Aligned_cols=28  Identities=0%  Similarity=-0.262  Sum_probs=24.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|+++++|+|.+|
T Consensus        17 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A           17 EKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5667788889999999999999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.86  E-value=0.0013  Score=38.59  Aligned_cols=28  Identities=18%  Similarity=-0.037  Sum_probs=24.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|..|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A           19 GKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            4567778889999999999999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.82  E-value=0.00097  Score=39.12  Aligned_cols=28  Identities=4%  Similarity=-0.050  Sum_probs=24.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A           19 GKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             TEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            4556777889999999999999999988

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.80  E-value=0.0011  Score=38.92  Aligned_cols=28  Identities=4%  Similarity=-0.126  Sum_probs=25.1

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A           19 GKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5667888889999999999999999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.76  E-value=0.0011  Score=38.70  Aligned_cols=28  Identities=4%  Similarity=-0.164  Sum_probs=24.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A           19 GKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             ChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4567778889999999999999999988

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.73  E-value=0.0011  Score=38.97  Aligned_cols=28  Identities=7%  Similarity=-0.177  Sum_probs=24.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|+++++|+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A           19 GKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4567778889999999999999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.72  E-value=0.0014  Score=38.36  Aligned_cols=28  Identities=7%  Similarity=-0.121  Sum_probs=24.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|..|
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A           19 GKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            5567778889999999999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.72  E-value=0.0012  Score=38.84  Aligned_cols=28  Identities=7%  Similarity=-0.099  Sum_probs=24.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A           19 GKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             TBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5567788889999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.72  E-value=0.002  Score=37.71  Aligned_cols=28  Identities=4%  Similarity=-0.212  Sum_probs=24.6

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A           19 GKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             ChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4567778889999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.69  E-value=0.0014  Score=38.40  Aligned_cols=28  Identities=4%  Similarity=-0.219  Sum_probs=24.6

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|..|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A           19 GKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            5567778889999999999999999987

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.64  E-value=0.0075  Score=45.48  Aligned_cols=43  Identities=23%  Similarity=0.426  Sum_probs=33.3

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccCccchHHhhhhcc
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRVA   60 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a~r~~~~~   60 (163)
                      .--.+++.++|.|..|++.|.+...|..|++.    +.+.+|...+.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs----K~HKrrvk~l~   83 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS----KDHKKRLKQLS   83 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC----HHHHHHHHHHT
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh----hhhhHHHHHhc
Confidence            34567889999999999999999999988764    34555555553

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.59  E-value=0.0012  Score=38.76  Aligned_cols=28  Identities=7%  Similarity=-0.166  Sum_probs=24.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A           19 GKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5667788889999999999999999988

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.54  E-value=0.047  Score=36.08  Aligned_cols=31  Identities=23%  Similarity=0.236  Sum_probs=26.7

Q ss_pred             CceeeCCCCCccccCchhhhhhhhh-ccCccc
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNA-HKKERT   51 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~Hqri-HtgERp   51 (163)
                      ...+.|..|++.|.....|..|++. |.++++
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   54 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPE   54 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTT
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCC
Confidence            3457899999999999999999998 887755

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.44  E-value=0.0013  Score=38.59  Aligned_cols=28  Identities=4%  Similarity=-0.187  Sum_probs=24.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|.+|
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A           19 GKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5667788889999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.11  E-value=0.0016  Score=38.27  Aligned_cols=28  Identities=11%  Similarity=-0.136  Sum_probs=24.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|+++++|+|.+|
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A           19 GKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            5667788889999999999999999988

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.33  E-value=0.004  Score=36.43  Aligned_cols=28  Identities=7%  Similarity=-0.184  Sum_probs=24.0

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFC   29 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~C   29 (163)
                      |+.|.....|..|.++|++++||+|..|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A           19 GKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4567777889999999999999999875

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.21  E-value=0.015  Score=34.02  Aligned_cols=27  Identities=11%  Similarity=-0.084  Sum_probs=23.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|+.
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A           19 GKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            567888889999999999999999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.16  E-value=0.018  Score=33.48  Aligned_cols=27  Identities=4%  Similarity=-0.208  Sum_probs=23.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|..
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A           19 RKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            567888889999999999999999964

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.96  E-value=0.014  Score=33.89  Aligned_cols=27  Identities=7%  Similarity=-0.155  Sum_probs=23.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|.+
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A           19 GKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            567888888999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.96  E-value=0.015  Score=33.78  Aligned_cols=27  Identities=4%  Similarity=-0.183  Sum_probs=23.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||.|.+
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A           19 GKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            567788888999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.88  E-value=0.016  Score=33.65  Aligned_cols=27  Identities=7%  Similarity=-0.215  Sum_probs=23.6

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|..
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A           19 GKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            567788888999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.79  E-value=0.016  Score=33.75  Aligned_cols=27  Identities=4%  Similarity=-0.091  Sum_probs=23.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|+.
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A           19 GKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            566778888999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.74  E-value=0.013  Score=34.15  Aligned_cols=27  Identities=7%  Similarity=-0.132  Sum_probs=23.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|..
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A           19 GKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566778888999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.57  E-value=0.018  Score=33.46  Aligned_cols=27  Identities=7%  Similarity=-0.105  Sum_probs=23.6

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|..
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A           19 GKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            567788888999999999999999964

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.40  E-value=0.015  Score=33.70  Aligned_cols=27  Identities=4%  Similarity=-0.172  Sum_probs=23.3

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|.+
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A           19 GKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             ChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            566777888999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.25  E-value=0.021  Score=33.15  Aligned_cols=27  Identities=7%  Similarity=-0.103  Sum_probs=23.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|..
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A           19 GKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             TCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            567788888999999999999999964

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.16  E-value=0.03  Score=31.61  Aligned_cols=25  Identities=4%  Similarity=-0.170  Sum_probs=22.1

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPC   26 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC   26 (163)
                      |+.|.....|..|.++|++++||+|
T Consensus        18 ~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A           18 GKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             TCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             cchhCCHHHHHHHHHHhCCCCCCCC
Confidence            5667788889999999999999988

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.14  E-value=0.013  Score=33.96  Aligned_cols=27  Identities=7%  Similarity=-0.074  Sum_probs=22.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|+++++|+|.+
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A           19 GKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             TEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            455677788999999999999999964

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.04  E-value=0.022  Score=32.52  Aligned_cols=26  Identities=4%  Similarity=-0.155  Sum_probs=22.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL   27 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~   27 (163)
                      |+.|.....|..|.++|++++||+|+
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A           19 GKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            56778888899999999999999985

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.87  E-value=0.021  Score=33.19  Aligned_cols=27  Identities=4%  Similarity=-0.133  Sum_probs=23.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|..
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A           19 GKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            566778888999999999999999964

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.72  E-value=0.015  Score=33.66  Aligned_cols=27  Identities=0%  Similarity=-0.240  Sum_probs=23.2

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|.+
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A           19 QKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456777888999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.70  E-value=0.02  Score=33.15  Aligned_cols=27  Identities=4%  Similarity=-0.141  Sum_probs=23.0

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|..
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A           19 GKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            456777888999999999999999964

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.69  E-value=0.011  Score=34.23  Aligned_cols=27  Identities=7%  Similarity=-0.084  Sum_probs=23.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|.+
T Consensus        17 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A           17 DCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            566778888999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.47  E-value=0.021  Score=32.31  Aligned_cols=25  Identities=4%  Similarity=-0.105  Sum_probs=21.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPC   26 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC   26 (163)
                      |+.|.....|..|.++|++++||+|
T Consensus        17 ~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A           17 GKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4567778889999999999999998

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.40  E-value=0.021  Score=33.02  Aligned_cols=27  Identities=4%  Similarity=-0.210  Sum_probs=23.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|..
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A           19 GKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566788888999999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.27  E-value=0.018  Score=33.52  Aligned_cols=27  Identities=4%  Similarity=-0.261  Sum_probs=23.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|+++++|+|..
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A           19 RKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            567788888999999999999999964

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.16  E-value=0.029  Score=32.60  Aligned_cols=27  Identities=7%  Similarity=-0.108  Sum_probs=23.3

Q ss_pred             CCCCCCCcccccCCCCCCC-CceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSS-PRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg-~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++ ++||+|.+
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A           19 EKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5667788889999999999 99999964

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.02  E-value=0.014  Score=34.15  Aligned_cols=27  Identities=4%  Similarity=-0.212  Sum_probs=23.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|..
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A           19 GKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            567788888999999999999999964

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.90  E-value=0.02  Score=33.20  Aligned_cols=27  Identities=4%  Similarity=-0.186  Sum_probs=23.1

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|+++++|+|..
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A           19 GKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            456777888999999999999999964

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.89  E-value=0.032  Score=31.63  Aligned_cols=25  Identities=4%  Similarity=-0.155  Sum_probs=22.0

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPC   26 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC   26 (163)
                      |+.|.....|..|.++|++++||+|
T Consensus        18 ~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A           18 GTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCccCCHHHHHHHHHhcCCCCCCCC
Confidence            5667788889999999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.87  E-value=0.026  Score=32.60  Aligned_cols=27  Identities=4%  Similarity=-0.152  Sum_probs=22.9

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|..
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A           19 GKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             TEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456777888999999999999999964

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.83  E-value=0.011  Score=34.40  Aligned_cols=27  Identities=4%  Similarity=-0.151  Sum_probs=23.3

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|.+
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A           19 GKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            566778888999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=90.61  E-value=0.021  Score=32.33  Aligned_cols=26  Identities=8%  Similarity=-0.050  Sum_probs=22.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL   27 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~   27 (163)
                      |+.|.....|..|.++|+++++|+|.
T Consensus        17 ~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A           17 GKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             ChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            45677788899999999999999984

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.24  E-value=0.018  Score=33.56  Aligned_cols=27  Identities=0%  Similarity=-0.231  Sum_probs=23.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|..
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A           19 KKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            566778888999999999999999964

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.11  E-value=0.019  Score=33.13  Aligned_cols=26  Identities=8%  Similarity=-0.079  Sum_probs=22.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL   27 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~   27 (163)
                      |+.|.....|..|.++|++++||+|.
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A           19 GKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            56778888899999999999999984

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.92  E-value=0.029  Score=32.07  Aligned_cols=26  Identities=12%  Similarity=-0.068  Sum_probs=22.2

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL   27 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~   27 (163)
                      |+.|.....|..|.++|+++++|+|.
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A           19 GKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             TEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            45677788899999999999999984

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.85  E-value=0.017  Score=33.53  Aligned_cols=27  Identities=4%  Similarity=-0.137  Sum_probs=23.2

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|+.
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A           19 SKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            556777888999999999999999975

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.84  E-value=0.016  Score=33.55  Aligned_cols=27  Identities=11%  Similarity=-0.079  Sum_probs=23.2

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|.+
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A           19 GKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            556777888999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.81  E-value=0.028  Score=31.72  Aligned_cols=26  Identities=0%  Similarity=-0.199  Sum_probs=22.6

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL   27 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~   27 (163)
                      |+.|.....|..|.++|+++++|+|.
T Consensus        17 ~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A           17 KETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56677888899999999999999984

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=89.58  E-value=0.029  Score=32.18  Aligned_cols=26  Identities=4%  Similarity=-0.181  Sum_probs=22.1

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL   27 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~   27 (163)
                      |+.|.....|..|.++|++++||+|+
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A           19 QATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            45677778899999999999999984

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=89.41  E-value=0.016  Score=33.74  Aligned_cols=27  Identities=7%  Similarity=-0.139  Sum_probs=23.0

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|.+
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A           19 GKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456777788999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.16  E-value=0.013  Score=34.03  Aligned_cols=27  Identities=7%  Similarity=-0.127  Sum_probs=23.0

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|++++||+|.+
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A           19 GKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            456777888999999999999999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.15  E-value=0.025  Score=32.30  Aligned_cols=26  Identities=0%  Similarity=-0.244  Sum_probs=22.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL   27 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~   27 (163)
                      |+.|.....|..|.++|++++||+|+
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A           19 QKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            55677788899999999999999984

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=89.02  E-value=0.025  Score=31.91  Aligned_cols=25  Identities=12%  Similarity=-0.066  Sum_probs=21.7

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPC   26 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC   26 (163)
                      |+.|.....|..|.++|++++||+|
T Consensus        18 ~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A           18 GKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CcccCCHHHHHHHhhhcCCCCCCCC
Confidence            5567778889999999999999998

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.84  E-value=0.035  Score=31.80  Aligned_cols=26  Identities=0%  Similarity=-0.202  Sum_probs=22.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL   27 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~   27 (163)
                      |+.|.....|..|.++|+++++|+|.
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A           19 DRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             SCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            45677888899999999999999984

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=88.61  E-value=0.0053  Score=42.40  Aligned_cols=43  Identities=5%  Similarity=-0.212  Sum_probs=33.2

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhccC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKK   48 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtg   48 (163)
                      |+.|.....|..|.++|++++||+|..|.    ....|..|++.|.+
T Consensus        32 ~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           32 DSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             CCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            45566777889999999999999998765    45556777777765

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.35  E-value=0.039  Score=31.59  Aligned_cols=26  Identities=8%  Similarity=-0.196  Sum_probs=22.0

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL   27 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~   27 (163)
                      |+.|.....|..|.++|++++||+|.
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A           19 GKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             TEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45577788899999999999999984

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.91  E-value=0.025  Score=32.90  Aligned_cols=27  Identities=11%  Similarity=-0.093  Sum_probs=22.8

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|+++++|+|+.
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A           19 GKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            456777888999999999999999963

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.30  E-value=0.024  Score=32.92  Aligned_cols=27  Identities=15%  Similarity=-0.140  Sum_probs=23.1

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|+++++|+|+.
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A           19 GKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566778888999999999999999963

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.63  E-value=0.028  Score=32.63  Aligned_cols=27  Identities=4%  Similarity=-0.220  Sum_probs=22.5

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|.++|+++++|+|..
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A           19 GKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             TEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            455677788999999999999999964

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.45  E-value=0.03  Score=31.68  Aligned_cols=25  Identities=4%  Similarity=-0.163  Sum_probs=21.4

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPC   26 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC   26 (163)
                      |+.|.....|..|.++|++++||+|
T Consensus        18 ~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A           18 GARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             ChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            4567777889999999999999987

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.73  E-value=0.5  Score=30.20  Aligned_cols=24  Identities=29%  Similarity=0.429  Sum_probs=22.1

Q ss_pred             ceeeCCCCCccccCchhhhhhhhh
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNA   45 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~Hqri   45 (163)
                      -.|.|+.|+..|.....|..||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            578999999999999999999974

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=82.42  E-value=0.11  Score=29.67  Aligned_cols=26  Identities=4%  Similarity=-0.177  Sum_probs=22.1

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCL   27 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~   27 (163)
                      |+.|.....|..|.++|++++||.|.
T Consensus        19 ~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A           19 GKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CcccCchHHHHHHHhHhcCCCCCCCC
Confidence            55677888899999999999999873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	163
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	1e-11

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.9 bits (130), Expect = 1e-11
 Identities = 18/34 (52%), Positives = 24/34 (70%)

Query: 21 PRVFPCLFCSRKFYSSQALGGHQNAHKKERTAAR 54
          PR + C FC R+F S+QALGGH N H+++R   R
Sbjct: 3  PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	163
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.07
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.93
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.88
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.83
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.73
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.7
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.66
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.61
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.6
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.59
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.56
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.54
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.43
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.27
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.24
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.2
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.06
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.95
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.93
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.92
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	97.88
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.81
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.56
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.44
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.37
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.12
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.12
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.76
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.58
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.49
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.3
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.99
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.98
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	95.64
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.55
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.36
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.03
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	94.86
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	94.84
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.81
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	94.75
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.53
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.9
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.73
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.69
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	92.72
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.14
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	91.81
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	87.84
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	85.34
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	83.37
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	81.08

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.3e-11  Score=72.57  Aligned_cols=37  Identities=24%  Similarity=0.483  Sum_probs=35.8

Q ss_pred             cCCCCCCCCceeeCCCCCccccCchhhhhhhhhccCc
Q 035649           13 EANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        13 ~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      .|+++|++++||+|.+|++.|.....|..|+++|++|
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999987

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.6e-10  Score=66.91  Aligned_cols=33  Identities=30%  Similarity=0.512  Sum_probs=31.7

Q ss_pred             CCCCCceeeCCCCCccccCchhhhhhhhhccCc
Q 035649           17 DDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        17 ~HTg~KPfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      +||++|||+|.+|++.|.....|..|+++|++|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.88  E-value=5.1e-10  Score=66.87  Aligned_cols=35  Identities=26%  Similarity=0.441  Sum_probs=33.2

Q ss_pred             CCCCCCCCceeeCCCCCccccCchhhhhhhhhccC
Q 035649           14 ANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKK   48 (163)
Q Consensus        14 h~~~HTg~KPfkC~~CgksFsssqsL~~HqriHtg   48 (163)
                      |.|+|+++|||+|.+|++.|.....|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            78999999999999999999999999999999864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=9e-10  Score=65.43  Aligned_cols=34  Identities=18%  Similarity=0.391  Sum_probs=32.2

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhhhccCc
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      |+||+++||+|.+|++.|.....|..|+++|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5899999999999999999999999999999875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.73  E-value=3e-09  Score=63.01  Aligned_cols=33  Identities=24%  Similarity=0.440  Sum_probs=30.9

Q ss_pred             CCCCceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           18 DSSPRVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        18 HTg~KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      ||++|||+|.+|++.|.....|..|+++|+.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            789999999999999999999999999998753

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=5.1e-10  Score=70.59  Aligned_cols=45  Identities=22%  Similarity=0.359  Sum_probs=40.0

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCCCCccccCchhhhhhhhhc
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLFCSRKFYSSQALGGHQNAH   46 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~CgksFsssqsL~~HqriH   46 (163)
                      |+.|.....|..|+++|++++||+|.+|++.|.....|..|+++|
T Consensus         9 gk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           9 GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            567788888999999999999999999999999999999998876

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.66  E-value=4.5e-09  Score=59.75  Aligned_cols=29  Identities=34%  Similarity=0.707  Sum_probs=27.9

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      |||+|.+|++.|.....|..|+++|++||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=8.7e-09  Score=62.27  Aligned_cols=34  Identities=26%  Similarity=0.552  Sum_probs=31.4

Q ss_pred             CCceeeCCCCCccccCchhhhhhhh-hccCccchH
Q 035649           20 SPRVFPCLFCSRKFYSSQALGGHQN-AHKKERTAA   53 (163)
Q Consensus        20 g~KPfkC~~CgksFsssqsL~~Hqr-iHtgERp~a   53 (163)
                      .+|||+|.+|++.|.....|..|++ +|++||||.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~   36 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK   36 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCC
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcC
Confidence            4799999999999999999999975 899999984

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=9.1e-09  Score=58.49  Aligned_cols=29  Identities=28%  Similarity=0.699  Sum_probs=27.8

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhccCcc
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      |||.|.+|++.|..+..|..|+++|++||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1.2e-08  Score=60.48  Aligned_cols=33  Identities=21%  Similarity=0.457  Sum_probs=29.3

Q ss_pred             CCCCCCceeeCCCCCccccCchhhhhhhh-hccC
Q 035649           16 VDDSSPRVFPCLFCSRKFYSSQALGGHQN-AHKK   48 (163)
Q Consensus        16 ~~HTg~KPfkC~~CgksFsssqsL~~Hqr-iHtg   48 (163)
                      ++||++|||+|.+|++.|..+..|..|++ .|+.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            58999999999999999999999999975 4543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.56  E-value=1.3e-08  Score=63.68  Aligned_cols=40  Identities=23%  Similarity=0.545  Sum_probs=35.4

Q ss_pred             ccccCCCCCCCCceeeCCC--CCccccCchhhhhhhhhccCcc
Q 035649           10 VSAEANVDDSSPRVFPCLF--CSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        10 ~~~~h~~~HTg~KPfkC~~--CgksFsssqsL~~HqriHtgER   50 (163)
                      .+..|- .|++++||+|.+  |++.|.....|..|+++|++||
T Consensus         6 ~l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            455555 499999999988  9999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.54  E-value=1.3e-08  Score=57.50  Aligned_cols=28  Identities=32%  Similarity=0.624  Sum_probs=26.7

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhccC
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHKK   48 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHtg   48 (163)
                      +|||+|.+|++.|..+..|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=3.1e-08  Score=55.06  Aligned_cols=26  Identities=31%  Similarity=0.671  Sum_probs=24.8

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhcc
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      |||+|.+|++.|..+..|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999985

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=1.7e-07  Score=53.50  Aligned_cols=28  Identities=25%  Similarity=0.596  Sum_probs=26.7

Q ss_pred             ceeeCCC--CCccccCchhhhhhhhhccCc
Q 035649           22 RVFPCLF--CSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        22 KPfkC~~--CgksFsssqsL~~HqriHtgE   49 (163)
                      |||+|.+  |++.|.....|..|+++|++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899999  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=1.8e-07  Score=53.38  Aligned_cols=28  Identities=29%  Similarity=0.672  Sum_probs=26.6

Q ss_pred             ceeeCCC--CCccccCchhhhhhhhhccCc
Q 035649           22 RVFPCLF--CSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        22 KPfkC~~--CgksFsssqsL~~HqriHtgE   49 (163)
                      |||+|++  |++.|.....|..|+++|++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999988  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=2.9e-07  Score=52.77  Aligned_cols=29  Identities=34%  Similarity=0.802  Sum_probs=26.9

Q ss_pred             ceeeCC--CCCccccCchhhhhhhhhccCcc
Q 035649           22 RVFPCL--FCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        22 KPfkC~--~CgksFsssqsL~~HqriHtgER   50 (163)
                      |||+|+  .|++.|.....|..|+++|++||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            689996  59999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=7.1e-07  Score=55.60  Aligned_cols=32  Identities=22%  Similarity=0.525  Sum_probs=30.1

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      +|||+| .|++.|.....|..|+++|++++||.
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~   32 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYG   32 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEE
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCc
Confidence            689999 59999999999999999999999985

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.95  E-value=1.7e-06  Score=51.55  Aligned_cols=32  Identities=53%  Similarity=1.133  Sum_probs=28.6

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhccCccch
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHKKERTA   52 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHtgERp~   52 (163)
                      .+.|+|.+|.+.|.+.++|++||+.|..++..
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~~   34 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   34 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHHH
Confidence            35799999999999999999999999887654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.93  E-value=2.8e-06  Score=48.93  Aligned_cols=29  Identities=24%  Similarity=0.629  Sum_probs=26.8

Q ss_pred             CceeeCCC--CCccccCchhhhhhhhhccCc
Q 035649           21 PRVFPCLF--CSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        21 ~KPfkC~~--CgksFsssqsL~~HqriHtgE   49 (163)
                      +|||.|.+  |++.|.....|..|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            58999998  999999999999999999754

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.92  E-value=1.7e-06  Score=48.85  Aligned_cols=27  Identities=33%  Similarity=0.668  Sum_probs=25.4

Q ss_pred             ceeeCCC--CCccccCchhhhhhhhhccC
Q 035649           22 RVFPCLF--CSRKFYSSQALGGHQNAHKK   48 (163)
Q Consensus        22 KPfkC~~--CgksFsssqsL~~HqriHtg   48 (163)
                      |||+|.+  |++.|.....|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999988  99999999999999999975

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=2.1e-06  Score=50.55  Aligned_cols=30  Identities=27%  Similarity=0.511  Sum_probs=28.2

Q ss_pred             eeCCC--CCccccCchhhhhhhhhccCccchH
Q 035649           24 FPCLF--CSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        24 fkC~~--CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      |.|.+  |++.|.....|..|+++|++||||.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~   33 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI   33 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEe
Confidence            78987  9999999999999999999999985

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=3.5e-06  Score=47.21  Aligned_cols=26  Identities=38%  Similarity=0.746  Sum_probs=24.5

Q ss_pred             ceeeCCC--CCccccCchhhhhhhhhcc
Q 035649           22 RVFPCLF--CSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        22 KPfkC~~--CgksFsssqsL~~HqriHt   47 (163)
                      |||.|++  |++.|.....|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899998  9999999999999999985

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.56  E-value=1.9e-05  Score=43.78  Aligned_cols=27  Identities=33%  Similarity=0.609  Sum_probs=25.1

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhcc
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      ++||.|..|++.|..+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999884

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=2.8e-05  Score=42.09  Aligned_cols=26  Identities=23%  Similarity=0.465  Sum_probs=24.3

Q ss_pred             eeeCCCCCccccCchhhhhhhhhccC
Q 035649           23 VFPCLFCSRKFYSSQALGGHQNAHKK   48 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~HqriHtg   48 (163)
                      |++|..|++.|+.+..|+-|++.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67999999999999999999999975

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=5.1e-05  Score=41.73  Aligned_cols=27  Identities=37%  Similarity=0.575  Sum_probs=25.1

Q ss_pred             eeeCCCCCccccCchhhhhhhhhccCc
Q 035649           23 VFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      .+.|.+|++.|..+..|++|+-+|++|
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            478999999999999999999999986

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00012  Score=40.41  Aligned_cols=29  Identities=28%  Similarity=0.472  Sum_probs=26.6

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhccCc
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      ++||+|..|...-..++.|..|.+.|+++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=8e-05  Score=42.84  Aligned_cols=32  Identities=22%  Similarity=0.473  Sum_probs=29.5

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhccCccchH
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHKKERTAA   53 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHtgERp~a   53 (163)
                      +.+.|..|++.|..-..|.+|.-.|++|+||+
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            56789999999999999999999999999973

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.76  E-value=0.00038  Score=37.26  Aligned_cols=24  Identities=42%  Similarity=0.841  Sum_probs=22.6

Q ss_pred             eeCCCCCccccCchhhhhhhhhcc
Q 035649           24 FPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        24 fkC~~CgksFsssqsL~~HqriHt   47 (163)
                      |+|..|.+.|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999985

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.58  E-value=0.00053  Score=37.12  Aligned_cols=27  Identities=33%  Similarity=0.577  Sum_probs=25.0

Q ss_pred             eeCCCCCccccCchhhhhhhhhccCcc
Q 035649           24 FPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        24 fkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      .+|+.|.+.|.++..|+.|-+.|++|+
T Consensus         1 vqcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           1 VECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             CcCcchHHHHHHhHhhhhccccccCCC
Confidence            379999999999999999999999985

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.0008  Score=36.73  Aligned_cols=27  Identities=22%  Similarity=0.413  Sum_probs=25.0

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhcc
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      .+||+|..|...-..+++|..|+++|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            479999999999999999999999985

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0011  Score=36.46  Aligned_cols=27  Identities=22%  Similarity=0.388  Sum_probs=25.4

Q ss_pred             eeCCCCCccccCchhhhhhhhhccCcc
Q 035649           24 FPCLFCSRKFYSSQALGGHQNAHKKER   50 (163)
Q Consensus        24 fkC~~CgksFsssqsL~~HqriHtgER   50 (163)
                      |.|.+|+......+-|..|.+.|+++|
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999875

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.0019  Score=36.26  Aligned_cols=28  Identities=29%  Similarity=0.625  Sum_probs=24.4

Q ss_pred             ceeeCCC--CCccccCchhhhhhh-hhccCc
Q 035649           22 RVFPCLF--CSRKFYSSQALGGHQ-NAHKKE   49 (163)
Q Consensus        22 KPfkC~~--CgksFsssqsL~~Hq-riHtgE   49 (163)
                      |||.|.+  |.+.|+..+....|+ ++|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6899988  999999999999997 777643

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.0013  Score=36.81  Aligned_cols=29  Identities=17%  Similarity=0.500  Sum_probs=26.2

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhccCc
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      ++||.|.+|...|..+..+.-|.+.|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999988763

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.00016  Score=42.17  Aligned_cols=27  Identities=26%  Similarity=0.263  Sum_probs=24.3

Q ss_pred             CCCCCCCcccccCCCCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEANVDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~~~HTg~KPfkC~~   28 (163)
                      |+.|.+.+.|..|.++|++++||+|.+
T Consensus        10 ~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2          10 GKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             CCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             CCeeCChhHhccccCeeCCCCCEeCCC
Confidence            567888899999999999999999974

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.55  E-value=0.0044  Score=34.10  Aligned_cols=29  Identities=31%  Similarity=0.553  Sum_probs=26.7

Q ss_pred             CceeeCCCCCccccCchhhhhhhhhccCc
Q 035649           21 PRVFPCLFCSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        21 ~KPfkC~~CgksFsssqsL~~HqriHtgE   49 (163)
                      ++.|.|..|...|.....|..||-.|++|
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56799999999999999999999999875

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.36  E-value=0.0043  Score=34.22  Aligned_cols=28  Identities=36%  Similarity=0.645  Sum_probs=25.1

Q ss_pred             ceeeCCC--CCccccCchhhhhhhhhccCc
Q 035649           22 RVFPCLF--CSRKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        22 KPfkC~~--CgksFsssqsL~~HqriHtgE   49 (163)
                      +||.|.+  |.+.|.+-..|.+|.-.|++|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5899986  999999999999999888875

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.03  E-value=0.007  Score=33.50  Aligned_cols=26  Identities=15%  Similarity=0.588  Sum_probs=23.0

Q ss_pred             ceeeCCC--CCccccCchhhhhhhhhcc
Q 035649           22 RVFPCLF--CSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        22 KPfkC~~--CgksFsssqsL~~HqriHt   47 (163)
                      |||.|..  |.+.|...++|..|++.+.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            6899987  9999999999999998653

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.86  E-value=0.0073  Score=36.10  Aligned_cols=27  Identities=15%  Similarity=0.535  Sum_probs=23.7

Q ss_pred             CCCceeeCCCCCccccCchhhhhhhhh
Q 035649           19 SSPRVFPCLFCSRKFYSSQALGGHQNA   45 (163)
Q Consensus        19 Tg~KPfkC~~CgksFsssqsL~~Hqri   45 (163)
                      ++-|||.|..|++.|--..++.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            577999999999999999999988643

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=94.84  E-value=0.0068  Score=33.93  Aligned_cols=26  Identities=31%  Similarity=0.646  Sum_probs=22.4

Q ss_pred             eeeCCCCCccccCchhhhhhh-hhccC
Q 035649           23 VFPCLFCSRKFYSSQALGGHQ-NAHKK   48 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~Hq-riHtg   48 (163)
                      ||.|.+|++.|....-|.+|+ +.|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999996 45554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.81  E-value=0.0073  Score=33.08  Aligned_cols=25  Identities=24%  Similarity=0.622  Sum_probs=22.6

Q ss_pred             ceeeCCC--CCccccCchhhhhhhhhc
Q 035649           22 RVFPCLF--CSRKFYSSQALGGHQNAH   46 (163)
Q Consensus        22 KPfkC~~--CgksFsssqsL~~HqriH   46 (163)
                      .||+|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899975  999999999999998877

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.75  E-value=0.0095  Score=32.83  Aligned_cols=24  Identities=21%  Similarity=0.538  Sum_probs=21.9

Q ss_pred             ceeeCCCCCccccCchhhhhhhhh
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNA   45 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~Hqri   45 (163)
                      +||+|.+|......+++|+.|...
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            689999999999999999999865

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.53  E-value=0.0016  Score=38.39  Aligned_cols=27  Identities=19%  Similarity=0.164  Sum_probs=23.3

Q ss_pred             CCCCCCCcccccCC-CCCCCCceeeCCC
Q 035649            2 GDDHHRGKVSAEAN-VDDSSPRVFPCLF   28 (163)
Q Consensus         2 g~~~~~~~~~~~h~-~~HTg~KPfkC~~   28 (163)
                      |+.|.....|..|. ++|+++|||+|.+
T Consensus        12 gk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1          12 GKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             CCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            67788889999996 5899999999974

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.90  E-value=0.015  Score=31.50  Aligned_cols=25  Identities=32%  Similarity=0.293  Sum_probs=23.0

Q ss_pred             eeeCCCCCccccCchhhhhhhhhcc
Q 035649           23 VFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      |.+|.+|....+++..|..|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            6799999999999999999999884

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.73  E-value=0.015  Score=30.81  Aligned_cols=22  Identities=27%  Similarity=0.605  Sum_probs=20.5

Q ss_pred             eeeCCCCCccccCchhhhhhhh
Q 035649           23 VFPCLFCSRKFYSSQALGGHQN   44 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~Hqr   44 (163)
                      ||+|..|+..|-++..|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999974

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.69  E-value=0.015  Score=31.83  Aligned_cols=24  Identities=29%  Similarity=0.539  Sum_probs=21.3

Q ss_pred             ceeeCCCCCccccCchhhhhhhhh
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNA   45 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~Hqri   45 (163)
                      +||+|.+|+.--.+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            689999999888899999999754

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.72  E-value=0.033  Score=30.42  Aligned_cols=23  Identities=22%  Similarity=0.590  Sum_probs=21.5

Q ss_pred             eeeCCCCCccccCchhhhhhhhh
Q 035649           23 VFPCLFCSRKFYSSQALGGHQNA   45 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~Hqri   45 (163)
                      ||.|..|...|..+.+|..||..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            78999999999999999999975

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.14  E-value=0.03  Score=30.18  Aligned_cols=21  Identities=24%  Similarity=0.642  Sum_probs=19.4

Q ss_pred             eeeCCCCCccccCchhhhhhh
Q 035649           23 VFPCLFCSRKFYSSQALGGHQ   43 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~Hq   43 (163)
                      ||+|..|++.|..+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            789999999999999999885

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.81  E-value=0.051  Score=31.65  Aligned_cols=28  Identities=25%  Similarity=0.590  Sum_probs=24.1

Q ss_pred             CCceeeCC--CCCccccCchhhhhhhhhcc
Q 035649           20 SPRVFPCL--FCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        20 g~KPfkC~--~CgksFsssqsL~~HqriHt   47 (163)
                      .+|||.|.  -|+..|.+...|..|+..|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            47999994  59999999999999987663

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.84  E-value=0.17  Score=32.86  Aligned_cols=39  Identities=31%  Similarity=0.548  Sum_probs=31.0

Q ss_pred             CCCceeeCCCCCccccCchhhhhhhhhccCccchHHhhhhc
Q 035649           19 SSPRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRV   59 (163)
Q Consensus        19 Tg~KPfkC~~CgksFsssqsL~~HqriHtgERp~a~r~~~~   59 (163)
                      ....-|+|..|...|.+-..|..|.+.|..|  |.+|++|.
T Consensus        14 ~~s~~yQC~HCd~K~~s~~el~~hl~~hnee--fqkra~rq   52 (75)
T d1x6fa1          14 LQNSTYQCKHCDSKLQSTAELTSHLNIHNEE--FQKRAKRQ   52 (75)
T ss_dssp             CCCSCEECSSSCCEESSHHHHHHHHHHHHHH--HHHHCCCC
T ss_pred             cCCceeeechhHHHHhhHHHHHHHHHhccHH--HHHHHHHH
Confidence            4456799999999999999999999998653  55555544

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.34  E-value=0.25  Score=27.98  Aligned_cols=26  Identities=19%  Similarity=0.505  Sum_probs=21.6

Q ss_pred             eeeCCCCCccccCchhhhhhhhhccC
Q 035649           23 VFPCLFCSRKFYSSQALGGHQNAHKK   48 (163)
Q Consensus        23 PfkC~~CgksFsssqsL~~HqriHtg   48 (163)
                      .|.|..|++.|.....+.+|-..-.+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            58999999999999999988655443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.37  E-value=0.24  Score=30.19  Aligned_cols=26  Identities=27%  Similarity=0.700  Sum_probs=22.6

Q ss_pred             ceeeCCCCCccccCchhhhhhhhhcc
Q 035649           22 RVFPCLFCSRKFYSSQALGGHQNAHK   47 (163)
Q Consensus        22 KPfkC~~CgksFsssqsL~~HqriHt   47 (163)
                      --|.|..|+|.|.....|..|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35789999999999999999987664

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.08  E-value=0.34  Score=27.19  Aligned_cols=19  Identities=32%  Similarity=0.328  Sum_probs=16.8

Q ss_pred             ccccCchhhhhhhhhccCc
Q 035649           31 RKFYSSQALGGHQNAHKKE   49 (163)
Q Consensus        31 ksFsssqsL~~HqriHtgE   49 (163)
                      +.|.....|..|++.|++|
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            4588999999999999986