Citrus Sinensis ID: 035782

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
Protein Sequence
ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDVASTN
Secondary Structure (PSIPRED)
ccccccccEEEcccccccccccccccEEEccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccHcHcccHHcccccccEEEEEEEEEEcccccHHHHHcccccccccHEHHHEEEEEEHcccccccccccccHHHHHHHHHHHHccHHHHHcHHHccccccccccHHHHHHHHHHHHHHHHccHcccccHHHHHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
ILLDEDMVAHVsdfgiskllgdgddsvTQTMTMATIgymapeygsegivstkcdvYSYGVLLMETftrkkptdemfigemsLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALdccmespdqriYMTDAAAKLKKIKEKFLDDVASTN
Flexible Loop (DISEMBL)
ILLDEDMVAHVSDFgiskllgdgddSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKekflddvastn
Low Complexity Region (SEG)
ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDVASTN
Disordered region (IsUnstruct)
*******VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI************
Disordered Region (DISOPRED)
ILLDEDMVAHVSDFGISKLLG***********MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD*****
Disordered Region (DISEMBL)
ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDVASTN
Disordered Region (DISPRO)
ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE**********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDVASTN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	159	2.2.26 [Sep-21-2011]
C0LGP4	1010	Probable LRR receptor-lik	no	no	0.993	0.156	0.359	1e-25
Q9SD62	1025	Putative receptor-like pr	no	no	0.968	0.150	0.372	2e-24
P93194	1109	Receptor-like protein kin	N/A	no	0.911	0.130	0.398	8e-23
C0LGT6	1031	LRR receptor-like serine/	no	no	0.893	0.137	0.394	1e-21
Q9LHP4	1141	Receptor-like protein kin	no	no	0.911	0.127	0.366	4e-20
Q8L899	1207	Systemin receptor SR160 O	N/A	no	0.962	0.126	0.356	2e-19
Q8GUQ5	1207	Brassinosteroid LRR recep	N/A	no	0.962	0.126	0.356	2e-19
Q9FL28	1173	LRR receptor-like serine/	no	no	0.937	0.127	0.360	1e-18
C0LGV1	1135	LRR receptor-like serine/	no	no	0.880	0.123	0.378	2e-18
Q9SSL9	1123	Leucine-rich repeat recep	no	no	0.905	0.128	0.352	4e-18

>sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1

 Score =  115 bits (287), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/164 (35%), Positives = 94/164 (57%), Gaps = 6/164 (3%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDD-----SVTQTMTMATIGYMAPEYGSEGIVSTKCDV 55
            +LLD+D+ AHVSDFG+++LL   D+      ++      TIGY APEYG  G  S   DV
Sbjct: 845  VLLDDDLTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEYGVGGQPSINGDV 904

Query: 56   YSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLAR-DEQSFFVKMD 114
            YS+G+LL+E FT K+PT+E+F G  +L  +   +L   +  ++D ++     +  F  ++
Sbjct: 905  YSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESILHIGLRVGFPVVE 964

Query: 115  CLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDVAST 158
            CL+ +  + L CC ESP  R+  +    +L  I+E+F     +T
Sbjct: 965  CLTMVFEVGLRCCEESPMNRLATSIVVKELISIRERFFKASRTT 1008

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1

 Score =  111 bits (277), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 60/161 (37%), Positives = 92/161 (57%), Gaps = 7/161 (4%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSV-----TQTMTMATIGYMAPEYGSEGIVSTKCDV 55
            ILLD+D+ AHVSDFG+++LL   D        +      TIGY APEYG  G  S   DV
Sbjct: 862  ILLDKDLTAHVSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAPEYGMGGHPSIMGDV 921

Query: 56   YSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSG-ELTQVIDANLARDEQS-FFVKM 113
            YS+G++L+E FT K+PT+++F+  ++L  +   +L   +   + D  + R   +  F  +
Sbjct: 922  YSFGIVLLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILRGAYAQHFNMV 981

Query: 114  DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD 154
            +CL+ +  + + C  ESP  RI M +A +KL  I+E F  D
Sbjct: 982  ECLTLVFRVGVSCSEESPVNRISMAEAISKLVSIRESFFRD 1022

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P93194|RPK1_IPONI Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2

 Score =  105 bits (263), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            ILLD D+  H+SDFGI+KLL     S+       TIGYMAPE     + S + DVYSYGV
Sbjct: 948  ILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGV 1007

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNK--SLSGELTQVIDANLARDEQSFFVKMDCLSS 118
            +L+E  TRKK  D  F GE  +  WV    + +GE+ +++D +L  DE      M+ ++ 
Sbjct: 1008 VLLELITRKKALDPSFNGETDIVGWVRSVWTQTGEIQKIVDPSLL-DELIDSSVMEQVTE 1066

Query: 119  IMHLALDCCMESPDQRIYMTDAAAKLKK 146
             + LAL C  +  D+R  M D   +L +
Sbjct: 1067 ALSLALRCAEKEVDKRPTMRDVVKQLTR 1094

Possible role in short-day photoperiod floral induction.

Ipomoea nil (taxid: 35883)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1

 Score =  102 bits (253), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 62/157 (39%), Positives = 86/157 (54%), Gaps = 15/157 (9%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGD-----DSVTQTMTMATIGYMAPEYGSEGIVSTKCDV 55
            ILLD+D+ AHVSDFG+++LL   D     +  +      TIGY APEYG  G  S + DV
Sbjct: 855  ILLDDDLTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDV 914

Query: 56   YSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDC 115
            YS+G+LL+E F+ KKPTDE F G+ +L  +    LSG  T    +N A DE         
Sbjct: 915  YSFGILLLEMFSGKKPTDESFAGDYNLHSYTKSILSG-CTSSGGSN-AIDEG-------- 964

Query: 116  LSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL 152
            L  ++ + + C  E P  R+   +A  +L  I+ KF 
Sbjct: 965  LRLVLQVGIKCSEEYPRDRMRTDEAVRELISIRSKFF 1001

Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LHP4|RCH2_ARATH Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1

 Score = 97.1 bits (240), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 5/150 (3%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            IL+  D   +++DFG++KL+ +GD          + GY+APEYG    ++ K DVYSYGV
Sbjct: 925  ILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGV 984

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
            +++E  T K+P D      + L DWV ++  G L +V+D+ L    ++   + D +  ++
Sbjct: 985  VVLEVLTGKQPIDPTVPEGIHLVDWVRQN-RGSL-EVLDSTLRSRTEA---EADEMMQVL 1039

Query: 121  HLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
              AL C   SPD+R  M D AA LK+IK++
Sbjct: 1040 GTALLCVNSSPDERPTMKDVAAMLKEIKQE 1069

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8L899|BRI1_SOLPE Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 7/160 (4%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            +LLDE++ A VSDFG+++L+   D  ++ +    T GY+ PEY      STK DVYSYGV
Sbjct: 1020 VLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGV 1079

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
            +L+E  T K+PTD    G+ +L  WV     G++T V D  L +++ S  +++     + 
Sbjct: 1080 VLLELLTGKQPTDSADFGDNNLVGWVKLHAKGKITDVFDRELLKEDASIEIEL-----LQ 1134

Query: 121  HLALDC-CMESPD-QRIYMTDAAAKLKKIKEKFLDDVAST 158
            HL + C C++    +R  M    A  K+I+     D  ST
Sbjct: 1135 HLKVACACLDDRHWKRPTMIQVMAMFKEIQAGSGMDSTST 1174

Receptor with a serine/threonine-protein kinase activity. Involved in the perception of systemin, a peptide hormone responsible for the systemic activation of defense genes in leaves of wounded plants. May also regulate, in response to brassinosteroid binding, a signaling cascade involved in plant development.

Solanum peruvianum (taxid: 4082)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GUQ5|BRI1_SOLLC Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 7/160 (4%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            +LLDE++ A VSDFG+++L+   D  ++ +    T GY+ PEY      STK DVYSYGV
Sbjct: 1020 VLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGV 1079

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
            +L+E  T K+PTD    G+ +L  WV     G++T V D  L +++ S  +++     + 
Sbjct: 1080 VLLELLTGKQPTDSADFGDNNLVGWVKLHAKGKITDVFDRELLKEDASIEIEL-----LQ 1134

Query: 121  HLALDC-CMESPD-QRIYMTDAAAKLKKIKEKFLDDVAST 158
            HL + C C++    +R  M    A  K+I+     D  ST
Sbjct: 1135 HLKVACACLDDRHWKRPTMIQVMAMFKEIQAGSGMDSTST 1174

Receptor with a serine/threonine-protein kinase activity. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development, including expression of light- and stress-regulated genes, promotion of cell elongation, normal leaf and chloroplast senescence, and flowering. May be involved in a feedback regulation of brassinosteroid biosynthesis. May be also involved in the perception of systemin, a peptide hormone responsible for the systemic activation of defense genes in leaves of wounded plants.

Solanum lycopersicum (taxid: 4081)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FL28|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 57/158 (36%), Positives = 88/158 (55%), Gaps = 9/158 (5%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA---TIGYMAPEYGSEGIVSTKCDVYS 57
            ILLD D VAHVSDFG +++LG  +D  T   T A   TIGY+APE+     V+TK DV+S
Sbjct: 1003 ILLDSDRVAHVSDFGTARILGFREDGSTTASTSAFEGTIGYLAPEFAYMRKVTTKADVFS 1062

Query: 58   YGVLLMETFTRKKPT--DEMFIGEMSLRDWVNKSLSG---ELTQVIDANLARDEQSFFVK 112
            +G+++ME  T+++PT  ++    +M+LR  V KS+      + +V+D  L  D      +
Sbjct: 1063 FGIIMMELMTKQRPTSLNDEDSQDMTLRQLVEKSIGNGRKGMVRVLDMELG-DSIVSLKQ 1121

Query: 113  MDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
             + +   + L L C    P+ R  M +    L K++ K
Sbjct: 1122 EEAIEDFLKLCLFCTSSRPEDRPDMNEILTHLMKLRGK 1159

Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of flagellin (flg22), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Flagellin-binding to the receptor is the first step to initiate the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6), resulting in enhanced resistance against pathogens. Binding to the effector AvrPto1 from Pseudomonas syringae blocks the downstream plant immune response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGV1|RCH1_ARATH LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 8/148 (5%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            IL+  D   ++ DFG++KL+ DGD + +      + GY+APEYG    ++ K DVYSYGV
Sbjct: 926  ILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGV 985

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANL-ARDEQSFFVKMDCLSSI 119
            +++E  T K+P D      + + DWV K       QVID  L AR E      M  L   
Sbjct: 986  VVLEVLTGKQPIDPTIPDGLHIVDWVKKIRD---IQVIDQGLQARPESEVEEMMQTLG-- 1040

Query: 120  MHLALDCCMESPDQRIYMTDAAAKLKKI 147
              +AL C    P+ R  M D AA L +I
Sbjct: 1041 --VALLCINPIPEDRPTMKDVAAMLSEI 1066

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SSL9|PEPR1_ARATH Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1

 Score = 90.1 bits (222), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 12/156 (7%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTM-ATIGYMAPEYGSEGIVSTKCDVYSYG 59
            IL+D D+  H+ DFG+++LL   DDS   T T+  T GY+APE   + +   + DVYSYG
Sbjct: 960  ILMDSDLEPHIGDFGLARLL---DDSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYG 1016

Query: 60   VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGE-------LTQVIDANLARDEQSFFVK 112
            V+L+E  TRK+  D+ F     +  WV  +LS         +T ++D  L  DE      
Sbjct: 1017 VVLLELVTRKRAVDKSFPESTDIVSWVRSALSSSNNNVEDMVTTIVDPILV-DELLDSSL 1075

Query: 113  MDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148
             + +  +  LAL C  + P  R  M DA   L+ +K
Sbjct: 1076 REQVMQVTELALSCTQQDPAMRPTMRDAVKLLEDVK 1111

Acts as a receptor for PEP defense peptides. Unlike typical immune receptors, senses an endogenous elicitor that potentiates PAMP-inducible plant responses.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
224116832	1061	predicted protein [Populus trichocarpa]	0.968	0.145	0.645	4e-53
255572272	1089	serine-threonine protein kinase, plant-t	0.968	0.141	0.628	6e-48
449465016	1092	PREDICTED: probable LRR receptor-like se	0.949	0.138	0.633	1e-47
147853795	1420	hypothetical protein VITISV_005816 [Viti	0.949	0.106	0.603	1e-46
359485176	1160	PREDICTED: probable LRR receptor-like se	0.943	0.129	0.614	3e-46
255578886	1043	serine-threonine protein kinase, plant-t	0.968	0.147	0.570	8e-46
359483677	1229	PREDICTED: LRR receptor-like serine/thre	0.943	0.122	0.601	1e-45
359485453	1202	PREDICTED: probable LRR receptor-like se	0.911	0.120	0.601	5e-45
297740829	1892	unnamed protein product [Vitis vinifera]	0.943	0.079	0.601	7e-45
359485451	1454	PREDICTED: LRR receptor-like serine/thre	0.943	0.103	0.594	8e-45

>gi|224116832|ref|XP_002317405.1| predicted protein [Populus trichocarpa] gi|222860470|gb|EEE98017.1| predicted protein [Populus trichocarpa]

 Score =  212 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 100/155 (64%), Positives = 126/155 (81%), Gaps = 1/155 (0%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            +L++EDMVAHVSDFGIS+LLG+GD +VTQT+T+ATIGYMAPEYG EGIVS K DVYSYG+
Sbjct: 900  VLINEDMVAHVSDFGISRLLGEGD-AVTQTLTLATIGYMAPEYGLEGIVSVKGDVYSYGI 958

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
             LMETFTRKKPTD+MF GEMSL++WV +SL   +T+VIDANL  +E+ F  K DC++SI+
Sbjct: 959  FLMETFTRKKPTDDMFGGEMSLKNWVKQSLPKAITEVIDANLLIEEEHFVAKKDCITSIL 1018

Query: 121  HLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDV 155
            +LAL+C  + P +RI M D    L+KIK K+  DV
Sbjct: 1019 NLALECSADLPGERICMRDVLPALEKIKLKYKKDV 1053

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572272|ref|XP_002527075.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223533580|gb|EEF35319.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  195 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 98/156 (62%), Positives = 119/156 (76%), Gaps = 2/156 (1%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            +LL+EDMVA ++DFGISKLLG+ + SV QTMT+ATIGYMAPEYGSEGIVS + DVYSYGV
Sbjct: 931  VLLNEDMVAFLADFGISKLLGE-EGSVMQTMTLATIGYMAPEYGSEGIVSVRGDVYSYGV 989

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN-LARDEQSFFVKMDCLSSI 119
            LLMETFT+KKPTD+MF  ++SL+ WV +SLS E+TQVIDAN L  +E     K DC+ SI
Sbjct: 990  LLMETFTQKKPTDKMFTEQLSLKSWVEQSLSCEVTQVIDANLLGIEEDHLAAKKDCIVSI 1049

Query: 120  MHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDV 155
            + LAL C  + P  RI M      L+KIK KFL D+
Sbjct: 1050 LKLALQCSADLPHDRIDMKHVVTTLQKIKTKFLRDI 1085

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465016|ref|XP_004150225.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cucumis sativus]

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 97/153 (63%), Positives = 115/153 (75%), Gaps = 2/153 (1%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            ILLD DMVAH++DFGISKLLG GD S+TQT+T+AT+GYMAPE G +GIVS KCDVYSYG+
Sbjct: 936  ILLDGDMVAHLTDFGISKLLGGGD-SITQTITLATVGYMAPELGLDGIVSRKCDVYSYGI 994

Query: 61   LLMETFTRKKPTDEMF-IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
            LLMETFTRKKPTDEMF  GEMSLR+WV K+    +  V+D +L  D++SF    +CLSSI
Sbjct: 995  LLMETFTRKKPTDEMFSAGEMSLREWVAKAYPHSINNVVDPDLLNDDKSFNYASECLSSI 1054

Query: 120  MHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL 152
            M LAL C  ESP++R    D    L KIK   L
Sbjct: 1055 MLLALTCTAESPEKRASSKDVLNSLNKIKAMIL 1087

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147853795|emb|CAN81714.1| hypothetical protein VITISV_005816 [Vitis vinifera]

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 93/154 (60%), Positives = 119/154 (77%), Gaps = 3/154 (1%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            +LLD+DMVAH+SDFGI+KLL  G + + +T T+ TIGYMAPEYGSEGIVSTKCD YSYG+
Sbjct: 1048 VLLDDDMVAHISDFGIAKLLM-GSEFMKRTKTLGTIGYMAPEYGSEGIVSTKCDTYSYGI 1106

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDE-QSFFVKMDCLSSI 119
            +LME F RKKPTDEMF+ E++L+ WV  S +  + +VIDANL  +E +SF +K  C SSI
Sbjct: 1107 ILMEIFVRKKPTDEMFVEELTLKSWVESS-ANNIMEVIDANLLTEEDESFALKQACFSSI 1165

Query: 120  MHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD 153
            M LALDC +E P++RI M D  A+LKKI  + +D
Sbjct: 1166 MTLALDCTIEPPEKRINMKDVVARLKKILNQIVD 1199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485176|ref|XP_002280075.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 94/153 (61%), Positives = 117/153 (76%), Gaps = 3/153 (1%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            +LLDE+MVA + DFGISKLL +  +S+ QT T+ TIGYMAPEYGSEGIVST+ DVYSYG+
Sbjct: 1008 VLLDEEMVARLGDFGISKLLTE-TESMEQTRTLGTIGYMAPEYGSEGIVSTRGDVYSYGI 1066

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDE-QSFFVKMDCLSSI 119
            ++METF RKKPTDEMF GE++LR WV +SL+G + +V+D NL R E Q F +K  CL SI
Sbjct: 1067 MMMETFARKKPTDEMFGGEVTLRSWV-ESLAGRVMEVVDGNLVRREDQHFGIKESCLRSI 1125

Query: 120  MHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL 152
            M LAL+C  ESP  RI M +   +LKKI+ K L
Sbjct: 1126 MALALECTTESPRDRIDMKEVVVRLKKIRIKLL 1158

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578886|ref|XP_002530297.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223530195|gb|EEF32104.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 89/156 (57%), Positives = 118/156 (75%), Gaps = 2/156 (1%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            ILLDE+MVAHV+DFGI+KLLGD + S  QT+T+AT+GYMAPEYGSEG+VST  D+YS+G+
Sbjct: 888  ILLDENMVAHVTDFGIAKLLGD-EHSFIQTITLATVGYMAPEYGSEGVVSTGGDIYSFGI 946

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLAR-DEQSFFVKMDCLSSI 119
            LLMETFTRKKPTD+MF  E+S++ WV +S+ G +TQ+ D +L R +EQ F  K DC+ S+
Sbjct: 947  LLMETFTRKKPTDDMFNEEISMKQWVQESVPGGVTQITDPDLLRIEEQHFSAKKDCILSV 1006

Query: 120  MHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDV 155
            M +AL C  + P++R  + D    L   K KFL D+
Sbjct: 1007 MQVALQCSADLPEERPNIRDVLNTLNHTKVKFLKDI 1042

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483677|ref|XP_003633000.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Vitis vinifera]

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 92/153 (60%), Positives = 118/153 (77%), Gaps = 3/153 (1%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            +LLD+DMVAHV+DFGI+KLL    +S+ QT T+ TIGYMAPE+GS+GIVSTK DVYSYG+
Sbjct: 1078 VLLDDDMVAHVADFGITKLLTK-TESMQQTKTLGTIGYMAPEHGSDGIVSTKSDVYSYGI 1136

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDE-QSFFVKMDCLSSI 119
            LLME F+RKKP DEMF G+++L+ WV +SLS  + QV+DANL R E +    K+ CLSSI
Sbjct: 1137 LLMEVFSRKKPMDEMFTGDLTLKTWV-ESLSNSVIQVVDANLLRREDEDLATKLSCLSSI 1195

Query: 120  MHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL 152
            M LAL C  +SP++R+ M DA  +LKK + K L
Sbjct: 1196 MALALACTTDSPEERLNMKDAVVELKKSRMKLL 1228

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485453|ref|XP_003633276.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 89/148 (60%), Positives = 115/148 (77%), Gaps = 3/148 (2%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            +LLD+DMVAH+SDFGI+KLL  G + + +T T+ T+GYMAPEYGSEGIVSTK D+YSYG+
Sbjct: 1047 VLLDDDMVAHISDFGIAKLLM-GSEFMKRTKTLGTVGYMAPEYGSEGIVSTKGDIYSYGI 1105

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDE-QSFFVKMDCLSSI 119
            LLMETF RKKPTDEMF+ E++L+ WV  S +  + +VIDANL  +E +SF +K  C SSI
Sbjct: 1106 LLMETFVRKKPTDEMFVEELTLKSWVESS-TNNIMEVIDANLLTEEDESFALKRACFSSI 1164

Query: 120  MHLALDCCMESPDQRIYMTDAAAKLKKI 147
            M LALDC +E P++RI   D   +LKK+
Sbjct: 1165 MTLALDCTVEPPEKRINTKDVVVRLKKL 1192

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740829|emb|CBI31011.3| unnamed protein product [Vitis vinifera]

 Score =  184 bits (468), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 92/153 (60%), Positives = 117/153 (76%), Gaps = 3/153 (1%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            +LLD+DMVAHV+DFGI+KLL +  +S+ QT T++TIGYMAPE+GS GIVSTK DVYSYG+
Sbjct: 1741 VLLDDDMVAHVADFGIAKLLTE-TESMQQTKTLSTIGYMAPEHGSAGIVSTKSDVYSYGI 1799

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDE-QSFFVKMDCLSSI 119
            LLME F RKKP DEMF G+++L+ WV +SLS  + QV+D NL R E +    K+ CLSSI
Sbjct: 1800 LLMEVFARKKPMDEMFTGDLTLKTWV-ESLSNSVIQVVDVNLLRREDEDLATKLSCLSSI 1858

Query: 120  MHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL 152
            M LAL C  +SP++RI M DA  +LKK + K L
Sbjct: 1859 MALALACTTDSPEERIDMKDAVVELKKSRIKLL 1891

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485451|ref|XP_002276944.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Vitis vinifera]

 Score =  184 bits (468), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 91/153 (59%), Positives = 117/153 (76%), Gaps = 3/153 (1%)

Query: 1    ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            ILLD+DMVAHV DFGI++LL +  +S+ QT T+ TIGYMAPEYGS+GIVSTK DV+SYG+
Sbjct: 1303 ILLDDDMVAHVGDFGIARLLTE-TESMQQTKTLGTIGYMAPEYGSDGIVSTKGDVFSYGI 1361

Query: 61   LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDE-QSFFVKMDCLSSI 119
            +LME F RKKP DEMF G+++L+ WV +SL+  + +V+DANL R E + F  K+ CLSSI
Sbjct: 1362 MLMEVFARKKPMDEMFNGDLTLKSWV-ESLADSMIEVVDANLLRREDEDFATKLSCLSSI 1420

Query: 120  MHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL 152
            M LAL C  +SP++RI M D    LKKIK + L
Sbjct: 1421 MALALACTTDSPEERIDMKDVVVGLKKIKIELL 1453

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
TAIR|locus:2075631	1009	AT3G47090 [Arabidopsis thalian	0.949	0.149	0.407	3.2e-24
UNIPROTKB|Q40640	1025	Xa21 "Receptor kinase-like pro	0.937	0.145	0.395	1.5e-23
TAIR|locus:2079157	1011	AT3G47580 [Arabidopsis thalian	0.949	0.149	0.401	1.8e-23
TAIR|locus:2079142	1010	AT3G47570 [Arabidopsis thalian	0.949	0.149	0.382	3.8e-23
TAIR|locus:2075661	1025	AT3G47110 [Arabidopsis thalian	0.968	0.150	0.385	1.3e-22
UNIPROTKB|P93194	1109	INRPK1 "Receptor-like protein	0.911	0.130	0.398	2.9e-21
TAIR|locus:2149922	1031	EFR "EF-TU receptor" [Arabidop	0.886	0.136	0.410	1.7e-19
TAIR|locus:2085949	1141	AT3G24240 [Arabidopsis thalian	0.905	0.126	0.377	3.2e-19
TAIR|locus:2170483	1173	FLS2 "FLAGELLIN-SENSITIVE 2" [	0.937	0.127	0.367	8.9e-19
TAIR|locus:2175703	502	AT5G39390 [Arabidopsis thalian	0.886	0.280	0.378	1.1e-18

TAIR|locus:2075631 AT3G47090 [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 3.2e-24, P = 3.2e-24
 Identities = 64/157 (40%), Positives = 95/157 (60%)

Query:     1 ILLDEDMVAHVSDFGISKLLGDGD-DSVTQTMTMA----TIGYMAPEYGSEGIVSTKCDV 55
             ILLD+D+ AHVSDFG+++LL   D +S    ++ A    TIGY APEYG  G  S   DV
Sbjct:   844 ILLDDDLTAHVSDFGLARLLLKFDQESFFNQLSSAGVRGTIGYAAPEYGMGGQPSIHGDV 903

Query:    56 YSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSF-FVKMD 114
             YS+GVL++E FT K+PT+E+F G  +L  +   +L   +  + D ++        F  ++
Sbjct:   904 YSFGVLVLEMFTGKRPTNELFGGNFTLNSYTKAALPERVLDIADKSILHSGLRVGFPVLE 963

Query:   115 CLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151
             CL  I+ + L CC ESP  R+  ++AA +L  I+E+F
Sbjct:   964 CLKGILDVGLRCCEESPLNRLATSEAAKELISIRERF 1000

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

UNIPROTKB|Q40640 Xa21 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)]

 Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 64/162 (39%), Positives = 90/162 (55%)

Query:     1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQ-TMTMA---TIGYMAPEYGSEGIVSTKCDVY 56
             +LLD DMVAHV DFG++++L DG   + Q T +M    TIGY APEYG   I ST  D+Y
Sbjct:   848 VLLDSDMVAHVGDFGLARILVDGTSLIQQSTSSMGFIGTIGYAAPEYGVGLIASTHGDIY 907

Query:    57 SYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKM--- 113
             SYG+L++E  T K+PTD  F  ++ LR +V   L G +T V+D  L  D +++       
Sbjct:   908 SYGILVLEIVTGKRPTDSTFRPDLGLRQYVELGLHGRVTDVVDTKLILDSENWLNSTNNS 967

Query:   114 ------DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
                   +C+  ++ L L C  E P  R    D   +L  IK+
Sbjct:   968 PCRRITECIVWLLRLGLSCSQELPSSRTPTGDIIDELNAIKQ 1009

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2079157 AT3G47580 [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 63/157 (40%), Positives = 97/157 (61%)

Query:     1 ILLDEDMVAHVSDFGISKLLGDGD-DSVTQTMTMA----TIGYMAPEYGSEGIVSTKCDV 55
             +LL++D+ AHVSDFG+++LL   D +S    ++ A    TIGY APEYG  G  S   DV
Sbjct:   846 VLLEDDLTAHVSDFGLARLLLKFDKESFLNQLSSAGVRGTIGYAAPEYGMGGQPSIHGDV 905

Query:    56 YSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVID-ANLARDEQSFFVKMD 114
             YS+GVLL+E FT K+PTDE+F G ++L  +   +L  ++ ++ D A L    +  F   +
Sbjct:   906 YSFGVLLLEMFTGKRPTDELFGGNLTLHSYTKLALPEKVFEIADKAILHIGLRVGFRTAE 965

Query:   115 CLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151
             CL+ ++ + L CC E P  R+  ++ A +L  I+E+F
Sbjct:   966 CLTLVLEVGLRCCEEYPTNRLATSEVAKELISIRERF 1002

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2079142 AT3G47570 [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 60/157 (38%), Positives = 94/157 (59%)

Query:     1 ILLDEDMVAHVSDFGISKLLGDGDD-SVTQTMTMA----TIGYMAPEYGSEGIVSTKCDV 55
             +LLD+D+ AHVSDFG+++LL   D+ S    ++ A    TIGY APEYG  G  S   DV
Sbjct:   845 VLLDDDLTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEYGVGGQPSINGDV 904

Query:    56 YSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLAR-DEQSFFVKMD 114
             YS+G+LL+E FT K+PT+E+F G  +L  +   +L   +  ++D ++     +  F  ++
Sbjct:   905 YSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESILHIGLRVGFPVVE 964

Query:   115 CLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151
             CL+ +  + L CC ESP  R+  +    +L  I+E+F
Sbjct:   965 CLTMVFEVGLRCCEESPMNRLATSIVVKELISIRERF 1001

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2075661 AT3G47110 [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 62/161 (38%), Positives = 95/161 (59%)

Query:     1 ILLDEDMVAHVSDFGISKLLGDGD-DSVTQTMTMA----TIGYMAPEYGSEGIVSTKCDV 55
             ILLD+D+ AHVSDFG+++LL   D D+     + A    TIGY APEYG  G  S   DV
Sbjct:   862 ILLDKDLTAHVSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAPEYGMGGHPSIMGDV 921

Query:    56 YSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSG-ELTQVIDANLARDEQS-FFVKM 113
             YS+G++L+E FT K+PT+++F+  ++L  +   +L   +   + D  + R   +  F  +
Sbjct:   922 YSFGIVLLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILRGAYAQHFNMV 981

Query:   114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD 154
             +CL+ +  + + C  ESP  RI M +A +KL  I+E F  D
Sbjct:   982 ECLTLVFRVGVSCSEESPVNRISMAEAISKLVSIRESFFRD 1022

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|P93194 INRPK1 "Receptor-like protein kinase" [Ipomoea nil (taxid:35883)]

 Score = 262 (97.3 bits), Expect = 2.9e-21, P = 2.9e-21
 Identities = 59/148 (39%), Positives = 83/148 (56%)

Query:     1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
             ILLD D+  H+SDFGI+KLL     S+       TIGYMAPE     + S + DVYSYGV
Sbjct:   948 ILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGV 1007

Query:    61 LLMETFTRKKPTDEMFIGEMSLRDWVNK--SLSGELTQVIDANLARDEQSFFVKMDCLSS 118
             +L+E  TRKK  D  F GE  +  WV    + +GE+ +++D +L  DE      M+ ++ 
Sbjct:  1008 VLLELITRKKALDPSFNGETDIVGWVRSVWTQTGEIQKIVDPSLL-DELIDSSVMEQVTE 1066

Query:   119 IMHLALDCCMESPDQRIYMTDAAAKLKK 146
              + LAL C  +  D+R  M D   +L +
Sbjct:  1067 ALSLALRCAEKEVDKRPTMRDVVKQLTR 1094

GO:0005524 "ATP binding" evidence=NAS

GO:0005576 "extracellular region" evidence=NAS

GO:0005886 "plasma membrane" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=NAS

GO:0019199 "transmembrane receptor protein kinase activity" evidence=NAS

TAIR|locus:2149922 EFR "EF-TU receptor" [Arabidopsis thaliana (taxid:3702)]

 Score = 245 (91.3 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 64/156 (41%), Positives = 88/156 (56%)

Query:     1 ILLDEDMVAHVSDFGISKLLGDGD-DSVTQTMTMA----TIGYMAPEYGSEGIVSTKCDV 55
             ILLD+D+ AHVSDFG+++LL   D +S     + A    TIGY APEYG  G  S + DV
Sbjct:   855 ILLDDDLTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDV 914

Query:    56 YSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDC 115
             YS+G+LL+E F+ KKPTDE F G+ +L  +    LSG  T    +N A DE         
Sbjct:   915 YSFGILLLEMFSGKKPTDESFAGDYNLHSYTKSILSG-CTSSGGSN-AIDEG-------- 964

Query:   116 LSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151
             L  ++ + + C  E P  R+   +A  +L  I+ KF
Sbjct:   965 LRLVLQVGIKCSEEYPRDRMRTDEAVRELISIRSKF 1000

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010204 "defense response signaling pathway, resistance gene-independent" evidence=IMP

GO:0016045 "detection of bacterium" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0002764 "immune response-regulating signaling pathway" evidence=IMP

GO:0009626 "plant-type hypersensitive response" evidence=IMP

GO:0019199 "transmembrane receptor protein kinase activity" evidence=TAS

GO:0010359 "regulation of anion channel activity" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050776 "regulation of immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2085949 AT3G24240 [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 3.2e-19, P = 3.2e-19
 Identities = 57/151 (37%), Positives = 88/151 (58%)

Query:     1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
             IL+  D   +++DFG++KL+ +GD          + GY+APEYG    ++ K DVYSYGV
Sbjct:   925 ILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGV 984

Query:    61 LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANL-ARDEQSFFVKMDCLSSI 119
             +++E  T K+P D      + L DWV ++  G L +V+D+ L +R E     + D +  +
Sbjct:   985 VVLEVLTGKQPIDPTVPEGIHLVDWVRQN-RGSL-EVLDSTLRSRTE----AEADEMMQV 1038

Query:   120 MHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
             +  AL C   SPD+R  M D AA LK+IK++
Sbjct:  1039 LGTALLCVNSSPDERPTMKDVAAMLKEIKQE 1069

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010359 "regulation of anion channel activity" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

TAIR|locus:2170483 FLS2 "FLAGELLIN-SENSITIVE 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 8.9e-19, P = 8.9e-19
 Identities = 58/158 (36%), Positives = 90/158 (56%)

Query:     1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA---TIGYMAPEYGSEGIVSTKCDVYS 57
             ILLD D VAHVSDFG +++LG  +D  T   T A   TIGY+APE+     V+TK DV+S
Sbjct:  1003 ILLDSDRVAHVSDFGTARILGFREDGSTTASTSAFEGTIGYLAPEFAYMRKVTTKADVFS 1062

Query:    58 YGVLLMETFTRKKPT--DEMFIGEMSLRDWVNKSL-SGE--LTQVIDANLARDEQSFFVK 112
             +G+++ME  T+++PT  ++    +M+LR  V KS+ +G   + +V+D  L  D      +
Sbjct:  1063 FGIIMMELMTKQRPTSLNDEDSQDMTLRQLVEKSIGNGRKGMVRVLDMELG-DSIVSLKQ 1121

Query:   113 MDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
              + +   + L L C    P+ R  M +    L K++ K
Sbjct:  1122 EEAIEDFLKLCLFCTSSRPEDRPDMNEILTHLMKLRGK 1159

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS;IDA

GO:0016045 "detection of bacterium" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042742 "defense response to bacterium" evidence=RCA;IMP

GO:0052544 "defense response by callose deposition in cell wall" evidence=IMP

GO:0010359 "regulation of anion channel activity" evidence=IMP

GO:0016310 "phosphorylation" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0006898 "receptor-mediated endocytosis" evidence=IDA

TAIR|locus:2175703 AT5G39390 [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 59/156 (37%), Positives = 86/156 (55%)

Query:     1 ILLDEDMVAHVSDFGISKLLGDGDDSV-----TQTMTMATIGYMAPEYGSEGIVSTKCDV 55
             +LLD+D+ AHVSDFG+++LL + D+       +      TIGY APEYG     S + DV
Sbjct:   352 VLLDDDLTAHVSDFGLARLLYNFDEKTFLNQFSSAGVRGTIGYAAPEYGMGSKPSIQGDV 411

Query:    56 YSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDC 115
             YS+GVLL+E FT KKPTD  F G  +L  +  KS       V+  + +R  ++   +   
Sbjct:   412 YSFGVLLLEMFTGKKPTDNSFGGGYNLHGYT-KS-------VLSCSTSRGGRTMVDEW-- 461

Query:   116 LSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151
             L  ++ + + C  E P  R+ M +A  +L  IK KF
Sbjct:   462 LRLVLEVGIKCSEEYPRDRMGMAEAVRELVSIKSKF 497

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	159
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-16
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-16
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-16
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	9e-15
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-12
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	8e-12
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	8e-11
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-10
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-10
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-10
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-10
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-10
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	6e-10
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-09
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	5e-09
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-09
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	9e-09
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-08
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-08
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-08
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	3e-08
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-08
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	5e-08
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	5e-08
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	5e-08
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	6e-08
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	7e-08
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-07
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-07
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	2e-07
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	2e-07
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-07
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	3e-07
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-07
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	4e-07
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	5e-07
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	6e-07
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	7e-07
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	7e-07
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-06
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-06
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-06
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-06
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-06
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-06
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-06
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-06
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	3e-06
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	4e-06
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	5e-06
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	5e-06
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	5e-06
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	5e-06
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	7e-06
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	7e-06
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	8e-06
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	8e-06
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	9e-06
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	9e-06
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	1e-05
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	1e-05
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-05
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	1e-05
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-05
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	2e-05
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-05
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-05
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	3e-05
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-05
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	3e-05
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	3e-05
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	4e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-05
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	4e-05
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	4e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	4e-05
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	6e-05
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	6e-05
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	7e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	7e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	7e-05
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	7e-05
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	8e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	8e-05
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	8e-05
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	9e-05
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	9e-05
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	1e-04
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	1e-04
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	2e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	4e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	4e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	5e-04
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-04
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	6e-04
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	7e-04
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	8e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	0.001
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	0.001
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	0.001
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	0.002
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	0.002
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	0.002
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	0.002
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	0.003
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	0.003
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.003
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.003
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	0.003

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 73.7 bits (182), Expect = 1e-16
 Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 20/135 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ E++V  +SDFG+S+ + + D    +      I +MAPE   +G  ++K DV+S+GV
Sbjct: 133 CLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGV 192

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN-LARDEQSFFVKMDCLSSI 119
           LL E FT          GE       N+ +   L  + D   L R E       +C   +
Sbjct: 193 LLWEIFTL---------GEQPYPGMSNEEV---LELLEDGYRLPRPE-------NCPDEL 233

Query: 120 MHLALDCCMESPDQR 134
             L L C    P+ R
Sbjct: 234 YELMLQCWAYDPEDR 248

Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 72.6 bits (179), Expect = 3e-16
 Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 21/135 (15%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ E++V  +SDFG+S+ L D DD   +      I +MAPE   EG  ++K DV+S+GV
Sbjct: 133 CLVGENLVVKISDFGLSRDLYD-DDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGV 191

Query: 61  LLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           LL E FT  ++P   M     S  + +    +G           R  Q      +C   +
Sbjct: 192 LLWEIFTLGEQPYPGM-----SNEEVLEYLKNGY----------RLPQP----PNCPPEL 232

Query: 120 MHLALDCCMESPDQR 134
             L L C  E P+ R
Sbjct: 233 YDLMLQCWAEDPEDR 247

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 72.2 bits (178), Expect = 5e-16
 Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 21/135 (15%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ E++V  +SDFG+S+ L D DD          I +MAPE   EG  ++K DV+S+GV
Sbjct: 134 CLVGENLVVKISDFGLSRDLYD-DDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGV 192

Query: 61  LLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           LL E FT  ++P        MS  + +     G           R  +      +C   +
Sbjct: 193 LLWEIFTLGEEPYP-----GMSNAEVLEYLKKGY----------RLPKP----PNCPPEL 233

Query: 120 MHLALDCCMESPDQR 134
             L L C  E P+ R
Sbjct: 234 YKLMLQCWAEDPEDR 248

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 68.7 bits (169), Expect = 9e-15
 Identities = 30/68 (44%), Positives = 43/68 (63%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ ED+V  +SDFG+S+ + D D    +T     I +MAPE   +GI ++K DV+S+GV
Sbjct: 136 CLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGV 195

Query: 61  LLMETFTR 68
           LL E FT 
Sbjct: 196 LLWEIFTL 203

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 61.9 bits (151), Expect = 3e-12
 Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 5/73 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE--YGSEGIVSTKCDVYSY 58
           ILLDE+ V  ++DFG++K L     S   T    T  YMAPE   G  G    K DV+S 
Sbjct: 129 ILLDENGVVKIADFGLAKKLL-KSSSSLTTFV-GTPWYMAPEVLLGGNGY-GPKVDVWSL 185

Query: 59  GVLLMETFTRKKP 71
           GV+L E  T K P
Sbjct: 186 GVILYELLTGKPP 198

Length = 260

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 60.9 bits (148), Expect = 8e-12
 Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 5/67 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED+VA VSDFG++K     + S  Q      + + APE   E   STK DV+S+G+
Sbjct: 133 VLVSEDLVAKVSDFGLAK-----EASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGI 187

Query: 61  LLMETFT 67
           LL E ++
Sbjct: 188 LLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 58.1 bits (141), Expect = 8e-11
 Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 22/148 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL++ ++V  VSDFG+S+ L D + + T       I + APE  +    ++  DV+S+G+
Sbjct: 137 ILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGI 196

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVK--MDCLSS 118
           ++ E          M  GE    D  N+        VI A     E  + +   MDC S+
Sbjct: 197 VMWEV---------MSYGERPYWDMSNQ-------DVIKAV----EDGYRLPPPMDCPSA 236

Query: 119 IMHLALDCCMESPDQRIYMTDAAAKLKK 146
           +  L LDC  +  ++R   +   + L K
Sbjct: 237 LYQLMLDCWQKDRNERPTFSQIVSTLDK 264

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 57.7 bits (139), Expect = 1e-10
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ ED VA VSDFG++++   G D+     +   + + APE       S+K DV+SYGV
Sbjct: 131 ILVSEDGVAKVSDFGLARVGSMGVDN-----SKLPVKWTAPEALKHKKFSSKSDVWSYGV 185

Query: 61  LLMETFTR-KKPTDEMFIGEMS 81
           LL E F+  + P  +M + E+ 
Sbjct: 186 LLWEVFSYGRAPYPKMSLKEVK 207

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLDED    ++DFG+++ L  G+   T    + T  YMAPE           D++S GV
Sbjct: 128 ILLDEDGHVKLADFGLARQLDPGEKLTTF---VGTPEYMAPEVLLGKGYGKAVDIWSLGV 184

Query: 61  LLMETFTRKKP 71
           +L E  T K P
Sbjct: 185 ILYELLTGKPP 195

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 57.1 bits (138), Expect = 2e-10
 Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 22/135 (16%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ ED+V  V+DFG+++L+ +  D    +       + APE  S G  STK DV+S+G+
Sbjct: 135 ILVGEDLVCKVADFGLARLIKE--DVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGI 192

Query: 61  LLMETFTRKK-PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           LL E FT  + P   M               + E+   I A       +      C   I
Sbjct: 193 LLYEMFTYGQVPYPGM--------------NNHEVYDQITAGYRMPCPA-----KCPQEI 233

Query: 120 MHLALDCCMESPDQR 134
             + L+C    P+ R
Sbjct: 234 YKIMLECWAAEPEDR 248

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 56.7 bits (137), Expect = 3e-10
 Identities = 25/66 (37%), Positives = 41/66 (62%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ V  +SDFG+S+    G  +V+  +    I + APE  + G  +++ DV+SYG+L
Sbjct: 125 LVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGIL 184

Query: 62  LMETFT 67
           L ETF+
Sbjct: 185 LWETFS 190

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 56.4 bits (137), Expect = 3e-10
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 10/114 (8%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL+D D V  ++DFG +K LGD +     T ++  T  +MAPE           D++S G
Sbjct: 132 ILVDSDGVVKLADFGCAKRLGDIETG-EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLG 190

Query: 60  VLLMETFTRKKP-------TDEMF-IGEMSLRDWVNKSLSGELTQVIDANLARD 105
             ++E  T K P          ++ IG       + + LS E    +   L RD
Sbjct: 191 CTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRD 244

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 54.9 bits (133), Expect = 6e-10
 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 4/66 (6%)

Query: 1   ILLDED-MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE-YGSEGIVSTKCDVYSY 58
           ILLD D     ++DFG+SKLL      +   +   T  YMAPE    +G  S K D++S 
Sbjct: 123 ILLDSDNGKVKLADFGLSKLLTSDKSLLKTIV--GTPAYMAPEVLLGKGYYSEKSDIWSL 180

Query: 59  GVLLME 64
           GV+L E
Sbjct: 181 GVILYE 186

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 53.3 bits (129), Expect = 4e-09
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 9/82 (10%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVSTKCDVYSYG 59
           ILLD D    ++DFG++K L        +T T   T  Y+APE           D +S G
Sbjct: 124 ILLDADGHIKLTDFGLAKELSSEGS---RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLG 180

Query: 60  VLLMETFTRKKP-----TDEMF 76
           VLL E  T K P       E++
Sbjct: 181 VLLYEMLTGKPPFYAEDRKEIY 202

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 53.1 bits (127), Expect = 5e-09
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 5/67 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED VA VSDFG++K     + S TQ      + + APE   E   STK DV+S+G+
Sbjct: 133 VLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGI 187

Query: 61  LLMETFT 67
           LL E ++
Sbjct: 188 LLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 52.8 bits (127), Expect = 6e-09
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 5/135 (3%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVT-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ + +  +SDFG++K+L +  D    +    + I + APE       S+  DV+S+G
Sbjct: 140 ILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFG 199

Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           V L E FT   P+      E  LR          +T+++   L ++ +       C   +
Sbjct: 200 VTLYELFTYGDPSQSP-PAE-FLRMIGIAQGQMIVTRLL--ELLKEGERLPRPPSCPDEV 255

Query: 120 MHLALDCCMESPDQR 134
             L   C    P  R
Sbjct: 256 YDLMKLCWEAEPQDR 270

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 53.2 bits (126), Expect = 7e-09
 Identities = 35/162 (21%), Positives = 58/162 (35%), Gaps = 15/162 (9%)

Query: 1   ILLDED-MVAHVSDFGISKLLGDGDDSVTQTMTMA----TIGYMAPEY---GSEGIVSTK 52
           ILLD D  V  + DFG++KLL D   + +     +    T GYMAPE     S    S+ 
Sbjct: 132 ILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSS 191

Query: 53  CDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVK 112
            D++S G+ L E  T   P +         ++    S + ++   +         S    
Sbjct: 192 SDIWSLGITLYELLTGLPPFE-------GEKNSSATSQTLKIILELPTPSLASPLSPSNP 244

Query: 113 MDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD 154
                +   L      + P  R+  +   +       K  + 
Sbjct: 245 ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKES 286

Length = 384

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 52.5 bits (126), Expect = 9e-09
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 5/84 (5%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTM-ATIGYMAPE--YGSEGIVSTKCDVYS 57
           +L+D D +  +SDFGISK   D  D+  Q M+M  ++ +MAPE  +      S K D++S
Sbjct: 139 LLVDADGICKISDFGISKKSDDIYDND-QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWS 197

Query: 58  YGVLLMETFTRKKP-TDEMFIGEM 80
            G +++E F  ++P +DE  I  M
Sbjct: 198 LGCVVLEMFAGRRPWSDEEAIAAM 221

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVT-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+S+ LG G D     T     + + APE  + G  S+K DV+SYG
Sbjct: 126 VLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYG 185

Query: 60  VLLMETFTR-KKPTDEM 75
           V L E F+   KP  EM
Sbjct: 186 VTLWEAFSYGAKPYGEM 202

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 24/148 (16%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+  D+V  + DFG+S+ +   D       TM  I +M PE       +T+ DV+S+GV+
Sbjct: 154 LVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVV 213

Query: 62  LMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKMDCLSS 118
           L E FT  K+P             W   S + E+ + I     L R          C S 
Sbjct: 214 LWEIFTYGKQP-------------WYGLS-NEEVIECITQGRLLQRPR-------TCPSE 252

Query: 119 IMHLALDCCMESPDQRIYMTDAAAKLKK 146
           +  + L C    P QRI + D   +L+K
Sbjct: 253 VYDIMLGCWKRDPQQRINIKDIHERLQK 280

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 51.4 bits (123), Expect = 2e-08
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 25/152 (16%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA---TIGYMAPEYGSEGIVSTKCDVYS 57
           IL++ ++V  VSDFG+S+ L D     T T ++     I + APE  +    ++  DV+S
Sbjct: 137 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWS 196

Query: 58  YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDC 115
           YG+++ E          M  GE    D  N+        VI+A     EQ + +   MDC
Sbjct: 197 YGIVMWEV---------MSYGERPYWDMSNQD-------VINA----IEQDYRLPPPMDC 236

Query: 116 LSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147
            +++  L LDC  +  + R       + L K+
Sbjct: 237 PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 51.4 bits (123), Expect = 3e-08
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)

Query: 38  YMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSG-ELTQ 96
           Y+APE      ++ K D+Y +G++L+E  T K P D  F    S+ +W     S   L  
Sbjct: 844 YVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDM 903

Query: 97  VIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQR 134
            ID ++  D     V  + +  +M+LAL C    P  R
Sbjct: 904 WIDPSIRGDVS---VNQNEIVEVMNLALHCTATDPTAR 938

Length = 968

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 37/136 (27%), Positives = 52/136 (38%), Gaps = 20/136 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMAT-IGYMAPEYGSEGIVSTKCDVYSYG 59
           ILL  D    + DFG+ + L   +D       +     + APE       S   DV+ +G
Sbjct: 128 ILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFG 187

Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSG-ELTQVIDANLARDEQSFFVKMDCLSS 118
           V L E FT          GE     W    LSG ++ + ID    R E+       C   
Sbjct: 188 VTLWEMFT---------YGEEP---WA--GLSGSQILKKIDKEGERLERP----EACPQD 229

Query: 119 IMHLALDCCMESPDQR 134
           I ++ L C   +P  R
Sbjct: 230 IYNVMLQCWAHNPADR 245

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 50.5 bits (121), Expect = 5e-08
 Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 10/152 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLL-GDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 139 ILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFG 198

Query: 60  VLLMETFT---RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCL 116
           V+L E FT   +       F+  M           G++       L ++         C 
Sbjct: 199 VVLYELFTYSDKSCSPPAEFMRMMG------NDKQGQMIVYHLIELLKNNGRLPAPPGCP 252

Query: 117 SSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148
           + I  +  +C    P QR   ++ A +++ I+
Sbjct: 253 AEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 50.2 bits (121), Expect = 5e-08
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 30/124 (24%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE------YGSEGIVSTKCD 54
           I L  + +  + DFGISK+L      + +T+   T  Y++PE      Y      + K D
Sbjct: 134 IFLTSNGLVKLGDFGISKVL-SSTVDLAKTVV-GTPYYLSPELCQNKPY------NYKSD 185

Query: 55  VYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSG-----------ELTQVIDANLA 103
           ++S G +L E  T K P    F GE +L +   K L G           EL  ++ + L 
Sbjct: 186 IWSLGCVLYELCTLKHP----FEGE-NLLELALKILKGQYPPIPSQYSSELRNLVSSLLQ 240

Query: 104 RDEQ 107
           +D +
Sbjct: 241 KDPE 244

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 50.4 bits (120), Expect = 5e-08
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 133 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 191

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKM--DCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 192 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 231

Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 232 LHDLMCQCWRKEPEER 247

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 50.0 bits (119), Expect = 6e-08
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E  V  +SDFG+S+   DG  + T  M    + + APE  + G  S++ DV+S+G+L
Sbjct: 126 LVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGIL 185

Query: 62  LMETFT 67
           L E F+
Sbjct: 186 LWEAFS 191

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 49.8 bits (119), Expect = 7e-08
 Identities = 24/67 (35%), Positives = 40/67 (59%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E+ V  + DFG+++ +    D V +      + +MAPE   + + +T+ DV+S+GV
Sbjct: 204 ILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGV 263

Query: 61  LLMETFT 67
           LL E F+
Sbjct: 264 LLWEIFS 270

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  ++DFG+++L+ D D+   +      I + APE  + G  + K DV+S+G+
Sbjct: 134 ILVGENLVCKIADFGLARLIED-DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGI 192

Query: 61  LLMETFT 67
           LL E  T
Sbjct: 193 LLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 49.0 bits (117), Expect = 1e-07
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 11  VSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RK 69
           ++DFG++KLL   +           I +MA E     I + K DV+SYGV + E  T   
Sbjct: 150 ITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGA 209

Query: 70  KPTD 73
           KP +
Sbjct: 210 KPYE 213

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 5/72 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVSTKCDVYSYG 59
           ILLDE    H++DF I+  +       T T + + T GYMAPE       S   D +S G
Sbjct: 131 ILLDEQGHVHITDFNIATKVTPD----TLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLG 186

Query: 60  VLLMETFTRKKP 71
           V   E    K+P
Sbjct: 187 VTAYECLRGKRP 198

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 48.4 bits (115), Expect = 2e-07
 Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 21/149 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIG--YMAPEYGSEGIVSTKCDVYSY 58
           IL++ ++   VSDFG+S++L D D   T T +   I   + APE  +    ++  DV+S+
Sbjct: 138 ILVNSNLECKVSDFGLSRVLED-DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSF 196

Query: 59  GVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSS 118
           G+++ E          M  GE    D  N     E+ + I+     D       MDC S+
Sbjct: 197 GIVMWEV---------MSFGERPYWDMSNH----EVMKAIN-----DGFRLPAPMDCPSA 238

Query: 119 IMHLALDCCMESPDQRIYMTDAAAKLKKI 147
           +  L L C  +   +R    D    L K+
Sbjct: 239 VYQLMLQCWQQDRARRPRFVDIVNLLDKL 267

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 48.4 bits (115), Expect = 2e-07
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ V  VSDFG+++ + D D   + T T   + + +PE  S    S+K DV+S+GVL
Sbjct: 132 LVGENQVVKVSDFGMTRFVLD-DQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVL 190

Query: 62  LMETFTRKK 70
           + E F+  K
Sbjct: 191 MWEVFSEGK 199

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 48.1 bits (114), Expect = 3e-07
 Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 18/145 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E +   +SD G+S+ +   D    Q  ++  I +M PE    G  S+  D++S+GV
Sbjct: 155 ILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGV 214

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           +L E F+          G      + N+       +VI+  + R  Q      DC   + 
Sbjct: 215 VLWEIFS---------FGLQPYYGFSNQ-------EVIE--MVRKRQLLPCSEDCPPRMY 256

Query: 121 HLALDCCMESPDQRIYMTDAAAKLK 145
            L  +C  E P +R    D   +L+
Sbjct: 257 SLMTECWQEGPSRRPRFKDIHTRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 47.9 bits (114), Expect = 4e-07
 Identities = 19/67 (28%), Positives = 37/67 (55%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LL    +  + DFG+++ + +  + V +      + +MAPE     + + + DV+SYG+
Sbjct: 172 VLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 231

Query: 61  LLMETFT 67
           LL E F+
Sbjct: 232 LLWEIFS 238

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 47.7 bits (113), Expect = 4e-07
 Identities = 24/67 (35%), Positives = 40/67 (59%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E+ V  + DFG+++ +    D V +      + +MAPE   + + +T+ DV+S+GV
Sbjct: 205 ILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGV 264

Query: 61  LLMETFT 67
           LL E F+
Sbjct: 265 LLWEIFS 271

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 47.6 bits (113), Expect = 5e-07
 Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 21/149 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++  T       I + APE  +    ++  DV+SYG
Sbjct: 137 ILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYG 196

Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDE-QSFFVKMDCLSS 118
           +++ E          M  GE    +  N+          D   A +E       MDC ++
Sbjct: 197 IVMWEV---------MSYGERPYWEMSNQ----------DVIKAIEEGYRLPAPMDCPAA 237

Query: 119 IMHLALDCCMESPDQRIYMTDAAAKLKKI 147
           +  L LDC  +  ++R       + L K+
Sbjct: 238 LHQLMLDCWQKDRNERPKFEQIVSILDKL 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 47.0 bits (111), Expect = 6e-07
 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ +++V  ++DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 133 ILVGDNLVCKIADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 191

Query: 61  LLMETFTRKK 70
           LL E  T+ +
Sbjct: 192 LLTELVTKGR 201

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 47.6 bits (113), Expect = 7e-07
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 7/93 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDG-DDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           ILL  + +  + DFG SK+      D V +T    T  Y+APE       S K D++S G
Sbjct: 174 ILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFC-GTPYYVAPEIWRRKPYSKKADMFSLG 232

Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSG 92
           VLL E  T K+P D    GE ++ + ++K+L+G
Sbjct: 233 VLLYELLTLKRPFD----GE-NMEEVMHKTLAG 260

Length = 496

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 47.3 bits (112), Expect = 7e-07
 Identities = 23/67 (34%), Positives = 39/67 (58%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E     +SDFG+S+ + + D  V ++     + +MA E   + I +T+ DV+S+GV
Sbjct: 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGV 217

Query: 61  LLMETFT 67
           LL E  T
Sbjct: 218 LLWEIVT 224

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 22/60 (36%), Positives = 35/60 (58%)

Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA ++DFG+++ +            M  I +M PE   +GI ++K DV+S+GVLL E F+
Sbjct: 157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 16/116 (13%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIG---YMAPEYGSEGIVSTKCDVYS 57
           ILL  + +  + D GISK+L        + M    IG   YMAPE       S K D++S
Sbjct: 134 ILLVANDLVKIGDLGISKVL-------KKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWS 186

Query: 58  YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKM 113
            G LL E  T   P    F    S++D   K   G+    I    ++D Q+F   M
Sbjct: 187 LGCLLYEMATFAPP----FEAR-SMQDLRYKVQRGKYPP-IPPIYSQDLQNFIRSM 236

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ ED V  VSDFG+++ + D D   +   T   + +  PE       S+K DV+S+GVL
Sbjct: 132 LVGEDNVVKVSDFGLARYVLD-DQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVL 190

Query: 62  LMETFTRKK 70
           + E F+  K
Sbjct: 191 MWEVFSEGK 199

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           I LD +    + DFG++K+LG  D S  +T  + T  YM+PE  +      K D++S G 
Sbjct: 141 IFLDANNNVKLGDFGLAKILGH-DSSFAKTY-VGTPYYMSPEQLNHMSYDEKSDIWSLGC 198

Query: 61  LLMETFTRKKP 71
           L+ E      P
Sbjct: 199 LIYELCALSPP 209

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +V  ++DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 133 ILVGDGLVCKIADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 191

Query: 61  LLMETFTRKK 70
           LL E  T+ +
Sbjct: 192 LLTELVTKGR 201

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ V  +SDFG+S+   DG  S +  +    I + APE  + G  S++ DV+SYG+L
Sbjct: 125 LVGENNVLKISDFGMSRQEDDGIYS-SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGIL 183

Query: 62  LMETFT 67
           L ETF+
Sbjct: 184 LWETFS 189

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVSTKCDVYSYG 59
           ILL  D    + DFG+S  L D         TM  T  +MAPE  +      K D++S G
Sbjct: 129 ILLTSDGEVKLIDFGLSAQLSDT----KARNTMVGTPYWMAPEVINGKPYDYKADIWSLG 184

Query: 60  VLLMETFTRKKP 71
           +  +E    K P
Sbjct: 185 ITAIELAEGKPP 196

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 8/111 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           + LD      + D G++KLL D + +   T+ + T  Y++PE   +   + K DV++ GV
Sbjct: 132 LFLDAYDNVKIGDLGVAKLLSD-NTNFANTI-VGTPYYLSPELCEDKPYNEKSDVWALGV 189

Query: 61  LLMETFTRKKPTDEMFIGEMSLR------DWVNKSLSGELTQVIDANLARD 105
           +L E  T K P D    G + L+        V++  S +L Q+ID  L +D
Sbjct: 190 VLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKD 240

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 16/78 (20%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT-MATIGYMAPE------YGSEGIVSTKC 53
           +L++      ++DFGISK+L +  D   Q  T + T+ YM+PE      Y      S   
Sbjct: 131 LLINSKGEVKIADFGISKVLENTLD---QCNTFVGTVTYMSPERIQGESY------SYAA 181

Query: 54  DVYSYGVLLMETFTRKKP 71
           D++S G+ L+E    K P
Sbjct: 182 DIWSLGLTLLECALGKFP 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 45.4 bits (107), Expect = 3e-06
 Identities = 23/67 (34%), Positives = 39/67 (58%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E+ V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 210 ILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 269

Query: 61  LLMETFT 67
           LL E F+
Sbjct: 270 LLWEIFS 276

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 44.8 bits (106), Expect = 4e-06
 Identities = 39/139 (28%), Positives = 55/139 (39%), Gaps = 26/139 (18%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEY--GSEGIVSTKCDVYSY 58
           ILLD +    ++DFG+SK     ++    +    TI YMAPE   G  G      D +S 
Sbjct: 136 ILLDSEGHVVLTDFGLSKEFLAEEEERAYSFC-GTIEYMAPEVIRGGSGGHDKAVDWWSL 194

Query: 59  GVLLMETFTRKKP-------------------TDEMFIGEMS--LRDWVNKSLSGELTQV 97
           GVL  E  T   P                   +   F   MS   RD++ K L  +  + 
Sbjct: 195 GVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKR 254

Query: 98  IDANLARD--EQSFFVKMD 114
           + AN A +     FF  +D
Sbjct: 255 LGANGADEIKNHPFFQGID 273

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 45.0 bits (106), Expect = 5e-06
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LL +  +  + DFG+++ +    + V++  T   + +MAPE   + + +T  DV+SYG+
Sbjct: 268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGI 327

Query: 61  LLMETFT 67
           LL E F+
Sbjct: 328 LLWEIFS 334

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 17/115 (14%)

Query: 32  TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLS 91
            +  + ++APE   E   STK DV+S+GVL+ E FT      E+    +S  + +N+  +
Sbjct: 178 ALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFT----QGELPFYGLSDEEVLNRLQA 233

Query: 92  GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK 146
           G+L   +                C S +  L   C   +P  R   ++  + L +
Sbjct: 234 GKLELPVPEG-------------CPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 32/141 (22%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 222

Query: 61  LLMETFTRKK------PTDEMFIGEMSLRDWVNKSL-SGELTQVIDANLARDEQSFFVKM 113
           LL E FT         P +E+F           K L  G           R E+      
Sbjct: 223 LLWEIFTLGGSPYPGIPVEELF-----------KLLKEGY----------RMEKP----Q 257

Query: 114 DCLSSIMHLALDCCMESPDQR 134
           +C   + HL  DC  E P QR
Sbjct: 258 NCTQELYHLMRDCWHEVPSQR 278

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 44.4 bits (105), Expect = 5e-06
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTM-ATIGYMAPEYGSEGIVSTKCDVYSYG 59
           ILLDE+    ++DFG+SK   +  D   +  +   T+ YMAPE  +    +   D +S+G
Sbjct: 129 ILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFG 185

Query: 60  VLLMETFTRKKP 71
           VL+ E  T   P
Sbjct: 186 VLMFEMLTGSLP 197

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 44.2 bits (104), Expect = 7e-06
 Identities = 23/69 (33%), Positives = 37/69 (53%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ + +V  + DFG+S+ +   D       TM  I +M PE       +T+ D++S+GV+
Sbjct: 154 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVV 213

Query: 62  LMETFTRKK 70
           L E FT  K
Sbjct: 214 LWEIFTYGK 222

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 44.2 bits (105), Expect = 7e-06
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL  +D V  ++DFG++  L D   S      + T  +MAPE       ST  D++S G 
Sbjct: 130 ILTTKDGVVKLADFGVATKLND--VSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGC 187

Query: 61  LLMETFTRKKP 71
            ++E  T   P
Sbjct: 188 TVIELLTGNPP 198

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 44.0 bits (104), Expect = 8e-06
 Identities = 22/67 (32%), Positives = 39/67 (58%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           +L EDM   V+DFG+SK +  GD      +    + ++A E  ++ + ++K DV+++GV 
Sbjct: 145 MLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT 204

Query: 62  LMETFTR 68
           + E  TR
Sbjct: 205 MWEIATR 211

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 43.9 bits (103), Expect = 8e-06
 Identities = 23/67 (34%), Positives = 41/67 (61%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           +L+E+M   V+DFG+SK + +GD      +    + ++A E  ++ + +TK DV+S+GV 
Sbjct: 144 MLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVT 203

Query: 62  LMETFTR 68
           + E  TR
Sbjct: 204 MWEIATR 210

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 43.9 bits (103), Expect = 9e-06
 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 224

Query: 61  LLMETFTRKK------PTDEMF 76
           LL E FT         P +E+F
Sbjct: 225 LLWEIFTLGGSPYPGIPVEELF 246

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 43.7 bits (103), Expect = 9e-06
 Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E +   ++DFG+++L+ D ++   +      I + APE  + G  + K DV+S+G+
Sbjct: 133 ILVSETLCCKIADFGLARLIED-NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 191

Query: 61  LLMETFT 67
           LL E  T
Sbjct: 192 LLTEIVT 198

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 43.8 bits (103), Expect = 1e-05
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GV
Sbjct: 171 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 230

Query: 61  LLMETFTRKK------PTDEMF 76
           LL E FT         P +E+F
Sbjct: 231 LLWEIFTLGGSPYPGVPVEELF 252

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 43.8 bits (103), Expect = 1e-05
 Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 5/65 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +L+ E++ + ++DFG+S+    G++  V +TM    + +MA E  +  + +TK DV+S+G
Sbjct: 150 VLVGENLASKIADFGLSR----GEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFG 205

Query: 60  VLLME 64
           VLL E
Sbjct: 206 VLLWE 210

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 43.8 bits (103), Expect = 1e-05
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 3/64 (4%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E+ VA ++DFG+S+     +  V +TM    + +MA E  +  + +T  DV+SYGV
Sbjct: 155 ILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 211

Query: 61  LLME 64
           LL E
Sbjct: 212 LLWE 215

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 43.7 bits (103), Expect = 1e-05
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+D+     VSDFG+S+ + D D+  +   +   + +  PE       S+K DV+++GVL
Sbjct: 132 LVDDQGCVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVL 190

Query: 62  LMETFTRKKPTDEMF 76
           + E ++  K   E F
Sbjct: 191 MWEVYSLGKMPYERF 205

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL       + DFG+S   G+  +S+  T T  T  YMAPE       S   DV+S G+
Sbjct: 136 ILLTRKGQVKLCDFGVS---GELVNSLAGTFT-GTSFYMAPERIQGKPYSITSDVWSLGL 191

Query: 61  LLME 64
            L+E
Sbjct: 192 TLLE 195

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 21/67 (31%), Positives = 39/67 (58%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           +L+E+M   V+DFG+SK +  GD       +   + ++A E  ++ + +T  DV+++GV 
Sbjct: 145 MLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVT 204

Query: 62  LMETFTR 68
           + E  TR
Sbjct: 205 MWEIMTR 211

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 21/67 (31%), Positives = 39/67 (58%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ E +   +SDFG+S+ +   D    Q+ ++  + +M PE    G  +T+ D++S+GV
Sbjct: 155 CLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGV 214

Query: 61  LLMETFT 67
           +L E F+
Sbjct: 215 VLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI--VSTKCDVYSYGVLLMET 65
           V  +SDFG SK L  G +  T+T T  T+ YMAPE   +G        D++S G  ++E 
Sbjct: 147 VVKISDFGTSKRLA-GINPCTETFT-GTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEM 204

Query: 66  FTRKKPTDEM 75
            T K P  E+
Sbjct: 205 ATGKPPFIEL 214

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMAT--IGYMAPEYGSEGIVSTKCDVYSY 58
           +LL     A +SDFG+SK LG  DDS  +  +     + + APE  +    S++ DV+SY
Sbjct: 126 VLLVNQHYAKISDFGLSKALG-ADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSY 184

Query: 59  GVLLMETFTR-KKPTDEM 75
           G+ + E F+  +KP  +M
Sbjct: 185 GITMWEAFSYGQKPYKKM 202

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 33/141 (23%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ +  V+DFG+++++ + D    +      I + APE       S K DV+S+G+
Sbjct: 134 VLVGENNICKVADFGLARVIKE-DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGI 192

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDC----- 115
           LL E  T          G M      N     E+ Q +D            +M C     
Sbjct: 193 LLTEIVT---------YGRMPYPGMTNA----EVLQQVDQGY---------RMPCPPGCP 230

Query: 116 --LSSIMHLALDCCMESPDQR 134
             L  IM   LDC  E PD R
Sbjct: 231 KELYDIM---LDCWKEDPDDR 248

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ ++    ++DFG+S+ L   D    Q      I +MA E    G  +TK DV+++GV 
Sbjct: 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVT 221

Query: 62  LMETFT--RKKPTDEM 75
           L E  T  R++P + +
Sbjct: 222 LWEILTLCREQPYEHL 237

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL+E+  A ++DFG+S  L D       T+ + T  +MAPE   E   + K D++S G+
Sbjct: 130 ILLNEEGQAKLADFGVSGQLTDTMAK-RNTV-IGTPFWMAPEVIQEIGYNNKADIWSLGI 187

Query: 61  LLMETFTRKKP 71
             +E    K P
Sbjct: 188 TAIEMAEGKPP 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 42.4 bits (99), Expect = 3e-05
 Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 5/65 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL+ E+ VA ++DFG+S+    G +  V +TM    + +MA E  +  + +T  DV+SYG
Sbjct: 143 ILVGENYVAKIADFGLSR----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 198

Query: 60  VLLME 64
           VLL E
Sbjct: 199 VLLWE 203

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 18/89 (20%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIG------------------YMAPE 42
           ILLD+DM   ++DFG +K+L       +       I                   Y++PE
Sbjct: 133 ILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPE 192

Query: 43  YGSEGIVSTKCDVYSYGVLLMETFTRKKP 71
             +E       D+++ G ++ +  T K P
Sbjct: 193 LLNEKPAGKSSDLWALGCIIYQMLTGKPP 221

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 42.1 bits (99), Expect = 3e-05
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMAT--IGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D +       T A   + +MA E       +TK DV+S+G
Sbjct: 130 MLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFG 189

Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 190 VLLWELMTRGAP 201

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 42.3 bits (99), Expect = 3e-05
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK LG D +    +T     + + APE  +    S+K DV+S+G
Sbjct: 126 VLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFG 185

Query: 60  VLLMETFTR-KKPTDEMFIGEMS 81
           VL+ E F+  +KP   M   E++
Sbjct: 186 VLMWEAFSYGQKPYKGMKGNEVT 208

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 42.2 bits (99), Expect = 4e-05
 Identities = 22/67 (32%), Positives = 34/67 (50%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL  D +  ++DFG++ LL   D     +     I +MA E    G  + + DV+SYGV
Sbjct: 140 ILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGV 199

Query: 61  LLMETFT 67
            + E  +
Sbjct: 200 TVWEMMS 206

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 21/66 (31%), Positives = 39/66 (59%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++ ED+   + DFG+++ + + D        +  + +MAPE   +G+ +TK DV+S+GV+
Sbjct: 151 MVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVV 210

Query: 62  LMETFT 67
           L E  T
Sbjct: 211 LWEMAT 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 20/67 (29%), Positives = 39/67 (58%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E  +  + DFG+++ +    + +++  T   + +MAPE     + +T  DV+S+G+
Sbjct: 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGI 329

Query: 61  LLMETFT 67
           LL E FT
Sbjct: 330 LLWEIFT 336

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ + D D     +     + +MAPE   + + + + DV+S+G+
Sbjct: 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGI 224

Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 225 LMWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 41.8 bits (98), Expect = 4e-05
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 6/76 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT-----MATIGYMAPEYGSEGIVSTKCDV 55
           IL+D      +SDFGISK L + +   T+T         ++ +MAPE   +   + K D+
Sbjct: 137 ILVDNKGGIKISDFGISKKL-EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADI 195

Query: 56  YSYGVLLMETFTRKKP 71
           +S G L++E  T K P
Sbjct: 196 WSLGCLVVEMLTGKHP 211

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 41.5 bits (97), Expect = 6e-05
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+       ++DFG+S+ L  GD    Q   +  I +MA E    G  +T  DV+++GV 
Sbjct: 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVT 220

Query: 62  LMETFT--RKKP----TDEMFI 77
           L E FT  +++P    +DE  I
Sbjct: 221 LWEMFTLCKEQPYSLLSDEQVI 242

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 41.4 bits (97), Expect = 6e-05
 Identities = 20/67 (29%), Positives = 37/67 (55%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL    +  + DFG+++ + +  + V +      + +MAPE     + + + DV+SYG+
Sbjct: 245 ILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 304

Query: 61  LLMETFT 67
           LL E F+
Sbjct: 305 LLWEIFS 311

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 41.4 bits (97), Expect = 7e-05
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+    V  VSDFG+++ + D D+  + +     + +  PE  +    S+K DV+S+GVL
Sbjct: 132 LVSSTGVVKVSDFGMTRYVLD-DEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVL 190

Query: 62  LMETFTRKK 70
           + E FT  K
Sbjct: 191 MWEVFTEGK 199

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 41.2 bits (97), Expect = 7e-05
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM--TMATIGYMAPEYGSEGIVSTK---CDV 55
           I LD + V  + DFG +  L +   ++ + +     T  YMAPE  + G         D+
Sbjct: 130 IFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADI 189

Query: 56  YSYGVLLMETFTRKKPTDEM 75
           +S G +++E  T K+P  E+
Sbjct: 190 WSLGCVVLEMATGKRPWSEL 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 41.2 bits (96), Expect = 7e-05
 Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+   +V  ++DFG+++++ D ++   +      I + APE  + G  + K DV+S+G+
Sbjct: 133 ILVSASLVCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGI 191

Query: 61  LLMETFT 67
           LLME  T
Sbjct: 192 LLMEIVT 198

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 41.2 bits (96), Expect = 7e-05
 Identities = 22/82 (26%), Positives = 42/82 (51%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV+
Sbjct: 151 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 210

Query: 62  LMETFTRKKPTDEMFIGEMSLR 83
           L E  T  +   +    E  LR
Sbjct: 211 LWEIATLAEQPYQGMSNEQVLR 232

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 41.1 bits (96), Expect = 8e-05
 Identities = 23/69 (33%), Positives = 37/69 (53%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+  +++  + DFG+S+ +   D       TM  I +M PE       +T+ DV+S+GV+
Sbjct: 155 LVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI 214

Query: 62  LMETFTRKK 70
           L E FT  K
Sbjct: 215 LWEIFTYGK 223

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 41.0 bits (96), Expect = 8e-05
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 136 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 194

Query: 62  LMETFT 67
           L E  T
Sbjct: 195 LWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 41.4 bits (97), Expect = 8e-05
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 9   AHVSDFGISKLLGDGDDSVTQTMTMAT--IG---YMAPEYGSEGIVSTKCDVYSYGVLLM 63
           A V DFGI  LL    D+   T+T  T  +G   Y APE      V+   D+Y++G++ +
Sbjct: 121 AKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFL 180

Query: 64  ETFT 67
           E  T
Sbjct: 181 ECLT 184

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 40.8 bits (95), Expect = 9e-05
 Identities = 24/69 (34%), Positives = 37/69 (53%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+++  + DFG+S+ +   D       TM  I +M PE       +T+ DV+S GV+
Sbjct: 152 LVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 211

Query: 62  LMETFTRKK 70
           L E FT  K
Sbjct: 212 LWEIFTYGK 220

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 40.8 bits (95), Expect = 9e-05
 Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 227

Query: 61  LLMETFTRKK------PTDEMF 76
           L+ E FT         P +E+F
Sbjct: 228 LMWEIFTLGGSPYPGIPVEELF 249

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LL +  VA + DFG+++ + +  + V +      + +MAPE   + + + + DV+SYG+
Sbjct: 243 VLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 302

Query: 61  LLMETFT 67
           LL E F+
Sbjct: 303 LLWEIFS 309

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E ++  ++DFG+++++ D ++   +      I + APE  + G  + K DV+S+G+
Sbjct: 134 VLVSESLMCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGI 192

Query: 61  LLMETFTRKK 70
           LL E  T  K
Sbjct: 193 LLYEIVTYGK 202

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLM 63
           D D V  + DFG+++ +   D    +   +  + +MAPE   +G  +T+ DV+S+GVL+ 
Sbjct: 145 DADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMW 204

Query: 64  ETFT 67
           E  T
Sbjct: 205 EILT 208

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LLD+     +SD G++  L  G           T GYMAPE     +     D ++ G 
Sbjct: 126 VLLDDHGNVRISDLGLAVELKGGK---KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGC 182

Query: 61  LLMETFT-------RKKPTDEMFIGEMSLRDWVN--KSLSGELTQVIDANLARD 105
            L E          RK+  ++  +   +L   V      S E   + +A L +D
Sbjct: 183 TLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKD 236

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 18/145 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ + +   +SD G+ + +   D       ++  I +M+PE    G  S   D++SYGV
Sbjct: 155 VLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGV 214

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           +L E F+              L+ +   S + ++ ++I     R+ Q      DC + + 
Sbjct: 215 VLWEVFS------------YGLQPYCGYS-NQDVIEMI-----RNRQVLPCPDDCPAWVY 256

Query: 121 HLALDCCMESPDQRIYMTDAAAKLK 145
            L L+C  E P +R    D  ++L+
Sbjct: 257 TLMLECWNEFPSRRPRFKDIHSRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+MV  ++DFG+S+ +   D           I +M PE       +T+ DV++YGV+
Sbjct: 162 LVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVV 221

Query: 62  LMETFT 67
           L E F+
Sbjct: 222 LWEIFS 227

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 39.1 bits (91), Expect = 4e-04
 Identities = 34/154 (22%), Positives = 55/154 (35%), Gaps = 13/154 (8%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDD--SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSY 58
           +LLD D +  + DFG++K + +G +   V +        Y A E   E   S   DV+S+
Sbjct: 138 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-AVECLKENKFSYASDVWSF 196

Query: 59  GVLLMETFTRKKPTD---EMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDC 115
           GV L E  T         + F   +  +        G++T V    L           +C
Sbjct: 197 GVTLYELLTHCDSKQSPPKKFEEMIGPK-------QGQMTVVRLIELLERGMRLPCPKNC 249

Query: 116 LSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
              +  L  +C       R         LK++  
Sbjct: 250 PQEVYILMKNCWETEAKFRPTFRSLIPILKEMHH 283

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 20/103 (19%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE----YGSEGIVSTKCDVY 56
           ILLD +    + DFGIS  L    DS+ +T       YMAPE       +G    + DV+
Sbjct: 139 ILLDRNGNIKLCDFGISGQL---VDSIAKTRDAGCRPYMAPERIDPSARDG-YDVRSDVW 194

Query: 57  SYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVID 99
           S G+ L E  T K P  +          W   S+  +LTQV+ 
Sbjct: 195 SLGITLYEVATGKFPYPK----------W--NSVFDQLTQVVK 225

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 39.0 bits (91), Expect = 5e-04
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 13  DFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPT 72
           DFG+S   G+  +S+  T  + T  YM+PE    G  + K DV+S G+ ++E    K P 
Sbjct: 147 DFGVS---GELINSIADTF-VGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPF 202

Query: 73  DE 74
             
Sbjct: 203 AF 204

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 38.7 bits (90), Expect = 5e-04
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 1   ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           ILLD+  MV  + DFGISK+L     + T    + T  Y++PE       + K D+++ G
Sbjct: 132 ILLDKHKMVVKIGDFGISKILSSKSKAYT---VVGTPCYISPELCEGKPYNQKSDIWALG 188

Query: 60  VLLMETFTRKKPTD 73
            +L E  + K+  +
Sbjct: 189 CVLYELASLKRAFE 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 38.2 bits (89), Expect = 6e-04
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           I L +  +  + DFGISK+LG  + S+ +T+ + T  YM+PE       + K D+++ G 
Sbjct: 132 IFLTKAGLIKLGDFGISKILGS-EYSMAETV-VGTPYYMSPELCQGVKYNFKSDIWALGC 189

Query: 61  LLMETFTRKK 70
           +L E  T K+
Sbjct: 190 VLYELLTLKR 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 38.1 bits (89), Expect = 7e-04
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT--MATIGYMAPEYGSEGIVST-KCDVYS 57
           ILL ED    ++DFG+S  L DG D   +     + T  +MAPE   +      K D++S
Sbjct: 133 ILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWS 192

Query: 58  YGVLLMETFTRKKP 71
           +G+  +E  T   P
Sbjct: 193 FGITAIELATGAAP 206

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 38.2 bits (89), Expect = 8e-04
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 7/110 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LLD+D    ++DFG+ K   +G+     +    T  Y+APE       +   D +S+GV
Sbjct: 127 VLLDKDGHIKIADFGMCKENMNGEG--KASTFCGTPDYIAPEILKGQKYNESVDWWSFGV 184

Query: 61  LLMETFTRKKP-----TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
           LL E    + P      DE+F   ++ R    + +S E    +     RD
Sbjct: 185 LLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERD 234

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 37.6 bits (87), Expect = 0.001
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 7   MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETF 66
           MVA + DFGI++ L D  + +  T  + T  Y++PE       + K D++S G +L E  
Sbjct: 139 MVAKLGDFGIARQLNDSME-LAYT-CVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELC 196

Query: 67  TRKKP 71
           T K P
Sbjct: 197 TLKHP 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 37.6 bits (87), Expect = 0.001
 Identities = 17/66 (25%), Positives = 36/66 (54%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++  D    + DFG+++ + + D        +  + +MAPE   +G+ +T  D++S+GV+
Sbjct: 151 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 210

Query: 62  LMETFT 67
           L E  +
Sbjct: 211 LWEITS 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)

Query: 13  DFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKP 71
           DFG+S  L    +S+ +T    T  YMAPE       S K D++S G+ L+E  T + P
Sbjct: 144 DFGVSGQL---VNSLAKTFV-GTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFP 198

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 6/82 (7%)

Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E++   ++DFG+S+ L  GD    Q   +  I +MA E    G  +T  DV+++GV 
Sbjct: 170 LVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVT 229

Query: 62  LMETFT--RKKP----TDEMFI 77
           L E     +++P    TDE  I
Sbjct: 230 LWEILMLCKEQPYGELTDEQVI 251

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 6/73 (8%)

Query: 11  VSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--R 68
           ++DFG+S+ L  GD    Q   +  I +M+ E    G  +T  DV+++GV L E  T  +
Sbjct: 171 IADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCK 230

Query: 69  KKP----TDEMFI 77
           ++P    +DE  I
Sbjct: 231 EQPYSQLSDEQVI 243

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 36.8 bits (86), Expect = 0.002
 Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 15/77 (19%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTM-ATIGYMAPEYGSEGIVSTK-----CD 54
           +LLD +    + DFG +K L  G     +T T   T  Y+APE     I+  K      D
Sbjct: 124 LLLDSNGYVKLVDFGFAKKLKSG----QKTWTFCGTPEYVAPE-----IILNKGYDFSVD 174

Query: 55  VYSYGVLLMETFTRKKP 71
            +S G+LL E  T + P
Sbjct: 175 YWSLGILLYELLTGRPP 191

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEY--GSEGIVSTKCDVYSY 58
           ILLD +    ++DFG+SK   + +     +    TI YMAP+   G +G      D +S 
Sbjct: 136 ILLDSNGHVVLTDFGLSKEFHEDEVERAYSFC-GTIEYMAPDIVRGGDGGHDKAVDWWSM 194

Query: 59  GVLLMETFTRKKP 71
           GVL+ E  T   P
Sbjct: 195 GVLMYELLTGASP 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE--YGSEGIVSTKCDVYSY 58
           +L+  D V  ++DFG+++    G  +   T  + T  Y APE  +G+        D++S 
Sbjct: 133 LLIASDGVLKLADFGLARSF--GSPNRKMTHQVVTRWYRAPELLFGAR-HYGVGVDMWSV 189

Query: 59  GVLLMETFTRK 69
           G +  E   R 
Sbjct: 190 GCIFAELLLRV 200

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE-YGSEGIVSTKCDVYSYG 59
           ILLD +    ++DFG+SK     +   T +    TI YMAPE    +G      D +S G
Sbjct: 136 ILLDSEGHVVLTDFGLSKEFLSEEKERTYSFC-GTIEYMAPEIIRGKGGHGKAVDWWSLG 194

Query: 60  VLLMETFTRKKP 71
           +L+ E  T   P
Sbjct: 195 ILIFELLTGASP 206

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 7/77 (9%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEY----GSEGIVSTKCDVY 56
           +L++ +    + DFGIS   G   DSV +T+      YMAPE      ++     K DV+
Sbjct: 135 VLINRNGQVKLCDFGIS---GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVW 191

Query: 57  SYGVLLMETFTRKKPTD 73
           S G+ ++E  T + P D
Sbjct: 192 SLGITMIELATGRFPYD 208

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 11  VSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RK 69
           ++DFG++KLLG  +           I +MA E     I + + DV+SYGV + E  T   
Sbjct: 150 ITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 209

Query: 70  KPTDEMFIGEMS 81
           KP D +   E+S
Sbjct: 210 KPYDGIPASEIS 221

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 36.3 bits (84), Expect = 0.003
 Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 19/107 (17%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLD      ++DFG+ K     + +VT T    TI YMAPE           D +S G 
Sbjct: 131 ILLDAQGHVKLTDFGLCKE-SIHEGTVTHTFC-GTIEYMAPEILMRSGHGKAVDWWSLGA 188

Query: 61  LLMETFT---------RKKPTDEMFIGEMSL--------RDWVNKSL 90
           L+ +  T         RKK  D++  G+++L        RD + K L
Sbjct: 189 LMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLL 235

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	159
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.95
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.95
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.93
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.93
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.92
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.92
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.92
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.92
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.92
KOG0578	550	consensus p21-activated serine/threonine protein k	99.92
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.91
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.91
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.91
PHA02988	283	hypothetical protein; Provisional	99.91
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.91
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.9
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.9
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.9
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.89
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.89
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.89
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.88
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.88
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.88
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.88
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.88
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.88
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.88
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.88
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.88
KOG0198	313	consensus MEKK and related serine/threonine protei	99.88
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.88
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.87
PTZ00283	496	serine/threonine protein kinase; Provisional	99.87
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.87
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.87
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.87
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.87
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.87
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.87
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.87
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.87
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.87
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.86
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.86
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.86
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.86
PTZ00267	478	NIMA-related protein kinase; Provisional	99.86
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.86
PHA02882	294	putative serine/threonine kinase; Provisional	99.86
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.86
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.86
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.86
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.86
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.86
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.86
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.86
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.86
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.86
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.86
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.86
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.86
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.85
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.85
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.85
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.85
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.85
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.85
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.85
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.85
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.85
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.85
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.85
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.85
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.85
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.85
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.84
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.84
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.84
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.84
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.84
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.84
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.84
PTZ00036	440	glycogen synthase kinase; Provisional	99.84
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.84
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.84
KOG0589	426	consensus Serine/threonine protein kinase [General	99.84
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.84
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.84
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.84
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.84
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.84
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.84
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.84
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.84
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.84
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.84
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.84
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.84
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.84
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.84
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.84
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.84
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.83
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.83
PTZ00284	467	protein kinase; Provisional	99.83
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.83
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.83
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.83
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.83
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.83
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.83
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.83
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.83
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.83
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.83
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.83
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.83
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.83
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.83
PHA03207	392	serine/threonine kinase US3; Provisional	99.83
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.83
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.83
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.83
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.83
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.83
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.83
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.83
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.83
KOG0584	632	consensus Serine/threonine protein kinase [General	99.83
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.83
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.82
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.82
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.82
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.82
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.82
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.82
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.82
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.82
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.82
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.82
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.82
PHA03212	391	serine/threonine kinase US3; Provisional	99.82
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.82
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.82
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.82
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.82
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.82
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.82
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.82
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.82
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.82
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.82
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.82
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.81
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.81
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.81
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.81
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.81
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.81
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.81
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.81
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.81
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.81
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.81
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.81
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.81
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.81
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.81
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.81
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.81
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.81
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.81
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.81
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.81
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.81
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.81
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.81
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.81
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.81
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.81
PHA03210	501	serine/threonine kinase US3; Provisional	99.81
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.81
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.8
PHA03211	461	serine/threonine kinase US3; Provisional	99.8
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.8
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.8
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.8
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.8
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.8
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.8
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.8
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.8
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.8
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.8
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.8
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.8
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.8
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.8
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.8
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.8
KOG3653	534	consensus Transforming growth factor beta/activin	99.8
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.8
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.8
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.8
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.8
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.8
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.8
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.8
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.8
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.8
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.8
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.8
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.8
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.8
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.8
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.8
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.8
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.8
PHA03209	357	serine/threonine kinase US3; Provisional	99.79
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.79
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.79
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.79
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.79
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.79
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.79
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.79
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.79
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.79
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.79
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.79
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.79
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.79
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.79
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.79
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.79
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.79
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.79
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.79
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.79
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.79
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.79
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.79
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.79
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.79
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.78
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.78
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.78
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.78
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.78
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.78
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.78
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.78
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.78
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.78
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.78
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.78
KOG0605	550	consensus NDR and related serine/threonine kinases	99.78
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.78
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.78
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.78
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.78
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.78
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.78
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.78
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.78
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.78
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.78
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.78
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.78
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.77
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.77
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.77
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.77
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.77
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.77
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.77
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.77
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.77
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.77
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.77
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.77
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.77
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.77
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.77
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.77
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.77
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.76
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.76
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.76
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.76
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.76
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.76
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.76
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.76
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.76
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.76
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.76
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.76
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.76
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.76
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.76
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.76
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.76
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.76
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.76
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.76
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.76
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.76
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.76
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.75
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.75
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.75
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.75
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.75
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.75
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.75
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.75
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.75
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.75
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.75
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.75
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.75
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.75
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.74
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.74
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.74
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.74
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.74
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.74
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.74
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.74
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.74
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.74
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.74
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.74
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.73
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.73
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.73
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.73
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.73
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.73
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.73
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.73
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.73
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.73
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.72
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.72
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.72
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.72
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.72
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.72
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.72
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.72
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.72
PLN00181	793	protein SPA1-RELATED; Provisional	99.72
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.72
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.72
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.72
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.71
PLN00009	294	cyclin-dependent kinase A; Provisional	99.71
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.71
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.71
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.71
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.71
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.71
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.71
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.71
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.71
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.71
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.7
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.7
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.69
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.69
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.69
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.68
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.68
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.67
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.67
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.67
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.66
KOG0610	459	consensus Putative serine/threonine protein kinase	99.66
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.65
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.64
KOG0586	596	consensus Serine/threonine protein kinase [General	99.63
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.62
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.61
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.61
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.6
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.6
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.6
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.59
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.57
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.51
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.5
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.49
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.46
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.44
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.39
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.38
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.38
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.36
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.35
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.31
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.31
KOG1152	772	consensus Signal transduction serine/threonine kin	99.16
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.15
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.1
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.06
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.04
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.95
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.84
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.72
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.71
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.49
COG4248	637	Uncharacterized protein with protein kinase and he	98.39
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	97.99
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.96
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	97.8
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.71
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	97.36
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.16
PRK09188	365	serine/threonine protein kinase; Provisional	97.1
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.01
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	96.87
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	96.84
PRK12274	218	serine/threonine protein kinase; Provisional	96.21
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	95.79
KOG1093	725	consensus Predicted protein kinase (contains TBC a	93.37
KOG1243	690	consensus Protein kinase [General function predict	88.53
KOG0576	829	consensus Mitogen-activated protein kinase kinase	84.85
PF04301	213	DUF452: Protein of unknown function (DUF452); Inte	83.82
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	83.16

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=1.7e-28  Score=169.78  Aligned_cols=130  Identities=32%  Similarity=0.490  Sum_probs=99.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++++..+||+|||+++...+ +.+.......-...|.|||.+....++.++||||||++++|+++ |+.||..+..  
T Consensus       334 iLV~~~~~vKIsDFGLAr~~~d-~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn--  410 (468)
T KOG0197|consen  334 ILVDEDLVVKISDFGLARLIGD-DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN--  410 (468)
T ss_pred             eeeccCceEEEcccccccccCC-CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH--
Confidence            7899999999999999995543 33333333334567999999999999999999999999999997 7777655321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                                     .+++..  -....+.+.|..|+..+.++|..||+.+|.+|||++.+...|+.+...
T Consensus       411 ---------------~ev~~~--le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  411 ---------------EEVLEL--LERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             ---------------HHHHHH--HhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence                           111111  112233445668999999999999999999999999888888877654

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.95  E-value=2.1e-27  Score=163.17  Aligned_cols=135  Identities=24%  Similarity=0.352  Sum_probs=101.7

Q ss_pred             CccCCCC-ceEEcccccceecCCCCCcccccccccccccccccccC--CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDM-VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS--EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~--~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.++ ++||+|||+++......  ...+...||+.|||||++.  ...|+.++||||||+++||+++|..||.....
T Consensus       174 iLv~~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~  251 (362)
T KOG0192|consen  174 ILVDLKGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP  251 (362)
T ss_pred             EEEcCCCCEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH
Confidence            5788887 99999999998864322  2233367999999999999  55899999999999999999999999976533


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhh
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDV  155 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~~  155 (159)
                      .  ......   ....             .+...+..++..+..++.+||+.||.+||++.+++..|+.+...+..+.
T Consensus       252 ~--~~~~~v---~~~~-------------~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~~  311 (362)
T KOG0192|consen  252 V--QVASAV---VVGG-------------LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSAG  311 (362)
T ss_pred             H--HHHHHH---HhcC-------------CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcccC
Confidence            1  110000   0000             0011122477789999999999999999999999999999998877543

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.93  E-value=5.8e-27  Score=169.70  Aligned_cols=130  Identities=28%  Similarity=0.460  Sum_probs=103.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      .|+.++..|||+|||+++..-..+.+...+.-.-..+||+||.+...+|+.++||||||+++||+++ |..||.+...++
T Consensus       634 CLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E  713 (774)
T KOG1026|consen  634 CLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE  713 (774)
T ss_pred             ceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH
Confidence            4788999999999999998766666665544455678999999999999999999999999999997 888987643321


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                        ..+.+.               .+.  ..+.|.+||..+..||..||+.+|++||+++||-..|++..+
T Consensus       714 --VIe~i~---------------~g~--lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  714 --VIECIR---------------AGQ--LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             --HHHHHH---------------cCC--cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence              111111               111  133456899999999999999999999999999999998754

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.93  E-value=1.7e-26  Score=154.02  Aligned_cols=125  Identities=19%  Similarity=0.248  Sum_probs=94.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.|||||||++....+.    ...+.+||..||+||.+.+..|+.++||||||+.++|++.|+.||........
T Consensus       210 lLvNskGeVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~  285 (364)
T KOG0581|consen  210 LLVNSKGEVKICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYL  285 (364)
T ss_pred             eeeccCCCEEeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCC
Confidence            68999999999999999887533    34557899999999999999999999999999999999999999865411111


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...            ++++..+...++..+.. ...+++..++..||+.||.+|||+.|+++
T Consensus       286 ~~~------------~Ll~~Iv~~ppP~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  286 DIF------------ELLCAIVDEPPPRLPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             CHH------------HHHHHHhcCCCCCCCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            111            22222222111111111 36678999999999999999999999984

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=1.5e-25  Score=145.39  Aligned_cols=124  Identities=23%  Similarity=0.300  Sum_probs=92.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |.++.+|.|||+|||+++.+.+...  ..+..+|||.||+||.++..+|+.++||||+||++|||..-++||.+.  +-.
T Consensus       159 IFl~~~gvvKLGDfGL~r~l~s~~t--fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~  234 (375)
T KOG0591|consen  159 IFLTANGVVKLGDFGLGRFLSSKTT--FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLL  234 (375)
T ss_pred             eEEcCCCceeeccchhHhHhcchhH--HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHH
Confidence            5789999999999999999864322  234567999999999999999999999999999999999999999763  112


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhc-hHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVK-MDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                      ++..-+.+.   +..              +.| ......+..++..|+..||..||+...++..+.
T Consensus       235 ~L~~KI~qg---d~~--------------~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  235 SLCKKIEQG---DYP--------------PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             HHHHHHHcC---CCC--------------CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence            222222211   110              112 356677999999999999999999654544433

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.92  E-value=1.5e-25  Score=146.60  Aligned_cols=137  Identities=20%  Similarity=0.185  Sum_probs=95.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||+..+|.+||||||+|+.....+.  ..+..+.|.||+|||.+.+ .+|+.++|||+.||++.||++|.+.|.+...-+
T Consensus       132 ILit~~gvvKLCDFGFAR~L~~pgd--~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiD  209 (396)
T KOG0593|consen  132 ILITQNGVVKLCDFGFARTLSAPGD--NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDID  209 (396)
T ss_pred             eEEecCCcEEeccchhhHhhcCCcc--hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHH
Confidence            7899999999999999998763222  3455678999999998887 589999999999999999999999987643222


Q ss_pred             ccHHHHHHhhcC-------------CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           80 MSLRDWVNKSLS-------------GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        80 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                        ..-.+.....             +.+..+.-|....-.+...........+++++..|++.||++|+++++++
T Consensus       210 --QLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll  282 (396)
T KOG0593|consen  210 --QLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL  282 (396)
T ss_pred             --HHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence              1111111111             11111111212211122222345566899999999999999999999998

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.1e-25  Score=168.05  Aligned_cols=135  Identities=27%  Similarity=0.407  Sum_probs=101.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      +|++....|||+|||+|+-+...+.+.......-...|||||.+....|+.++||||||+++||+++ |..||.....  
T Consensus       833 CLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n--  910 (1025)
T KOG1095|consen  833 CLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN--  910 (1025)
T ss_pred             eeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch--
Confidence            4788889999999999995444443333332234568999999999999999999999999999998 7788765322  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD  154 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~  154 (159)
                                     .+++...+...  +.+.|..|+..+.++|..||+.+|++||++..|++++..+.+.....
T Consensus       911 ---------------~~v~~~~~~gg--RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~  968 (1025)
T KOG1095|consen  911 ---------------FEVLLDVLEGG--RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT  968 (1025)
T ss_pred             ---------------HHHHHHHHhCC--ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence                           11111111111  33456689999999999999999999999999999999998876543

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=7.8e-26  Score=153.72  Aligned_cols=121  Identities=20%  Similarity=0.276  Sum_probs=91.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||+..+|.+|++|||++..+.+  ......+++|||.|||||+++...|+.++|+||+|++.+||+.|.+|+....+.. 
T Consensus       142 il~s~~g~vkl~DfgVa~ql~~--~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr-  218 (467)
T KOG0201|consen  142 ILLSESGDVKLADFGVAGQLTN--TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR-  218 (467)
T ss_pred             eeEeccCcEEEEecceeeeeec--hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce-
Confidence            5677789999999999988743  2333466889999999999998899999999999999999999999987654311 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       +            --+    +.+..++.... +....+.+++..|++.||..||++.++++
T Consensus       219 -v------------lfl----Ipk~~PP~L~~-~~S~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  219 -V------------LFL----IPKSAPPRLDG-DFSPPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             -E------------EEe----ccCCCCCcccc-ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence             0            001    11111111111 45567899999999999999999999985

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=2.9e-25  Score=156.06  Aligned_cols=120  Identities=19%  Similarity=0.302  Sum_probs=91.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ++++++..|||+|||+|......++  ...+.||||-|+|||++...+++..+||||+||++|.++.|++||+....   
T Consensus       149 lfL~~~~~VKIgDFGLAt~le~~~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v---  223 (592)
T KOG0575|consen  149 LFLNENMNVKIGDFGLATQLEYDGE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV---  223 (592)
T ss_pred             eeecCcCcEEecccceeeeecCccc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH---
Confidence            5788999999999999988754322  23447899999999999988999999999999999999999999975321   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        .+.+...             ....+  ..|........+|+..+|+.||++|||+++|+.
T Consensus       224 --kety~~I-------------k~~~Y--~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  224 --KETYNKI-------------KLNEY--SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             --HHHHHHH-------------HhcCc--ccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence              1111111             01111  112244556788999999999999999999984

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=3e-25  Score=154.79  Aligned_cols=123  Identities=20%  Similarity=0.290  Sum_probs=93.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+|..+..  ....+...+|||.|||||++....|+.+.||||+|++..||+.|++||-.    +.
T Consensus       400 ILL~~~g~vKltDFGFcaqi~~--~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln----E~  473 (550)
T KOG0578|consen  400 ILLTMDGSVKLTDFGFCAQISE--EQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN----EN  473 (550)
T ss_pred             eEeccCCcEEEeeeeeeecccc--ccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC----CC
Confidence            6889999999999999988753  23356668899999999999999999999999999999999999999743    22


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .++..+.....+.             .....+......+.+++.+||+.|+.+|+++.|||+
T Consensus       474 PlrAlyLIa~ng~-------------P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  474 PLRALYLIATNGT-------------PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             hHHHHHHHhhcCC-------------CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            2222211111100             001112345678999999999999999999999984

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.91  E-value=6.3e-25  Score=155.67  Aligned_cols=129  Identities=22%  Similarity=0.345  Sum_probs=103.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||+...-+|||+|||+++.+.+...+. .+...-...|++||.+....++.++|||-||+++||+++ |..||++..+.+
T Consensus       522 iLVsSp~CVKLaDFGLSR~~ed~~yYk-aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD  600 (974)
T KOG4257|consen  522 ILVSSPQCVKLADFGLSRYLEDDAYYK-ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD  600 (974)
T ss_pred             eeecCcceeeecccchhhhccccchhh-ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc
Confidence            678888999999999999986554443 233334567999999999999999999999999999986 889998865533


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                      ..                 -.  -....+.+.|+.|++.+..+|.+||.+||++||.+.++...|..+.+
T Consensus       601 VI-----------------~~--iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  601 VI-----------------GH--IENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             eE-----------------EE--ecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            21                 10  11123445677999999999999999999999999999999999887

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=2.3e-24  Score=148.86  Aligned_cols=146  Identities=40%  Similarity=0.668  Sum_probs=110.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc-ccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF-IGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~-~~~   79 (159)
                      ||+|+++.+||+|||+|+..... .....+...||.+|++||+......+.++||||||+++.|+++|+.+..... .+.
T Consensus       208 ILLD~~~~aKlsDFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~  286 (361)
T KOG1187|consen  208 ILLDEDFNAKLSDFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGE  286 (361)
T ss_pred             eeECCCCCEEccCccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCccc
Confidence            79999999999999999665321 2211111168999999999998889999999999999999999998776543 234


Q ss_pred             ccHHHHHHhhcC-CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLS-GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      ..+..|...... ..+.+++|+.+......   ...+...+..++.+|++.+|..||++.+|++.|+.+...
T Consensus       287 ~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~---~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  287 LSLVEWAKPLLEEGKLREIVDPRLKEGEYP---DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL  355 (361)
T ss_pred             ccHHHHHHHHHHCcchhheeCCCccCCCCC---hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence            457777654443 36777888877632221   015677799999999999999999999999998665543

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=8.9e-25  Score=149.10  Aligned_cols=132  Identities=23%  Similarity=0.253  Sum_probs=91.9

Q ss_pred             CccCCCCceEEcccccceecCCCC-Ccccc-cccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGD-DSVTQ-TMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~-~~~~~-~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      |||+.+|.|||+|||++..+.+++ ..... ....|++.|+|||++..  .+|+.++||||||++..|+..|..||....
T Consensus       157 ILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p  236 (516)
T KOG0582|consen  157 ILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP  236 (516)
T ss_pred             EEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC
Confidence            799999999999999987654433 23333 56789999999999443  379999999999999999999999997643


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      +...-+ ..++...+......    +..     .........+.+++..|++.||.+|||++++++
T Consensus       237 PmkvLl-~tLqn~pp~~~t~~----~~~-----d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  237 PMKVLL-LTLQNDPPTLLTSG----LDK-----DEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             hHHHHH-HHhcCCCCCccccc----CCh-----HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            322111 11111111111001    111     111233458999999999999999999999984

>PHA02988 hypothetical protein; Provisional

Probab=99.91  E-value=1.3e-24  Score=146.62  Aligned_cols=126  Identities=20%  Similarity=0.286  Sum_probs=92.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||+++......     ....|+..|+|||++.+  ..++.++|+||||+++|++++|..||......
T Consensus       154 ill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~  228 (283)
T PHA02988        154 FLVTENYKLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK  228 (283)
T ss_pred             EEECCCCcEEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH
Confidence            578899999999999987653221     12457889999999865  57889999999999999999999999753211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                           ...........+             ...+..++..+.+++.+||+.||.+|||+.++++.|+.++.
T Consensus       229 -----~~~~~i~~~~~~-------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        229 -----EIYDLIINKNNS-------------LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             -----HHHHHHHhcCCC-------------CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence                 111111000000             00112456678999999999999999999999999998764

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.91  E-value=2.6e-24  Score=148.43  Aligned_cols=132  Identities=26%  Similarity=0.417  Sum_probs=94.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............+++.|+|||++.+..++.++|+||||++++++++ |..||.......
T Consensus       205 il~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~  284 (338)
T cd05102         205 ILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE  284 (338)
T ss_pred             EEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH
Confidence            5788899999999999986543322222233445678999999988888999999999999999997 899986533211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       ........   ..        . .     ..+..++..+.+++.+||+.||++|||+.++++.|+++..+
T Consensus       285 -~~~~~~~~---~~--------~-~-----~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~  337 (338)
T cd05102         285 -EFCQRLKD---GT--------R-M-----RAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE  337 (338)
T ss_pred             -HHHHHHhc---CC--------C-C-----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence             11111100   00        0 0     00123456789999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.90  E-value=1.1e-24  Score=153.18  Aligned_cols=132  Identities=27%  Similarity=0.389  Sum_probs=102.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |||..+..|||+|||-++.....   .....+.||..|||||++.+.+.+.++||||||+++|||++|..||.......+
T Consensus       243 iLIs~~d~VKIsDFGTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI  319 (904)
T KOG4721|consen  243 ILISYDDVVKISDFGTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI  319 (904)
T ss_pred             eEeeccceEEeccccchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee
Confidence            68888899999999999876432   334557899999999999999999999999999999999999999865432111


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~  153 (159)
                      .+                  .+....-.++.|..|+..+.-|++.||+..|-.||++.+++..|+-...+++.
T Consensus       320 Iw------------------GVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell~  374 (904)
T KOG4721|consen  320 IW------------------GVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELLS  374 (904)
T ss_pred             EE------------------eccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHhc
Confidence            10                  01111222345567888999999999999999999999999888766555543

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.90  E-value=1.6e-23  Score=132.17  Aligned_cols=130  Identities=21%  Similarity=0.160  Sum_probs=91.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+|+  ||+++......       ..|++.|+|||++.+..++.++||||+|+++|++++|..||........
T Consensus        42 il~~~~~~~~~--fG~~~~~~~~~-------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~  112 (176)
T smart00750       42 ILLTWDGLLKL--DGSVAFKTPEQ-------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA  112 (176)
T ss_pred             EeEcCccceee--ccceEeecccc-------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH
Confidence            57888999999  99998764221       2578999999999988899999999999999999999999864321111


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHH--HHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCL--SSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      ........            .....+.....+....  ..+.+++.+||..+|.+||++.++++.+..+..+.
T Consensus       113 ~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~  173 (176)
T smart00750      113 ILEILLNG------------MPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAET  173 (176)
T ss_pred             HHHHHHHH------------hccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence            11111111            0101011001111222  26899999999999999999999999988876543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=3.6e-24  Score=152.22  Aligned_cols=120  Identities=26%  Similarity=0.286  Sum_probs=92.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      +|+|..+.+||+|||+|..-.++   ....+.||+|+|.+||++.+.+| +.++||||||+++|.+++|..||..     
T Consensus       143 lLLd~~~nIKIADFGMAsLe~~g---klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----  214 (786)
T KOG0588|consen  143 LLLDVKNNIKIADFGMASLEVPG---KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----  214 (786)
T ss_pred             hhhhcccCEeeeccceeecccCC---ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----
Confidence            47888888999999999764322   23455789999999999999987 5789999999999999999999963     


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      .+.+....+..            .+.   +.+|...+.+..+|+.+|+..||++|.|.+||++.
T Consensus       215 dNir~LLlKV~------------~G~---f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  215 DNIRVLLLKVQ------------RGV---FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             ccHHHHHHHHH------------cCc---ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence            22222222211            111   12345778899999999999999999999999863

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.89  E-value=2e-23  Score=140.67  Aligned_cols=127  Identities=26%  Similarity=0.446  Sum_probs=92.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++................+++.|+|||.+.+..++.++|+||+|++++++++ |..||......+
T Consensus       155 il~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~  234 (283)
T cd05048         155 CLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE  234 (283)
T ss_pred             EEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            5788899999999999986543332222333456788999999888888999999999999999997 888986532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                        ....+...           ...      ..+..++..+.+++.+||+.||.+||++.++++.|++
T Consensus       235 --~~~~i~~~-----------~~~------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         235 --VIEMIRSR-----------QLL------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             --HHHHHHcC-----------CcC------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence              11111110           000      1123566789999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=4.4e-23  Score=141.83  Aligned_cols=136  Identities=18%  Similarity=0.179  Sum_probs=94.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-CCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||+..+..+||+|||+||...+..   ..+..+.|.||+|||++. +..|+.+.|+|++||+++|+.+-++.|.+...-|
T Consensus       141 iLi~~~~~iKiaDFGLARev~Skp---PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D  217 (538)
T KOG0661|consen  141 ILISGNDVIKIADFGLAREVRSKP---PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID  217 (538)
T ss_pred             eEecccceeEecccccccccccCC---CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH
Confidence            577778899999999999886444   456678999999999865 4578999999999999999999999887643222


Q ss_pred             ccHHHHHHhhcCCcccchh-h-----hhc-------cccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVI-D-----ANL-------ARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~-~-----~~~-------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ..-.+.........+.. .     ..+       .+..-....+ .+.++..+++.+|+.+||++|||++++++
T Consensus       218 --qi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~  290 (538)
T KOG0661|consen  218 --QIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQ  290 (538)
T ss_pred             --HHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence              22222222221111111 1     011       1111111122 37788999999999999999999999885

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.89  E-value=1.1e-23  Score=148.26  Aligned_cols=135  Identities=21%  Similarity=0.327  Sum_probs=95.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC---ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |++.++++|||+|||++..-.............|+.-|+|||++.-.   +|+..+|||+||++.||+++|..||. +..
T Consensus       519 IFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~  597 (678)
T KOG0193|consen  519 IFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQN  597 (678)
T ss_pred             eEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCC
Confidence            67788899999999998763222222233445688889999986533   68899999999999999999999987 322


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      .+.++..     +.   +    ..+.++  .......++..+.+|+..||..++.+||.+.+|+..|+.+...
T Consensus       598 ~dqIifm-----VG---r----G~l~pd--~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  598 RDQIIFM-----VG---R----GYLMPD--LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             hhheEEE-----ec---c----cccCcc--chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence            2211100     00   0    001111  0011136778899999999999999999999999999988875

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=3.5e-23  Score=137.89  Aligned_cols=140  Identities=21%  Similarity=0.169  Sum_probs=93.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ++++.+..+||+|||+|+...........+..+.|.+|.|||.+... .|+.+.|+||.||++.||++|++.|.+...- 
T Consensus       156 ll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v-  234 (359)
T KOG0660|consen  156 LLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV-  234 (359)
T ss_pred             eeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH-
Confidence            57888999999999999987543222234667789999999986554 7999999999999999999999998753221 


Q ss_pred             ccHHHHHHhhcC------------Ccccchhhhhccccchh-hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS------------GELTQVIDANLARDEQS-FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .....+-...+            ...+..+.........+ .....+..+..++|+.+||..||.+|+|++|+++
T Consensus       235 -~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  235 -HQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             -HHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence             11111111111            11111221111111111 0112245678899999999999999999999884

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.88  E-value=1.3e-22  Score=136.60  Aligned_cols=131  Identities=24%  Similarity=0.354  Sum_probs=94.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...........+...++..|++||+..+..++.++|+||||++++++++ |..||.......
T Consensus       140 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~  219 (279)
T cd05111         140 ILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE  219 (279)
T ss_pred             EEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            5788899999999999987643332222333456778999999988888999999999999999997 888986532111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                        ....+....            ..     ..+..+...+..++.+||..||++|||+.++++.|..+.+.
T Consensus       220 --~~~~~~~~~------------~~-----~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~  271 (279)
T cd05111         220 --VPDLLEKGE------------RL-----AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD  271 (279)
T ss_pred             --HHHHHHCCC------------cC-----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence              111111100            00     00112345678899999999999999999999999987764

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=1e-23  Score=142.72  Aligned_cols=123  Identities=22%  Similarity=0.294  Sum_probs=89.1

Q ss_pred             CccCCC---CceEEcccccceecCCCCCcccccccccccccccccccCCCc---cccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDED---MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI---VSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      ||+..+   ..+||+|||+|+....   .....+.||||.|.|||++.+..   ++.++|+||+||++|.+++|.+||..
T Consensus       307 ILl~~~~e~~llKItDFGlAK~~g~---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~  383 (475)
T KOG0615|consen  307 ILLSNDAEDCLLKITDFGLAKVSGE---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSE  383 (475)
T ss_pred             EEeccCCcceEEEecccchhhcccc---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccc
Confidence            455544   7899999999998742   22344578999999999988764   34578999999999999999999986


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccch-hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ... +.++.+.+.               .+... ..+......++.++++.++|..||++|||+.|+++
T Consensus       384 ~~~-~~sl~eQI~---------------~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  384 EYT-DPSLKEQIL---------------KGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             ccC-CccHHHHHh---------------cCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            432 222222111               11110 11223366788999999999999999999999983

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.88  E-value=5.7e-24  Score=153.59  Aligned_cols=134  Identities=28%  Similarity=0.447  Sum_probs=102.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      ||++.+..+|++|||+++.+.+..... ...+..-..+|.|||.+...+++.++||||||+++||+++ |..||=.+.+ 
T Consensus       762 ILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN-  840 (996)
T KOG0196|consen  762 ILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-  840 (996)
T ss_pred             eeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch-
Confidence            789999999999999999875443221 1111223568999999999999999999999999999986 8888644322 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~  153 (159)
                                      ++++...  ...++++.|++|+..+..||..||+.|-.+||.+.+|+..|+++...-.+
T Consensus       841 ----------------QdVIkaI--e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~S  897 (996)
T KOG0196|consen  841 ----------------QDVIKAI--EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNS  897 (996)
T ss_pred             ----------------HHHHHHH--HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchh
Confidence                            1122110  11233455779999999999999999999999999999999999876544

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.88  E-value=1.5e-22  Score=139.76  Aligned_cols=131  Identities=26%  Similarity=0.411  Sum_probs=93.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.+.........+...++..|+|||++.+..++.++|+||+||+++++++ |..||......+
T Consensus       204 ill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~  283 (337)
T cd05054         204 ILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE  283 (337)
T ss_pred             EEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH
Confidence            5788899999999999987643322222233445678999999988889999999999999999997 999986532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                       .....+....    .        .     ..+......+.+++.+||+.+|++||++.++++.|+++.+
T Consensus       284 -~~~~~~~~~~----~--------~-----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         284 -EFCRRLKEGT----R--------M-----RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             -HHHHHHhccC----C--------C-----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence             1111111100    0        0     0011334578899999999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=7.6e-23  Score=141.52  Aligned_cols=139  Identities=21%  Similarity=0.221  Sum_probs=95.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||||.+|.+||+|||+|+++...... ..+..+-|.||.|||.+.+. .|+.+.|+||.||++.|++.|++.|++..  +
T Consensus       249 iLidn~G~LKiaDFGLAr~y~~~~~~-~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t--E  325 (560)
T KOG0600|consen  249 ILIDNNGVLKIADFGLARFYTPSGSA-PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT--E  325 (560)
T ss_pred             eEEcCCCCEEeccccceeeccCCCCc-ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc--H
Confidence            79999999999999999988654433 35556689999999998887 79999999999999999999999987632  2


Q ss_pred             ccHHHHHHhhcC----Cccc--c-----hhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS----GELT--Q-----VIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~----~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ......+.+...    ..|.  .     .+.+.......-+......+...++|+..+|..||++|.|+.+++.
T Consensus       326 veQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  326 VEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             HHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            222222211111    1122  0     0000000001111223344677889999999999999999998774

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.88  E-value=2.4e-22  Score=135.94  Aligned_cols=131  Identities=26%  Similarity=0.432  Sum_probs=94.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++............+...++..|+|||++.+..++.++|+||||++++++++ |..||......+
T Consensus       151 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~  230 (288)
T cd05093         151 CLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE  230 (288)
T ss_pred             EEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            5788999999999999976543322222233445778999999988888999999999999999998 888886533211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                        ....+..   ....        .      .+...+..+.+++.+||+.||.+|||+.++++.|+++.+.
T Consensus       231 --~~~~i~~---~~~~--------~------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         231 --VIECITQ---GRVL--------Q------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             --HHHHHHc---CCcC--------C------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence              1111111   0000        0      0112345789999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=2.1e-23  Score=145.83  Aligned_cols=121  Identities=21%  Similarity=0.337  Sum_probs=86.9

Q ss_pred             CCceEEcccccceecCCCCCcccccccccccccccccccCCC-----------ccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            6 DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-----------IVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         6 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-----------~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      +|.+||+|||.|..+............+||+-||+||.+..-           +.+.++||||+||++|+|+.|+.||..
T Consensus       495 kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~  574 (677)
T KOG0596|consen  495 KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ  574 (677)
T ss_pred             eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH
Confidence            478999999999988766666667778999999999965321           256789999999999999999999875


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...       .+.     .+..+.++......+..+    ....+.++|+.||..||.+|||+.+||+
T Consensus       575 ~~n-------~~a-----Kl~aI~~P~~~Iefp~~~----~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  575 IIN-------QIA-----KLHAITDPNHEIEFPDIP----ENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             HHH-------HHH-----HHHhhcCCCccccccCCC----CchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            321       111     112233332222111111    1123899999999999999999999984

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.88  E-value=2.8e-22  Score=135.78  Aligned_cols=131  Identities=25%  Similarity=0.417  Sum_probs=94.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++................++..|+|||++.+..++.++|+||+|++++++++ |..||.......
T Consensus       154 il~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  233 (291)
T cd05094         154 CLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE  233 (291)
T ss_pred             EEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            5788899999999999976543322222233456788999999888888899999999999999998 899975532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                        .......   .....              .+..++..+.+++.+||+.+|++|||+.++++.|+++.+.
T Consensus       234 --~~~~~~~---~~~~~--------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         234 --VIECITQ---GRVLE--------------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             --HHHHHhC---CCCCC--------------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence              1111110   00000              0112456788999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.88  E-value=3.4e-23  Score=139.14  Aligned_cols=130  Identities=24%  Similarity=0.326  Sum_probs=89.4

Q ss_pred             CccCC-CCceEEcccccceecCC-CCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDE-DMVAHVSDFGISKLLGD-GDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~-~~~~kl~Dfg~~~~~~~-~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++. ++.+||+|||.+..... ...........||+.|+|||++.+. ....++|+||+||++.||++|+.||... .
T Consensus       148 iLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~  226 (313)
T KOG0198|consen  148 ILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-F  226 (313)
T ss_pred             EEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-c
Confidence            57888 79999999999987642 1112223346799999999998853 2335899999999999999999998763 0


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                      .....  ...........              ..|...+....+++.+|++.||.+|||+.+++....-.
T Consensus       227 ~~~~~--~~~ig~~~~~P--------------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~  280 (313)
T KOG0198|consen  227 EEAEA--LLLIGREDSLP--------------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK  280 (313)
T ss_pred             chHHH--HHHHhccCCCC--------------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence            00000  01110000000              12234566789999999999999999999999765443

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.88  E-value=2.4e-22  Score=140.42  Aligned_cols=130  Identities=22%  Similarity=0.374  Sum_probs=91.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............++..|+|||++.+..++.++|+||+|++++++++ |..||.......
T Consensus       243 il~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~  322 (374)
T cd05106         243 VLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS  322 (374)
T ss_pred             EEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH
Confidence            5788889999999999987543322222222335667999999888888999999999999999997 999986542211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                       .........            ....     .+...+..+.+++.+||+.||.+|||+.++++.|+++.
T Consensus       323 -~~~~~~~~~------------~~~~-----~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         323 -KFYKMVKRG------------YQMS-----RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             -HHHHHHHcc------------cCcc-----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence             111111100            0000     01123457889999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.87  E-value=3.5e-22  Score=134.54  Aligned_cols=131  Identities=20%  Similarity=0.292  Sum_probs=94.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++.+.............++..|+|||++.+..++.++|+||+|++++++++ |..||.....  
T Consensus       148 il~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--  225 (280)
T cd05043         148 CVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--  225 (280)
T ss_pred             EEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--
Confidence            5778889999999999986643332222222345667999999888888999999999999999998 9999865321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      .....+......            .     ..+..++..+.+++.+||..||++|||+.++++.|+.+.++
T Consensus       226 ~~~~~~~~~~~~------------~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         226 FEMAAYLKDGYR------------L-----AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             HHHHHHHHcCCC------------C-----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            111111111100            0     00113456789999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.87  E-value=1.5e-22  Score=145.69  Aligned_cols=123  Identities=25%  Similarity=0.310  Sum_probs=90.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++.+.............||+.|+|||++.+..++.++|+||+|++++++++|..||.....   
T Consensus       174 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~---  250 (496)
T PTZ00283        174 ILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM---  250 (496)
T ss_pred             EEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH---
Confidence            67889999999999999876433222223345789999999999888899999999999999999999999864321   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ............        .      +.+...+..+.+++.+||+.||.+||++.+++.
T Consensus       251 --~~~~~~~~~~~~--------~------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~  296 (496)
T PTZ00283        251 --EEVMHKTLAGRY--------D------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN  296 (496)
T ss_pred             --HHHHHHHhcCCC--------C------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence              111111111100        0      012244567889999999999999999999985

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.2e-22  Score=144.70  Aligned_cols=115  Identities=20%  Similarity=0.238  Sum_probs=89.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||+|..|.+||+|||+|+..-.  .....++.+|||.|+|||++....|+.++|.|+||+++|||+.|+.||.+...   
T Consensus       499 iLLD~eGh~kiADFGlcKe~m~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE---  573 (694)
T KOG0694|consen  499 LLLDTEGHVKIADFGLCKEGMG--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE---  573 (694)
T ss_pred             eEEcccCcEEecccccccccCC--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH---
Confidence            6899999999999999987431  22245668999999999999999999999999999999999999999975321   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                                    .++++..+..++.   .|.....+..++|.+.+..+|.+|.-+
T Consensus       574 --------------ee~FdsI~~d~~~---yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  574 --------------EEVFDSIVNDEVR---YPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             --------------HHHHHHHhcCCCC---CCCcccHHHHHHHHHHhccCcccccCC
Confidence                          2223332222211   133566788899999999999999876

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.87  E-value=1.2e-22  Score=135.49  Aligned_cols=125  Identities=26%  Similarity=0.447  Sum_probs=85.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++................+...|+|||.+.+..++.++||||||++++|+++ |..||.....  
T Consensus       134 ill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--  211 (259)
T PF07714_consen  134 ILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--  211 (259)
T ss_dssp             EEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence            5788899999999999987633333222333446778999999988889999999999999999999 6788754311  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                      ......+....                 ....+..++..+.+++..||..||.+|||+.++++.|
T Consensus       212 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  212 EEIIEKLKQGQ-----------------RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHHTTE-----------------ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ccccccccccc-----------------cceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            11111111100                 0011224566788999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.87  E-value=7.1e-23  Score=136.78  Aligned_cols=114  Identities=28%  Similarity=0.270  Sum_probs=83.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||+|.+|+++|+|||+|+.....  .....+.+||+.|+|||++...+|+.++|.||+|+++|+|++|.+||.....   
T Consensus       156 ILLd~~GHi~LtDFgL~k~~~~~--~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~---  230 (357)
T KOG0598|consen  156 ILLDEQGHIKLTDFGLCKEDLKD--GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV---  230 (357)
T ss_pred             eeecCCCcEEEeccccchhcccC--CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH---
Confidence            79999999999999999864322  2233447999999999999999999999999999999999999999975321   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI  135 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  135 (159)
                        ..++.......        +..      .+.-......+++.+.+..||.+|.
T Consensus       231 --~~~~~~I~~~k--------~~~------~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  231 --KKMYDKILKGK--------LPL------PPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             --HHHHHHHhcCc--------CCC------CCccCCHHHHHHHHHHhccCHHHhc
Confidence              11111111111        000      0111345678899999999999996

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.87  E-value=5.9e-22  Score=133.34  Aligned_cols=126  Identities=31%  Similarity=0.473  Sum_probs=89.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............+++.|+|||++.+..++.++|+||+|++++++++ |..||.......
T Consensus       153 ili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~  232 (280)
T cd05049         153 CLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE  232 (280)
T ss_pred             EEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            5788899999999999976533222222233345778999999988889999999999999999998 999986432211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                        ....+..   ..        ...      .+...+..+.+++.+||..||++||++.|+++.|+
T Consensus       233 --~~~~~~~---~~--------~~~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         233 --VIECITQ---GR--------LLQ------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             --HHHHHHc---CC--------cCC------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence              1111110   00        000      01134567899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.87  E-value=6.1e-22  Score=145.27  Aligned_cols=131  Identities=23%  Similarity=0.403  Sum_probs=95.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCccccccc-ccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT-MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~-~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      ||+.++..+||+|||+++...+.+.+...... .-...|+|||.+....|+.++||||||+++||+++ |..||.+... 
T Consensus       449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-  527 (609)
T KOG0200|consen  449 VLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-  527 (609)
T ss_pred             EEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-
Confidence            68888999999999999876544433322111 12345999999999899999999999999999987 7788765221 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                      ...+.+++.                 ..+...+|..|..++.++|+.||+.+|++||++.++...++....
T Consensus       528 ~~~l~~~l~-----------------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~  581 (609)
T KOG0200|consen  528 TEELLEFLK-----------------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ  581 (609)
T ss_pred             HHHHHHHHh-----------------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence            011111111                 111222345678889999999999999999999999999999654

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.87  E-value=3.3e-22  Score=142.43  Aligned_cols=128  Identities=23%  Similarity=0.337  Sum_probs=96.6

Q ss_pred             ccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccccc
Q 035782            2 LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGEM   80 (159)
Q Consensus         2 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~~   80 (159)
                      |+.++..||++|||+++.+...... .+.+..-...|.|||.+....++.++|||+||+++||+.+ |..||.++..   
T Consensus       397 LVgEnhiVKvADFGLsRlMtgDTYT-AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl---  472 (1157)
T KOG4278|consen  397 LVGENHIVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---  472 (1157)
T ss_pred             cccccceEEeeccchhhhhcCCcee-cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH---
Confidence            6788899999999999998643322 2222334567999999988889999999999999999986 7788766431   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                        .+.         -.++..     .++...|..|++.+.+||+.||+.+|++||++.|+.+.++.+-+
T Consensus       473 --SqV---------Y~LLEk-----gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  473 --SQV---------YGLLEK-----GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             --HHH---------HHHHhc-----cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence              000         112221     12223456899999999999999999999999999999987643

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.87  E-value=9.1e-22  Score=131.90  Aligned_cols=128  Identities=26%  Similarity=0.419  Sum_probs=91.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |++++++.+||+|||+++.+.............++..|++||++.+..++.++|+||+|++++++++ |..||...... 
T Consensus       144 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-  222 (273)
T cd05035         144 CMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-  222 (273)
T ss_pred             EEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence            5778889999999999987643332222222234567999999888788899999999999999998 88888653211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                       .........   ..              ...+..++..+.+++.+||+.||++|||+.++++.|+++
T Consensus       223 -~~~~~~~~~---~~--------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         223 -EIYDYLRHG---NR--------------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             -HHHHHHHcC---CC--------------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence             111111110   00              001124556789999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.87  E-value=7.3e-22  Score=127.22  Aligned_cols=138  Identities=18%  Similarity=0.217  Sum_probs=93.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      +|++.+|.+||+|||+++.+.........  .+-|.+|.|||.+.+. .|+..+|+||.||++.|++.|.+-|.+..  +
T Consensus       132 LLis~~g~lKiADFGLAr~f~~p~~~~~~--~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~s--D  207 (318)
T KOG0659|consen  132 LLISSDGQLKIADFGLARFFGSPNRIQTH--QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDS--D  207 (318)
T ss_pred             eEEcCCCcEEeecccchhccCCCCccccc--ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCc--h
Confidence            58899999999999999998755544332  3678999999988876 68999999999999999999887776532  2


Q ss_pred             ccHHHHHHhhc----CCcccchh---h---hhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSL----SGELTQVI---D---ANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~----~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ......+....    ...|.++.   +   -...+.+........+....++++.++|..||.+|+|+.|+++
T Consensus       208 idQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~  280 (318)
T KOG0659|consen  208 IDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK  280 (318)
T ss_pred             HHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence            22222221111    11122211   1   0001111111123355667899999999999999999999885

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.87  E-value=6.5e-22  Score=138.32  Aligned_cols=129  Identities=20%  Similarity=0.338  Sum_probs=90.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............++..|+|||++.+..++.++|+||||++++++++ |..||.......
T Consensus       245 ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~  324 (375)
T cd05104         245 ILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS  324 (375)
T ss_pred             EEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH
Confidence            5778889999999999987643322222222335667999999988889999999999999999997 788876532111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                       .....+....    .        ..     .+...+..+.+++..||+.||++|||+.++++.|++.
T Consensus       325 -~~~~~~~~~~----~--------~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         325 -KFYKMIKEGY----R--------ML-----SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             -HHHHHHHhCc----c--------CC-----CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence             1111111110    0        00     0112345688999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.86  E-value=9.4e-22  Score=133.96  Aligned_cols=133  Identities=26%  Similarity=0.369  Sum_probs=89.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh--cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||+++...............++..|+|||++....++.++|+||||++++++++  +..||......
T Consensus       169 ill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~  248 (304)
T cd05096         169 CLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE  248 (304)
T ss_pred             eEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH
Confidence            5788999999999999987643332222233445778999999888888999999999999999986  45666543211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                        .................    .      ...+..++..+.+++.+||+.||.+|||+.+|.+.|+
T Consensus       249 --~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         249 --QVIENAGEFFRDQGRQV----Y------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             --HHHHHHHHHhhhccccc----c------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence              11111111100000000    0      0011235567899999999999999999999988875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.86  E-value=1.1e-21  Score=131.54  Aligned_cols=128  Identities=27%  Similarity=0.446  Sum_probs=90.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.+.............+++.|++||+..+..++.++|+||+|++++++++ |..||...... 
T Consensus       143 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-  221 (272)
T cd05075         143 CMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-  221 (272)
T ss_pred             eEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence            5788899999999999987643332211222345667999999888888999999999999999998 78888653211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                       .....+..   ....        .      .+...+..+.+++.+||+.||++|||+.++++.|+++
T Consensus       222 -~~~~~~~~---~~~~--------~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         222 -EIYDYLRQ---GNRL--------K------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             -HHHHHHHc---CCCC--------C------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence             11111111   0000        0      0113455688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.86  E-value=6.2e-22  Score=133.52  Aligned_cols=127  Identities=24%  Similarity=0.373  Sum_probs=89.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |++++++.+||+|||+++...............+++.|+|||+..+..++.++|+||+|++++++++ |..||...... 
T Consensus       155 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-  233 (283)
T cd05091         155 VLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-  233 (283)
T ss_pred             eEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence            5678889999999999876543322222233445778999999887788899999999999999997 77787643211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                       .....+.   ....        .      ..+..++..+.+++..||+.+|.+||++.+|+..|+.
T Consensus       234 -~~~~~i~---~~~~--------~------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         234 -DVIEMIR---NRQV--------L------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             -HHHHHHH---cCCc--------C------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence             1111111   1100        0      0122456678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.86  E-value=1.5e-21  Score=131.39  Aligned_cols=132  Identities=20%  Similarity=0.302  Sum_probs=92.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............+++.|++||...+..++.++|+||||++++++++ |..||...... 
T Consensus       140 il~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-  218 (279)
T cd05109         140 VLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR-  218 (279)
T ss_pred             EEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence            5778889999999999987643222211122234567999999888888999999999999999987 88887643211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                       .....+.....            .     +.+..++..+.+++..||+.||++||++.++++.|+++....
T Consensus       219 -~~~~~~~~~~~------------~-----~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         219 -EIPDLLEKGER------------L-----PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             -HHHHHHHCCCc------------C-----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence             11111111100            0     001134557889999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.86  E-value=6.4e-22  Score=142.13  Aligned_cols=123  Identities=24%  Similarity=0.257  Sum_probs=89.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++.+............+||+.|+|||++.+..++.++|+||+|++++++++|..||.....   
T Consensus       200 Ill~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~---  276 (478)
T PTZ00267        200 IFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ---  276 (478)
T ss_pred             EEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---
Confidence            68899999999999999876433322223445699999999999888899999999999999999999999864221   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ...........        ...      .+......+.+++.+||..||++||++.+++.
T Consensus       277 --~~~~~~~~~~~--------~~~------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        277 --REIMQQVLYGK--------YDP------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             --HHHHHHHHhCC--------CCC------CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence              11111111000        000      01133456889999999999999999999874

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.86  E-value=8.1e-22  Score=134.96  Aligned_cols=132  Identities=24%  Similarity=0.366  Sum_probs=93.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.+.............++..|++||++.+..++.++|+||||+++|++++ |..||.......
T Consensus       140 ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~  219 (316)
T cd05108         140 VLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  219 (316)
T ss_pred             eEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            5788899999999999987653332222222334667999999988888999999999999999987 888886432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                        .........                 ..+.+..+...+.+++..||..+|++||++.+++..|..+....
T Consensus       220 --~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~  272 (316)
T cd05108         220 --ISSILEKGE-----------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  272 (316)
T ss_pred             --HHHHHhCCC-----------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence              111111000                 00011234456889999999999999999999999998887653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.86  E-value=1.1e-21  Score=133.15  Aligned_cols=132  Identities=13%  Similarity=0.050  Sum_probs=91.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-----ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-----VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||++.++.++|+|||+++.+......     .......||+.|+|||+..+..++.++|+||+|++++++++|..||...
T Consensus       157 ill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~  236 (294)
T PHA02882        157 IMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF  236 (294)
T ss_pred             EEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence            57888999999999999876432211     1112245899999999988888999999999999999999999999764


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                      .... ........       +++.+......    ....++..+.+++..||..+|++||++.++++.|
T Consensus       237 ~~~~-~~~~~~~~-------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        237 GHNG-NLIHAAKC-------DFIKRLHEGKI----KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             ccch-HHHHHhHH-------HHHHHhhhhhh----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            2211 11100000       00010000000    0113456788999999999999999999999876

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.86  E-value=2.6e-21  Score=131.76  Aligned_cols=132  Identities=23%  Similarity=0.379  Sum_probs=93.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++.+.............+++.|+|||++.+..++.++|+||||++++++++ |..||.....  
T Consensus       168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--  245 (304)
T cd05101         168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--  245 (304)
T ss_pred             EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--
Confidence            5788889999999999987643332222222345678999999988888999999999999999997 6777754321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                         ........... .             ...+..++..+.+++.+||+.+|++|||+.++++.|+++....
T Consensus       246 ---~~~~~~~~~~~-~-------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~  300 (304)
T cd05101         246 ---EELFKLLKEGH-R-------------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT  300 (304)
T ss_pred             ---HHHHHHHHcCC-c-------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence               11111100000 0             0011245667889999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.86  E-value=2.1e-21  Score=131.45  Aligned_cols=130  Identities=27%  Similarity=0.398  Sum_probs=92.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |++++++.+||+|||+++...............++..|++||+..+..++.++|+||||++++++++ |..||...... 
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-  236 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE-  236 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence            5788899999999999976543332222223345678999998888788899999999999999998 88888643211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                       ........            ....     ..+...+..+.+++..||+.+|.+||++.++++.|+++..
T Consensus       237 -~~~~~~~~------------~~~~-----~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         237 -RLFNLLKT------------GYRM-----ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             -HHHHHHhC------------CCCC-----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence             11111110            0000     0112345678899999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.86  E-value=3e-22  Score=140.79  Aligned_cols=119  Identities=25%  Similarity=0.356  Sum_probs=93.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||+++.|.+|+||||+|+.+..  .....+...|||.|||||.+.+.+|+..+|.||+||++||+..|++||....    
T Consensus       131 iLl~~~~~~KlcdFg~Ar~m~~--~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s----  204 (808)
T KOG0597|consen  131 ILLEKGGTLKLCDFGLARAMST--NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS----  204 (808)
T ss_pred             eeecCCCceeechhhhhhhccc--CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH----
Confidence            7899999999999999998853  3445666789999999999999999999999999999999999999985421    


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                                   +.+++...+.....   -|......+.+++...+..||.+|.|..+++
T Consensus       205 -------------i~~Lv~~I~~d~v~---~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll  249 (808)
T KOG0597|consen  205 -------------ITQLVKSILKDPVK---PPSTASSSFVNFLQGLLIKDPAQRLTWTDLL  249 (808)
T ss_pred             -------------HHHHHHHHhcCCCC---CcccccHHHHHHHHHHhhcChhhcccHHHHh
Confidence                         11222211111111   1225667789999999999999999999887

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.86  E-value=1.3e-21  Score=132.61  Aligned_cols=129  Identities=28%  Similarity=0.435  Sum_probs=90.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++.+.............++..|+|||++.+..++.++|+||||++++++++ |..||.......
T Consensus       163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~  242 (293)
T cd05053         163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE  242 (293)
T ss_pred             EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence            5778899999999999987643322211222234567999999888888999999999999999997 888875432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                        ........            ...     ..+..+...+.+++.+||..||.+|||+.++++.|+++.
T Consensus       243 --~~~~~~~~------------~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         243 --LFKLLKEG------------YRM-----EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             --HHHHHHcC------------CcC-----CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence              11111000            000     011234567889999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=8e-22  Score=136.63  Aligned_cols=119  Identities=25%  Similarity=0.279  Sum_probs=88.0

Q ss_pred             CccCCC-CceEEcccccceecCCCCCcccccccccccccccccccCCCc-cc-cchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDED-MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI-VS-TKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~-~~-~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.+ +.+||+|||++....  .........+||+.|+|||++.+.. |. .++||||+|+++|.|++|..||.... 
T Consensus       151 illd~~~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~-  227 (370)
T KOG0583|consen  151 ILLDGNEGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN-  227 (370)
T ss_pred             EEecCCCCCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc-
Confidence            578888 999999999998873  1122345578999999999998876 75 78999999999999999999997622 


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHH-HHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDC-LSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                          ....+.......             ..  .|... ...+..++.+|+..||.+|+|+.+++
T Consensus       228 ----~~~l~~ki~~~~-------------~~--~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  228 ----VPNLYRKIRKGE-------------FK--IPSYLLSPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             ----HHHHHHHHhcCC-------------cc--CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence                111111111000             00  01122 56788999999999999999999999

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.86  E-value=2.4e-21  Score=129.54  Aligned_cols=130  Identities=20%  Similarity=0.253  Sum_probs=92.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++........  ......+++.|+|||.+.+..++.++|+||+|++++++++|..||........
T Consensus       137 il~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~  214 (267)
T cd08228         137 VFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF  214 (267)
T ss_pred             EEEcCCCCEEECccccceeccchhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH
Confidence            5788899999999999887643221  12234578899999998887788899999999999999999999854322111


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                      .....+..   ....        +.     .....+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       215 ~~~~~~~~---~~~~--------~~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         215 SLCQKIEQ---CDYP--------PL-----PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HHHHHHhc---CCCC--------CC-----ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            11111110   0000        00     01134567899999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.86  E-value=9.1e-22  Score=141.29  Aligned_cols=125  Identities=23%  Similarity=0.350  Sum_probs=92.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCccccccc-ccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT-MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~-~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      +|+...-.|||+|||+.+.+..++..+..... .-...|+|||.+....|+.++|||+||+++|||++ |+.||.+... 
T Consensus       243 lllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g-  321 (1039)
T KOG0199|consen  243 LLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG-  321 (1039)
T ss_pred             heecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-
Confidence            35566778999999999998766654432221 22446999999999999999999999999999997 6788765321 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                                       ..+-..+. .....+.+..|++.+.++|+.||..+|.+|||+.+|...+
T Consensus       322 -----------------~qIL~~iD-~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  322 -----------------IQILKNID-AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             -----------------HHHHHhcc-ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence                             01111122 2233344568999999999999999999999999987443

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.86  E-value=8.4e-22  Score=132.91  Aligned_cols=140  Identities=20%  Similarity=0.317  Sum_probs=92.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++......... ......++..|++||......++.++|+||+|++++++++|..|+...... 
T Consensus       138 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~-  216 (283)
T cd05080         138 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK-  216 (283)
T ss_pred             EEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch-
Confidence            578888999999999998764322211 112223556799999988778889999999999999999999887542211 


Q ss_pred             ccHHHHHHhhc----CCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSL----SGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        80 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                        .........    .......++...     ..+.+...+..+.+++..||+.+|++|||+.+++..|+++.
T Consensus       217 --~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         217 --FEEMIGPKQGQMTVVRLIELLERGM-----RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             --hhhhhcccccccchhhhhhhhhcCC-----CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence              000000000    000111111111     01112345678999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.86  E-value=1.4e-21  Score=132.17  Aligned_cols=137  Identities=20%  Similarity=0.197  Sum_probs=89.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++......   ......|++.|+|||.+.+..++.++|+||+|++++++++|..||......+ 
T Consensus       141 il~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-  216 (290)
T cd07862         141 ILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-  216 (290)
T ss_pred             EEEcCCCCEEEccccceEeccCCc---ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-
Confidence            578899999999999998764321   2233568999999999888888899999999999999999999987532211 


Q ss_pred             cHHHHHHhhc----CCcccchh---hhhccccch--hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSL----SGELTQVI---DANLARDEQ--SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~----~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ....+....    +..+....   .........  ...........+.+++.+||+.||++|||+.++++
T Consensus       217 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         217 -QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             -HHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence             111111110    00110000   000000000  00011134566789999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.86  E-value=1.9e-21  Score=131.03  Aligned_cols=126  Identities=26%  Similarity=0.417  Sum_probs=88.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |++++++.+||+|||++..+.............+++.|+|||+..+..++.++|+||||++++++++ |..||......+
T Consensus       153 il~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~  232 (280)
T cd05092         153 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE  232 (280)
T ss_pred             EEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH
Confidence            5788899999999999976543222222222335678999999888888999999999999999998 888875432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                        .........               .  ...+..++..+.+++.+||+.||.+||++.+|++.|+
T Consensus       233 --~~~~~~~~~---------------~--~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         233 --AIECITQGR---------------E--LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             --HHHHHHcCc---------------c--CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence              111110000               0  0011234567889999999999999999999998886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.86  E-value=3.5e-21  Score=131.36  Aligned_cols=134  Identities=25%  Similarity=0.375  Sum_probs=93.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||.+................+++.|+|||++.+..++.++|+||+|++++++++ |..||...... 
T Consensus       171 ill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~-  249 (307)
T cd05098         171 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-  249 (307)
T ss_pred             eEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH-
Confidence            5788899999999999876543222111122234567999999888888899999999999999998 77887542211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~  153 (159)
                       .........            ..     ...+...+..+.+++.+||+.+|++|||+.++++.|+++.+....
T Consensus       250 -~~~~~~~~~------------~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~~  305 (307)
T cd05098         250 -ELFKLLKEG------------HR-----MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTSN  305 (307)
T ss_pred             -HHHHHHHcC------------CC-----CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhhc
Confidence             011111100            00     001123456788999999999999999999999999999887543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.86  E-value=7.4e-22  Score=126.34  Aligned_cols=116  Identities=19%  Similarity=0.191  Sum_probs=85.7

Q ss_pred             CceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHH
Q 035782            7 MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWV   86 (159)
Q Consensus         7 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~   86 (159)
                      --+||+|||++....++.   ...+..|||+|++||+++..+|+..+|+|++|+++|-++.|.+||.+....        
T Consensus       150 A~vKL~~FGvAi~l~~g~---~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~--------  218 (355)
T KOG0033|consen  150 AAVKLADFGLAIEVNDGE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------  218 (355)
T ss_pred             CceeecccceEEEeCCcc---ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH--------
Confidence            468999999999886332   344577999999999999999999999999999999999999998652211        


Q ss_pred             HhhcCCcccchhhhhccccch-hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           87 NKSLSGELTQVIDANLARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                               .+..+....... +.+......++..+|+++|+..||++|+|+.|.|+
T Consensus       219 ---------rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  219 ---------RLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             ---------HHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence                     111111111100 00112355677889999999999999999999884

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.85  E-value=1.9e-21  Score=136.81  Aligned_cols=131  Identities=20%  Similarity=0.398  Sum_probs=93.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............++..|+|||.+.+..++.++|+||||++++++++ |..||.......
T Consensus       268 ill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~  347 (400)
T cd05105         268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS  347 (400)
T ss_pred             EEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence            5788889999999999987543322222223346778999999888888999999999999999996 888886532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                      . ....+...            .     ....+..++..+.+++.+||+.||++|||+.+|.+.|+++.+
T Consensus       348 ~-~~~~~~~~------------~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         348 T-FYNKIKSG------------Y-----RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             H-HHHHHhcC------------C-----CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence            1 10111000            0     000112455678999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.85  E-value=7.1e-22  Score=128.18  Aligned_cols=123  Identities=26%  Similarity=0.272  Sum_probs=88.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC---ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||+|..|.+|+||||.+..+.+   +...+...|-+.|||||.+...   +|..++||||||++++|+.+|+.||.....
T Consensus       223 ILlDe~GniKlCDFGIsGrlvd---SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t  299 (391)
T KOG0983|consen  223 ILLDERGNIKLCDFGISGRLVD---SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT  299 (391)
T ss_pred             eEEccCCCEEeecccccceeec---ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc
Confidence            7999999999999999977643   2234445688899999987543   688899999999999999999999987543


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      + ......+....               ++..+.-..-.+.+.+++..||..|+.+||...++++
T Consensus       300 d-Fe~ltkvln~e---------------PP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  300 D-FEVLTKVLNEE---------------PPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             c-HHHHHHHHhcC---------------CCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            2 22211111111               1111111123457889999999999999999988874

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.85  E-value=2.2e-21  Score=130.46  Aligned_cols=126  Identities=24%  Similarity=0.405  Sum_probs=88.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++................+++.|+|||++.+..++.++|+||||++++++++ |..||...... 
T Consensus       150 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-  228 (277)
T cd05062         150 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-  228 (277)
T ss_pred             EEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence            5788899999999999876543322222222345778999999888788999999999999999998 67887543211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                       .......   .....        .      .+..++..+.+++.+||+.||++|||+.++++.|+
T Consensus       229 -~~~~~~~---~~~~~--------~------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         229 -QVLRFVM---EGGLL--------D------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             -HHHHHHH---cCCcC--------C------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence             1111110   00000        0      01234567899999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.85  E-value=1.2e-21  Score=135.19  Aligned_cols=140  Identities=19%  Similarity=0.199  Sum_probs=87.8

Q ss_pred             CccCCCCceEEcccccceecCCCCC-cccccccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.++.+||+|||+++....... ........|++.|+|||++.+  ..++.++|+||+|++++++++|+.||.....
T Consensus       134 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~  213 (338)
T cd07859         134 ILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV  213 (338)
T ss_pred             eEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh
Confidence            6789999999999999976432211 112234568999999998765  4678899999999999999999999865321


Q ss_pred             ccccHHHHHHhhcC------------Ccccchhhhhccccchhh-hhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLS------------GELTQVIDANLARDEQSF-FVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  .....+.....            ......+.......+... .........+.+++.+||..||++|||++++++
T Consensus       214 ~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         214 V--HQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             H--HHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            1  00011100000            000111111111100000 000123456789999999999999999999984

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.85  E-value=1.6e-21  Score=131.81  Aligned_cols=139  Identities=17%  Similarity=0.143  Sum_probs=88.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........ .......|++.|+|||++.+..++.++|+||+|++++++++|+.||......+.
T Consensus       131 ill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~  209 (287)
T cd07848         131 LLISHNDVLKLCDFGFARNLSEGSN-ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ  209 (287)
T ss_pred             EEEcCCCcEEEeeccCccccccccc-ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence            5788999999999999987643221 122335688999999998888889999999999999999999999975322111


Q ss_pred             cHHHHHHhhc---C----------Ccccchhhhhccc-cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSL---S----------GELTQVIDANLAR-DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~---~----------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .. .+....   +          ........+.... ...........+..+.+++.+||+.||.+|||+.++++
T Consensus       210 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         210 -LF-TIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             -HH-HHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence             00 000000   0          0000000000000 00000001124557899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.85  E-value=4e-21  Score=131.45  Aligned_cols=135  Identities=24%  Similarity=0.390  Sum_probs=94.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............++..|++||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~  244 (314)
T cd05099         165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE  244 (314)
T ss_pred             EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            5778899999999999986543222111112234457999999888888999999999999999998 788875432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD  154 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~  154 (159)
                        .........                 ....+..++..+.+++.+||+.+|++|||+.++++.|+++.....++
T Consensus       245 --~~~~~~~~~-----------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~  300 (314)
T cd05099         245 --LFKLLREGH-----------------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEE  300 (314)
T ss_pred             --HHHHHHcCC-----------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCC
Confidence              111111000                 00011234567889999999999999999999999999998765443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.85  E-value=1.1e-21  Score=131.92  Aligned_cols=126  Identities=25%  Similarity=0.430  Sum_probs=89.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............++..|+|||.+.+..++.++|+||||++++++++ |..||...... 
T Consensus       150 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-  228 (277)
T cd05032         150 CMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE-  228 (277)
T ss_pred             EEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-
Confidence            5788999999999999986644332222233446778999999887788899999999999999998 88888542211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                       ........   ..        .      ...+..++..+.+++.+||+.+|++|||+.+++..|+
T Consensus       229 -~~~~~~~~---~~--------~------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         229 -EVLKFVID---GG--------H------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             -HHHHHHhc---CC--------C------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence             11111110   00        0      0011233567899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.85  E-value=4.7e-21  Score=128.02  Aligned_cols=127  Identities=23%  Similarity=0.360  Sum_probs=89.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++......... ......++..|++||...+..++.++|+||||++++++++ |..||......+
T Consensus       135 il~~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~  213 (263)
T cd05052         135 CLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ  213 (263)
T ss_pred             EEEcCCCcEEeCCCccccccccceee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            57888999999999999876432211 1111224567999999888888899999999999999998 888876432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                        ....+...            ...     ..+...+..+.+++.+||..||++|||+.++++.|+++
T Consensus       214 --~~~~~~~~------------~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         214 --VYELLEKG------------YRM-----ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             --HHHHHHCC------------CCC-----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence              11111100            000     01123456799999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.85  E-value=4.9e-21  Score=127.54  Aligned_cols=128  Identities=27%  Similarity=0.371  Sum_probs=90.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||++.......... ......++..|+|||.+....++.++|+||||++++++++ |..||......
T Consensus       126 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  205 (257)
T cd05116         126 VLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN  205 (257)
T ss_pred             EEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            577888999999999998764332211 1122234578999999887778889999999999999997 89998653221


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                        .....+.....            .     ..+..++..+.+++.+||+.||++||++.+|.+.|++.
T Consensus       206 --~~~~~i~~~~~------------~-----~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         206 --EVTQMIESGER------------M-----ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             --HHHHHHHCCCC------------C-----CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence              11111211100            0     01124556789999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.85  E-value=2.8e-21  Score=131.56  Aligned_cols=129  Identities=20%  Similarity=0.346  Sum_probs=90.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+|++|||++................++..|+|||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       172 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~  251 (302)
T cd05055         172 VLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS  251 (302)
T ss_pred             EEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH
Confidence            5778889999999999986643332222222345678999999888888899999999999999998 888886532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                       .........            ....     .+...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       252 -~~~~~~~~~------------~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         252 -KFYKLIKEG------------YRMA-----QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             -HHHHHHHcC------------CcCC-----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence             111111100            0000     0112345789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=6.6e-21  Score=130.36  Aligned_cols=142  Identities=20%  Similarity=0.324  Sum_probs=104.7

Q ss_pred             CccCCCCceEEcccccceecCCCCC--cccccccccccccccccccCCC----cc--ccchhhHhHHHHHHHHHhc----
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD--SVTQTMTMATIGYMAPEYGSEG----IV--STKCDVYSYGVLLMETFTR----   68 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~gt~~~~~pe~~~~~----~~--~~~~dv~s~g~~~~~~~~~----   68 (159)
                      ||+.++|++.|+|+|+|........  ....+..+||.+|||||++...    .+  -..+||||||.++||+..+    
T Consensus       347 ILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~g  426 (513)
T KOG2052|consen  347 ILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESG  426 (513)
T ss_pred             EEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcC
Confidence            7899999999999999977643211  1233456799999999987653    12  1469999999999999874    


Q ss_pred             ------CCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           69 ------KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        69 ------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                            +.||....+.++++.+...-.-        .+.+.+..+.+.........+.++|+.||..+|+.|.|+-.+.+
T Consensus       427 gi~eey~~Pyyd~Vp~DPs~eeMrkVVC--------v~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK  498 (513)
T KOG2052|consen  427 GIVEEYQLPYYDVVPSDPSFEEMRKVVC--------VQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK  498 (513)
T ss_pred             CEehhhcCCcccCCCCCCCHHHHhccee--------ecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence                  3677777777776655432211        22233333333444577888999999999999999999999999


Q ss_pred             HHHHHHHH
Q 035782          143 KLKKIKEK  150 (159)
Q Consensus       143 ~l~~~~~~  150 (159)
                      .|.++.+.
T Consensus       499 tl~~l~~~  506 (513)
T KOG2052|consen  499 TLAKLSNS  506 (513)
T ss_pred             HHHHHhcC
Confidence            99999863

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.85  E-value=6.3e-21  Score=129.89  Aligned_cols=132  Identities=23%  Similarity=0.333  Sum_probs=93.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............++..|++||++.+..++.++|+||||++++++++ |..||.....  
T Consensus       140 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--  217 (303)
T cd05110         140 VLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--  217 (303)
T ss_pred             eeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence            5778889999999999987643222222222345678999999888888999999999999999987 8888854321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      .....+......            .     +.+..++..+..++..||..+|++||++.++++.|+++.+..
T Consensus       218 ~~~~~~~~~~~~------------~-----~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~  272 (303)
T cd05110         218 REIPDLLEKGER------------L-----PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP  272 (303)
T ss_pred             HHHHHHHHCCCC------------C-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence            111111111000            0     001123456889999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=3.9e-21  Score=128.00  Aligned_cols=129  Identities=29%  Similarity=0.445  Sum_probs=91.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCccc-ccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVT-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||+++.......... .....++..|++||...+..++.++|+||||++++++++ |..||..... 
T Consensus       126 ili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-  204 (257)
T cd05060         126 VLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-  204 (257)
T ss_pred             EEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-
Confidence            5788899999999999987643332211 111223467999999888888999999999999999997 8999865321 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                       ......+.....                 ...+..++..+.+++.+||..+|++||++.++++.|+++.
T Consensus       205 -~~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         205 -AEVIAMLESGER-----------------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             -HHHHHHHHcCCc-----------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence             111121111100                 0111234567899999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.85  E-value=5.2e-21  Score=129.06  Aligned_cols=127  Identities=27%  Similarity=0.433  Sum_probs=89.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||++................++..|++||++.+..++.++|+||+|++++++++ |..||.....  
T Consensus       155 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--  232 (283)
T cd05090         155 ILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--  232 (283)
T ss_pred             EEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--
Confidence            5788899999999999987643332222233445677999999887788999999999999999998 8888754321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                      ............                 .+.+..++..+.+++..||+.||.+||++.++++.|+.
T Consensus       233 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         233 QEVIEMVRKRQL-----------------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHHHcCCc-----------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            111111111000                 00112345678899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.84  E-value=2.4e-21  Score=131.36  Aligned_cols=133  Identities=24%  Similarity=0.318  Sum_probs=88.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh--cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--~~~p~~~~~~~   78 (159)
                      |+++.++.++|+|||+++...............+++.|+|||+..+..++.++|+||||++++++++  +..||..... 
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~-  239 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD-  239 (296)
T ss_pred             eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh-
Confidence            5788889999999999986543332222333456778999999888788999999999999999987  5667654221 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                       .................          .....+...+..+.+++.+||+.||++|||+.+|++.|+
T Consensus       240 -~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         240 -QQVIENAGHFFRDDGRQ----------IYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             -HHHHHHHHhcccccccc----------ccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence             11111111100000000          000011234567999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.84  E-value=8.6e-21  Score=126.89  Aligned_cols=129  Identities=19%  Similarity=0.247  Sum_probs=91.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++........  ......++..|+|||...+..++.++|+||+|++++++++|..||.....+..
T Consensus       137 ili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~  214 (267)
T cd08229         137 VFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY  214 (267)
T ss_pred             EEEcCCCCEEECcchhhhccccCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH
Confidence            5788899999999999877643221  12234578899999998888888899999999999999999999854321111


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                      ........           ....+.     .....+..+.+++.+||+.||++|||+.+|++.+.++
T Consensus       215 ~~~~~~~~-----------~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         215 SLCKKIEQ-----------CDYPPL-----PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             HHhhhhhc-----------CCCCCC-----CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            11110000           000000     0123556789999999999999999999999998876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.84  E-value=5e-21  Score=127.72  Aligned_cols=130  Identities=25%  Similarity=0.413  Sum_probs=88.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc--cccccccccccccccccCCCccccchhhHhHHHHHHHHHhc-CCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV--TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTR-KKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~-~~p~~~~~~   77 (159)
                      ||++.++.+||+|||+++.........  ......++..|+|||.+.+..++.++|+||||++++++++| ..||.....
T Consensus       129 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~  208 (262)
T cd05058         129 CMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS  208 (262)
T ss_pred             EEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence            578889999999999997653222111  11123456689999998888889999999999999999995 455543211


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                        .........   .            ...  ..+...+..+.+++..||+.+|++||++.++++.|+++..
T Consensus       209 --~~~~~~~~~---~------------~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         209 --FDITVYLLQ---G------------RRL--LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             --HHHHHHHhc---C------------CCC--CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence              111111100   0            000  0011234578899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.84  E-value=2.2e-21  Score=129.57  Aligned_cols=137  Identities=18%  Similarity=0.162  Sum_probs=93.3

Q ss_pred             CccCCC-CceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDED-MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||+|.+ |.+||||||.|+....++...   ..+.|..|+|||.+.+. .|+.+.||||.||++.||+.|++.|.+....
T Consensus       156 lLvD~~tg~LKicDFGSAK~L~~~epni---SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~  232 (364)
T KOG0658|consen  156 LLVDPDTGVLKICDFGSAKVLVKGEPNI---SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV  232 (364)
T ss_pred             EEEcCCCCeEEeccCCcceeeccCCCce---eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH
Confidence            467754 999999999999876554432   24578899999987766 7999999999999999999999999873222


Q ss_pred             cccHHHHHHhhcCCccc----------chhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           79 EMSLRDWVNKSLSGELT----------QVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                       ..+...+...-.+..+          +...+.+...+.........++...+++.+++.++|.+|.++.|++
T Consensus       233 -dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l  304 (364)
T KOG0658|consen  233 -DQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL  304 (364)
T ss_pred             -HHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence             2222222111111111          1111222222222222335677899999999999999999999887

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.84  E-value=8.9e-21  Score=126.84  Aligned_cols=128  Identities=27%  Similarity=0.453  Sum_probs=90.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++................++..|++||...+..++.++|+||||++++++++ |..||...... 
T Consensus       137 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~-  215 (266)
T cd05033         137 ILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-  215 (266)
T ss_pred             EEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH-
Confidence            5788899999999999987642222111112234567999999888888899999999999999987 88887542211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                       .....+.....           .      +.+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus       216 -~~~~~~~~~~~-----------~------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         216 -DVIKAVEDGYR-----------L------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             -HHHHHHHcCCC-----------C------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence             11111111000           0      01123456789999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.84  E-value=1.6e-21  Score=137.55  Aligned_cols=135  Identities=24%  Similarity=0.331  Sum_probs=100.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh--cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--~~~p~~~~~~~   78 (159)
                      +|+|+++++||+|||+++.+-.++.+......+-..+|+|+|.+.-.+++.++|+|+||+++||+++  ...||.....+
T Consensus       668 cLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e  747 (807)
T KOG1094|consen  668 CLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE  747 (807)
T ss_pred             eeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH
Confidence            5889999999999999998766777766666677889999999888899999999999999999964  67887654321


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                      .  ..        .+...+++.  .+...-...|..|+..+.++|.+||..|..+||+++++..-|++.
T Consensus       748 ~--vv--------en~~~~~~~--~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  748 Q--VV--------ENAGEFFRD--QGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             H--HH--------HhhhhhcCC--CCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            1  10        111111110  001111233557888999999999999999999999999888764

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.84  E-value=2.7e-21  Score=130.95  Aligned_cols=131  Identities=22%  Similarity=0.335  Sum_probs=103.3

Q ss_pred             ccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccccc
Q 035782            2 LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGEM   80 (159)
Q Consensus         2 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~~   80 (159)
                      +||+..+|||+|-.+++-.-+.+..+..........||++|.+....|+.++|+||||+++||+.+ |+.|+..+.+.++
T Consensus       428 vIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm  507 (563)
T KOG1024|consen  428 VIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM  507 (563)
T ss_pred             eehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH
Confidence            578888999999999998766666555555556678999999999999999999999999999986 8899876543221


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      .  .++                 ++.++.-+|.+|+.+++.+|.-||..+|++||+++++..-|.+...++
T Consensus       508 ~--~yl-----------------kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql  559 (563)
T KOG1024|consen  508 E--HYL-----------------KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL  559 (563)
T ss_pred             H--HHH-----------------hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence            1  111                 122233345689999999999999999999999999999998876554

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.84  E-value=3.7e-21  Score=136.93  Aligned_cols=144  Identities=15%  Similarity=0.146  Sum_probs=89.2

Q ss_pred             CccCCC-CceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDED-MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++.+ +.+||+|||+++.+.....   .....||+.|+|||++.+. .++.++|+||+||+++++++|.+||......
T Consensus       201 ILl~~~~~~vkL~DFGla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~  277 (440)
T PTZ00036        201 LLIDPNTHTLKLCDFGSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV  277 (440)
T ss_pred             EEEcCCCCceeeeccccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence            567755 4799999999987643222   2234678999999987654 6889999999999999999999999753221


Q ss_pred             cccHHHHHHhhcCCcc----------cchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH--HHHHH
Q 035782           79 EMSLRDWVNKSLSGEL----------TQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA--AKLKK  146 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll--~~l~~  146 (159)
                      + .....+........          ..+.-+.+.........+...+..+.+++.+||..||.+|||+.|++  ..+..
T Consensus       278 ~-~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~  356 (440)
T PTZ00036        278 D-QLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD  356 (440)
T ss_pred             H-HHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence            1 11111111000000          00000000000000111223456789999999999999999999998  44444


Q ss_pred             HH
Q 035782          147 IK  148 (159)
Q Consensus       147 ~~  148 (159)
                      +.
T Consensus       357 ~~  358 (440)
T PTZ00036        357 LR  358 (440)
T ss_pred             hh
Confidence            43

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.84  E-value=4.5e-21  Score=129.55  Aligned_cols=130  Identities=20%  Similarity=0.267  Sum_probs=89.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++........   .....|+..|+|||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       133 ill~~~~~~kl~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-  208 (285)
T cd05631         133 ILLDDRGHIRISDLGLAVQIPEGET---VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV-  208 (285)
T ss_pred             EEECCCCCEEEeeCCCcEEcCCCCe---ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-
Confidence            5788899999999999987532221   233568999999999988889999999999999999999999997532211 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHH--HHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAAA--KLKKIKE  149 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll~--~l~~~~~  149 (159)
                       ..............              ..+......+.+++.+||+.||.+||+     ++++++  .+..+..
T Consensus       209 -~~~~~~~~~~~~~~--------------~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~  269 (285)
T cd05631         209 -KREEVDRRVKEDQE--------------EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF  269 (285)
T ss_pred             -hHHHHHHHhhcccc--------------cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence             00001100000000              001123457888999999999999997     788885  3444433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.84  E-value=7e-21  Score=129.63  Aligned_cols=140  Identities=16%  Similarity=0.143  Sum_probs=85.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||++........  ......+++.|+|||++.+. .++.++|+||+|++++++++|..||.......
T Consensus       134 ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  211 (303)
T cd07869         134 LLISDTGELKLADFGLARAKSVPSH--TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ  211 (303)
T ss_pred             EEECCCCCEEECCCCcceeccCCCc--cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence            5788999999999999876432221  22335678999999987654 57888999999999999999999997543211


Q ss_pred             ccHHHHHHhhcCC---cccchhh-hhccc------cc---hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSG---ELTQVID-ANLAR------DE---QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~---~~~~~~~-~~~~~------~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .............   .+..... +...+      .+   ............+.+++.+||+.||.+|||+.++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         212 DQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             HHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            1111111100000   0000000 00000      00   000000112345778999999999999999999984

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.84  E-value=1.8e-21  Score=134.50  Aligned_cols=122  Identities=23%  Similarity=0.239  Sum_probs=94.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |++.+++.+||+|||+|+.+....  .....++||+.|+.||.+.+.+|+.++|+||+||++|||.+-+++|.....   
T Consensus       137 ifltk~~~VkLgDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m---  211 (426)
T KOG0589|consen  137 IFLTKDKKVKLGDFGLAKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM---  211 (426)
T ss_pred             hhccccCceeecchhhhhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch---
Confidence            577888899999999999885433  233457899999999999999999999999999999999999999876322   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                                    ..++.+.....  ..+.+......+..++..|+..+|..||++.+++..
T Consensus       212 --------------~~Li~ki~~~~--~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  212 --------------SELILKINRGL--YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             --------------HHHHHHHhhcc--CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence                          22222211111  111233566788999999999999999999999966

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.84  E-value=7.1e-21  Score=132.25  Aligned_cols=139  Identities=17%  Similarity=0.135  Sum_probs=88.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++......   ......|++.|+|||++.+..++.++|+||+|++++++++|..||......+.
T Consensus       150 ill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  226 (355)
T cd07874         150 IVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ  226 (355)
T ss_pred             EEECCCCCEEEeeCcccccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            578899999999999997653221   22335688999999999888889999999999999999999999975321110


Q ss_pred             cHHHHHHhhcC----------Ccccchhhhh----------c-ccc--chhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           81 SLRDWVNKSLS----------GELTQVIDAN----------L-ARD--EQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        81 ~~~~~~~~~~~----------~~~~~~~~~~----------~-~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                       +...+.....          ......+...          . ...  +............+.+++.+||+.||.+|||+
T Consensus       227 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~  305 (355)
T cd07874         227 -WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV  305 (355)
T ss_pred             -HHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCH
Confidence             0000000000          0000000000          0 000  00000111224567899999999999999999


Q ss_pred             HHHHHH
Q 035782          138 TDAAAK  143 (159)
Q Consensus       138 ~~ll~~  143 (159)
                      .|+++.
T Consensus       306 ~ell~h  311 (355)
T cd07874         306 DEALQH  311 (355)
T ss_pred             HHHhcC
Confidence            999963

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.84  E-value=6.4e-21  Score=132.89  Aligned_cols=137  Identities=16%  Similarity=0.117  Sum_probs=88.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++......   ......+++.|+|||++.+..++.++|+||+|++++++++|+.||......+ 
T Consensus       157 Ill~~~~~~kL~DfG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-  232 (364)
T cd07875         157 IVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-  232 (364)
T ss_pred             EEECCCCcEEEEeCCCccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-
Confidence            678899999999999997653221   2233568899999999988889999999999999999999999997532211 


Q ss_pred             cHHHHHHhhcCCcccch-------hhhhccccc-----------------hhhhhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782           81 SLRDWVNKSLSGELTQV-------IDANLARDE-----------------QSFFVKMDCLSSIMHLALDCCMESPDQRIY  136 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  136 (159)
                      .+...+.. .......+       +.......+                 ............+.+++.+|++.||.+|||
T Consensus       233 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t  311 (364)
T cd07875         233 QWNKVIEQ-LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS  311 (364)
T ss_pred             HHHHHHHh-cCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCC
Confidence            01111100 00000000       000000000                 000000112346789999999999999999


Q ss_pred             HHHHHH
Q 035782          137 MTDAAA  142 (159)
Q Consensus       137 ~~~ll~  142 (159)
                      +.++++
T Consensus       312 ~~e~L~  317 (364)
T cd07875         312 VDEALQ  317 (364)
T ss_pred             HHHHhc
Confidence            999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.84  E-value=1.2e-20  Score=131.06  Aligned_cols=125  Identities=19%  Similarity=0.285  Sum_probs=84.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||++.++.+||+|||+++.......  ......|+..|+|||++..     ...+.++||||||++++++++|+.||...
T Consensus       199 Ill~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~  276 (353)
T PLN00034        199 LLINSAKNVKIADFGVSRILAQTMD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVG  276 (353)
T ss_pred             EEEcCCCCEEEcccccceecccccc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence            6788999999999999987642211  1233568999999998743     22346899999999999999999998732


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      ..++  +...........              ....+......+.+++.+||+.||++|||+.|+++.
T Consensus       277 ~~~~--~~~~~~~~~~~~--------------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        277 RQGD--WASLMCAICMSQ--------------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             CCcc--HHHHHHHHhccC--------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            2111  111111000000              000112345678999999999999999999999863

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.84  E-value=3.6e-21  Score=128.36  Aligned_cols=126  Identities=30%  Similarity=0.501  Sum_probs=89.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||.+.........  .....++..|++||+.....++.++|+||+|++++++++ |..||...... 
T Consensus       135 ilv~~~~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-  211 (261)
T cd05148         135 ILVGEDLVCKVADFGLARLIKEDVYL--SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-  211 (261)
T ss_pred             EEEcCCceEEEccccchhhcCCcccc--ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-
Confidence            57888999999999999765332211  112335668999999887788889999999999999998 78888653211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                       .....+.....                 .+.+..++..+.+++.+||+.||++|||+.++++.|+++
T Consensus       212 -~~~~~~~~~~~-----------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         212 -EVYDQITAGYR-----------------MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             -HHHHHHHhCCc-----------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence             11111110000                 011224556789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.84  E-value=9.3e-21  Score=128.13  Aligned_cols=127  Identities=24%  Similarity=0.365  Sum_probs=88.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++.................+..|+|||+..+..++.++|+||||++++++++ |..||...... 
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~-  239 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE-  239 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence            5778899999999999876543322222222334667999999888888999999999999999997 77787543211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                          +.........        ...      .+...+..+.+++.+||+.+|++|||+.|+++.|++
T Consensus       240 ----~~~~~~~~~~--------~~~------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         240 ----EVIYYVRDGN--------VLS------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             ----HHHHHHhcCC--------CCC------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence                1111111000        000      112345678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.84  E-value=8e-21  Score=132.18  Aligned_cols=138  Identities=16%  Similarity=0.096  Sum_probs=87.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||+++......   ......||+.|+|||++.+..++.++|+||+|++++++++|..||......+ 
T Consensus       154 Il~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~-  229 (359)
T cd07876         154 IVVKSDCTLKILDFGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID-  229 (359)
T ss_pred             EEECCCCCEEEecCCCccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence            678899999999999997643221   1233468899999999988889999999999999999999999997542211 


Q ss_pred             cHHHHHHhhcCCc----------ccchhhhhcccc-------------chhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           81 SLRDWVNKSLSGE----------LTQVIDANLARD-------------EQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        81 ~~~~~~~~~~~~~----------~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                      .+...........          ............             +............+.+++.+||..||.+|||+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~  309 (359)
T cd07876         230 QWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISV  309 (359)
T ss_pred             HHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCH
Confidence            1111110000000          000000000000             00000011124568899999999999999999


Q ss_pred             HHHHH
Q 035782          138 TDAAA  142 (159)
Q Consensus       138 ~~ll~  142 (159)
                      .|++.
T Consensus       310 ~e~l~  314 (359)
T cd07876         310 DEALR  314 (359)
T ss_pred             HHHhc
Confidence            99986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.84  E-value=1.5e-20  Score=127.66  Aligned_cols=129  Identities=25%  Similarity=0.353  Sum_probs=90.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||++......   ........+..|++||+..+..++.++|+||||++++++++ |..||...... 
T Consensus       150 ill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-  225 (297)
T cd05089         150 VLVGENLASKIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-  225 (297)
T ss_pred             EEECCCCeEEECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence            57888999999999998643211   01111223456999999888788899999999999999997 98998653211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                          ........         ....     ..+...+..+.+++.+||..+|.+||++.++++.|+++.+..
T Consensus       226 ----~~~~~~~~---------~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~  279 (297)
T cd05089         226 ----ELYEKLPQ---------GYRM-----EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR  279 (297)
T ss_pred             ----HHHHHHhc---------CCCC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence                11111000         0000     011234567889999999999999999999999999988755

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.84  E-value=9.2e-21  Score=126.41  Aligned_cols=126  Identities=22%  Similarity=0.402  Sum_probs=89.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++......... ......++..|+|||+.....++.++|+||+|++++++++ |..||.......
T Consensus       134 ili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~  212 (261)
T cd05072         134 VLVSESLMCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD  212 (261)
T ss_pred             EEecCCCcEEECCCccceecCCCcee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH
Confidence            57888999999999999876432211 1222335668999999888788889999999999999998 888986432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                        ....+....    .             .+.....+..+.+++.+||..+|++||++.++.+.|++
T Consensus       213 --~~~~~~~~~----~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         213 --VMSALQRGY----R-------------MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             --HHHHHHcCC----C-------------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence              111111100    0             00111344578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=3.8e-21  Score=137.33  Aligned_cols=123  Identities=22%  Similarity=0.270  Sum_probs=94.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCccccccccccccccccccc-----CCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYG-----SEGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~-----~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||+..+|.++|+|||++....  .....+..++|||+|||||+.     +..+|..++||||||+++.+|..+.+|....
T Consensus       161 iL~TldGdirLADFGVSAKn~--~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel  238 (1187)
T KOG0579|consen  161 ILLTLDGDIRLADFGVSAKNK--STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL  238 (1187)
T ss_pred             eEEEecCcEeeecccccccch--hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc
Confidence            678889999999999986642  223345668999999999964     5668999999999999999999999986543


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .+  +.               ++-..-...++...+|......+.+++.+||..||..||++.++++
T Consensus       239 np--MR---------------VllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  239 NP--MR---------------VLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             ch--HH---------------HHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence            21  11               1112223345555566678888999999999999999999999984

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.84  E-value=8.4e-21  Score=126.30  Aligned_cols=123  Identities=27%  Similarity=0.391  Sum_probs=87.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++.......     ....++..|+|||+..+..++.++|+||+|++++++++ |..||...... 
T Consensus       133 il~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~-  206 (256)
T cd05082         133 VLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-  206 (256)
T ss_pred             EEEcCCCcEEecCCccceeccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence            578899999999999987643221     11234567999999888788899999999999999997 88887542211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                       .....+....            ..     ..+..++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       207 -~~~~~~~~~~------------~~-----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         207 -DVVPRVEKGY------------KM-----DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             -HHHHHHhcCC------------CC-----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence             1111111100            00     01124566789999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.84  E-value=1.3e-20  Score=130.41  Aligned_cols=132  Identities=26%  Similarity=0.405  Sum_probs=91.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||++................++..|++||.+.+..++.++|+||||++++++++ |..||.......
T Consensus       210 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  289 (343)
T cd05103         210 ILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  289 (343)
T ss_pred             EEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH
Confidence            5788899999999999976533222222222335667999999888788899999999999999996 888876532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       ..........    .       ..      .+....+.+.+++..||+.||++|||+.+|++.|+.+.+.
T Consensus       290 -~~~~~~~~~~----~-------~~------~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~  342 (343)
T cd05103         290 -EFCRRLKEGT----R-------MR------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  342 (343)
T ss_pred             -HHHHHHhccC----C-------CC------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence             0111010000    0       00      0111234688999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.84  E-value=6.5e-21  Score=133.09  Aligned_cols=122  Identities=19%  Similarity=0.310  Sum_probs=89.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCc---------c--cccccccccccccccccCCCccccchhhHhHHHHHHHHHhcC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS---------V--TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRK   69 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~---------~--~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~   69 (159)
                      ||+|+++++||+|||.|+.+......         .  ....++||-.|.+||++.....+..+|+|+|||++|.|+.|+
T Consensus       205 ILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~  284 (604)
T KOG0592|consen  205 ILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQ  284 (604)
T ss_pred             eeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCC
Confidence            79999999999999999987532211         1  124578999999999999999999999999999999999999


Q ss_pred             CCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           70 KPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        70 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      +||.... +-..+.......+          ..         +..-++...+|+.+.|..||++|+|+.+|.+
T Consensus       285 PPFra~N-eyliFqkI~~l~y----------~f---------p~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~  337 (604)
T KOG0592|consen  285 PPFRAAN-EYLIFQKIQALDY----------EF---------PEGFPEDARDLIKKLLVRDPSDRLTSQQIKA  337 (604)
T ss_pred             CCCcccc-HHHHHHHHHHhcc----------cC---------CCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence            9996531 1111111111110          00         1123457888999999999999999988764

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.84  E-value=1.2e-20  Score=130.02  Aligned_cols=136  Identities=19%  Similarity=0.239  Sum_probs=88.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++.......    .....|++.|+|||++.+..++.++|+||+|++++++++|+.||......+ 
T Consensus       135 il~~~~~~~kl~Dfg~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-  209 (331)
T cd06649         135 ILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE-  209 (331)
T ss_pred             EEEcCCCcEEEccCcccccccccc----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence            578889999999999987653221    223468999999999988888999999999999999999999986432211 


Q ss_pred             cHHHHHHhhcCCc----c---------------------------cchhhhhccccchhhhhchHHHHHHHHHHhhhcCC
Q 035782           81 SLRDWVNKSLSGE----L---------------------------TQVIDANLARDEQSFFVKMDCLSSIMHLALDCCME  129 (159)
Q Consensus        81 ~~~~~~~~~~~~~----~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  129 (159)
                       +...+.......    .                           ..+.+......... .........+.+++.+||+.
T Consensus       210 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~  287 (331)
T cd06649         210 -LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPK-LPNGVFTPDFQEFVNKCLIK  287 (331)
T ss_pred             -HHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcC-CCCccccHHHHHHHHHHccC
Confidence             111111000000    0                           00000000000000 00112346789999999999


Q ss_pred             CCCCCCcHHHHHHH
Q 035782          130 SPDQRIYMTDAAAK  143 (159)
Q Consensus       130 ~p~~Rpt~~~ll~~  143 (159)
                      ||++|||+.++++.
T Consensus       288 ~P~~Rpt~~ell~h  301 (331)
T cd06649         288 NPAERADLKMLMNH  301 (331)
T ss_pred             CcccCCCHHHHhcC
Confidence            99999999999854

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.84  E-value=1.3e-21  Score=137.28  Aligned_cols=133  Identities=25%  Similarity=0.373  Sum_probs=95.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      +|++.++.+||+|||+++.-.  ..........-...|+|||.+...-|+.++||||||+++||+++ |..||.+.... 
T Consensus       293 cL~~~~~~vKISDFGLs~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-  369 (474)
T KOG0194|consen  293 CLYSKKGVVKISDFGLSRAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-  369 (474)
T ss_pred             heecCCCeEEeCccccccCCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-
Confidence            477888889999999987642  11111111224568999999999999999999999999999998 77888664321 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~  153 (159)
                       ....++                .....+.+.+...+..+..++..||..+|++||++.++.+.|+.+......
T Consensus       370 -~v~~kI----------------~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  370 -EVKAKI----------------VKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             -HHHHHH----------------HhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence             111111                011111112225567788899999999999999999999999999887664

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.84  E-value=2.1e-20  Score=124.92  Aligned_cols=130  Identities=19%  Similarity=0.250  Sum_probs=91.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++.........  .....+++.|.|||++.+..++.++|+||+|++++++++|..||....   .
T Consensus       137 il~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~  211 (267)
T cd08224         137 VFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---M  211 (267)
T ss_pred             EEECCCCcEEEeccceeeeccCCCcc--cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---c
Confidence            57888999999999998765432211  122457888999999888888899999999999999999999985432   1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                      ..............        .+.+     ....+..+.+++.+||+.+|++|||+.+|++.|+++.
T Consensus       212 ~~~~~~~~~~~~~~--------~~~~-----~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         212 NLYSLCKKIEKCDY--------PPLP-----ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             cHHHHHhhhhcCCC--------CCCC-----hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            11111111100000        0000     0134557889999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.84  E-value=1.2e-20  Score=125.62  Aligned_cols=126  Identities=31%  Similarity=0.469  Sum_probs=90.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||.+................++..|+|||......++.++|+||+|++++++++ |..||.....  
T Consensus       136 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--  213 (262)
T cd00192         136 CLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--  213 (262)
T ss_pred             EEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--
Confidence            5788889999999999987654332222333456788999999888788899999999999999998 5888865421  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                         ..........              .....+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus       214 ---~~~~~~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         214 ---EEVLEYLRKG--------------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             ---HHHHHHHHcC--------------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence               1111111100              000112244678999999999999999999999998763

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.83  E-value=1.4e-20  Score=132.36  Aligned_cols=130  Identities=21%  Similarity=0.344  Sum_probs=91.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............+++.|++||.+.+..++.++|+||||++++++++ |..||......+
T Consensus       270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~  349 (401)
T cd05107         270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE  349 (401)
T ss_pred             EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence            5778889999999999986533222112223346788999999888788899999999999999997 888876432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                      . ....+..    ..        ..     ..+...+..+.+++.+||+.+|.+||++.+|++.|+++.
T Consensus       350 ~-~~~~~~~----~~--------~~-----~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         350 Q-FYNAIKR----GY--------RM-----AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             H-HHHHHHc----CC--------CC-----CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            1 0000100    00        00     011234567899999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.83  E-value=2.3e-20  Score=128.75  Aligned_cols=132  Identities=23%  Similarity=0.376  Sum_probs=92.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............++..|+|||++.+..++.++|+||||++++++++ |..||...... 
T Consensus       165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-  243 (334)
T cd05100         165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-  243 (334)
T ss_pred             EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence            5788899999999999987643222211222234567999999988888899999999999999998 77887543211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                          ..........         .     ...+..++..+.+++.+||+.+|.+|||+.+++..|+++...-
T Consensus       244 ----~~~~~~~~~~---------~-----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~  297 (334)
T cd05100         244 ----ELFKLLKEGH---------R-----MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT  297 (334)
T ss_pred             ----HHHHHHHcCC---------C-----CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence                1111100000         0     0011234557889999999999999999999999999988543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00284 protein kinase; Provisional

Probab=99.83  E-value=1.5e-20  Score=134.91  Aligned_cols=128  Identities=16%  Similarity=0.101  Sum_probs=80.4

Q ss_pred             ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHH
Q 035782            8 VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVN   87 (159)
Q Consensus         8 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~   87 (159)
                      .+||+|||.+.....     ..+..+||+.|+|||++.+..++.++||||+||++|++++|+.||......  .....+.
T Consensus       286 ~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~--~~~~~i~  358 (467)
T PTZ00284        286 RVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL--EHLHLME  358 (467)
T ss_pred             eEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHH
Confidence            599999998754321     123357899999999999888999999999999999999999999653221  1111111


Q ss_pred             hhcC------------Ccccchhhhh--ccc--cch-------hh-hhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           88 KSLS------------GELTQVIDAN--LAR--DEQ-------SF-FVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        88 ~~~~------------~~~~~~~~~~--~~~--~~~-------~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ....            .....+....  +..  .+.       .. .........+.+++.+||+.||.+|||+.|+++
T Consensus       359 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        359 KTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             HHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence            1000            0000000000  000  000       00 000012345789999999999999999999985

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.83  E-value=4e-21  Score=124.85  Aligned_cols=123  Identities=24%  Similarity=0.260  Sum_probs=88.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC------CCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS------EGIVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~------~~~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      ||++++..+||+|||+++.+..++.   ....||||+|+|||.+.      ..+|+..+|.|++|+++|.++.|.+||-.
T Consensus       154 ILlddn~~i~isDFGFa~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwH  230 (411)
T KOG0599|consen  154 ILLDDNMNIKISDFGFACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWH  230 (411)
T ss_pred             eeeccccceEEeccceeeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhH
Confidence            7899999999999999998865443   34578999999999753      23688899999999999999999999843


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      -.-  +-+...+....    -          .-..+...+......+|+.+|++.||.+|.|++|+|+
T Consensus       231 RkQ--mlMLR~ImeGk----y----------qF~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  231 RKQ--MLMLRMIMEGK----Y----------QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             HHH--HHHHHHHHhcc----c----------ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            110  00000010000    0          0011122366778899999999999999999999984

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.83  E-value=5.9e-21  Score=122.02  Aligned_cols=132  Identities=20%  Similarity=0.237  Sum_probs=91.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-------cccccccccccccccccCC---CccccchhhHhHHHHHHHHHhcCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-------TQTMTMATIGYMAPEYGSE---GIVSTKCDVYSYGVLLMETFTRKK   70 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~gt~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~~~~   70 (159)
                      ||+.+++.+++.|||.+....-.....       -......|..|.|||.+.-   .-.+.++||||+||++|.++.|..
T Consensus       160 ILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~s  239 (302)
T KOG2345|consen  160 ILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGES  239 (302)
T ss_pred             eEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCC
Confidence            577788999999999987653211111       1223457889999997543   346789999999999999999999


Q ss_pred             CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           71 PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        71 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                      ||+..+....++.           -.+..+.+. .+    ...-.++.+.+++..|++.||.+||++.+++..++.+.
T Consensus       240 Pfe~~~~~GgSla-----------LAv~n~q~s-~P----~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  240 PFERIYQQGGSLA-----------LAVQNAQIS-IP----NSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             cchHHhhcCCeEE-----------Eeeeccccc-cC----CCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            9986543221110           011111111 11    11135678999999999999999999999999988763

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.83  E-value=2.2e-20  Score=124.59  Aligned_cols=126  Identities=26%  Similarity=0.419  Sum_probs=88.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........ ........+..|++||+..+..++.++|+||||++++++++ |..||...... 
T Consensus       134 il~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-  211 (261)
T cd05068         134 VLVGENNICKVADFGLARVIKEDIY-EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-  211 (261)
T ss_pred             EEEcCCCCEEECCcceEEEccCCcc-cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence            5788899999999999987642211 11111223457999999888888999999999999999998 88888643211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                       .....+....    .             .+.+...+..+.+++.+||+.+|.+||++.++++.|++
T Consensus       212 -~~~~~~~~~~----~-------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         212 -EVLQQVDQGY----R-------------MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             -HHHHHHHcCC----C-------------CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence             1111110000    0             00112345678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.83  E-value=7.8e-21  Score=129.00  Aligned_cols=133  Identities=24%  Similarity=0.333  Sum_probs=88.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh--cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--~~~p~~~~~~~   78 (159)
                      |+++.++.++|+|||++..+.........+...++..|++||......++.++|+||||++++++++  +..||......
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~  240 (296)
T cd05095         161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE  240 (296)
T ss_pred             EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence            5788899999999999976543222222222344667999998777788999999999999999997  66777543221


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                      ..  ...............    .      .+.+..++..+.+++..||+.||.+||++.+|++.|+
T Consensus       241 ~~--~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         241 QV--IENTGEFFRDQGRQV----Y------LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HH--HHHHHHHHhhccccc----c------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            11  000000000000000    0      0111234567899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.83  E-value=1e-20  Score=125.92  Aligned_cols=127  Identities=24%  Similarity=0.381  Sum_probs=89.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||++......... .......++..|++||+..+..++.++|+||+|++++++++ |..||......
T Consensus       128 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  207 (257)
T cd05040         128 ILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS  207 (257)
T ss_pred             EEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            57888899999999999876432221 11122346778999999888888899999999999999998 99998543211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                      +  ....+... .               .....+...+..+.+++.+||+.+|++||++.+++..|.
T Consensus       208 ~--~~~~~~~~-~---------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         208 Q--ILKKIDKE-G---------------ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             H--HHHHHHhc-C---------------CcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            1  11111100 0               000011234567889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.83  E-value=2.5e-21  Score=132.95  Aligned_cols=120  Identities=20%  Similarity=0.212  Sum_probs=86.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++.......  ......||+.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       126 Ill~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--  201 (323)
T cd05571         126 LMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--  201 (323)
T ss_pred             EEECCCCCEEEeeCCCCcccccCCC--cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--
Confidence            6888999999999999875422111  123356899999999998888999999999999999999999998642211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                         ...........               ..+......+.+++.+||+.||.+||     ++.++++
T Consensus       202 ---~~~~~~~~~~~---------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         202 ---KLFELILMEEI---------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             ---HHHHHHHcCCC---------------CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence               11111000000               00113455688999999999999999     7888874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.83  E-value=2.3e-20  Score=125.64  Aligned_cols=132  Identities=23%  Similarity=0.337  Sum_probs=92.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............++..|++||......++.++|+||||++++++++ |..||......+
T Consensus       140 il~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  219 (279)
T cd05057         140 VLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE  219 (279)
T ss_pred             EEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence            5778889999999999987643322222222224567999998887788899999999999999998 999986532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                        ....+....                 ..+.+..+...+..++.+||..+|++||++.++++.|.++.++.
T Consensus       220 --~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05057         220 --IPDLLEKGE-----------------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP  272 (279)
T ss_pred             --HHHHHhCCC-----------------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence              111111100                 00111123456888999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.83  E-value=2.1e-20  Score=125.11  Aligned_cols=127  Identities=20%  Similarity=0.303  Sum_probs=89.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+|++|||.+......... ......++..|+|||++.+..++.++|+||+|++++++++ |..||.......
T Consensus       138 ili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~  216 (266)
T cd05064         138 VLVNSDLVCKISGFRRLQEDKSEAIY-TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD  216 (266)
T ss_pred             EEEcCCCcEEECCCcccccccccchh-cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence            57888999999999987654221111 1112234678999999888889999999999999999775 999986532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                        ....+....                 ..+.+..++..+.+++..||+.+|++||++.++++.|+++
T Consensus       217 --~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         217 --VIKAVEDGF-----------------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             --HHHHHHCCC-----------------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence              111111000                 0011234566789999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.83  E-value=2.4e-20  Score=123.83  Aligned_cols=126  Identities=27%  Similarity=0.392  Sum_probs=85.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++................++..|+|||.+.+..++.++|+||+|++++++++ |..||...... 
T Consensus       125 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~-  203 (252)
T cd05084         125 CLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ-  203 (252)
T ss_pred             EEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH-
Confidence            5778889999999999876432211111111123456999999888888899999999999999997 88887542211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                       ...........            .     ..+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus       204 -~~~~~~~~~~~------------~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         204 -QTREAIEQGVR------------L-----PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             -HHHHHHHcCCC------------C-----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence             11111110000            0     011234567899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.83  E-value=3.1e-20  Score=126.00  Aligned_cols=133  Identities=23%  Similarity=0.314  Sum_probs=87.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh--cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||++............+...++..|+|||+..+..++.++|+||||++++++++  +..||......
T Consensus       160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~  239 (295)
T cd05097         160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE  239 (295)
T ss_pred             EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence            5788889999999999976543322222233345678999999888888999999999999999987  55666542211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                      .  ................    ...      .+...+..+.+++.+||..||++|||+.+|++.|+
T Consensus       240 ~--~~~~~~~~~~~~~~~~----~~~------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         240 Q--VIENTGEFFRNQGRQI----YLS------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             H--HHHHHHHhhhhccccc----cCC------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            1  1110000000000000    000      01124567999999999999999999999998886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.83  E-value=2.3e-20  Score=126.26  Aligned_cols=129  Identities=21%  Similarity=0.372  Sum_probs=90.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............++..|++||.+.+..++.++|+||||++++++++ |..||......+
T Consensus       150 ili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~  229 (288)
T cd05061         150 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ  229 (288)
T ss_pred             EEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            5788899999999999886543222222222345667999999888788899999999999999998 677875432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                        ....+   .....        ..      .+...+..+.+++.+||+.||++|||+.++++.|++..
T Consensus       230 --~~~~~---~~~~~--------~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         230 --VLKFV---MDGGY--------LD------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             --HHHHH---HcCCC--------CC------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence              11111   00000        00      01133567999999999999999999999998888754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.83  E-value=2.5e-20  Score=124.81  Aligned_cols=126  Identities=25%  Similarity=0.415  Sum_probs=87.4

Q ss_pred             CccCCCC-----ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcc
Q 035782            1 ILLDEDM-----VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDE   74 (159)
Q Consensus         1 ili~~~~-----~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~   74 (159)
                      |+++.++     .+|++|||++................++..|++||++.+..++.++|+||||++++++++ |..||..
T Consensus       137 il~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~  216 (269)
T cd05044         137 CLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPA  216 (269)
T ss_pred             EEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcc
Confidence            4556555     899999999976543322222222345678999999988888999999999999999997 8888864


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                      ...  ......+..   ..              ....+...+..+.+++.+||..+|++||++.++++.|+
T Consensus       217 ~~~--~~~~~~~~~---~~--------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         217 LNN--QEVLQHVTA---GG--------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             cCH--HHHHHHHhc---CC--------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            321  111111100   00              00011245667899999999999999999999999886

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.83  E-value=1.5e-20  Score=126.04  Aligned_cols=126  Identities=29%  Similarity=0.400  Sum_probs=87.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++.....   .........+..|+|||+..+..++.++|+||||++++++++ |..||.....  
T Consensus       143 ili~~~~~~kl~dfgl~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--  217 (270)
T cd05047         143 ILVGENYVAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--  217 (270)
T ss_pred             EEEcCCCeEEECCCCCccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH--
Confidence            5788899999999999853211   111111223557999999888788899999999999999996 8899854321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                         ..........         ...     ..+...+..+.+++.+||+.+|.+|||+.++++.|+++.
T Consensus       218 ---~~~~~~~~~~---------~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         218 ---AELYEKLPQG---------YRL-----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             ---HHHHHHHhCC---------CCC-----CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence               1111111000         000     001123456889999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.83  E-value=2.2e-20  Score=124.49  Aligned_cols=128  Identities=25%  Similarity=0.416  Sum_probs=89.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||++.......... ......++..|+|||.+....++.++|+||||++++++++ |..||......
T Consensus       126 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~  205 (257)
T cd05115         126 VLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP  205 (257)
T ss_pred             EEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence            577888999999999997653322211 1111223567999999887788899999999999999996 89998654221


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                      +  ....+....            ..     ..+..+++.+.+++.+||..+|++||++.++.+.|+++
T Consensus       206 ~--~~~~~~~~~------------~~-----~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         206 E--VMSFIEQGK------------RL-----DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             H--HHHHHHCCC------------CC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            1  111111110            00     01123467888999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.83  E-value=2.3e-20  Score=131.26  Aligned_cols=143  Identities=19%  Similarity=0.114  Sum_probs=90.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc-
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE-   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~-   79 (159)
                      ||++.++.+||+|||+++...............||+.|+|||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       216 ill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~  295 (392)
T PHA03207        216 IFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSS  295 (392)
T ss_pred             EEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCc
Confidence            5788999999999999977643332222234568999999999988889999999999999999999999986543221 


Q ss_pred             -ccHHHHHHhhcCC--c-----ccchhh---hhc-cccc----hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           80 -MSLRDWVNKSLSG--E-----LTQVID---ANL-ARDE----QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        80 -~~~~~~~~~~~~~--~-----~~~~~~---~~~-~~~~----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                       ..+...+......  .     ...+..   ... ...+    ............+..++.+||..||.+|||+.+++..
T Consensus       296 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        296 SSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             HHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence             1111111110000  0     000000   000 0000    0000011234567789999999999999999999853

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.83  E-value=1.3e-20  Score=126.32  Aligned_cols=122  Identities=19%  Similarity=0.218  Sum_probs=83.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      |+++.++.+||+|||++.......  .......|+..|+|||++.     ...++.++|+||+|++++++++|..||...
T Consensus       142 ili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~  219 (272)
T cd06637         142 VLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM  219 (272)
T ss_pred             EEECCCCCEEEccCCCceeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            578889999999999987653221  1223356888999999875     235778899999999999999999998543


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ....    .... ........             ......+..+.+++.+||..||.+|||+.++++
T Consensus       220 ~~~~----~~~~-~~~~~~~~-------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         220 HPMR----ALFL-IPRNPAPR-------------LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             CHHH----HHHH-HhcCCCCC-------------CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            2111    0000 00000000             001133456889999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.83  E-value=4.4e-20  Score=123.75  Aligned_cols=130  Identities=22%  Similarity=0.348  Sum_probs=92.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++........ ..+...++..|+|||......++.++|+||+|++++++++ |..||.......
T Consensus       138 ili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~  216 (270)
T cd05056         138 VLVSSPDCVKLGDFGLSRYLEDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND  216 (270)
T ss_pred             EEEecCCCeEEccCceeeecccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence            57788899999999999876433211 1122234567999999887788899999999999999886 999986532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                        ....+....                 ....+..++..+.+++.+||..+|++|||+.+++..|+++..+
T Consensus       217 --~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         217 --VIGRIENGE-----------------RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             --HHHHHHcCC-----------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence              111111000                 0001124456789999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.83  E-value=2.2e-20  Score=126.24  Aligned_cols=138  Identities=20%  Similarity=0.205  Sum_probs=88.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||+++......   ......|+..|+|||++.+..++.++|+||+|++++++++|..+|......+ 
T Consensus       139 ili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-  214 (288)
T cd07863         139 ILVTSGGQVKLADFGLARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-  214 (288)
T ss_pred             EEECCCCCEEECccCccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-
Confidence            578899999999999998764222   1223457889999999988888999999999999999999999986432211 


Q ss_pred             cHHHHHHhh---cCCcccchh---hhhccccch--hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKS---LSGELTQVI---DANLARDEQ--SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~---~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .........   ....+....   .........  ...........+.+++.+|++.||.+|||+.+++.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         215 QLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             HHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            111111100   000000000   000000000  00111234566889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.83  E-value=2.5e-20  Score=125.00  Aligned_cols=128  Identities=24%  Similarity=0.392  Sum_probs=89.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............+++.|++||...+..++.++|+||+|++++++++ |..||.....  
T Consensus       144 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--  221 (273)
T cd05074         144 CMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--  221 (273)
T ss_pred             EEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--
Confidence            5778899999999999886543222211222335567999999888788889999999999999998 7888764321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                      .....++....  .   .            ..+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus       222 ~~~~~~~~~~~--~---~------------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         222 SEIYNYLIKGN--R---L------------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHHHHHHcCC--c---C------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            11111111100  0   0            00113456789999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.83  E-value=3e-20  Score=125.74  Aligned_cols=137  Identities=16%  Similarity=0.135  Sum_probs=86.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.......  ......+++.|+|||++.+ ..++.++|+||+|++++++++|..||......+
T Consensus       134 il~~~~~~~kl~DfG~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~  211 (288)
T cd07871         134 LLINEKGELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE  211 (288)
T ss_pred             EEECCCCCEEECcCcceeeccCCCc--cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            5788999999999999976532221  1233457889999998765 467889999999999999999999997533211


Q ss_pred             ccHHHHHHhhcC----Ccccch---------hhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS----GELTQV---------IDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~----~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  ...+.....    ..+..+         ..+.....+. ............+++.+|++.||.+|||+.|+++
T Consensus       212 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         212 E--LHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPL-INHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             H--HHHHHHHhCCCChHHhhccccchhhhccccCccCCCch-HHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            1  111111010    001110         0000000000 0001123456789999999999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.83  E-value=3e-20  Score=123.88  Aligned_cols=126  Identities=27%  Similarity=0.460  Sum_probs=88.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.++|+|||++..+...... ......++..|+|||...+..++.++|+||||++++++++ |..||...... 
T Consensus       133 ili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-  210 (260)
T cd05070         133 ILVGDGLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-  210 (260)
T ss_pred             EEEeCCceEEeCCceeeeeccCcccc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence            57788899999999999876432221 1122235567999999887788899999999999999998 88888643211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                       .....+.....                 .+.+...+..+.+++.+||..+|++|||+.++...|++
T Consensus       211 -~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         211 -EVLEQVERGYR-----------------MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             -HHHHHHHcCCC-----------------CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence             11111110000                 01112445679999999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.83  E-value=1.6e-20  Score=124.52  Aligned_cols=126  Identities=29%  Similarity=0.450  Sum_probs=87.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++................++..|++||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       124 ili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~  203 (251)
T cd05041         124 CLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ  203 (251)
T ss_pred             EEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH
Confidence            5788899999999999876532211111111223556999999888788899999999999999998 778875432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                        ....+....            .     ...+...+..+.+++.+||..+|.+|||+.|+++.|+
T Consensus       204 --~~~~~~~~~------------~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         204 --TRERIESGY------------R-----MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             --HHHHHhcCC------------C-----CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence              111111000            0     0011234567999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.83  E-value=3.6e-20  Score=123.98  Aligned_cols=128  Identities=27%  Similarity=0.451  Sum_probs=89.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccc-cccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQ-TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~-~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||++............ .....+..|++||+..+..++.++|+||+|++++++++ |..||......
T Consensus       138 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~  217 (268)
T cd05063         138 ILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH  217 (268)
T ss_pred             EEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH
Confidence            57788999999999999766432221111 11223457999999887788899999999999999987 99998543211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                        .....+..   .        .      ..+.+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus       218 --~~~~~i~~---~--------~------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         218 --EVMKAIND---G--------F------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             --HHHHHHhc---C--------C------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence              11111110   0        0      0001123456789999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.83  E-value=4.1e-21  Score=135.84  Aligned_cols=119  Identities=18%  Similarity=0.283  Sum_probs=87.3

Q ss_pred             CccC-CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+|+ .-|.|||+|+|+|...+..    +...++|||.|||||.+- ..|+..+||||||+++.||+++..||..+....
T Consensus       176 IFinG~~G~VKIGDLGLAtl~r~s----~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A  250 (632)
T KOG0584|consen  176 IFVNGNLGEVKIGDLGLATLLRKS----HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA  250 (632)
T ss_pred             EEEcCCcCceeecchhHHHHhhcc----ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH
Confidence            3455 4489999999999887422    223378999999999886 689999999999999999999999987765433


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..+...+....+..+..+                 ..+.+.+++.+|+.. .++|+|+.|+|+
T Consensus       251 QIYKKV~SGiKP~sl~kV-----------------~dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  251 QIYKKVTSGIKPAALSKV-----------------KDPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             HHHHHHHcCCCHHHhhcc-----------------CCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence            333322221111111111                 134688999999999 999999999985

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.83  E-value=1.2e-20  Score=127.21  Aligned_cols=123  Identities=24%  Similarity=0.228  Sum_probs=83.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      |+++.++.+||+|||++.......  .......++..|++||++.     +..++.++|+||+|++++++++|..||...
T Consensus       134 ili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~  211 (282)
T cd06643         134 ILFTLDGDIKLADFGVSAKNTRTI--QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL  211 (282)
T ss_pred             EEEccCCCEEEccccccccccccc--cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcccc
Confidence            577889999999999987653211  1223345788999999874     334677899999999999999999998653


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..... ... .....               ......+...+..+.+++.+||+.||++||++.++++
T Consensus       212 ~~~~~-~~~-~~~~~---------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         212 NPMRV-LLK-IAKSE---------------PPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             CHHHH-HHH-HhhcC---------------CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            21110 000 00000               0000111234567899999999999999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.82  E-value=3.6e-20  Score=123.25  Aligned_cols=124  Identities=22%  Similarity=0.348  Sum_probs=85.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||.++........ ......++..|+|||+..+..++.++|+||||++++++++ |..||.....  
T Consensus       131 i~i~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--  207 (256)
T cd05114         131 CLVSSTGVVKVSDFGMTRYVLDDEYT-SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--  207 (256)
T ss_pred             EEEcCCCeEEECCCCCccccCCCcee-ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--
Confidence            46788899999999998765322211 1122234567999999888888899999999999999999 8888854321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                      ......+.....           ..      .+...+..+.+++.+||..+|++||++.++++.|
T Consensus       208 ~~~~~~i~~~~~-----------~~------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         208 YEVVEMISRGFR-----------LY------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHHHHHCCCC-----------CC------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            111111111000           00      0112235689999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.82  E-value=4e-20  Score=123.54  Aligned_cols=127  Identities=28%  Similarity=0.455  Sum_probs=89.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||.++.+...... ......++..|++||+..+..++.++|+||+|++++++++ |..||.......
T Consensus       133 ill~~~~~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~  211 (262)
T cd05071         133 ILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE  211 (262)
T ss_pred             EEEcCCCcEEeccCCceeeccccccc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH
Confidence            57788899999999999876433221 1122345667999999887788999999999999999999 777875432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                           ........ ..             .+.+...+..+.+++.+||+.||++||++.++++.|+..
T Consensus       212 -----~~~~~~~~-~~-------------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         212 -----VLDQVERG-YR-------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             -----HHHHHhcC-CC-------------CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence                 11100000 00             001124556789999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.82  E-value=8.8e-21  Score=130.25  Aligned_cols=120  Identities=23%  Similarity=0.259  Sum_probs=85.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++.......  ......|++.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       131 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~--  206 (323)
T cd05584         131 ILLDAQGHVKLTDFGLCKESIHEGT--VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK--  206 (323)
T ss_pred             eEECCCCCEEEeeCcCCeecccCCC--cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH--
Confidence            6788999999999999875432221  122346899999999998888889999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                         ..........        .       ..+......+.+++.+||+.||++||     ++.+++.
T Consensus       207 ---~~~~~~~~~~--------~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         207 ---KTIDKILKGK--------L-------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             ---HHHHHHHcCC--------C-------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence               1111111000        0       01113345688999999999999999     7888775

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.82  E-value=2.6e-20  Score=124.06  Aligned_cols=125  Identities=22%  Similarity=0.330  Sum_probs=86.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||.++....... .......++..|++||...+..++.++|+||||++++++++ |..||.......
T Consensus       131 ili~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~  209 (256)
T cd05113         131 CLVDDQGCVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE  209 (256)
T ss_pred             EEEcCCCCEEECCCccceecCCCce-eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence            5778889999999999876533221 11112235567999999887788899999999999999998 888876432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                        ....+......           .      .+...+..+.+++..||+.+|.+||++.++++.|+
T Consensus       210 --~~~~~~~~~~~-----------~------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         210 --TVEKVSQGLRL-----------Y------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             --HHHHHhcCCCC-----------C------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence              11111110000           0      01123467899999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.82  E-value=2.4e-20  Score=125.00  Aligned_cols=130  Identities=20%  Similarity=0.283  Sum_probs=83.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-------ccccchhhHhHHHHHHHHHh-cCCCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-------IVSTKCDVYSYGVLLMETFT-RKKPT   72 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-------~~~~~~dv~s~g~~~~~~~~-~~~p~   72 (159)
                      |+++.++.+||+|||++................++..|+|||++...       .++.++|+||||++++++++ |..||
T Consensus       131 il~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~  210 (269)
T cd05087         131 CLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPY  210 (269)
T ss_pred             EEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCC
Confidence            56788899999999998754332222222334567789999987532       34678999999999999996 99998


Q ss_pred             cccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           73 DEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                      ........  ....   +.........+.+.         ......+.+++..|| .+|++|||+.+|++.|.
T Consensus       211 ~~~~~~~~--~~~~---~~~~~~~~~~~~~~---------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         211 RHLSDEQV--LTYT---VREQQLKLPKPRLK---------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCChHHH--HHHH---hhcccCCCCCCccC---------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            65332211  0000   10100111111111         012345777999999 68999999999998774

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=3.6e-21  Score=131.58  Aligned_cols=119  Identities=24%  Similarity=0.244  Sum_probs=84.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++......  .......||+.|+|||++.+..++.++|+||+|++++++++|..||.....   
T Consensus       124 ili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~---  198 (312)
T cd05585         124 ILLDYQGHIALCDFGLCKLNMKDD--DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV---  198 (312)
T ss_pred             eEECCCCcEEEEECcccccCccCC--CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH---
Confidence            678899999999999987542221  122335689999999999888899999999999999999999999864321   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc---HHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY---MTDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt---~~~ll  141 (159)
                        ...........        .       ..+......+.+++.+||..||.+||+   +.+++
T Consensus       199 --~~~~~~~~~~~--------~-------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l  245 (312)
T cd05585         199 --NEMYRKILQEP--------L-------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK  245 (312)
T ss_pred             --HHHHHHHHcCC--------C-------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence              11111111100        0       011234457889999999999999975   56665

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.82  E-value=3.1e-20  Score=123.34  Aligned_cols=138  Identities=21%  Similarity=0.184  Sum_probs=92.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      +|+.+.|.+||+|||+|+.+++.  ....+..+-|.+|+|||.+.+. .|+.+.|+||+||++.|++.+.+.|.+..  +
T Consensus       208 LLm~~~G~lKiaDFGLAR~ygsp--~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s--E  283 (419)
T KOG0663|consen  208 LLLSHKGILKIADFGLAREYGSP--LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS--E  283 (419)
T ss_pred             eeeccCCcEEecccchhhhhcCC--cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc--h
Confidence            57889999999999999998644  2334556679999999998877 58999999999999999999999887632  2


Q ss_pred             ccHHHHHHhhcC----Ccccchhh-hh-----ccccch--hhhhchH--HHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS----GELTQVID-AN-----LARDEQ--SFFVKMD--CLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~----~~~~~~~~-~~-----~~~~~~--~~~~~~~--~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ......+.+...    ..|..+-. +.     ....++  .+.....  .....++++...+.+||.+|.|++|.|+
T Consensus       284 ~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  284 IDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             HHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence            222222222211    11111111 00     001111  0001111  2367889999999999999999999874

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.82  E-value=1.9e-20  Score=129.07  Aligned_cols=70  Identities=29%  Similarity=0.374  Sum_probs=58.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      ||++.++.+||+|||++.......    .....|+..|+|||++.+..++.++|+||+|++++++++|..||..
T Consensus       135 ili~~~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         135 ILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             EEEcCCCCEEEeeCCcchhhhhhc----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            578889999999999987653211    1234588899999999888888999999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.82  E-value=8.4e-20  Score=125.02  Aligned_cols=71  Identities=18%  Similarity=0.233  Sum_probs=55.6

Q ss_pred             CCCCceEEcccccceecCCCCC-cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            4 DEDMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         4 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      +.++.+||+|||+++.+..... ........||+.|+|||++.+. .++.++|+||+|++++++++|..||..
T Consensus       146 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         146 PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             CCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence            4567899999999987643221 1122345689999999988764 578899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.82  E-value=6.3e-20  Score=122.39  Aligned_cols=126  Identities=27%  Similarity=0.440  Sum_probs=89.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.++|+|||++......... ......++..|++||+..+..++.++|+||+|++++++++ |..||.......
T Consensus       133 ill~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  211 (260)
T cd05069         133 ILVGDNLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE  211 (260)
T ss_pred             EEEcCCCeEEECCCccceEccCCccc-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            57888999999999999776432211 1122335677999998887788899999999999999998 888886532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                        ....+......                 +.+...+..+.+++.+||..||.+||++.++++.|++
T Consensus       212 --~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         212 --VLEQVERGYRM-----------------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             --HHHHHHcCCCC-----------------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence              11111110000                 0112345678999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.82  E-value=1.3e-20  Score=129.54  Aligned_cols=120  Identities=18%  Similarity=0.206  Sum_probs=84.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++.......  .......|++.|+|||.+.+..++.++|+||+|++++++++|..||......  
T Consensus       132 ill~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--  207 (324)
T cd05589         132 LLLDTEGFVKIADFGLCKEGMGFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--  207 (324)
T ss_pred             eEECCCCcEEeCcccCCccCCCCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--
Confidence            678999999999999987532211  1223456899999999998888899999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                         ..........        .       ..+...+..+.+++.+||+.||++||     ++.++++
T Consensus       208 ---~~~~~i~~~~--------~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         208 ---EVFDSIVNDE--------V-------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             ---HHHHHHHhCC--------C-------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence               1111100000        0       00113345678899999999999999     5666664

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.82  E-value=4e-20  Score=129.89  Aligned_cols=141  Identities=18%  Similarity=0.106  Sum_probs=87.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc--c
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI--G   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~--~   78 (159)
                      ||++.++.+||+|||+++...... ........||+.|+|||++.+..++.++|+||+|++++++++|..||-....  +
T Consensus       213 Ill~~~~~vkL~DFG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~  291 (391)
T PHA03212        213 IFINHPGDVCLGDFGAACFPVDIN-ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDG  291 (391)
T ss_pred             EEEcCCCCEEEEeCCccccccccc-ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccc
Confidence            578889999999999997542211 1122335689999999999888899999999999999999999977643211  0


Q ss_pred             c----ccHHHHHHhhcC--Cc----ccchhhh-------hccccchhh---hhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782           79 E----MSLRDWVNKSLS--GE----LTQVIDA-------NLARDEQSF---FVKMDCLSSIMHLALDCCMESPDQRIYMT  138 (159)
Q Consensus        79 ~----~~~~~~~~~~~~--~~----~~~~~~~-------~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  138 (159)
                      .    ......+.....  ..    ....++.       .....+..+   ......+..+.+++.+||+.||.+|||+.
T Consensus       292 ~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~  371 (391)
T PHA03212        292 DCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAE  371 (391)
T ss_pred             cCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHH
Confidence            0    011111111000  00    0000000       000000000   01123456788999999999999999999


Q ss_pred             HHHH
Q 035782          139 DAAA  142 (159)
Q Consensus       139 ~ll~  142 (159)
                      |+++
T Consensus       372 elL~  375 (391)
T PHA03212        372 ALLD  375 (391)
T ss_pred             HHhc
Confidence            9984

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.82  E-value=2.8e-20  Score=125.18  Aligned_cols=126  Identities=26%  Similarity=0.408  Sum_probs=84.8

Q ss_pred             CccCCCC---ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccc
Q 035782            1 ILLDEDM---VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~   76 (159)
                      |+++.++   .+||+|||+++................+..|+|||++.+..++.++|+||+|++++++++ |..||....
T Consensus       147 il~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~  226 (277)
T cd05036         147 CLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT  226 (277)
T ss_pred             EEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            3555443   689999999986532221111112223567999999988889999999999999999996 888886532


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                      ...  ....+....            ...     .+...+..+.+++.+||+.+|++||++.+|++.|+
T Consensus       227 ~~~--~~~~~~~~~------------~~~-----~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         227 NQE--VMEFVTGGG------------RLD-----PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HHH--HHHHHHcCC------------cCC-----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            211  111111000            000     01234567889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.82  E-value=4.8e-20  Score=122.72  Aligned_cols=124  Identities=26%  Similarity=0.412  Sum_probs=86.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...+.... ......++..|+|||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       131 i~i~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  209 (256)
T cd05059         131 CLVGEDNVVKVSDFGLARYVLDDQYT-SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE  209 (256)
T ss_pred             EEECCCCcEEECCcccceeccccccc-ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence            57888999999999999765422211 1111223457999999888888899999999999999998 788886432211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                        .........    .             ...+...+..+.+++.+||+.+|++|||+.++++.|
T Consensus       210 --~~~~~~~~~----~-------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         210 --VVESVSAGY----R-------------LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             --HHHHHHcCC----c-------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence              111111000    0             001123456799999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.82  E-value=2e-20  Score=127.41  Aligned_cols=130  Identities=28%  Similarity=0.367  Sum_probs=89.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||++.....   ........++..|++||+..+..++.++|+||||++++++++ |..||...... 
T Consensus       155 ili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-  230 (303)
T cd05088         155 ILVGENYVAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-  230 (303)
T ss_pred             EEecCCCcEEeCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-
Confidence            5788899999999999864311   111111223567999998877778899999999999999997 89998543211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                          ....... ..        ...     ..+...+..+.+++.+||+.+|++||++.+++..|+++.+.-.
T Consensus       231 ----~~~~~~~-~~--------~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~  285 (303)
T cd05088         231 ----ELYEKLP-QG--------YRL-----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  285 (303)
T ss_pred             ----HHHHHHh-cC--------CcC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence                1111100 00        000     0011234568899999999999999999999999998766543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.82  E-value=2.3e-20  Score=124.04  Aligned_cols=123  Identities=22%  Similarity=0.272  Sum_probs=86.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......++..|++||++.+..++.++|+||||++++++++|..||........
T Consensus       130 i~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~  207 (256)
T cd06612         130 ILLNEEGQAKLADFGVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA  207 (256)
T ss_pred             EEECCCCcEEEcccccchhcccCcc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh
Confidence            5678899999999999887643221  12234578889999998888888999999999999999999999864322110


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                          .... . .           ........+......+.+++.+||+.||++|||+.++++
T Consensus       208 ----~~~~-~-~-----------~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         208 ----IFMI-P-N-----------KPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             ----hhhh-c-c-----------CCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence                0000 0 0           000000011234457889999999999999999999885

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.82  E-value=1.2e-20  Score=129.28  Aligned_cols=119  Identities=22%  Similarity=0.262  Sum_probs=84.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++.......  .......||+.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       127 ill~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--  202 (316)
T cd05592         127 VLLDKDGHIKIADFGMCKENMNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--  202 (316)
T ss_pred             eEECCCCCEEEccCcCCeECCCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--
Confidence            678899999999999997643222  1223456899999999998888899999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH-HHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT-DAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~-~ll  141 (159)
                         .........            .+   ..+......+.+++.+||+.||++||++. +++
T Consensus       203 ---~~~~~i~~~------------~~---~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         203 ---ELFDSILND------------RP---HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             ---HHHHHHHcC------------CC---CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence               111110000            00   00112345678899999999999999875 454

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.82  E-value=3.6e-20  Score=123.43  Aligned_cols=138  Identities=21%  Similarity=0.172  Sum_probs=92.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++++|.+||+|||+|+.+.-...  ..+..++|.+|.|||++.+. .|+...|+||+||++.||++++..|.+...  
T Consensus       151 lLi~~~G~lKlaDFGlAra~~ip~~--~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se--  226 (323)
T KOG0594|consen  151 LLISSSGVLKLADFGLARAFSIPMR--TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE--  226 (323)
T ss_pred             EEECCCCcEeeeccchHHHhcCCcc--cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH--
Confidence            6899999999999999997652222  24557889999999998887 789999999999999999999998876432  


Q ss_pred             ccHHHHHHhhcC----Ccccchh---hhhc--cccchhhhhchH---HHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS----GELTQVI---DANL--ARDEQSFFVKMD---CLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~----~~~~~~~---~~~~--~~~~~~~~~~~~---~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ......+.....    ..|....   +...  ............   -.....+++.+|++++|.+|.|+..++.
T Consensus       227 ~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~  301 (323)
T KOG0594|consen  227 IDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT  301 (323)
T ss_pred             HHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence            111111111111    1222211   1100  000000000111   1147889999999999999999998875

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=3.7e-20  Score=123.55  Aligned_cols=125  Identities=22%  Similarity=0.148  Sum_probs=86.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.++|+|||++.......... ......++..|+|||.+.+..++.++|+||+|++++++++|..||...... 
T Consensus       135 ilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-  213 (263)
T cd06625         135 ILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM-  213 (263)
T ss_pred             EEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH-
Confidence            578888999999999987653211111 112345778899999998888889999999999999999999998643211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                          ............             ...+......+.+++.+||..+|.+|||+.++++.
T Consensus       214 ----~~~~~~~~~~~~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         214 ----AAIFKIATQPTN-------------PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             ----HHHHHHhccCCC-------------CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence                000000000000             00112345568889999999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.82  E-value=1.3e-20  Score=129.61  Aligned_cols=120  Identities=18%  Similarity=0.219  Sum_probs=85.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++......  .......||+.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       126 Ill~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--  201 (328)
T cd05593         126 LMLDKDGHIKITDFGLCKEGITDA--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--  201 (328)
T ss_pred             eEECCCCcEEEecCcCCccCCCcc--cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--
Confidence            688999999999999987542211  1223356899999999998888899999999999999999999998643211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                         ...........               ..+......+.+++.+||+.||.+|+     ++.++++
T Consensus       202 ---~~~~~~~~~~~---------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  250 (328)
T cd05593         202 ---KLFELILMEDI---------------KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR  250 (328)
T ss_pred             ---HHHHHhccCCc---------------cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence               11111000000               00113345688899999999999997     8888874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.82  E-value=3.7e-20  Score=124.91  Aligned_cols=142  Identities=23%  Similarity=0.350  Sum_probs=89.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCccc-ccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVT-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........... .....++..|++||+..+..++.++|+||+|+++++++++..++.....  
T Consensus       139 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--  216 (284)
T cd05081         139 ILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA--  216 (284)
T ss_pred             EEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch--
Confidence            5788899999999999987643222111 1112234469999998888888999999999999999998765432110  


Q ss_pred             ccHHHHHHhhcC--CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLS--GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                       ...........  .....+.+ .+. .....+.+...+..+.+++.+||..+|++|||+.++++.|+++
T Consensus       217 -~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         217 -EFMRMMGNDKQGQMIVYHLIE-LLK-NNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             -hhhhhcccccccccchHHHHH-HHh-cCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence             00000000000  00000000 000 0011111234566799999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.82  E-value=5.9e-20  Score=122.07  Aligned_cols=122  Identities=26%  Similarity=0.361  Sum_probs=87.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......|++.|+|||+..+..++.++|+||||++++++++|..||......  
T Consensus       132 ili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--  207 (256)
T cd08529         132 LFLDAYDNVKIGDLGVAKLLSDNTN--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--  207 (256)
T ss_pred             EEEeCCCCEEEcccccceeccCccc--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--
Confidence            5778889999999999987643322  122345788999999988888889999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      ..   ..........        .      .+...+..+.+++.+||+.+|++||++.++++.
T Consensus       208 ~~---~~~~~~~~~~--------~------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         208 AL---ILKIIRGVFP--------P------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HH---HHHHHcCCCC--------C------CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            11   1111100000        0      011344578999999999999999999998863

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.82  E-value=1.6e-20  Score=128.79  Aligned_cols=120  Identities=23%  Similarity=0.215  Sum_probs=85.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||+++.......  .....+|++.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       127 ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--  202 (318)
T cd05570         127 VLLDSEGHIKIADFGMCKEGILGGV--TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--  202 (318)
T ss_pred             eEECCCCcEEecccCCCeecCcCCC--cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--
Confidence            6788999999999999875322111  122346899999999998888999999999999999999999998643211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH-----HHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM-----TDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~-----~~ll~  142 (159)
                      .....+.   ...        .       ..+...+..+.+++.+||+.||.+||++     .+++.
T Consensus       203 ~~~~~i~---~~~--------~-------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         203 ELFQSIL---EDE--------V-------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HHHHHHH---cCC--------C-------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            1111110   000        0       0011234568899999999999999999     77764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.81  E-value=2.2e-20  Score=126.25  Aligned_cols=125  Identities=26%  Similarity=0.314  Sum_probs=85.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC---ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||++........   .....|+..|++||++.+.   .++.++|+||+|++++++++|..||.... 
T Consensus       139 il~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-  214 (288)
T cd06616         139 ILLDRNGNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-  214 (288)
T ss_pred             EEEccCCcEEEeecchhHHhccCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-
Confidence            5778889999999999976532221   1223578889999988765   57889999999999999999999986432 


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                         ..............     +.+...     .....+..+.+++.+||+.+|++|||+.++++
T Consensus       215 ---~~~~~~~~~~~~~~-----~~~~~~-----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         215 ---SVFDQLTQVVKGDP-----PILSNS-----EEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             ---hHHHHHhhhcCCCC-----CcCCCc-----CCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence               11111111111000     000000     01135567899999999999999999999985

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.81  E-value=1.3e-20  Score=129.24  Aligned_cols=115  Identities=22%  Similarity=0.242  Sum_probs=82.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++........  ......||+.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       127 Ili~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--  202 (320)
T cd05590         127 VLLDHEGHCKLADFGMCKEGIFNGK--TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--  202 (320)
T ss_pred             eEECCCCcEEEeeCCCCeecCcCCC--cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--
Confidence            6889999999999999876432211  223356899999999998888899999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                      .....+.   ...        .       ..+......+.+++.+||+.||.+||++
T Consensus       203 ~~~~~i~---~~~--------~-------~~~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         203 DLFEAIL---NDE--------V-------VYPTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHHHHHh---cCC--------C-------CCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence            1111111   000        0       0011234567899999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=1.6e-20  Score=127.25  Aligned_cols=117  Identities=21%  Similarity=0.207  Sum_probs=84.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++.......     ....|++.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       132 Ili~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--  204 (291)
T cd05612         132 ILLDKEGHIKLTDFGFAKKLRDRT-----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--  204 (291)
T ss_pred             eEECCCCCEEEEecCcchhccCCc-----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--
Confidence            678899999999999997653221     1246899999999998888899999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll~  142 (159)
                      .....+..   ..        . .      .+......+.+++.+||+.||.+|++     ++++++
T Consensus       205 ~~~~~i~~---~~--------~-~------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  253 (291)
T cd05612         205 GIYEKILA---GK--------L-E------FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN  253 (291)
T ss_pred             HHHHHHHh---CC--------c-C------CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence            11111100   00        0 0      01122456889999999999999995     888774

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.81  E-value=4e-20  Score=129.27  Aligned_cols=139  Identities=22%  Similarity=0.273  Sum_probs=87.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...... ....+...+++.|+|||++.+. .++.++|+||+||+++++++|+.||.......
T Consensus       134 ili~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  212 (372)
T cd07853         134 LLVNSNCVLKICDFGLARVEEPDE-SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ  212 (372)
T ss_pred             EEECCCCCEEeccccceeecccCc-cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH
Confidence            678999999999999998653222 1122334578899999988764 47889999999999999999999997533211


Q ss_pred             ccHHHHHHhhcC-Ccccc----------hhhhhccccch---hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS-GELTQ----------VIDANLARDEQ---SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~----------~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ....+..... .....          .+.......+.   ...........+.+++.+||+.||.+|||+.+++.
T Consensus       213 --~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         213 --QLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             --HHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence              1111111100 00000          00000000000   00011123567889999999999999999999985

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.81  E-value=8.4e-20  Score=122.32  Aligned_cols=128  Identities=27%  Similarity=0.484  Sum_probs=88.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccc---cccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTM---ATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~---gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~   76 (159)
                      |+++.++.+||+|||++................   .+..|++||++.+..++.++|+||+|++++++++ |..||....
T Consensus       137 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~  216 (269)
T cd05065         137 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS  216 (269)
T ss_pred             EEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC
Confidence            577888999999999987654322211111111   2357999999988888999999999999999885 888885432


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                      ..  .....+....                 ..+.+.+++..+.+++..||..+|++||++.+++..|+++
T Consensus       217 ~~--~~~~~i~~~~-----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         217 NQ--DVINAIEQDY-----------------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HH--HHHHHHHcCC-----------------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            11  1111111100                 0011124456788999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.81  E-value=4.3e-20  Score=125.44  Aligned_cols=123  Identities=16%  Similarity=0.176  Sum_probs=86.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......++..|++||.+.+..++.++|+||||++++++++|..||........
T Consensus       146 ili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~  223 (296)
T cd06655         146 VLLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA  223 (296)
T ss_pred             EEECCCCCEEEccCccchhcccccc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            5788899999999999876543221  12234578899999998888888999999999999999999999865322110


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ...........               ...+...+..+.+++.+||..||.+|||+.++++
T Consensus       224 --~~~~~~~~~~~---------------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         224 --LYLIATNGTPE---------------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             --HHHHHhcCCcc---------------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence              00010000000               0011234456888999999999999999999983

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.81  E-value=4.7e-20  Score=125.26  Aligned_cols=123  Identities=18%  Similarity=0.197  Sum_probs=86.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......+++.|+|||.+.+..++.++|+||||++++++++|..||....... 
T Consensus       147 ill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~-  223 (296)
T cd06654         147 ILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-  223 (296)
T ss_pred             EEEcCCCCEEECccccchhcccccc--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence            5788899999999999876532221  1223457889999999888778899999999999999999999986432211 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                         .+....... ...     +       ..+......+.+++.+||..+|++|||+.+++.
T Consensus       224 ---~~~~~~~~~-~~~-----~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         224 ---ALYLIATNG-TPE-----L-------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             ---hHHHHhcCC-CCC-----C-------CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence               111000000 000     0       001234456888999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.81  E-value=1.2e-20  Score=129.87  Aligned_cols=116  Identities=24%  Similarity=0.217  Sum_probs=83.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++.......     ....|++.|+|||++.+..++.++|+||+|++++++++|..||.....   
T Consensus       149 Ill~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~---  220 (329)
T PTZ00263        149 LLLDNKGHVKVTDFGFAKKVPDRT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP---  220 (329)
T ss_pred             EEECCCCCEEEeeccCceEcCCCc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH---
Confidence            688999999999999998764321     124689999999999888889999999999999999999999864221   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll  141 (159)
                        ...........        +.       .+......+.+++.+||+.||.+|++     +.+++
T Consensus       221 --~~~~~~i~~~~--------~~-------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll  269 (329)
T PTZ00263        221 --FRIYEKILAGR--------LK-------FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVK  269 (329)
T ss_pred             --HHHHHHHhcCC--------cC-------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence              11111111000        00       01123346788999999999999997     57776

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.81  E-value=2.1e-20  Score=128.39  Aligned_cols=120  Identities=20%  Similarity=0.222  Sum_probs=85.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++........  ......|++.|+|||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       126 Ill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-  202 (323)
T cd05595         126 LMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-  202 (323)
T ss_pred             EEEcCCCCEEecccHHhccccCCCC--ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH-
Confidence            6788999999999999875322111  1223568999999999988888999999999999999999999986432111 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                          ..........        .       .+......+.+++.+||+.||.+|+     ++.++++
T Consensus       203 ----~~~~~~~~~~--------~-------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         203 ----LFELILMEEI--------R-------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             ----HHHHHhcCCC--------C-------CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence                1110000000        0       0113455788999999999999998     7888774

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.81  E-value=7.6e-20  Score=126.56  Aligned_cols=135  Identities=21%  Similarity=0.203  Sum_probs=85.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.....     .....|++.|+|||++.+ ..++.++|+||+|++++++++|..||......+
T Consensus       149 il~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  223 (343)
T cd07878         149 VAVNEDCELRILDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID  223 (343)
T ss_pred             EEECCCCCEEEcCCccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH
Confidence            57889999999999999875321     223468899999998876 467889999999999999999999986432111


Q ss_pred             ccHHHHHHhhcCCcccchhh--------hh---ccccchh--hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVID--------AN---LARDEQS--FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ...... ............        ..   +...+..  ........+.+.+++.+|++.||.+|||+.+++.
T Consensus       224 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         224 -QLKRIM-EVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             -HHHHHH-HHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence             011110 000000000000        00   0000000  0000112345789999999999999999999984

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.81  E-value=1.5e-19  Score=123.72  Aligned_cols=71  Identities=18%  Similarity=0.233  Sum_probs=55.4

Q ss_pred             CCCCceEEcccccceecCCCCC-cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            4 DEDMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         4 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      +.++.+||+|||+++....... ........||+.|+|||++.+. .++.++|+||+|++++++++|..||..
T Consensus       146 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~  218 (317)
T cd07867         146 PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             CCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence            4567899999999987643221 1122335688999999988764 578899999999999999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.81  E-value=6.5e-20  Score=124.27  Aligned_cols=123  Identities=20%  Similarity=0.172  Sum_probs=82.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      |+++.++.+||+|||++......  ........+++.|++||++.     ...++.++|+||+|+++|++++|..||...
T Consensus       141 ili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  218 (292)
T cd06644         141 VLLTLDGDIKLADFGVSAKNVKT--LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL  218 (292)
T ss_pred             EEEcCCCCEEEccCccceecccc--ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc
Confidence            57788899999999998654321  11122345788999999874     334677899999999999999999998643


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...     ..........            ......+......+.+++.+||+.+|++||++.++++
T Consensus       219 ~~~-----~~~~~~~~~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         219 NPM-----RVLLKIAKSE------------PPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             cHH-----HHHHHHhcCC------------CccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            211     1111111000            0000111234456888999999999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=1.8e-20  Score=129.17  Aligned_cols=126  Identities=17%  Similarity=0.182  Sum_probs=87.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++.....     ......|++.|+|||++.+..++.++|+||+|++++++++|..||......+.
T Consensus       132 il~~~~~~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~  206 (333)
T cd05600         132 FLIDASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET  206 (333)
T ss_pred             EEECCCCCEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH
Confidence            6788999999999999976532     12335689999999999888899999999999999999999999865322111


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                        ...+...     ...+.......+     .......+.+++.+||..+|.+||++.++++.
T Consensus       207 --~~~i~~~-----~~~~~~~~~~~~-----~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         207 --WENLKYW-----KETLQRPVYDDP-----RFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             --HHHHHhc-----cccccCCCCCcc-----ccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence              0111100     000000000000     01345678899999999999999999999853

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.81  E-value=1.1e-19  Score=120.52  Aligned_cols=125  Identities=30%  Similarity=0.432  Sum_probs=86.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++......... ......++..|+|||++.+..++.++|+||+|++++++++ |..||.......
T Consensus       124 ili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~  202 (250)
T cd05085         124 CLVGENNVLKISDFGMSRQEDDGIYS-SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ  202 (250)
T ss_pred             EEEcCCCeEEECCCccceeccccccc-cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence            57788999999999998764322111 1111234567999999888888899999999999999998 888886432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                        ....+....    .        .     ..+...+..+.+++.+||..+|.+||++.++++.|.
T Consensus       203 --~~~~~~~~~----~--------~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         203 --AREQVEKGY----R--------M-----SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             --HHHHHHcCC----C--------C-----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence              111111000    0        0     001134567899999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.81  E-value=1e-19  Score=121.32  Aligned_cols=126  Identities=25%  Similarity=0.405  Sum_probs=89.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.++|+|||++........ .......++..|++||+..+..++.++|+||||++++++++ |..||...... 
T Consensus       133 i~i~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-  210 (260)
T cd05067         133 ILVSETLCCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-  210 (260)
T ss_pred             EEEcCCCCEEEccCcceeecCCCCc-ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-
Confidence            5788899999999999977642221 11222335678999999888788889999999999999998 99998643211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                       ...........                 .+.+...+..+.+++.+||..+|++||++++++..|+.
T Consensus       211 -~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         211 -EVIQNLERGYR-----------------MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             -HHHHHHHcCCC-----------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence             11111110000                 00112345679999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.81  E-value=1.7e-20  Score=128.70  Aligned_cols=120  Identities=21%  Similarity=0.220  Sum_probs=85.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++........  ......|++.|+|||++.+..++.++|+||+|++++++++|+.||......  
T Consensus       127 ill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~--  202 (321)
T cd05591         127 ILLDAEGHCKLADFGMCKEGILNGV--TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED--  202 (321)
T ss_pred             eEECCCCCEEEeecccceecccCCc--cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--
Confidence            6789999999999999876432221  123356899999999998888899999999999999999999999653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-------cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-------YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-------t~~~ll~  142 (159)
                      .....+.   ....               ..+......+.+++.+||+.||++|+       ++.++++
T Consensus       203 ~~~~~i~---~~~~---------------~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         203 DLFESIL---HDDV---------------LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             HHHHHHH---cCCC---------------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence            1111111   0000               00112345678899999999999999       7777763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.81  E-value=8.4e-20  Score=133.17  Aligned_cols=128  Identities=20%  Similarity=0.208  Sum_probs=94.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccc------cccccccccccccc---cCCCccccchhhHhHHHHHHHHHhcCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQ------TMTMATIGYMAPEY---GSEGIVSTKCDVYSYGVLLMETFTRKK   70 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~------~~~~gt~~~~~pe~---~~~~~~~~~~dv~s~g~~~~~~~~~~~   70 (159)
                      |||..+|..||||||.+..-...... ...      -...-|+.|++||+   +.+.+.+.++|||++||++|.++....
T Consensus       177 vLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~  256 (738)
T KOG1989|consen  177 VLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTT  256 (738)
T ss_pred             eEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCC
Confidence            68999999999999998653222211 000      01236889999996   456688999999999999999999999


Q ss_pred             CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           71 PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        71 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      ||+....                 -.++.     ..+.++........+..|++.||+.||++||++.+++..+.+++..
T Consensus       257 PFe~sg~-----------------laIln-----g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~  314 (738)
T KOG1989|consen  257 PFEESGK-----------------LAILN-----GNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK  314 (738)
T ss_pred             CcCcCcc-----------------eeEEe-----ccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence            9976311                 11211     1112222236778899999999999999999999999999888764

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=1.1e-20  Score=136.09  Aligned_cols=118  Identities=23%  Similarity=0.272  Sum_probs=87.7

Q ss_pred             CCCceEEcccccceecCCCCCcccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCcccccccccH
Q 035782            5 EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSL   82 (159)
Q Consensus         5 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~   82 (159)
                      =+|.+||+|||-++...  +......++.||..|||||++..+  +|+.++|||||||++.||.+|++||......    
T Consensus       711 ySGvlKISDFGTsKRLA--ginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp----  784 (1226)
T KOG4279|consen  711 YSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP----  784 (1226)
T ss_pred             ccceEEecccccchhhc--cCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh----
Confidence            35899999999997653  222234457799999999987655  6899999999999999999999999653211    


Q ss_pred             HHHHHhhcCCcccchhh-hhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           83 RDWVNKSLSGELTQVID-ANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        83 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                                 ....+. .+.+.++   +.|.....+..+++.+|+.+||.+||++.+++.
T Consensus       785 -----------qAAMFkVGmyKvHP---~iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  785 -----------QAAMFKVGMYKVHP---PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             -----------hHhhhhhcceecCC---CCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence                       011111 1122222   245577788999999999999999999999984

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=1.1e-19  Score=121.20  Aligned_cols=125  Identities=22%  Similarity=0.295  Sum_probs=85.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC---ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||.+.......  .......++..|++||...+.   .++.++|+||+|++++++++|..||.....
T Consensus       132 i~i~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~  209 (262)
T cd06613         132 ILLTEDGDVKLADFGVSAQLTATI--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP  209 (262)
T ss_pred             EEECCCCCEEECccccchhhhhhh--hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence            578899999999999987654321  112234578889999988766   778899999999999999999999865321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....  .....   ...          ..........+..+.+++.+||..+|.+|||+.+++.
T Consensus       210 ~~~~~--~~~~~---~~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         210 MRALF--LISKS---NFP----------PPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHHH--HHHhc---cCC----------CccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            11100  00000   000          0000011234567899999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.81  E-value=4.7e-20  Score=124.14  Aligned_cols=123  Identities=22%  Similarity=0.312  Sum_probs=85.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++........   .....|+..|+|||++.+..++.++|+||+|++++++++|..||...... .
T Consensus       126 ili~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~  201 (277)
T cd05607         126 VLLDDQGNCRLSDLGLAVELKDGKT---ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-V  201 (277)
T ss_pred             EEEcCCCCEEEeeceeeeecCCCce---eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-h
Confidence            5788899999999999977643221   22345888999999988888899999999999999999999998643211 1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      .............        ....      .......+.+++.+||+.||.+||++.|++
T Consensus       202 ~~~~~~~~~~~~~--------~~~~------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~  248 (277)
T cd05607         202 AKEELKRRTLEDE--------VKFE------HQNFTEESKDICRLFLAKKPEDRLGSREKN  248 (277)
T ss_pred             hHHHHHHHhhccc--------cccc------cccCCHHHHHHHHHHhccCHhhCCCCccch
Confidence            1111111111000        0000      012345688999999999999999997655

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=8.4e-20  Score=122.62  Aligned_cols=122  Identities=20%  Similarity=0.251  Sum_probs=86.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||+++......  .......++..|++||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       129 i~i~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~-  205 (274)
T cd06609         129 ILLSEEGDVKLADFGVSGQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR-  205 (274)
T ss_pred             EEECCCCCEEEcccccceeecccc--cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH-
Confidence            578889999999999998765321  12233457888999999988888999999999999999999999986432110 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ....+....    .    +.+..        ...+..+.+++.+||..+|++|||++++++
T Consensus       206 -~~~~~~~~~----~----~~~~~--------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         206 -VLFLIPKNN----P----PSLEG--------NKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             -HHHHhhhcC----C----CCCcc--------cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence             000000000    0    00000        014456888999999999999999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.81  E-value=5.5e-20  Score=124.00  Aligned_cols=124  Identities=20%  Similarity=0.252  Sum_probs=86.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......|++.|+|||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       128 ili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-  204 (280)
T cd05608         128 VLLDNDGNVRISDLGLAVELKDGQS--KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-  204 (280)
T ss_pred             EEECCCCCEEEeeCccceecCCCCc--cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-
Confidence            5788899999999999977643222  1223468899999999988888999999999999999999999986432110 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                      ............        .       ...+...+..+.+++.+||+.||++||     +++++++
T Consensus       205 ~~~~~~~~~~~~--------~-------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         205 ENKELKQRILND--------S-------VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             hHHHHHHhhccc--------C-------CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            011111100000        0       001123456788999999999999999     7777774

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.81  E-value=2.1e-20  Score=128.35  Aligned_cols=115  Identities=20%  Similarity=0.240  Sum_probs=82.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++......  .......||+.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       132 ill~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--  207 (323)
T cd05616         132 VMLDSEGHIKIADFGMCKENMWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--  207 (323)
T ss_pred             eEECCCCcEEEccCCCceecCCCC--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--
Confidence            688999999999999987543211  1223356899999999998888999999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                      .....+...   .        .       ..+......+.+++.+|++.||++|+++
T Consensus       208 ~~~~~i~~~---~--------~-------~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         208 ELFQSIMEH---N--------V-------AYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             HHHHHHHhC---C--------C-------CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            111111100   0        0       0011334567889999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.81  E-value=7.6e-20  Score=122.51  Aligned_cols=124  Identities=21%  Similarity=0.267  Sum_probs=88.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||.+.......   ......++..|++||.+.+..++.++|+||+|++++++++|..||......  
T Consensus       145 il~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~--  219 (269)
T cd08528         145 IMLGEDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML--  219 (269)
T ss_pred             EEECCCCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH--
Confidence            578889999999999998764332   223345788899999998878889999999999999999999998542211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                      .......   .....        +..     .......+.+++.+||+.||++||++.|+...++
T Consensus       220 ~~~~~~~---~~~~~--------~~~-----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         220 SLATKIV---EAVYE--------PLP-----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHHh---hccCC--------cCC-----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            1111110   00000        000     0123456889999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.81  E-value=1.2e-19  Score=120.71  Aligned_cols=123  Identities=30%  Similarity=0.475  Sum_probs=87.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||.++.......     ....+..|++||+.....++.++|+||+|++++++++ |..||.......
T Consensus       133 ili~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  207 (256)
T cd05039         133 VLVSEDLVAKVSDFGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD  207 (256)
T ss_pred             EEEeCCCCEEEcccccccccccccc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            5788899999999999977632211     1224557999999887788889999999999999997 888886432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                        .........            ..     ..+...+..+.+++.+||..+|++|||+.++++.|+++
T Consensus       208 --~~~~~~~~~------------~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         208 --VVPHVEKGY------------RM-----EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             --HHHHHhcCC------------CC-----CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence              111111000            00     00113456788999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.81  E-value=2.5e-20  Score=128.45  Aligned_cols=125  Identities=22%  Similarity=0.207  Sum_probs=85.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.+...... ......||+.|+|||++.+. .++.++|+||+|++++++++|..||.......
T Consensus       136 ili~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~  214 (332)
T cd05614         136 ILLDSEGHVVLTDFGLSKEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN  214 (332)
T ss_pred             eEECCCCCEEEeeCcCCccccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC
Confidence            68899999999999999765432222 12235689999999998765 47888999999999999999999986432111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                      . ........            ....+   ..+......+.+++.+||+.||++||     ++.++++
T Consensus       215 ~-~~~~~~~~------------~~~~~---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         215 T-QSEVSRRI------------LKCDP---PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             C-HHHHHHHH------------hcCCC---CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            1 10110000            00000   01113445688899999999999999     7778774

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.81  E-value=8.3e-20  Score=123.06  Aligned_cols=143  Identities=22%  Similarity=0.327  Sum_probs=91.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCccc-ccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVT-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.++|+|||.+........... .....++..|++||...+..++.++|+||+|++++++++|..|+.......
T Consensus       140 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~  219 (284)
T cd05038         140 ILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEF  219 (284)
T ss_pred             EEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchh
Confidence            5788889999999999987643222111 111234556999998887788889999999999999999998875422111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                      ...   ............+...+.. ......+..++..+.+++.+||+.+|++|||+.+|++.|+++
T Consensus       220 ~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         220 LRM---IGIAQGQMIVTRLLELLKE-GERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             ccc---cccccccccHHHHHHHHHc-CCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            000   0000000000000000000 001111224557799999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=1.5e-19  Score=130.52  Aligned_cols=141  Identities=12%  Similarity=0.097  Sum_probs=86.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCC-Cccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKP-TDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p-~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.+...... ......|++.|++||++.+..++.++|+||+|+++++++++..+ +.......
T Consensus       298 ILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~  376 (501)
T PHA03210        298 IFLNCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP  376 (501)
T ss_pred             EEECCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH
Confidence            68889999999999999876432221 22235689999999999888899999999999999999998754 33221111


Q ss_pred             -ccHHHHHHhh------cCCcccchhh---h-hcccc---chhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 -MSLRDWVNKS------LSGELTQVID---A-NLARD---EQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 -~~~~~~~~~~------~~~~~~~~~~---~-~~~~~---~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ..+...+...      .+.....+.+   . .+...   ..........+..+.+++.+|++.||.+|||+.|++.
T Consensus       377 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        377 GKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             HHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence             1111111100      0000000000   0 00000   0000111123445777899999999999999999985

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.81  E-value=7.8e-20  Score=123.41  Aligned_cols=142  Identities=16%  Similarity=0.268  Sum_probs=89.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++........ .......++..|+|||++.+..++.++|+||+|+++++++++..|....... 
T Consensus       140 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~-  218 (284)
T cd05079         140 VLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL-  218 (284)
T ss_pred             EEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch-
Confidence            57788999999999999876432221 1122344666799999988777889999999999999999876553221000 


Q ss_pred             ccHHHHHHhhcC-CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLS-GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                        .......... ......+......  ...+.+...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       219 --~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         219 --FLKMIGPTHGQMTVTRLVRVLEEG--KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             --hhhhcccccccccHHHHHHHHHcC--ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence              0000000000 0000000000000  00111224567899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.80  E-value=3.1e-19  Score=137.69  Aligned_cols=141  Identities=28%  Similarity=0.450  Sum_probs=96.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++..++. ||......      ......+++.|+|||++.+..++.++||||||+++||+++|+.||........
T Consensus       814 il~~~~~~~~~~-~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~  886 (968)
T PLN00113        814 IIIDGKDEPHLR-LSLPGLLC------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHG  886 (968)
T ss_pred             EEECCCCceEEE-eccccccc------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCC
Confidence            456666666664 55443321      11223578899999999888899999999999999999999999865444444


Q ss_pred             cHHHHHHhhcC-CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           81 SLRDWVNKSLS-GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      ....|...... ......+++.+....   .....+...+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus       887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~  955 (968)
T PLN00113        887 SIVEWARYCYSDCHLDMWIDPSIRGDV---SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS  955 (968)
T ss_pred             cHHHHHHHhcCccchhheeCccccCCC---CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence            45555443322 122333344332211   112345667889999999999999999999999999987743

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.80  E-value=9.9e-20  Score=129.86  Aligned_cols=143  Identities=13%  Similarity=0.079  Sum_probs=87.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc--
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG--   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~--   78 (159)
                      ||++.++.+||+|||+++...............||+.|++||++.+..++.++|+|||||++|+++.|..++-.....  
T Consensus       291 ILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~  370 (461)
T PHA03211        291 VLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDE  370 (461)
T ss_pred             EEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccc
Confidence            688899999999999998764332222223356899999999998888999999999999999999877553221110  


Q ss_pred             c----ccHHHHHHhhc--CCcccc-----hhhhhcc-----ccc-hhh---hhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782           79 E----MSLRDWVNKSL--SGELTQ-----VIDANLA-----RDE-QSF---FVKMDCLSSIMHLALDCCMESPDQRIYMT  138 (159)
Q Consensus        79 ~----~~~~~~~~~~~--~~~~~~-----~~~~~~~-----~~~-~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  138 (159)
                      .    ......+....  ...+..     +......     ..+ ...   .........+.+++.+||..||.+|||+.
T Consensus       371 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~  450 (461)
T PHA03211        371 RRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAA  450 (461)
T ss_pred             cCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHH
Confidence            0    11111111110  000000     0000000     000 000   00011234678899999999999999999


Q ss_pred             HHHHH
Q 035782          139 DAAAK  143 (159)
Q Consensus       139 ~ll~~  143 (159)
                      |+++.
T Consensus       451 elL~h  455 (461)
T PHA03211        451 ELLRL  455 (461)
T ss_pred             HHhhC
Confidence            99863

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=9.5e-20  Score=123.14  Aligned_cols=123  Identities=21%  Similarity=0.282  Sum_probs=86.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |++++++.++|+|||++........   .....|++.|++||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       133 il~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-  208 (285)
T cd05605         133 ILLDDYGHIRISDLGLAVEIPEGET---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-  208 (285)
T ss_pred             EEECCCCCEEEeeCCCceecCCCCc---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-
Confidence            5788889999999999987643221   223468899999999888888899999999999999999999997532111 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                       ....+...+...        ...      .+...+..+.+++.+||+.||++||     ++.++++
T Consensus       209 -~~~~~~~~~~~~--------~~~------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         209 -KREEVERRVKED--------QEE------YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             -HHHHHHHHhhhc--------ccc------cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence             001111100000        000      0113455688999999999999999     8888864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.80  E-value=5.1e-20  Score=123.22  Aligned_cols=127  Identities=18%  Similarity=0.230  Sum_probs=84.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||++..+.....  ......++..|+|||.+.   ...++.++|+||+|++++++++|..||.....
T Consensus       137 ill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~  214 (267)
T cd06646         137 ILLTDNGDVKLADFGVAAKITATIA--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHP  214 (267)
T ss_pred             EEECCCCCEEECcCccceeeccccc--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccch
Confidence            5778899999999999986632211  122345788999999874   33467889999999999999999999754321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                      ....     .........   .+..       ......+..+.+++.+||..+|++|||++++++.|
T Consensus       215 ~~~~-----~~~~~~~~~---~~~~-------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         215 MRAL-----FLMSKSNFQ---PPKL-------KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             hhhh-----eeeecCCCC---CCCC-------ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            1000     000000000   0000       00112346788999999999999999999998643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.80  E-value=6.9e-20  Score=122.40  Aligned_cols=128  Identities=24%  Similarity=0.303  Sum_probs=86.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc--cccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV--TQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||++..+.......  ......|+..|++||++... .++.++|+||+|++++++++|..||.....
T Consensus       133 i~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~  212 (267)
T cd06610         133 ILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP  212 (267)
T ss_pred             EEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh
Confidence            567888999999999987765433221  22334578899999988766 678899999999999999999999864322


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .. ........    . .    +.+....    .....+..+.+++.+||..||++||++.+++.
T Consensus       213 ~~-~~~~~~~~----~-~----~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         213 MK-VLMLTLQN----D-P----PSLETGA----DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             hh-hHHHHhcC----C-C----CCcCCcc----ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            11 11111100    0 0    0000000    01134567889999999999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.80  E-value=8.8e-20  Score=122.90  Aligned_cols=126  Identities=21%  Similarity=0.256  Sum_probs=87.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++.......    .....|+..|+|||++.+..++.++|+||+|++++++++|..||........
T Consensus       126 ill~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~  201 (279)
T cd06619         126 MLVNTRGQVKLCDFGVSTQLVNSI----AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQG  201 (279)
T ss_pred             EEECCCCCEEEeeCCcceeccccc----ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccc
Confidence            578889999999999997653221    2234688899999999888889999999999999999999999865332111


Q ss_pred             c--HHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           81 S--LRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        81 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      .  ...........            .... .........+.+++.+||+.+|.+||++.++++.
T Consensus       202 ~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         202 SLMPLQLLQCIVDE------------DPPV-LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             ccchHHHHHHHhcc------------CCCC-CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            1  11111000000            0000 0001234568899999999999999999999853

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.80  E-value=6.1e-20  Score=123.75  Aligned_cols=122  Identities=17%  Similarity=0.215  Sum_probs=83.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      |+++.++.++|+|||++........  ......|++.|+|||.+.     ...++.++|+||+|++++++++|..||...
T Consensus       152 ili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~  229 (282)
T cd06636         152 VLLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDM  229 (282)
T ss_pred             EEECCCCCEEEeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCcccc
Confidence            5788899999999999876532111  123355888999999865     235677899999999999999999998643


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....     ...        ....     ..........+..+.+++.+||+.||.+|||+.|+++
T Consensus       230 ~~~~~-----~~~--------~~~~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         230 HPMRA-----LFL--------IPRN-----PPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             CHHhh-----hhh--------HhhC-----CCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            21100     000        0000     0000011134567899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.80  E-value=4.4e-20  Score=126.49  Aligned_cols=119  Identities=24%  Similarity=0.261  Sum_probs=83.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++........  ......||+.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       127 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--  202 (316)
T cd05619         127 ILLDTDGHIKIADFGMCKENMLGDA--KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--  202 (316)
T ss_pred             EEECCCCCEEEccCCcceECCCCCC--ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--
Confidence            5788999999999999875322111  122356899999999998888899999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH-HHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT-DAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~-~ll  141 (159)
                      .....+....         +.         .+......+.+++.+||+.||.+||++. +++
T Consensus       203 ~~~~~i~~~~---------~~---------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         203 ELFQSIRMDN---------PC---------YPRWLTREAKDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             HHHHHHHhCC---------CC---------CCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence            1111111000         00         0112334578899999999999999996 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.80  E-value=4.1e-20  Score=126.60  Aligned_cols=119  Identities=21%  Similarity=0.224  Sum_probs=83.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++.......  ......|++.|+|||++.+..++.++|+||+|++++++++|..||.....  .
T Consensus       127 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~  202 (316)
T cd05620         127 VMLDRDGHIKIADFGMCKENVFGDN--RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--D  202 (316)
T ss_pred             eEECCCCCEEeCccCCCeecccCCC--ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--H
Confidence            6789999999999999875321111  22345689999999999888899999999999999999999999864321  1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH-HHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT-DAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~-~ll  141 (159)
                      .....+....         +..         +......+.+++.+||+.||++|+++. +++
T Consensus       203 ~~~~~~~~~~---------~~~---------~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         203 ELFESIRVDT---------PHY---------PRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHHHHHHhCC---------CCC---------CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            1111111000         000         112344678899999999999999974 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.80  E-value=3.8e-20  Score=127.18  Aligned_cols=115  Identities=21%  Similarity=0.246  Sum_probs=81.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++........  ......||+.|+|||++.+..++.++|+||+|++++++++|+.||......  
T Consensus       132 ill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--  207 (324)
T cd05587         132 VMLDAEGHIKIADFGMCKENIFGGK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--  207 (324)
T ss_pred             eEEcCCCCEEEeecCcceecCCCCC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--
Confidence            6788999999999999875322111  122356899999999998888899999999999999999999998643211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                      .....+....           . .      .+......+.+++.+||..||.+|+++
T Consensus       208 ~~~~~i~~~~-----------~-~------~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         208 ELFQSIMEHN-----------V-S------YPKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             HHHHHHHcCC-----------C-C------CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            1111110000           0 0      011234567899999999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.80  E-value=1.8e-19  Score=119.79  Aligned_cols=124  Identities=28%  Similarity=0.385  Sum_probs=85.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||.++...+... .......++..|++||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       131 i~i~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~  209 (256)
T cd05112         131 CLVGENQVVKVSDFGMTRFVLDDQY-TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE  209 (256)
T ss_pred             EEEcCCCeEEECCCcceeecccCcc-cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence            4678889999999999876543221 11122334668999999888788899999999999999998 888886422111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                        ....+..    ..+. .            .+...+..+.+++.+||+.+|++|||+.++++.|
T Consensus       210 --~~~~~~~----~~~~-~------------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         210 --VVETINA----GFRL-Y------------KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             --HHHHHhC----CCCC-C------------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence              1111100    0000 0            0012345789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.80  E-value=1.7e-20  Score=126.09  Aligned_cols=133  Identities=19%  Similarity=0.217  Sum_probs=87.6

Q ss_pred             CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc-ccHH
Q 035782            5 EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE-MSLR   83 (159)
Q Consensus         5 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~-~~~~   83 (159)
                      ++..+|+.|||.|.....     ..+..+.|..|.|||++.+.+++...||||+||+++|+.+|...|+.-.+.+ ..+.
T Consensus       247 ks~~I~vIDFGsAtf~~e-----~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMM  321 (415)
T KOG0671|consen  247 KSTAIKVIDFGSATFDHE-----HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMM  321 (415)
T ss_pred             CCcceEEEecCCcceecc-----CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHH
Confidence            456789999999987421     1244678999999999999999999999999999999999999888644211 1122


Q ss_pred             HHHHhhcCCcc------cchhh-hhcc--------------ccc----hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782           84 DWVNKSLSGEL------TQVID-ANLA--------------RDE----QSFFVKMDCLSSIMHLALDCCMESPDQRIYMT  138 (159)
Q Consensus        84 ~~~~~~~~~~~------~~~~~-~~~~--------------~~~----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  138 (159)
                      +.+....+...      +..+. ..+.              ..+    ........+...+++|+.++|..||++|+|+.
T Consensus       322 erIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~  401 (415)
T KOG0671|consen  322 ERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLR  401 (415)
T ss_pred             HHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHH
Confidence            22211111000      00000 0000              000    01112234567799999999999999999999


Q ss_pred             HHHH
Q 035782          139 DAAA  142 (159)
Q Consensus       139 ~ll~  142 (159)
                      |++.
T Consensus       402 EAL~  405 (415)
T KOG0671|consen  402 EALS  405 (415)
T ss_pred             HHhc
Confidence            9874

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.80  E-value=1.3e-19  Score=121.27  Aligned_cols=128  Identities=27%  Similarity=0.466  Sum_probs=89.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCccc-ccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVT-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      |+++.++.+|++|||++..+........ .....++..|++||+..+..++.++|+||||++++++++ |..||......
T Consensus       137 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~  216 (267)
T cd05066         137 ILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ  216 (267)
T ss_pred             EEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH
Confidence            5778899999999999987643322111 111223567999999988888999999999999999886 99998653221


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                      +  ....+....    .             .+.+...+..+.+++.+||+.+|.+||++.++++.|+++
T Consensus       217 ~--~~~~~~~~~----~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         217 D--VIKAIEEGY----R-------------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             H--HHHHHhCCC----c-------------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            1  111111000    0             001123456788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=9.9e-20  Score=122.06  Aligned_cols=123  Identities=21%  Similarity=0.265  Sum_probs=83.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      |+++.++.+||+|||.+.......  .......++..|+|||++..     ..++.++|+||+|++++++++|..||...
T Consensus       144 i~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  221 (275)
T cd06608         144 ILLTKNAEVKLVDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM  221 (275)
T ss_pred             EEEccCCeEEECCCccceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcccc
Confidence            578889999999999987654222  12233557889999998643     24567899999999999999999998643


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .... ....    .......            ....+......+.+++.+||..||++|||+.++++
T Consensus       222 ~~~~-~~~~----~~~~~~~------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         222 HPMR-ALFK----IPRNPPP------------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             chHH-HHHH----hhccCCC------------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            2111 0100    0000000            00111234567889999999999999999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.80  E-value=5.1e-20  Score=126.78  Aligned_cols=121  Identities=20%  Similarity=0.261  Sum_probs=82.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc-
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE-   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~-   79 (159)
                      |+++.++.+||+|||+++.......  ......||+.|+|||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       127 ili~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~  204 (329)
T cd05618         127 VLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN  204 (329)
T ss_pred             EEECCCCCEEEeeCCccccccCCCC--ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCC
Confidence            6788999999999999875322111  1233568999999999988888999999999999999999999986422111 


Q ss_pred             --ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           80 --MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        80 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                        .....+.....           .....   ..+......+.+++.+||+.||.+||++
T Consensus       205 ~~~~~~~~~~~~i-----------~~~~~---~~p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         205 PDQNTEDYLFQVI-----------LEKQI---RIPRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             cccccHHHHHHHH-----------hcCCC---CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence              11111111100           00000   0112344567899999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.80  E-value=2.3e-20  Score=128.23  Aligned_cols=116  Identities=22%  Similarity=0.213  Sum_probs=83.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++........  ......|++.|+|||++.+..++.++|+||+|++++++++|..||.....   
T Consensus       127 Ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---  201 (323)
T cd05575         127 ILLDSQGHVVLTDFGLCKEGIEHSK--TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT---  201 (323)
T ss_pred             eEECCCCcEEEeccCCCcccccCCC--ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH---
Confidence            6889999999999999875422111  22335689999999999888889999999999999999999999865321   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT  138 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  138 (159)
                        ...........        ..       .+...+..+.+++.+||+.||.+||++.
T Consensus       202 --~~~~~~i~~~~--------~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         202 --AEMYDNILNKP--------LR-------LKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             --HHHHHHHHcCC--------CC-------CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence              11111111000        00       0112355788999999999999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.80  E-value=1.2e-19  Score=121.52  Aligned_cols=129  Identities=19%  Similarity=0.280  Sum_probs=81.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-------CccccchhhHhHHHHHHHHHh-cCCCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-------GIVSTKCDVYSYGVLLMETFT-RKKPT   72 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-------~~~~~~~dv~s~g~~~~~~~~-~~~p~   72 (159)
                      |+++.++.+||+|||++................++..|+|||+...       ..++.++|+||+|++++++++ |..||
T Consensus       131 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~  210 (269)
T cd05042         131 CQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPY  210 (269)
T ss_pred             eEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCC
Confidence            5788999999999999865432221111222335667999997532       346788999999999999998 77787


Q ss_pred             cccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           73 DEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                      ......+ .......    .....+..+.+         +...+..+.+++..|| .||++|||+++|+..|
T Consensus       211 ~~~~~~~-~~~~~~~----~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         211 PDLSDEQ-VLKQVVR----EQDIKLPKPQL---------DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             CcCCHHH-HHHHHhh----ccCccCCCCcc---------cccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence            6432211 0111111    00001111111         1123455677888898 5999999999999876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.80  E-value=2.7e-19  Score=119.28  Aligned_cols=121  Identities=22%  Similarity=0.320  Sum_probs=87.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......++..|++||.+.+..++.++|+||+|++++++++|..||.....  .
T Consensus       141 ili~~~~~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~  216 (265)
T cd08217         141 IFLDANNNVKLGDFGLAKILGHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--L  216 (265)
T ss_pred             EEEecCCCEEEecccccccccCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--H
Confidence            5788889999999999987643322  12234578899999998888888999999999999999999999865321  1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....+..   ....              ..+...+..+.+++.+||+.+|++||++.+|++
T Consensus       217 ~~~~~~~~---~~~~--------------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         217 QLASKIKE---GKFR--------------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             HHHHHHhc---CCCC--------------CCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            11111111   0000              011244567899999999999999999999885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.80  E-value=1.5e-19  Score=124.61  Aligned_cols=151  Identities=18%  Similarity=0.287  Sum_probs=98.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-cc-----ccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IV-----STKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~-----~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      ||+.+++++.|+|||+|..+.......-....+||.+|||||++-+. .+     -.+.||||+|.++||++++...+..
T Consensus       347 VLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~  426 (534)
T KOG3653|consen  347 VLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADP  426 (534)
T ss_pred             eEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccC
Confidence            68899999999999999888654444334447899999999987654 12     2469999999999999997644321


Q ss_pred             ccccc--ccHHHHHHhhcC-Ccccch-hhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           75 MFIGE--MSLRDWVNKSLS-GELTQV-IDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        75 ~~~~~--~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      ....+  ..+...+..... ..++++ +.....+..+.....+..+..+.+.+..||+.||..|.|+..+.+++.++...
T Consensus       427 ~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~  506 (534)
T KOG3653|consen  427 GPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML  506 (534)
T ss_pred             CCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence            01111  111111111110 111111 12222233333333445677899999999999999999999999998888755


Q ss_pred             h
Q 035782          151 F  151 (159)
Q Consensus       151 ~  151 (159)
                      -
T Consensus       507 ~  507 (534)
T KOG3653|consen  507 W  507 (534)
T ss_pred             C
Confidence            4

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.80  E-value=2.6e-19  Score=120.50  Aligned_cols=122  Identities=20%  Similarity=0.250  Sum_probs=87.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++++|||++........  ......++..|+|||++.+..++.++|+||||++++++++|..||........
T Consensus       132 il~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~  209 (277)
T cd06640         132 VLLSEQGDVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV  209 (277)
T ss_pred             EEEcCCCCEEEcccccceeccCCcc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH
Confidence            5778889999999999977643221  12224577889999998887888999999999999999999999865322110


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      .  ...            ....     ........+..+.+++.+||+.+|++||++.++++.
T Consensus       210 ~--~~~------------~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         210 L--FLI------------PKNN-----PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             h--hhh------------hcCC-----CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            0  000            0000     001122456778999999999999999999999854

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.80  E-value=7.7e-20  Score=123.98  Aligned_cols=124  Identities=20%  Similarity=0.195  Sum_probs=85.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......|+..|+|||...+..++.++|+||+|++++++++|..||......  
T Consensus       149 ill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--  224 (292)
T cd06658         149 ILLTSDGRIKLSDFGFCAQVSKEVP--KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--  224 (292)
T ss_pred             EEEcCCCCEEEccCcchhhcccccc--cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--
Confidence            5788899999999999876532221  122345788999999988778889999999999999999999998642210  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      .....+......        .+.       ........+..++.+||..||.+|||+.++++.
T Consensus       225 ~~~~~~~~~~~~--------~~~-------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         225 QAMRRIRDNLPP--------RVK-------DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHHHHhcCCC--------ccc-------cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            000001110000        000       011234467889999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.80  E-value=7.3e-21  Score=125.32  Aligned_cols=122  Identities=23%  Similarity=0.354  Sum_probs=95.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++-+|..||+|||++..+.  +.-..+++++|||.|+|||++..-.|+..+|+||+|++--||..|++||..+.+.. 
T Consensus       160 ILLNT~G~AKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR-  236 (502)
T KOG0574|consen  160 ILLNTDGIAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR-  236 (502)
T ss_pred             EEEcccchhhhhhccccchhh--hhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc-
Confidence            688999999999999997764  23335677899999999999988889999999999999999999999987653311 


Q ss_pred             cHHHHHHhhcCCcccchhhhhc-cccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANL-ARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                                     .++  ++ ...++.+-.|......+-++++.|+...|.+|-|+-++++
T Consensus       237 ---------------AIF--MIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  237 ---------------AIF--MIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             ---------------eeE--eccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence                           111  01 1122233345566777999999999999999999998874

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.80  E-value=1.3e-19  Score=122.44  Aligned_cols=124  Identities=20%  Similarity=0.255  Sum_probs=84.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      |+++.++.+||+|||++........  ......|++.|+|||++..     ..++.++|+||+|++++++++|..||...
T Consensus       155 ili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~  232 (286)
T cd06638         155 ILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADL  232 (286)
T ss_pred             EEECCCCCEEEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCC
Confidence            5778889999999999877643221  1223458889999998743     34678999999999999999999998643


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      ...    .... ......            ......+......+.+++.+||+.||++|||+.|+++.
T Consensus       233 ~~~----~~~~-~~~~~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         233 HPM----RALF-KIPRNP------------PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             chh----HHHh-hccccC------------CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            210    0000 000000            00000111234568899999999999999999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.80  E-value=1.5e-19  Score=120.99  Aligned_cols=125  Identities=20%  Similarity=0.272  Sum_probs=82.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||++......  ........|+..|+|||++.   ...++.++|+||+|++++++++|..||.....
T Consensus       137 ili~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~  214 (267)
T cd06645         137 ILLTDNGHVKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP  214 (267)
T ss_pred             EEECCCCCEEECcceeeeEccCc--ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc
Confidence            57788899999999998765322  11223346889999999864   34577899999999999999999999754321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ....     .........   .+...       .....+..+.+++.+||..+|++||++.++++
T Consensus       215 ~~~~-----~~~~~~~~~---~~~~~-------~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         215 MRAL-----FLMTKSNFQ---PPKLK-------DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             hhhH-----HhhhccCCC---CCccc-------ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            1100     000000000   00000       00123446788999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.80  E-value=1.6e-19  Score=120.40  Aligned_cols=126  Identities=26%  Similarity=0.459  Sum_probs=88.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........ .......++..|++||...+..++.++|+||+|++++++++ |..||...... 
T Consensus       134 ili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-  211 (261)
T cd05034         134 ILVGENLVCKIADFGLARLIEDDEY-TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-  211 (261)
T ss_pred             EEEcCCCCEEECccccceeccchhh-hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence            5788899999999999987643211 11112234567999999888888899999999999999998 88898543211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                       .....+....    .             .+.+...+..+.+++.+||..+|++||++.+++..|+.
T Consensus       212 -~~~~~~~~~~----~-------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         212 -EVLEQVERGY----R-------------MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             -HHHHHHHcCC----C-------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence             1111111000    0             00111235578999999999999999999999988874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.80  E-value=4.9e-19  Score=119.75  Aligned_cols=130  Identities=21%  Similarity=0.174  Sum_probs=86.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++........    ....++..|++||.+.+..++.++|+|++|++++++++|..||........
T Consensus       136 il~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~  211 (287)
T cd06621         136 ILLTRKGQVKLCDFGVSGELVNSLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL  211 (287)
T ss_pred             EEEecCCeEEEeecccccccccccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC
Confidence            5678889999999999876432211    123467789999998888888999999999999999999999875432111


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...+...........     .+....   ......+..+.+++.+||..+|++|||+.|+++
T Consensus       212 ~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         212 GPIELLSYIVNMPNP-----ELKDEP---GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             ChHHHHHHHhcCCch-----hhccCC---CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            111111111100000     000000   000123567889999999999999999999996

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.80  E-value=1.3e-19  Score=122.65  Aligned_cols=123  Identities=22%  Similarity=0.279  Sum_probs=83.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-----ccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-----IVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-----~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      |+++.++.+||+|||++........  ......|+..|++||++...     .++.++|+||+|++++++++|..||...
T Consensus       159 ili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~  236 (291)
T cd06639         159 ILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM  236 (291)
T ss_pred             EEEcCCCCEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence            5778889999999999876532221  12234578889999987543     3578899999999999999999998653


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..... ... +.....   ..+            ..+......+.+++.+||+.+|++||++.++++
T Consensus       237 ~~~~~-~~~-~~~~~~---~~~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         237 HPVKT-LFK-IPRNPP---PTL------------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             cHHHH-HHH-HhcCCC---CCC------------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            21110 000 000000   000            001123446889999999999999999999885

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.80  E-value=3.2e-19  Score=119.52  Aligned_cols=129  Identities=21%  Similarity=0.323  Sum_probs=80.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-------CccccchhhHhHHHHHHHHHh-cCCCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-------GIVSTKCDVYSYGVLLMETFT-RKKPT   72 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-------~~~~~~~dv~s~g~~~~~~~~-~~~p~   72 (159)
                      ||++.++.+||+|||++................++..|++||++..       ..++.++|+||||++++++++ +..||
T Consensus       130 il~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~  209 (268)
T cd05086         130 CFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPY  209 (268)
T ss_pred             EEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Confidence            5788899999999999864322111112223457888999998643       234678999999999999986 45676


Q ss_pred             cccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           73 DEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                      .....     ...+..........+.++.+.         ......+.+++..|| .+|++||++.+|++.|
T Consensus       210 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l  266 (268)
T cd05086         210 SHLSD-----REVLNHVIKDQQVKLFKPQLE---------LPYSERWYEVLQFCW-LSPEKRATAEEVHRLL  266 (268)
T ss_pred             CCCCH-----HHHHHHHHhhcccccCCCccC---------CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence            54221     111111111111111111111         112346777899999 6799999999998876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.80  E-value=1.4e-19  Score=120.84  Aligned_cols=125  Identities=20%  Similarity=0.216  Sum_probs=85.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||.+........    ....++..|++||.+.+..++.++|+||+|++++++++|..||........
T Consensus       132 i~~~~~~~~~l~d~g~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~  207 (265)
T cd06605         132 ILVNSRGQIKLCDFGVSGQLVNSLA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD  207 (265)
T ss_pred             EEECCCCCEEEeecccchhhHHHHh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc
Confidence            5788899999999999876532111    115578889999998888889999999999999999999999865321111


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..........            .......+ .......+.+++..||..||.+|||+.+++.
T Consensus       208 ~~~~~~~~~~------------~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         208 GIFELLQYIV------------NEPPPRLP-SGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             cHHHHHHHHh------------cCCCCCCC-hhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            1111111111            00000000 0014556889999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.80  E-value=1.7e-19  Score=120.12  Aligned_cols=127  Identities=27%  Similarity=0.293  Sum_probs=87.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-CCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.++|+|||.+....  ..........++..|.|||+.. +..++.++|+||+|++++++++|..||.....  
T Consensus       129 Il~~~~~~~~l~Dfg~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--  204 (260)
T PF00069_consen  129 ILLDENGEVKLIDFGSSVKLS--ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS--  204 (260)
T ss_dssp             EEESTTSEEEESSGTTTEEST--STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--
T ss_pred             ccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence            578899999999999998642  1222333456888999999988 77889999999999999999999999876411  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ......+.....        ....   ............+.+++..||+.||++||++.++++
T Consensus       205 ~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  205 DDQLEIIEKILK--------RPLP---SSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHHHHHHH--------THHH---HHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             hhhhhhhhhccc--------cccc---ccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            011111110000        0000   000000112368999999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.80  E-value=1.8e-20  Score=128.88  Aligned_cols=118  Identities=23%  Similarity=0.242  Sum_probs=84.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++.......  ......|++.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       127 ili~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--  202 (325)
T cd05602         127 ILLDSQGHIVLTDFGLCKENIEHNG--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--  202 (325)
T ss_pred             eEECCCCCEEEccCCCCcccccCCC--CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--
Confidence            6788999999999999875432111  223356899999999998888899999999999999999999998643211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDA  140 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~l  140 (159)
                         .........        ...       .+......+.+++.+||+.||.+|+++.+.
T Consensus       203 ---~~~~~i~~~--------~~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~  244 (325)
T cd05602         203 ---EMYDNILNK--------PLQ-------LKPNITNSARHLLEGLLQKDRTKRLGAKDD  244 (325)
T ss_pred             ---HHHHHHHhC--------CcC-------CCCCCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence               111111000        000       011344568889999999999999997643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.80  E-value=9.2e-20  Score=123.90  Aligned_cols=124  Identities=19%  Similarity=0.188  Sum_probs=86.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++.......  .......|+..|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       148 ill~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--  223 (297)
T cd06659         148 ILLTLDGRVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--  223 (297)
T ss_pred             eEEccCCcEEEeechhHhhccccc--ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--
Confidence            578899999999999987653222  1223356888999999998878889999999999999999999998642211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      ..............               .........+.+++.+||+.+|.+||++.++++.
T Consensus       224 ~~~~~~~~~~~~~~---------------~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         224 QAMKRLRDSPPPKL---------------KNAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHHHHHhccCCCCc---------------cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            11111110000000               0011234567889999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.80  E-value=9.3e-21  Score=130.24  Aligned_cols=120  Identities=21%  Similarity=0.237  Sum_probs=85.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++.......  ......|++.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       127 Ill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--  202 (325)
T cd05594         127 LMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--  202 (325)
T ss_pred             EEECCCCCEEEecCCCCeecCCCCc--ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--
Confidence            6788999999999999875422111  122346899999999998888899999999999999999999998643211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                      .....+.   ....         .      .+......+.+++.+||+.||.+|+     ++.++++
T Consensus       203 ~~~~~i~---~~~~---------~------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         203 KLFELIL---MEEI---------R------FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             HHHHHHh---cCCC---------C------CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            0111110   0000         0      0112345688899999999999997     8888874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.80  E-value=1.5e-19  Score=122.86  Aligned_cols=123  Identities=17%  Similarity=0.186  Sum_probs=86.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++........  ......+++.|++||.+.+..++.++|+||+|++++++++|..||........
T Consensus       146 ili~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~  223 (297)
T cd06656         146 ILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA  223 (297)
T ss_pred             EEECCCCCEEECcCccceEccCCcc--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh
Confidence            5788899999999999877543221  12234578899999998888888999999999999999999999864321110


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..             ....   .. ......+...+..+.+++.+||..+|++||++.++++
T Consensus       224 ~~-------------~~~~---~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         224 LY-------------LIAT---NG-TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             ee-------------eecc---CC-CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            00             0000   00 0000011233456788999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.80  E-value=1.8e-19  Score=120.61  Aligned_cols=123  Identities=22%  Similarity=0.188  Sum_probs=81.5

Q ss_pred             CccCCCCceEEcccccceecCCCC-CcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGD-DSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...... .........++..|+|||++.+..++.++|+||+|++++++++|..||.....  
T Consensus       137 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~--  214 (266)
T cd06651         137 ILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA--  214 (266)
T ss_pred             EEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch--
Confidence            578889999999999987653211 11111224578889999998888888999999999999999999999864321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                         ...+........    .+.         .+......+..++ .||..+|++||++.|++.
T Consensus       215 ---~~~~~~~~~~~~----~~~---------~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         215 ---MAAIFKIATQPT----NPQ---------LPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             ---HHHHHHHhcCCC----CCC---------CchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence               011111000000    000         0112334455555 788899999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.80  E-value=3.1e-19  Score=119.04  Aligned_cols=126  Identities=23%  Similarity=0.409  Sum_probs=88.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||.+......... ......++..|++||++.+..++.++|+||+|++++++++ |..||...... 
T Consensus       133 i~i~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-  210 (260)
T cd05073         133 ILVSASLVCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-  210 (260)
T ss_pred             EEEcCCCcEEECCCcceeeccCCCcc-cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH-
Confidence            46788899999999999765432211 1122335567999999888788889999999999999998 88888643211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                       .....+......                 +.+...+..+.+++.+||+.+|++||++.++...|+.
T Consensus       211 -~~~~~~~~~~~~-----------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         211 -EVIRALERGYRM-----------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             -HHHHHHhCCCCC-----------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence             111111110000                 0111345578899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.79  E-value=1.5e-19  Score=125.75  Aligned_cols=69  Identities=19%  Similarity=0.262  Sum_probs=55.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPT   72 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~   72 (159)
                      ||++.++.+||+|||+++......   ......||+.|+|||++.+..++.++|+||+|+++++++++..++
T Consensus       188 ill~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        188 IFINDVDQVCIGDLGAAQFPVVAP---AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             EEECCCCCEEEecCccccccccCc---ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            578889999999999997542211   122346899999999998888999999999999999999865443

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.79  E-value=3.1e-19  Score=121.87  Aligned_cols=143  Identities=14%  Similarity=0.161  Sum_probs=88.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........  ......+++.|+|||.+.+ ..++.++|+||+|++++++++|..||......+
T Consensus       135 ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~  212 (309)
T cd07872         135 LLINERGELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED  212 (309)
T ss_pred             EEECCCCCEEECccccceecCCCcc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            5788999999999999876532221  1223457889999998765 357889999999999999999999997543221


Q ss_pred             ccHHHHHHhhcC----Ccccchh------hhhcccc-c-hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH--HHH
Q 035782           80 MSLRDWVNKSLS----GELTQVI------DANLARD-E-QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA--KLK  145 (159)
Q Consensus        80 ~~~~~~~~~~~~----~~~~~~~------~~~~~~~-~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~--~l~  145 (159)
                      .  ...+.....    ..+..+.      ....... + ............+.+++.+||+.||.+|||+.|++.  .++
T Consensus       213 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~  290 (309)
T cd07872         213 E--LHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFR  290 (309)
T ss_pred             H--HHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhh
Confidence            1  000100000    0000000      0000000 0 000011124556789999999999999999999985  444


Q ss_pred             HH
Q 035782          146 KI  147 (159)
Q Consensus       146 ~~  147 (159)
                      .+
T Consensus       291 ~~  292 (309)
T cd07872         291 SL  292 (309)
T ss_pred             hc
Confidence            43

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.79  E-value=4.5e-20  Score=127.56  Aligned_cols=117  Identities=20%  Similarity=0.174  Sum_probs=84.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++.......     ....||+.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       162 ILl~~~~~ikL~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--  234 (340)
T PTZ00426        162 LLLDKDGFIKMTDFGFAKVVDTRT-----YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--  234 (340)
T ss_pred             EEECCCCCEEEecCCCCeecCCCc-----ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--
Confidence            678999999999999998763221     2346899999999998888889999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                      .   .........        ..       .+......+.+++.+||+.||.+|+     +++++++
T Consensus       235 ~---~~~~i~~~~--------~~-------~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        235 L---IYQKILEGI--------IY-------FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             H---HHHHHhcCC--------CC-------CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence            0   111100000        00       0112344678899999999999995     8888874

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.79  E-value=9.4e-20  Score=125.49  Aligned_cols=125  Identities=19%  Similarity=0.286  Sum_probs=85.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc-
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE-   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~-   79 (159)
                      ||++.++.+||+|||++........  ......||+.|+|||++.+..++.++|+||+|++++++++|..||......+ 
T Consensus       127 ili~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~  204 (329)
T cd05588         127 VLLDAEGHIKLTDYGMCKEGIRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN  204 (329)
T ss_pred             eEECCCCCEEECcCccccccccCCC--ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccc
Confidence            5788999999999999875321111  1233568999999999988888999999999999999999999996432111 


Q ss_pred             --ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc------HHHHH
Q 035782           80 --MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY------MTDAA  141 (159)
Q Consensus        80 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt------~~~ll  141 (159)
                        .....+..+..       .....       ..+......+.+++.+||+.||.+|++      +.+++
T Consensus       205 ~~~~~~~~~~~~~-------~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~  260 (329)
T cd05588         205 PDQNTEDYLFQVI-------LEKQI-------RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIK  260 (329)
T ss_pred             ccccchHHHHHHH-------HcCCC-------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence              11111111110       00000       011233456889999999999999997      56665

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.79  E-value=1.3e-19  Score=120.42  Aligned_cols=122  Identities=21%  Similarity=0.269  Sum_probs=86.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++++|||.+........  ......|++.|+|||+..+..++.++|+||+|++++++++|..||.....   
T Consensus       131 ili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~---  205 (255)
T cd08219         131 IFLTQNGKVKLGDFGSARLLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW---  205 (255)
T ss_pred             EEECCCCcEEEcccCcceeeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH---
Confidence            5788899999999999977643221  12234578889999998888888999999999999999999999864321   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                        ..............              .+...+..+.+++.+||+.||++|||+.+++..
T Consensus       206 --~~~~~~~~~~~~~~--------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         206 --KNLILKVCQGSYKP--------------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             --HHHHHHHhcCCCCC--------------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence              11111100000000              011334568899999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.79  E-value=5.2e-19  Score=119.34  Aligned_cols=139  Identities=20%  Similarity=0.167  Sum_probs=85.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++.......  .......+++.|+|||++.+. .++.++|+||+|++++++++|..||......+
T Consensus       132 il~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~  209 (285)
T cd07861         132 LLIDNKGVIKLADFGLARAFGIPV--RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID  209 (285)
T ss_pred             EEEcCCCcEEECcccceeecCCCc--ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence            578899999999999997653221  122334568889999987654 56888999999999999999999987532211


Q ss_pred             ccHHHHHHhhc---CCccc---chhh--hhccc--cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSL---SGELT---QVID--ANLAR--DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~---~~~~~---~~~~--~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      . .........   ...+.   .+.+  .....  ..............+.+++.+||+.||++|||+.+++.
T Consensus       210 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         210 Q-LFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             H-HHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            1 000000000   00000   0000  00000  00000001124567789999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.79  E-value=4.1e-19  Score=118.79  Aligned_cols=123  Identities=23%  Similarity=0.248  Sum_probs=86.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCc----ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS----VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      |+++.++.+||+|||.++........    .......|+..|++||.+.+..++.++|+||+|++++++++|..||....
T Consensus       137 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  216 (267)
T cd06628         137 ILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT  216 (267)
T ss_pred             EEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc
Confidence            57889999999999998776422111    11122347788999999888788889999999999999999999986532


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..    .. +.....     ...+.         .+...+..+.+++.+||+.||.+||++.++++
T Consensus       217 ~~----~~-~~~~~~-----~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         217 QL----QA-IFKIGE-----NASPE---------IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HH----HH-HHHHhc-----cCCCc---------CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            11    00 000000     00000         11234567889999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.79  E-value=3.2e-19  Score=120.35  Aligned_cols=140  Identities=18%  Similarity=0.161  Sum_probs=84.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++.......  ......++..|+|||.+.+. .++.++|+||+|++++++++|..|+.......
T Consensus       130 il~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~  207 (284)
T cd07839         130 LLINKNGELKLADFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  207 (284)
T ss_pred             EEEcCCCcEEECccchhhccCCCCC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH
Confidence            5788899999999999976532221  12234568889999987664 46889999999999999999988853221111


Q ss_pred             ccHHHHHHhhcCCc---c---cchhhhh----ccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGE---L---TQVIDAN----LARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~---~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..+...........   +   ....+..    .................+.+++.+||+.||.+|||+++++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         208 DQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             HHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            11111100000000   0   0000000    00000000001123467889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.79  E-value=1.6e-19  Score=120.08  Aligned_cols=122  Identities=33%  Similarity=0.508  Sum_probs=86.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++......     ......+..|++||...+..++.+.|+||+|++++++++ |..||.......
T Consensus       131 ili~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~  205 (254)
T cd05083         131 ILVSEDGVAKVSDFGLARVGSMG-----VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE  205 (254)
T ss_pred             EEEcCCCcEEECCCccceecccc-----CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH
Confidence            57788899999999998764321     111234567999999887788899999999999999997 888886532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                        ....+..            .....     .+...+..+.+++.+||+.+|.+||++.+++..|++
T Consensus       206 --~~~~~~~------------~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         206 --VKECVEK------------GYRME-----PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             --HHHHHhC------------CCCCC-----CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence              1111110            00000     012345678899999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=1.5e-19  Score=128.22  Aligned_cols=118  Identities=26%  Similarity=0.330  Sum_probs=88.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||+.+.|.|||+|||.+..+.+      .+.++|||.|||||++.   .+.|+.++||||+|++.-|+..+++|+-.+  
T Consensus       157 ILLse~g~VKLaDFGSAsi~~P------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM--  228 (948)
T KOG0577|consen  157 ILLSEPGLVKLADFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--  228 (948)
T ss_pred             eEecCCCeeeeccccchhhcCc------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc--
Confidence            7899999999999999987642      33478999999999864   347999999999999999999999885321  


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      +.++-.-.+.+.-++.++                ..+....+.+++..||+.-|.+|||.+++++
T Consensus       229 NAMSALYHIAQNesPtLq----------------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  229 NAMSALYHIAQNESPTLQ----------------SNEWSDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             hHHHHHHHHHhcCCCCCC----------------CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence            222222222222222111                2356677999999999999999999998874

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.79  E-value=4.5e-19  Score=117.96  Aligned_cols=121  Identities=22%  Similarity=0.310  Sum_probs=86.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++........  ......+++.|+|||+..+..++.++|+||+|++++++++|..||......  
T Consensus       133 il~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~--  208 (257)
T cd08223         133 VFLTRTNIIKVGDLGIARVLENQCD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN--  208 (257)
T ss_pred             EEEecCCcEEEecccceEEecccCC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--
Confidence            5778889999999999987643221  223345788999999988888888999999999999999999998642211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                         ............        .      .+...+..+.+++.+||+.+|.+|||+.++++
T Consensus       209 ---~~~~~~~~~~~~--------~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         209 ---SLVYRIIEGKLP--------P------MPKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             ---HHHHHHHhcCCC--------C------CccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence               111110110000        0      01234567889999999999999999999885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.79  E-value=2.5e-19  Score=120.75  Aligned_cols=122  Identities=22%  Similarity=0.262  Sum_probs=83.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC----CccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE----GIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      |+++.++.+||+|||++.......   ..+...++..|++||.+.+    ..++.++|+||+|++++++++|..||....
T Consensus       135 il~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  211 (283)
T cd06617         135 VLINRNGQVKLCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK  211 (283)
T ss_pred             EEECCCCCEEEeeccccccccccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc
Confidence            578889999999999997653221   1223457888999998754    346788999999999999999999985421


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..........    ...        ....+     ....+..+.+++.+||..+|++||++.+++.
T Consensus       212 ~~~~~~~~~~----~~~--------~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         212 TPFQQLKQVV----EEP--------SPQLP-----AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             cCHHHHHHHH----hcC--------CCCCC-----ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1100010000    000        00000     0123457889999999999999999999985

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.79  E-value=4.5e-19  Score=119.77  Aligned_cols=141  Identities=18%  Similarity=0.162  Sum_probs=88.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |++++++.+||+|||++........ .......++..|+|||++.+. .++.++|+||+|++++++++|..||......+
T Consensus       131 i~~~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~  209 (288)
T cd07833         131 ILVSESGVLKLCDFGFARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID  209 (288)
T ss_pred             eEECCCCCEEEEeeecccccCCCcc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            5788899999999999877643322 122335678889999998887 78899999999999999999999986432211


Q ss_pred             ccHH-HHHHhhcCCcccchh--hhhccc-------cch--hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLR-DWVNKSLSGELTQVI--DANLAR-------DEQ--SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~-~~~~~~~~~~~~~~~--~~~~~~-------~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .... ...............  ++....       ...  ....+...+..+.+++.+||..+|++|||+.++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         210 QLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            1000 000000000000000  000000       000  00111223677999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.79  E-value=2.4e-19  Score=119.83  Aligned_cols=125  Identities=19%  Similarity=0.193  Sum_probs=85.4

Q ss_pred             CccCCCCceEEcccccceecCCCCC----cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD----SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      |+++.++.+||+|||++........    ........++..|+|||+..+..++.++|+||+|++++++++|..||....
T Consensus       133 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~  212 (265)
T cd06631         133 VMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD  212 (265)
T ss_pred             EEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC
Confidence            5778899999999999876421111    111123457889999999988888899999999999999999999986432


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...  ........ ....     +.         .+......+.+++.+||+.+|++||++.+++.
T Consensus       213 ~~~--~~~~~~~~-~~~~-----~~---------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         213 RLA--AMFYIGAH-RGLM-----PR---------LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             hHH--HHHHhhhc-cCCC-----CC---------CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            110  00000000 0000     00         11134556889999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.79  E-value=2.5e-19  Score=119.17  Aligned_cols=122  Identities=26%  Similarity=0.347  Sum_probs=87.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......+++.|.+||...+..++.++|+||+|++++++++|..||.....   
T Consensus       132 i~~~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---  206 (256)
T cd08221         132 IFLTKAGLIKLGDFGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP---  206 (256)
T ss_pred             EEEeCCCCEEECcCcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH---
Confidence            5778889999999999987643321  22335688899999998887788899999999999999999999854221   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                        ..............              .+...+..+.+++.+||..+|++||++.++++.
T Consensus       207 --~~~~~~~~~~~~~~--------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         207 --LNLVVKIVQGNYTP--------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             --HHHHHHHHcCCCCC--------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence              11111111111100              012345568889999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.79  E-value=1.6e-19  Score=121.85  Aligned_cols=127  Identities=22%  Similarity=0.277  Sum_probs=87.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++.......    .....|+..|++||++.+..++.++|+||+|++++++++|..||........
T Consensus       135 il~~~~~~~~l~d~gl~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~  210 (284)
T cd06620         135 ILVNSRGQIKLCDFGVSGELINSI----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDD  210 (284)
T ss_pred             EEECCCCcEEEccCCcccchhhhc----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhh
Confidence            567888999999999986543211    1234688899999998877888899999999999999999999875432110


Q ss_pred             ------cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           81 ------SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        81 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                            ..........            ...... ......+..+.+++.+||+.||++|||+.|+++..
T Consensus       211 ~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         211 GQDDPMGILDLLQQIV------------QEPPPR-LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             hhhhhhHHHHHHHHHh------------hccCCC-CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence                  0111111111            000000 00112456788999999999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.79  E-value=3.6e-19  Score=119.78  Aligned_cols=121  Identities=18%  Similarity=0.270  Sum_probs=86.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++++|||++.......  .......++..|++||+..+..++.++|+||||++++++++|..|+........
T Consensus       132 i~i~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~  209 (277)
T cd06642         132 VLLSEQGDVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV  209 (277)
T ss_pred             EEEeCCCCEEEccccccccccCcc--hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH
Confidence            567888999999999987654221  122234578889999998888888899999999999999999999764321110


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ....    .....    +.         .....+..+.+++.+||+.+|++||++.++++
T Consensus       210 --~~~~----~~~~~----~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         210 --LFLI----PKNSP----PT---------LEGQYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             --Hhhh----hcCCC----CC---------CCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence              0000    00000    00         01134567889999999999999999999997

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.79  E-value=2e-19  Score=122.10  Aligned_cols=124  Identities=25%  Similarity=0.256  Sum_probs=83.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc----cccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI----VSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~----~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      |+++.++.+||+|||++..+.....   .....++..|+|||.+.+..    ++.++|+||||++++++++|..||....
T Consensus       146 ill~~~~~~kL~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  222 (296)
T cd06618         146 ILLDASGNVKLCDFGISGRLVDSKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK  222 (296)
T ss_pred             EEEcCCCCEEECccccchhccCCCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch
Confidence            5788899999999999876532221   12234678899999876543    6788999999999999999999986422


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      ...    +............     .       +.....+..+.+++.+||+.||.+||++.+++..
T Consensus       223 ~~~----~~~~~~~~~~~~~-----~-------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         223 TEF----EVLTKILQEEPPS-----L-------PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             hHH----HHHHHHhcCCCCC-----C-------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            110    1111101000000     0       0001234578999999999999999999999743

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.79  E-value=3.9e-19  Score=119.98  Aligned_cols=139  Identities=19%  Similarity=0.181  Sum_probs=86.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.++|+|||++........  ......++..|++||++.+. .++.++|+||||++++++++|..||......+
T Consensus       131 i~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~  208 (286)
T cd07846         131 ILVSQSGVVKLCDFGFARTLAAPGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID  208 (286)
T ss_pred             EEECCCCcEEEEeeeeeeeccCCcc--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH
Confidence            5788899999999999877543221  22334578899999987653 46788999999999999999998886432111


Q ss_pred             c--cHHHHHHhhcCCcccchh------hhh----ccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 M--SLRDWVNKSLSGELTQVI------DAN----LARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~--~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  ........ .........      ...    ..............+..+.+++.+||+.+|++||++.++++
T Consensus       209 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         209 QLYHIIKCLGN-LIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HHHHHHHHhCC-CchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            0  00000000 000000000      000    00000011112245677999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.79  E-value=4.5e-19  Score=117.85  Aligned_cols=124  Identities=33%  Similarity=0.498  Sum_probs=85.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.++|+|||++........... ....+++.|++||...+..++.++|+|++|++++++++ |..||.....  
T Consensus       134 il~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--  210 (258)
T smart00219      134 CLVGENLVVKISDFGLSRDLYDDDYYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--  210 (258)
T ss_pred             EEEccCCeEEEcccCCceeccccccccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence            5788889999999999987654322211 12236678999999877788899999999999999998 7777754211  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                      .........   ...        .      ..+...+..+.+++.+||..||.+|||+.++++.|
T Consensus       211 ~~~~~~~~~---~~~--------~------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      211 EEVLEYLKK---GYR--------L------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHHhc---CCC--------C------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            111111110   000        0      00112456788999999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.79  E-value=1.7e-19  Score=121.88  Aligned_cols=123  Identities=20%  Similarity=0.219  Sum_probs=85.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||.+.......  .......|+..|++||...+..++.++|+||+|++++++++|..||.....  .
T Consensus       146 il~~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--~  221 (285)
T cd06648         146 ILLTSDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--L  221 (285)
T ss_pred             EEEcCCCcEEEcccccchhhccCC--cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--H
Confidence            578889999999999886543211  112234578899999998887888999999999999999999999854211  0


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ............        ..       ..+...+..+.+++.+||..+|++||++.++++
T Consensus       222 ~~~~~~~~~~~~--------~~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         222 QAMKRIRDNLPP--------KL-------KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHHHHHhcCCC--------CC-------cccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            000101100000        00       001124467899999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.79  E-value=8.9e-19  Score=118.00  Aligned_cols=138  Identities=19%  Similarity=0.146  Sum_probs=88.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||.+.......  .......++..|++||.+.+. .++.++|+||+|++++++++|+.||......+
T Consensus       129 ili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~  206 (283)
T cd05118         129 LLINTEGVLKLADFGLARSFGSPV--RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID  206 (283)
T ss_pred             EEECCCCcEEEeeeeeeEecCCCc--ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            578888999999999997764332  112224577889999987766 67889999999999999999999986532211


Q ss_pred             ccHHHHHHhhcC----Ccccchhh---hhccccc-----hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS----GELTQVID---ANLARDE-----QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~----~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ....+.....    ..+..+..   ......+     .........+..+.+++..||+.||.+||++++++.
T Consensus       207 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         207 --QLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             --HHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence              1111111000    00111000   0000000     000112245678999999999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.79  E-value=4.5e-19  Score=119.66  Aligned_cols=138  Identities=19%  Similarity=0.184  Sum_probs=86.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........  ......++..|++||++.+ ..++.++|+||+|++++++++|..||......+
T Consensus       131 il~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~  208 (286)
T cd07847         131 ILITKQGQIKLCDFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD  208 (286)
T ss_pred             EEEcCCCcEEECccccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence            5788899999999999987643321  1222346788999998765 357889999999999999999999997543221


Q ss_pred             ccHHHHHHhhcCC---cccchhh------hhccccc----hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSG---ELTQVID------ANLARDE----QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~---~~~~~~~------~~~~~~~----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  ...+......   ......+      ....+.+    .........+..+.+++.+||+.+|++||++.+++.
T Consensus       209 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         209 Q--LYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             H--HHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            1  1011100000   0000000      0000000    000001123567889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.79  E-value=4.6e-19  Score=120.60  Aligned_cols=146  Identities=16%  Similarity=0.147  Sum_probs=89.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........  ......+++.|+|||++.+. .++.++|+||+|++++++++|..||......+
T Consensus       135 il~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~  212 (301)
T cd07873         135 LLINERGELKLADFGLARAKSIPTK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE  212 (301)
T ss_pred             EEECCCCcEEECcCcchhccCCCCC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            5788899999999999876432221  12224568899999987654 57788999999999999999999987532211


Q ss_pred             ccHHHHHHhhcC----Ccccchhhhh------ccccch--hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH--HHH
Q 035782           80 MSLRDWVNKSLS----GELTQVIDAN------LARDEQ--SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA--KLK  145 (159)
Q Consensus        80 ~~~~~~~~~~~~----~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~--~l~  145 (159)
                        ....+.....    ..+.......      ......  ...........+.+++.+|++.||.+|||+.+++.  .++
T Consensus       213 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~  290 (301)
T cd07873         213 --QLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFH  290 (301)
T ss_pred             --HHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence              1111111111    1111111100      000000  00001123456789999999999999999999985  554


Q ss_pred             HHHHH
Q 035782          146 KIKEK  150 (159)
Q Consensus       146 ~~~~~  150 (159)
                      .+.+.
T Consensus       291 ~~~~~  295 (301)
T cd07873         291 CLGER  295 (301)
T ss_pred             cccch
Confidence            44433

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.79  E-value=6.1e-19  Score=122.54  Aligned_cols=137  Identities=18%  Similarity=0.122  Sum_probs=87.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||+++......   ......++..|+|||.+.+..++.++|+||+|++++++++|..||......+ 
T Consensus       149 il~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~-  224 (353)
T cd07850         149 IVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID-  224 (353)
T ss_pred             EEECCCCCEEEccCccceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH-
Confidence            578899999999999998753221   1223457889999999988888999999999999999999999986432111 


Q ss_pred             cHHHHHHhhcCCcc-----------cchhh-----------hhccccchh---hhhchHHHHHHHHHHhhhcCCCCCCCC
Q 035782           81 SLRDWVNKSLSGEL-----------TQVID-----------ANLARDEQS---FFVKMDCLSSIMHLALDCCMESPDQRI  135 (159)
Q Consensus        81 ~~~~~~~~~~~~~~-----------~~~~~-----------~~~~~~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~Rp  135 (159)
                      .+..... ......           .....           .........   .......+..+.+++.+||+.||++||
T Consensus       225 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  303 (353)
T cd07850         225 QWNKIIE-QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRI  303 (353)
T ss_pred             HHHHHHH-hcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCc
Confidence            0100000 000000           00000           000000000   000113456688999999999999999


Q ss_pred             cHHHHHH
Q 035782          136 YMTDAAA  142 (159)
Q Consensus       136 t~~~ll~  142 (159)
                      |+.|++.
T Consensus       304 t~~eiL~  310 (353)
T cd07850         304 SVDDALQ  310 (353)
T ss_pred             CHHHHhc
Confidence            9999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=6.2e-20  Score=127.25  Aligned_cols=126  Identities=24%  Similarity=0.287  Sum_probs=87.0

Q ss_pred             CccCCCCceEEcccccceecCCCC---------------------------CcccccccccccccccccccCCCccccch
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGD---------------------------DSVTQTMTMATIGYMAPEYGSEGIVSTKC   53 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~---------------------------~~~~~~~~~gt~~~~~pe~~~~~~~~~~~   53 (159)
                      ||++.++.+||+|||++.......                           .........||+.|+|||++.+..++.++
T Consensus       132 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  211 (350)
T cd05573         132 ILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLEC  211 (350)
T ss_pred             eEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCce
Confidence            688999999999999997654322                           00112335689999999999888899999


Q ss_pred             hhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC
Q 035782           54 DVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ  133 (159)
Q Consensus        54 dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  133 (159)
                      |+||+||+++++++|..||.......     ....... ....     +. .    +.....+..+.+++.+|+. ||.+
T Consensus       212 DiwSlG~il~ell~g~~Pf~~~~~~~-----~~~~i~~-~~~~-----~~-~----p~~~~~~~~~~~li~~ll~-dp~~  274 (350)
T cd05573         212 DWWSLGVILYEMLYGFPPFYSDTLQE-----TYNKIIN-WKES-----LR-F----PPDPPVSPEAIDLICRLLC-DPED  274 (350)
T ss_pred             eeEecchhhhhhccCCCCCCCCCHHH-----HHHHHhc-cCCc-----cc-C----CCCCCCCHHHHHHHHHHcc-Chhh
Confidence            99999999999999999986532111     0110000 0000     00 0    0001135678889999997 9999


Q ss_pred             CCc-HHHHHHH
Q 035782          134 RIY-MTDAAAK  143 (159)
Q Consensus       134 Rpt-~~~ll~~  143 (159)
                      |++ +.++++.
T Consensus       275 R~~s~~~ll~h  285 (350)
T cd05573         275 RLGSFEEIKSH  285 (350)
T ss_pred             cCCCHHHHhcC
Confidence            999 9999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.78  E-value=5.2e-19  Score=120.77  Aligned_cols=136  Identities=18%  Similarity=0.242  Sum_probs=86.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++.......    .....++..|++||.+.+..++.++|+||+|++++++++|..||......  
T Consensus       131 il~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--  204 (308)
T cd06615         131 ILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--  204 (308)
T ss_pred             EEEecCCcEEEccCCCcccccccc----cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--
Confidence            577889999999999987653211    22346788999999988777888999999999999999999998643211  


Q ss_pred             cHHHHHHhhcCCcc---------------------cchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHH
Q 035782           81 SLRDWVNKSLSGEL---------------------TQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTD  139 (159)
Q Consensus        81 ~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~  139 (159)
                      ..............                     ....+..........+ .......+.+++.+||..+|++|||+.+
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~  283 (308)
T cd06615         205 ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLP-SGAFSDEFQDFVDKCLKKNPKERADLKE  283 (308)
T ss_pred             hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCc-CcccCHHHHHHHHHHccCChhhCcCHHH
Confidence            11111111000000                     0000000000000000 0113456889999999999999999999


Q ss_pred             HHHH
Q 035782          140 AAAK  143 (159)
Q Consensus       140 ll~~  143 (159)
                      +++.
T Consensus       284 ll~~  287 (308)
T cd06615         284 LTKH  287 (308)
T ss_pred             HhcC
Confidence            9865

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.78  E-value=4e-19  Score=133.55  Aligned_cols=132  Identities=19%  Similarity=0.197  Sum_probs=90.1

Q ss_pred             CccCCCCceEEcccccceecCCCCC----------------cccccccccccccccccccCCCccccchhhHhHHHHHHH
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD----------------SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLME   64 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~----------------~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~   64 (159)
                      ||++.++.+||+|||+++.......                .......+||+.|+|||+..+..++.++|+||+|+++++
T Consensus       144 ILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyE  223 (932)
T PRK13184        144 ILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQ  223 (932)
T ss_pred             EEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHH
Confidence            6788999999999999986521110                001122468999999999988888999999999999999


Q ss_pred             HHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-HHHHHHH
Q 035782           65 TFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-MTDAAAK  143 (159)
Q Consensus        65 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-~~~ll~~  143 (159)
                      +++|..||...........    ...       ..+      .........+..+.+++.+||..||++|++ +.++++.
T Consensus       224 LLTG~~PF~~~~~~ki~~~----~~i-------~~P------~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~  286 (932)
T PRK13184        224 MLTLSFPYRRKKGRKISYR----DVI-------LSP------IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQD  286 (932)
T ss_pred             HHHCCCCCCCcchhhhhhh----hhc-------cCh------hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            9999999865221111100    000       000      000001134556888999999999999965 6677777


Q ss_pred             HHHHHH
Q 035782          144 LKKIKE  149 (159)
Q Consensus       144 l~~~~~  149 (159)
                      |+...+
T Consensus       287 Le~~lq  292 (932)
T PRK13184        287 LEPHLQ  292 (932)
T ss_pred             HHHHHh
Confidence            777655

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.78  E-value=9.4e-20  Score=119.20  Aligned_cols=70  Identities=26%  Similarity=0.373  Sum_probs=62.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||+|.+|.+||+|||+|+.....  .  . +.||||-|+|||++.+.+|+.++|.|+||+++|||+.|.+||...
T Consensus       175 iLlD~~G~iKitDFGFAK~v~~r--T--~-TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~  244 (355)
T KOG0616|consen  175 LLLDQNGHIKITDFGFAKRVSGR--T--W-TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD  244 (355)
T ss_pred             eeeccCCcEEEEeccceEEecCc--E--E-EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence            68999999999999999887432  1  2 257999999999999999999999999999999999999999753

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.78  E-value=1.4e-19  Score=125.03  Aligned_cols=125  Identities=24%  Similarity=0.325  Sum_probs=87.4

Q ss_pred             CccCCCCceEEcccccceecCCCC---CcccccccccccccccccccCCCc----cccchhhHhHHHHHHHHHhcCCCCc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGD---DSVTQTMTMATIGYMAPEYGSEGI----VSTKCDVYSYGVLLMETFTRKKPTD   73 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~gt~~~~~pe~~~~~~----~~~~~dv~s~g~~~~~~~~~~~p~~   73 (159)
                      +|++.+|+|||+|||++..+..+.   .........|||.|+|||.+.++.    .+.+.|||++|+++|.++.|+.||-
T Consensus       241 LLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~  320 (576)
T KOG0585|consen  241 LLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFF  320 (576)
T ss_pred             eEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcc
Confidence            588999999999999998763221   111223357999999999887732    3568999999999999999999985


Q ss_pred             ccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           74 EMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      ...     ....+.+.+..             +-.++...++.+.+.+|+.++|..||.+|.+..+|...
T Consensus       321 ~~~-----~~~l~~KIvn~-------------pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H  372 (576)
T KOG0585|consen  321 DDF-----ELELFDKIVND-------------PLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH  372 (576)
T ss_pred             cch-----HHHHHHHHhcC-------------cccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence            421     11111111111             11111122567789999999999999999999988654

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.78  E-value=9.3e-19  Score=118.12  Aligned_cols=138  Identities=18%  Similarity=0.183  Sum_probs=87.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||.+........   .....++..|++||++.+..++.++|+||+|++++++++|..||......+ 
T Consensus       138 ili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~-  213 (287)
T cd07838         138 ILVTSDGQVKIADFGLARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD-  213 (287)
T ss_pred             EEEccCCCEEEeccCcceeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH-
Confidence            5788889999999999977643221   122346788999999888888899999999999999999998886532211 


Q ss_pred             cHHHHHHhhcCCc---ccchh---hhhccccch--hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGE---LTQVI---DANLARDEQ--SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~---~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .............   +....   .........  ...........+.+++.+||+.||++||++.+++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         214 QLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             HHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            1111111110000   00000   000000000  00111234567889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.78  E-value=8.8e-19  Score=118.01  Aligned_cols=135  Identities=18%  Similarity=0.141  Sum_probs=84.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++. +.+||+|||++........   .....++..|++||++.. ..++.++|+||+|++++++++|..||......+
T Consensus       131 i~l~~-~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~  206 (282)
T cd07831         131 ILIKD-DILKLADFGSCRGIYSKPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD  206 (282)
T ss_pred             EEEcC-CCeEEEecccccccccCCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH
Confidence            46677 9999999999976543221   122457889999997644 456789999999999999999999986532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccc-------cc-----hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLAR-------DE-----QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ...............+ ......       .+     .........+..+.+++.+||..+|++||++.+++.
T Consensus       207 --~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         207 --QIAKIHDVLGTPDAEV-LKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             --HHHHHHHHcCCCCHHH-HHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence              1111111111100000 000000       00     000111234678999999999999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=2.5e-19  Score=120.65  Aligned_cols=124  Identities=24%  Similarity=0.272  Sum_probs=83.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      |+++.++.++|+|||++.......  .......+++.|++||.+.     +..++.++|+||+|++++++++|..||...
T Consensus       134 ili~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~  211 (280)
T cd06611         134 ILLTLDGDVKLADFGVSAKNKSTL--QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL  211 (280)
T ss_pred             EEECCCCCEEEccCccchhhcccc--cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC
Confidence            577889999999999986643221  1223345788999999864     334677899999999999999999998653


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      ...     ..........            ......+...+..+.+++.+||+.+|++||++.++++.
T Consensus       212 ~~~-----~~~~~~~~~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         212 NPM-----RVLLKILKSE------------PPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             CHH-----HHHHHHhcCC------------CCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            211     1111100000            00001112344568899999999999999999999853

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.78  E-value=2e-19  Score=123.77  Aligned_cols=121  Identities=21%  Similarity=0.270  Sum_probs=82.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc-c
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG-E   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~-~   79 (159)
                      ||++.++.+||+|||++........  .....+||+.|+|||++.+..++.++|+||+|++++++++|..||...... .
T Consensus       127 ili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~  204 (327)
T cd05617         127 VLLDADGHIKLTDYGMCKEGLGPGD--TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPD  204 (327)
T ss_pred             EEEeCCCCEEEeccccceeccCCCC--ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcc
Confidence            5788999999999999875322111  123356899999999998888899999999999999999999999643221 1


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                      ...........            ...+.  ..+...+..+.+++.+||+.||.+|+++
T Consensus       205 ~~~~~~~~~~~------------~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         205 MNTEDYLFQVI------------LEKPI--RIPRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             cccHHHHHHHH------------HhCCC--CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            11111111100            00000  0111334567889999999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=4.5e-19  Score=124.20  Aligned_cols=117  Identities=21%  Similarity=0.294  Sum_probs=89.1

Q ss_pred             ccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            2 LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         2 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ++.+-|-|||+|||++-.+.++.   ..++.||+..|-|||++.+..| .+++||||+|+++|-+++|+.||+.....+.
T Consensus       151 FFEKlGlVKLTDFGFSNkf~PG~---kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET  227 (864)
T KOG4717|consen  151 FFEKLGLVKLTDFGFSNKFQPGK---KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET  227 (864)
T ss_pred             EeeecCceEeeeccccccCCCcc---hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh
Confidence            45567899999999998876544   3455789999999999999877 4789999999999999999999987543221


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      -             ..+.|     ..+  ..|......+.+|+..||..||.+|.+.++|.
T Consensus       228 L-------------TmImD-----CKY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~  268 (864)
T KOG4717|consen  228 L-------------TMIMD-----CKY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIV  268 (864)
T ss_pred             h-------------hhhhc-----ccc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHh
Confidence            1             11111     000  01235566789999999999999999999887

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.78  E-value=3.4e-19  Score=117.89  Aligned_cols=122  Identities=21%  Similarity=0.229  Sum_probs=85.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||.+........   .....++..|++||.+.+..++.++|+||+|++++++++|..||....... 
T Consensus       129 i~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-  204 (253)
T cd05122         129 ILLTSDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK-  204 (253)
T ss_pred             EEEccCCeEEEeecccccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH-
Confidence            5788899999999999877643321   223457888999999887778889999999999999999999986432110 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .......   .....+            ......+..+.+++.+||+.||++|||+.+++.
T Consensus       205 -~~~~~~~---~~~~~~------------~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         205 -ALFKIAT---NGPPGL------------RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             -HHHHHHh---cCCCCc------------CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             0000000   000000            001112457889999999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.78  E-value=6.5e-20  Score=125.87  Aligned_cols=116  Identities=20%  Similarity=0.201  Sum_probs=82.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||+++.......  ......|++.|+|||++.+..++.++|+||+|++++++++|..||.....   
T Consensus       127 Ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---  201 (321)
T cd05603         127 ILLDSQGHVVLTDFGLCKEGVEPEE--TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV---  201 (321)
T ss_pred             eEECCCCCEEEccCCCCccCCCCCC--ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH---
Confidence            6789999999999999875322111  22335689999999999888889999999999999999999999865321   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT  138 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  138 (159)
                        ...........        +       ..+......+.+++.+||+.||.+|+++.
T Consensus       202 --~~~~~~i~~~~--------~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         202 --SQMYDNILHKP--------L-------QLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             --HHHHHHHhcCC--------C-------CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence              11111111000        0       01113345688899999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=6.6e-19  Score=118.43  Aligned_cols=122  Identities=22%  Similarity=0.320  Sum_probs=84.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.++|+|||++........  ......|+..|+|||.+.+. .++.++|+||+|++++++++|..||.......
T Consensus       132 i~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~  209 (277)
T cd06917         132 ILVTNTGNVKLCDFGVAALLNQNSS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR  209 (277)
T ss_pred             EEEcCCCCEEEccCCceeecCCCcc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence            5788899999999999987653331  12334588899999987654 46789999999999999999999986532111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                           .... ...    ...+.+..        ...+..+.+++.+||+.||++||++.+++.
T Consensus       210 -----~~~~-~~~----~~~~~~~~--------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         210 -----AMML-IPK----SKPPRLED--------NGYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             -----hhhc-ccc----CCCCCCCc--------ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence                 1100 000    00000100        013457889999999999999999999975

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.78  E-value=1.9e-19  Score=125.54  Aligned_cols=86  Identities=21%  Similarity=0.266  Sum_probs=63.0

Q ss_pred             cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc--cHHHHHHhhcCCcccchhhhhccccchhh
Q 035782           32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM--SLRDWVNKSLSGELTQVIDANLARDEQSF  109 (159)
Q Consensus        32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (159)
                      .+|||-|+|||++.+.+|+...|.||+||++|||+.|.+||....+...  .+..|......              +   
T Consensus       348 tVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~f--------------P---  410 (550)
T KOG0605|consen  348 TVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKF--------------P---  410 (550)
T ss_pred             ccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccC--------------C---
Confidence            4699999999999999999999999999999999999999987543221  11122111110              0   


Q ss_pred             hhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782          110 FVKMDCLSSIMHLALDCCMESPDQRIY  136 (159)
Q Consensus       110 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt  136 (159)
                       ....+..+.++++.+|+. ||.+|.-
T Consensus       411 -~~~~~s~eA~DLI~rll~-d~~~RLG  435 (550)
T KOG0605|consen  411 -EEVDLSDEAKDLITRLLC-DPENRLG  435 (550)
T ss_pred             -CcCcccHHHHHHHHHHhc-CHHHhcC
Confidence             011334678899999999 9999965

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.78  E-value=5.1e-19  Score=118.66  Aligned_cols=128  Identities=24%  Similarity=0.332  Sum_probs=84.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc--cccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI--VSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~--~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      |+++.++.++++|||++................++..|++||......  ++.++|+||+|++++++++|..||..... 
T Consensus       139 il~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-  217 (272)
T cd06629         139 LLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-  217 (272)
T ss_pred             EEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-
Confidence            577889999999999987653221111222345788899999876644  78889999999999999999999853211 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                         ...... .........+...         .....+..+.+++.+||..+|++|||+.++++
T Consensus       218 ---~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         218 ---IAAMFK-LGNKRSAPPIPPD---------VSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             ---HHHHHH-hhccccCCcCCcc---------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence               111110 0000000000000         01134567889999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.78  E-value=2.9e-19  Score=130.47  Aligned_cols=132  Identities=21%  Similarity=0.355  Sum_probs=102.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||+.....+||.|||+++.....+.........-.+.|+|-|..+...|+.++|||+||+++||+++ |..|+.++...+
T Consensus       829 VLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e  908 (1177)
T KOG1025|consen  829 VLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE  908 (1177)
T ss_pred             eeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH
Confidence            5788889999999999998765554443333334567999999999999999999999999999987 889987654322


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                                    +.+++.     ...+..+|+.+...++-+|.+||..|+..||+++++...+.++.+..
T Consensus       909 --------------I~dlle-----~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp  961 (1177)
T KOG1025|consen  909 --------------IPDLLE-----KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP  961 (1177)
T ss_pred             --------------hhHHHh-----ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence                          122221     22235567789999999999999999999999999999888876543

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.78  E-value=7.3e-19  Score=118.83  Aligned_cols=123  Identities=20%  Similarity=0.243  Sum_probs=84.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........   .....|+..|+|||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       133 ili~~~~~~kl~Dfg~~~~~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-  208 (285)
T cd05632         133 ILLDDYGHIRISDLGLAVKIPEGES---IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-  208 (285)
T ss_pred             EEECCCCCEEEecCCcceecCCCCc---ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence            5778889999999999876532221   223468899999999988888899999999999999999999986432110 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll~  142 (159)
                      .. ......+......              .+...+..+.+++..||+.||++||+     +.+++.
T Consensus       209 ~~-~~~~~~~~~~~~~--------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         209 KR-EEVDRRVLETEEV--------------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             HH-HHHHHhhhccccc--------------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence            00 1111100000000              01123456788999999999999999     667764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.78  E-value=3.4e-19  Score=118.54  Aligned_cols=121  Identities=21%  Similarity=0.314  Sum_probs=86.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++........  ......|++.|+|||++.+..++.++|+||||++++++++|..||.....   
T Consensus       132 il~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---  206 (256)
T cd08218         132 IFLTKDGTIKLGDFGIARVLNSTVE--LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM---  206 (256)
T ss_pred             EEEcCCCCEEEeeccceeecCcchh--hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH---
Confidence            5778889999999999977643221  12224578889999998887888899999999999999999999854211   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        .............              ..+......+.+++.+||+.+|++||++.++++
T Consensus       207 --~~~~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         207 --KNLVLKIIRGSYP--------------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             --HHHHHHHhcCCCC--------------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence              1111111111000              011234557889999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.78  E-value=6.8e-19  Score=119.43  Aligned_cols=123  Identities=16%  Similarity=0.185  Sum_probs=85.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......+++.|++||.+....++.++|+||||++++++++|..||........
T Consensus       146 ili~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~  223 (293)
T cd06647         146 ILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA  223 (293)
T ss_pred             EEEcCCCCEEEccCcceeccccccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh
Confidence            4678889999999999876543222  22334578889999998877788999999999999999999999865322110


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..             ....    ........+...+..+.+++..||..+|++||++.+++.
T Consensus       224 ~~-------------~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  268 (293)
T cd06647         224 LY-------------LIAT----NGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  268 (293)
T ss_pred             ee-------------ehhc----CCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            00             0000    000000111234456888999999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.78  E-value=4.1e-20  Score=127.07  Aligned_cols=116  Identities=21%  Similarity=0.204  Sum_probs=82.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++.......  ......|++.|+|||++.+..++.++|+||+|+++++|++|..||......  
T Consensus       127 Ill~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--  202 (325)
T cd05604         127 ILLDSQGHVVLTDFGLCKEGIAQSD--TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA--  202 (325)
T ss_pred             eEECCCCCEEEeecCCcccCCCCCC--CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH--
Confidence            6889999999999999875322111  223356899999999998888899999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT  138 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  138 (159)
                         .........        .+.       ........+.+++.+|+..+|.+||++.
T Consensus       203 ---~~~~~~~~~--------~~~-------~~~~~~~~~~~ll~~ll~~~p~~R~~~~  242 (325)
T cd05604         203 ---EMYDNILHK--------PLV-------LRPGASLTAWSILEELLEKDRQRRLGAK  242 (325)
T ss_pred             ---HHHHHHHcC--------Ccc-------CCCCCCHHHHHHHHHHhccCHHhcCCCC
Confidence               111111100        000       0112345678899999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.78  E-value=4.7e-20  Score=126.98  Aligned_cols=124  Identities=20%  Similarity=0.298  Sum_probs=84.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC------CCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS------EGIVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~------~~~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      ||++.++.+||+|||++......... ......||+.|+|||++.      ...++.++|+||+|++++++++|..||..
T Consensus       133 Ill~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~  211 (330)
T cd05601         133 VLIDRTGHIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHE  211 (330)
T ss_pred             eEECCCCCEEeccCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCC
Confidence            67899999999999999876433222 222346899999999876      34567889999999999999999999865


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ....     .........  ...+     .    .+........+.+++..|+. +|.+|||+.+++.
T Consensus       212 ~~~~-----~~~~~i~~~--~~~~-----~----~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         212 GTSA-----KTYNNIMNF--QRFL-----K----FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             CCHH-----HHHHHHHcC--CCcc-----C----CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            3211     111110000  0000     0    00011234567889999997 9999999999884

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.78  E-value=1.1e-18  Score=120.58  Aligned_cols=141  Identities=19%  Similarity=0.194  Sum_probs=86.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||++......... .......|+..|+|||++.+ ..++.++|+||+|++++++++|..||......
T Consensus       137 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~  216 (336)
T cd07849         137 LLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL  216 (336)
T ss_pred             EEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            57888999999999998765332211 11223467889999998654 46788999999999999999999998643211


Q ss_pred             cccHHHHHHhhcCC----cccchhhhh----ccccc--hhh---hhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           79 EMSLRDWVNKSLSG----ELTQVIDAN----LARDE--QSF---FVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        79 ~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~--~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                        ............    .+..+....    +...+  ...   .........+.+++.+||+.+|.+|||+.+++..
T Consensus       217 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         217 --HQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             --HHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence              111111111110    001000000    00000  000   0001234568899999999999999999999864

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.78  E-value=5.2e-19  Score=119.57  Aligned_cols=123  Identities=21%  Similarity=0.290  Sum_probs=85.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++........   .....|+..|+|||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       133 il~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-  208 (285)
T cd05630         133 ILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-  208 (285)
T ss_pred             EEECCCCCEEEeeccceeecCCCcc---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-
Confidence            5788889999999999876532221   123468899999999988888999999999999999999999997532110 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll~  142 (159)
                      .... ...... ....             ..+......+.+++..||+.||.+|||     +.++++
T Consensus       209 ~~~~-~~~~~~-~~~~-------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         209 KREE-VERLVK-EVQE-------------EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             hHHH-HHhhhh-hhhh-------------hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            0000 000000 0000             001133456789999999999999999     788885

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.78  E-value=1.2e-18  Score=118.01  Aligned_cols=139  Identities=16%  Similarity=0.133  Sum_probs=84.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++.......  ......+++.|+|||...+. .++.++|+||+|++++++++|..||.......
T Consensus       134 il~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~  211 (291)
T cd07870         134 LLISYLGELKLADFGLARAKSIPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF  211 (291)
T ss_pred             EEEcCCCcEEEeccccccccCCCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH
Confidence            5788899999999999876432221  12234568889999987653 56788999999999999999999987533211


Q ss_pred             ccHHHHHHhhcC--------------CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS--------------GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..+... .....              ...........................+.+++.+|+..||++|||+.+++.
T Consensus       212 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         212 EQLEKI-WTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             HHHHHH-HHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            111110 00000              000000000000000000000112456788999999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.78  E-value=7.8e-19  Score=119.83  Aligned_cols=118  Identities=25%  Similarity=0.282  Sum_probs=82.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||++......      ....+++.|+|||++.   ...++.++|+||||++++++++|..||.....
T Consensus       146 Il~~~~~~~kL~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~  219 (307)
T cd06607         146 ILLTEPGTVKLADFGSASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA  219 (307)
T ss_pred             EEECCCCCEEEeecCcceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH
Confidence            57888999999999998765322      1245778899999864   34577899999999999999999999854321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..  ....+..   ....             .......+..+.+++.+||..+|++||++.+++.
T Consensus       220 ~~--~~~~~~~---~~~~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         220 MS--ALYHIAQ---NDSP-------------TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             HH--HHHHHhc---CCCC-------------CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            11  0000000   0000             0001134567899999999999999999999986

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.78  E-value=1.1e-18  Score=119.06  Aligned_cols=142  Identities=18%  Similarity=0.195  Sum_probs=84.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCc--ccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS--VTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||++..+......  .......++..|+|||.+.+. .++.++|+||+|++++++++|..||.....
T Consensus       150 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~  229 (310)
T cd07865         150 ILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE  229 (310)
T ss_pred             EEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence            57888999999999999876432211  112234567889999987654 467889999999999999999999865322


Q ss_pred             cc-ccHHHHHHhhcCCcc-cch-----hhhhccccc-----hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GE-MSLRDWVNKSLSGEL-TQV-----IDANLARDE-----QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~-~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .. ......+....+... ...     .+....+..     .....+......+.+++.+||..||.+|||+.++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         230 QHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             HHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            11 011111111111000 000     000000000     000001112345678999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.77  E-value=3.4e-20  Score=127.09  Aligned_cols=117  Identities=26%  Similarity=0.266  Sum_probs=82.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......|++.|+|||.+.+..++.++|+||+|++++++++|..||......  
T Consensus       129 il~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--  204 (318)
T cd05582         129 ILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK--  204 (318)
T ss_pred             eEECCCCcEEEeeccCCcccCCCCC--ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH--
Confidence            6788999999999999876533211  122356899999999998888889999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTD  139 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~  139 (159)
                         ..........        .       ..+......+.+++.+||+.||.+||++.+
T Consensus       205 ---~~~~~i~~~~--------~-------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         205 ---ETMTMILKAK--------L-------GMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             ---HHHHHHHcCC--------C-------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence               1111100000        0       001123456788999999999999999443

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.77  E-value=1.2e-18  Score=116.62  Aligned_cols=123  Identities=24%  Similarity=0.324  Sum_probs=81.9

Q ss_pred             CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++. ++.+||+|||++........  ......+++.|++||++...  .++.++|+||+|++++++++|..||.....
T Consensus       139 il~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~  216 (268)
T cd06624         139 VLVNTYSGVVKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE  216 (268)
T ss_pred             EEEcCCCCeEEEecchhheecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC
Confidence            46654 67899999999876532221  12223478899999987654  377899999999999999999999864321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....  +...             ......  ..+......+.+++.+||+.+|++|||+.+++.
T Consensus       217 ~~~~~--~~~~-------------~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         217 PQAAM--FKVG-------------MFKIHP--EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             hhhhH--hhhh-------------hhccCC--CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            11100  0000             000000  011234556889999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.77  E-value=8.5e-20  Score=138.06  Aligned_cols=125  Identities=22%  Similarity=0.250  Sum_probs=88.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCccc--ccccccccccccccccCCC---ccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVT--QTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~~gt~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      |+++.+|.+|++|||.|..+.++.....  .....||+-|||||++.+.   +...+.||||+||++.||++|+.||...
T Consensus      1365 I~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~ 1444 (1509)
T KOG4645|consen 1365 ILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAEL 1444 (1509)
T ss_pred             eeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhc
Confidence            6889999999999999998765432211  2345799999999987654   4668899999999999999999999764


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      ..+ ....-.....-              .|+   .|........+++.+|+..||.+|.++.|++..
T Consensus      1445 dne-~aIMy~V~~gh--------------~Pq---~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1445 DNE-WAIMYHVAAGH--------------KPQ---IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             cch-hHHHhHHhccC--------------CCC---CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            321 11111111111              010   122355678889999999999999999887753

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.77  E-value=1.1e-18  Score=117.60  Aligned_cols=121  Identities=18%  Similarity=0.241  Sum_probs=84.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.++|+|||++.......    .....|+..|+|||...+ ..++.++|+||+|++++++++|..||.......
T Consensus       128 il~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~  203 (279)
T cd05633         128 ILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD  203 (279)
T ss_pred             EEECCCCCEEEccCCcceeccccC----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC
Confidence            578889999999999987653221    122458899999998753 457889999999999999999999986532221


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                      ...   .......         ...     ..+...+..+.+++.+||+.||++|+     |+.++++
T Consensus       204 ~~~---~~~~~~~---------~~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         204 KHE---IDRMTLT---------VNV-----ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             HHH---HHHHhhc---------CCc-----CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence            111   1110000         000     01123456788999999999999999     5888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.77  E-value=1.2e-18  Score=117.65  Aligned_cols=139  Identities=22%  Similarity=0.190  Sum_probs=84.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc-cccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI-VSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........  ......++..|+|||.+.+.. ++.++|+||+|++++++++|..||......+
T Consensus       131 ill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~  208 (284)
T cd07860         131 LLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID  208 (284)
T ss_pred             EEECCCCCEEEeeccchhhcccCcc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence            5788999999999999876532221  122234678899999876544 5788999999999999999999986432111


Q ss_pred             ccHHHHHHhhcCCc------ccchhh--hhc-cccch-hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGE------LTQVID--ANL-ARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~------~~~~~~--~~~-~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .............      ...+..  ... ..... ...........+.+++.+||+.||++|||+.++++
T Consensus       209 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         209 -QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             -HHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence             1111111000000      000000  000 00000 00001123456788999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.77  E-value=2.3e-18  Score=114.88  Aligned_cols=124  Identities=22%  Similarity=0.281  Sum_probs=88.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++.........  .....++..|++||...+..++.++|+|+||++++++++|..||.....  .
T Consensus       131 i~~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~  206 (264)
T cd06623         131 LLINSKGEVKIADFGISKVLENTLDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--P  206 (264)
T ss_pred             EEECCCCCEEEccCccceecccCCCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--c
Confidence            57888999999999999876432221  1234577889999998888888999999999999999999999865432  0


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchH-HHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMD-CLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...+...........        .      .+.. .+..+.+++..||..+|++||++.+++.
T Consensus       207 ~~~~~~~~~~~~~~~--------~------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         207 SFFELMQAICDGPPP--------S------LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             CHHHHHHHHhcCCCC--------C------CCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            111111111100000        0      0112 4568999999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.77  E-value=7e-19  Score=124.90  Aligned_cols=116  Identities=22%  Similarity=0.210  Sum_probs=87.1

Q ss_pred             Ccc-CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILL-DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||+ +..++++|+|||.++.....     ..+.+-|..|.|||++....|+.++|+||+|+++|+|++|+.||+....+ 
T Consensus       446 IL~~~~~g~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-  519 (612)
T KOG0603|consen  446 ILLDGSAGHLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-  519 (612)
T ss_pred             eeecCCCCcEEEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-
Confidence            678 68899999999999876432     22244577899999999889999999999999999999999999865433 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                         .+...+...+...                 ........+|+.+||+.||.+|+++.++..
T Consensus       520 ---~ei~~~i~~~~~s-----------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  520 ---IEIHTRIQMPKFS-----------------ECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             ---HHHHHhhcCCccc-----------------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence               1111111111111                 134556788999999999999999999874

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.77  E-value=1.7e-19  Score=122.20  Aligned_cols=67  Identities=30%  Similarity=0.442  Sum_probs=58.2

Q ss_pred             CceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            7 MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         7 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      -.+||+|||+|+.+.++.   ...+.+||+.|||||++...+|+.++|+||.|+++|++++|+.||....
T Consensus       152 ~~LKIADFGfAR~L~~~~---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t  218 (429)
T KOG0595|consen  152 PVLKIADFGFARFLQPGS---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET  218 (429)
T ss_pred             ceEEecccchhhhCCchh---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence            568999999999985333   3345789999999999999999999999999999999999999997543

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.77  E-value=2e-18  Score=114.73  Aligned_cols=120  Identities=27%  Similarity=0.398  Sum_probs=83.6

Q ss_pred             CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++. ++.+||+|||++........   .....++..|++||.+.+..++.++|+||+|++++++++|..||...... 
T Consensus       132 il~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-  207 (256)
T cd08220         132 ILLDKHKMVVKIGDFGISKILSSKSK---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-  207 (256)
T ss_pred             EEEcCCCCEEEEccCCCceecCCCcc---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-
Confidence            45653 45689999999987643322   12245788999999998878888999999999999999999998643211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                          .............              .+...+..+.+++.+||+.+|++|||+.+++.
T Consensus       208 ----~~~~~~~~~~~~~--------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         208 ----ALVLKIMSGTFAP--------------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             ----HHHHHHHhcCCCC--------------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence                1111100000000              01124557889999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.77  E-value=4.2e-19  Score=121.99  Aligned_cols=115  Identities=21%  Similarity=0.252  Sum_probs=81.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++.......  ......||+.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       132 ill~~~~~ikL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--  207 (323)
T cd05615         132 VMLDSEGHIKIADFGMCKEHMVDGV--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--  207 (323)
T ss_pred             eEECCCCCEEEeccccccccCCCCc--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--
Confidence            6789999999999999875432211  122345899999999988888899999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                      .....+..   ..        ..       .+......+.+++.+||+.+|++|++.
T Consensus       208 ~~~~~i~~---~~--------~~-------~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         208 ELFQSIME---HN--------VS-------YPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHHHHHHh---CC--------CC-------CCccCCHHHHHHHHHHcccCHhhCCCC
Confidence            11111100   00        00       011234567889999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=5e-19  Score=117.78  Aligned_cols=114  Identities=19%  Similarity=0.199  Sum_probs=81.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      +|+|++|++||+|||+|+.--.  ......+.||||.|+|||++-...|..++|.|++|+++|||++|+.||.....+..
T Consensus       299 LlLDkDGHIKitDFGLCKE~I~--~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL  376 (516)
T KOG0690|consen  299 LLLDKDGHIKITDFGLCKEEIK--YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL  376 (516)
T ss_pred             heeccCCceEeeecccchhccc--ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH
Confidence            4789999999999999976321  12234458999999999999999999999999999999999999999975432211


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY  136 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  136 (159)
                        .+.+-.           .. .+.+      ....+....|+...+..||.+|.-
T Consensus       377 --FeLIl~-----------ed-~kFP------r~ls~eAktLLsGLL~kdP~kRLG  412 (516)
T KOG0690|consen  377 --FELILM-----------ED-LKFP------RTLSPEAKTLLSGLLKKDPKKRLG  412 (516)
T ss_pred             --HHHHHh-----------hh-ccCC------ccCCHHHHHHHHHHhhcChHhhcC
Confidence              111100           00 0111      123345667788888899999853

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.77  E-value=6.7e-19  Score=120.03  Aligned_cols=127  Identities=17%  Similarity=0.114  Sum_probs=82.2

Q ss_pred             CccCCCCceEEcccccceecCCCCC-------------cccccccccccccccccccCCCccccchhhHhHHHHHHHHHh
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD-------------SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT   67 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~   67 (159)
                      |+++.++.+||+|||+++.......             ........++..|+|||.+....++.++|+||||++++++++
T Consensus       132 Ill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~  211 (305)
T cd05609         132 LLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLV  211 (305)
T ss_pred             EEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHh
Confidence            5788899999999999864211000             001112346778999999888788899999999999999999


Q ss_pred             cCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           68 RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        68 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                      |..||......     +...........   .+      .   .....+..+.+++.+||+.||++||++.++++.|
T Consensus       212 g~~pf~~~~~~-----~~~~~~~~~~~~---~~------~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll  271 (305)
T cd05609         212 GCVPFFGDTPE-----ELFGQVISDDIE---WP------E---GDEALPADAQDLISRLLRQNPLERLGTGGAFEVK  271 (305)
T ss_pred             CCCCCCCCCHH-----HHHHHHHhcccC---CC------C---ccccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence            99998642211     111111100000   00      0   0012345688999999999999999965444433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.77  E-value=2.5e-18  Score=116.17  Aligned_cols=122  Identities=18%  Similarity=0.267  Sum_probs=83.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC------ccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG------IVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~------~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      |+++.++.+||+|||++..+....    .....+++.|++||.+.+.      .++.++|+||+|++++++++|..||..
T Consensus       134 il~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  209 (286)
T cd06622         134 VLVNGNGQVKLCDFGVSGNLVASL----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPP  209 (286)
T ss_pred             EEECCCCCEEEeecCCcccccCCc----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence            577888999999999987653221    2224578889999987543      247789999999999999999999864


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....  ..........            ..+.  ..+......+.+++.+||+.+|++||++.+++.
T Consensus       210 ~~~~~--~~~~~~~~~~------------~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         210 ETYAN--IFAQLSAIVD------------GDPP--TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             cchhh--HHHHHHHHhh------------cCCC--CCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            32111  1010100000            0000  011235567889999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.77  E-value=1e-18  Score=120.73  Aligned_cols=141  Identities=19%  Similarity=0.188  Sum_probs=87.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCc---ccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS---VTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      |+++.++.+||+|||++.........   .......|+..|++||++.+ ..++.++|+||||++++++++|+.||....
T Consensus       138 ill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~  217 (337)
T cd07852         138 ILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTS  217 (337)
T ss_pred             EEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCC
Confidence            57889999999999999765432221   12233468889999998754 356788999999999999999999986432


Q ss_pred             cccccHHHHHHhhcCC------------cccchhhhhccccch-hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSG------------ELTQVIDANLARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      ..+.  ...+......            ....+++........ ........+..+.+++.+||+.||++|||+.++++.
T Consensus       218 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         218 TLNQ--LEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             hHHH--HHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            2111  0000000000            000011100000000 000011245678999999999999999999999953

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.77  E-value=6.1e-19  Score=120.40  Aligned_cols=117  Identities=24%  Similarity=0.254  Sum_probs=89.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||+|.++.+||+|||++-.+....   ...++||+|-|.+||++.+.+| .+.+|.||+|+++|.++.|..||.+...  
T Consensus       184 ILLD~N~NiKIADFGLSNly~~~k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh--  258 (668)
T KOG0611|consen  184 ILLDQNNNIKIADFGLSNLYADKK---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH--  258 (668)
T ss_pred             eeecCCCCeeeeccchhhhhcccc---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--
Confidence            799999999999999998775333   3556899999999999999987 4679999999999999999999976321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                                     +.++.+.-.+.....    ..+....-|+++||..||++|-|++++-
T Consensus       259 ---------------k~lvrQIs~GaYrEP----~~PSdA~gLIRwmLmVNP~RRATieDiA  301 (668)
T KOG0611|consen  259 ---------------KRLVRQISRGAYREP----ETPSDASGLIRWMLMVNPERRATIEDIA  301 (668)
T ss_pred             ---------------HHHHHHhhcccccCC----CCCchHHHHHHHHHhcCcccchhHHHHh
Confidence                           222222222222111    2234566789999999999999999875

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.77  E-value=1.1e-18  Score=118.42  Aligned_cols=123  Identities=20%  Similarity=0.233  Sum_probs=85.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++........  ......++..|++||...+..++.++|+||+|++++++++|..||.....  .
T Consensus       147 ilv~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~  222 (292)
T cd06657         147 ILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--L  222 (292)
T ss_pred             EEECCCCCEEEcccccceecccccc--cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--H
Confidence            5788899999999999876543221  12234578889999988777788899999999999999999999864211  1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..........+....               .....+..+.+++.+||+.+|.+||++.+++.
T Consensus       223 ~~~~~~~~~~~~~~~---------------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         223 KAMKMIRDNLPPKLK---------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHHHHHHhhCCcccC---------------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            111111111111100               01123456788999999999999999999886

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.77  E-value=4.1e-19  Score=124.09  Aligned_cols=125  Identities=19%  Similarity=0.245  Sum_probs=85.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC----ccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG----IVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~----~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      ||++.++.+||+|||++........ .......||+.|+|||++.+.    .++.++|+||+|++++++++|..||....
T Consensus       173 ILl~~~~~~kL~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~  251 (370)
T cd05596         173 MLLDKSGHLKLADFGTCMKMDANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS  251 (370)
T ss_pred             EEEcCCCCEEEEeccceeeccCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC
Confidence            6889999999999999987643221 122345689999999987653    36789999999999999999999986532


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC--CCcHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ--RIYMTDAAA  142 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~~ll~  142 (159)
                      ..     ..+....... ..     +.     .+.....+..+.+++.+|+..+|.+  |+++.++++
T Consensus       252 ~~-----~~~~~i~~~~-~~-----~~-----~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         252 LV-----GTYSKIMDHK-NS-----LT-----FPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             HH-----HHHHHHHcCC-Cc-----CC-----CCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence            11     1111110000 00     00     0001124567888999999999987  999999974

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.76  E-value=5.6e-19  Score=121.58  Aligned_cols=118  Identities=23%  Similarity=0.310  Sum_probs=83.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||+|+.|+++|+|+|+|..+..+..   ....+||.+|||||++.++.|+.+.|.|++||++|+|+.|..||..-..-..
T Consensus       318 ILLDd~GhvRISDLGLAvei~~g~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk  394 (591)
T KOG0986|consen  318 ILLDDHGHVRISDLGLAVEIPEGKP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK  394 (591)
T ss_pred             eeeccCCCeEeeccceEEecCCCCc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh
Confidence            7999999999999999998864432   3334799999999999999999999999999999999999999864321110


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                                    ++=++.+....+..  .+..-.+....+....|..||.+|.-+
T Consensus       395 --------------~eEvdrr~~~~~~e--y~~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  395 --------------REEVDRRTLEDPEE--YSDKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             --------------HHHHHHHHhcchhh--cccccCHHHHHHHHHHHccCHHHhccC
Confidence                          00111111111110  112334566777888888899888654

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.76  E-value=1.9e-18  Score=119.18  Aligned_cols=140  Identities=19%  Similarity=0.201  Sum_probs=87.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCc--ccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS--VTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||++.........  .......++..|++||.+.+ ..++.++|+||+|++++++++|..||.....
T Consensus       138 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~  217 (334)
T cd07855         138 LLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY  217 (334)
T ss_pred             EEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh
Confidence            57889999999999999775432211  11123467889999998755 3578899999999999999999999865322


Q ss_pred             ccccHHHHHHhhcCCcccch--------hhhhccccchh-----hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQV--------IDANLARDEQS-----FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..  ....+..........+        +.......+..     .......+..+.+++.+||+.+|.+|||+++++.
T Consensus       218 ~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         218 VH--QLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             HH--HHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            11  0011110000000000        00000000000     0011234677999999999999999999999885

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.76  E-value=1.2e-18  Score=120.45  Aligned_cols=146  Identities=20%  Similarity=0.195  Sum_probs=90.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........  ......++..|+|||.+.. ..++.++|+||+|++++++++|..||...... 
T Consensus       139 il~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-  215 (337)
T cd07858         139 LLLNANCDLKICDFGLARTTSEKGD--FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-  215 (337)
T ss_pred             EEEcCCCCEEECcCccccccCCCcc--cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-
Confidence            5778899999999999976543221  1223457888999998754 45788999999999999999999998643211 


Q ss_pred             ccHHHHHHhhcC------------Ccccchhhhhcc-ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH--H
Q 035782           80 MSLRDWVNKSLS------------GELTQVIDANLA-RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK--L  144 (159)
Q Consensus        80 ~~~~~~~~~~~~------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~--l  144 (159)
                       .....+.....            ......+..... ...............+.+++.+||+.+|++|||+.++++.  +
T Consensus       216 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~  294 (337)
T cd07858         216 -HQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYL  294 (337)
T ss_pred             -HHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcch
Confidence             00111110000            000000000000 0000011112356678999999999999999999999854  6


Q ss_pred             HHHHHH
Q 035782          145 KKIKEK  150 (159)
Q Consensus       145 ~~~~~~  150 (159)
                      ..+...
T Consensus       295 ~~~~~~  300 (337)
T cd07858         295 ASLHDP  300 (337)
T ss_pred             hhhcCc
Confidence            554433

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.76  E-value=2.1e-18  Score=115.11  Aligned_cols=126  Identities=22%  Similarity=0.303  Sum_probs=84.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCccc--ccccccccccccccccCCCc---cccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVT--QTMTMATIGYMAPEYGSEGI---VSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~~gt~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      |+++.++.+||+|||++...........  .....++..|++||++.+..   .+.++|+|+||++++++++|..||...
T Consensus       130 il~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~  209 (264)
T cd06626         130 IFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL  209 (264)
T ss_pred             EEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence            5788899999999999877643222111  11245678899999987655   788999999999999999999998653


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ... .........   ..            ....+........+.+++.+||+.+|.+|||+.+++.
T Consensus       210 ~~~-~~~~~~~~~---~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         210 DNE-FQIMFHVGA---GH------------KPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             cch-HHHHHHHhc---CC------------CCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            211 111000000   00            0000001123556788999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.76  E-value=1.1e-18  Score=124.04  Aligned_cols=64  Identities=27%  Similarity=0.177  Sum_probs=54.9

Q ss_pred             CceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            7 MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         7 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ..+||+|||.++.......     ..+.+..|+|||++.+.+|+.+.|+|||||++.||++|.+.|.+.
T Consensus       328 ~~vKVIDFGSSc~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~  391 (586)
T KOG0667|consen  328 SRIKVIDFGSSCFESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD  391 (586)
T ss_pred             CceeEEecccccccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence            4789999999988643222     356788999999999999999999999999999999998888753

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.76  E-value=2e-18  Score=115.73  Aligned_cols=120  Identities=19%  Similarity=0.247  Sum_probs=85.2

Q ss_pred             CccCCCC-ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDM-VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++ .++|+|||++.......      ...++..|+|||++.+..++.++|+||+|++++++++|..||.......
T Consensus       140 il~~~~~~~~~l~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~  213 (267)
T PHA03390        140 VLYDRAKDRIYLCDYGLCKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE  213 (267)
T ss_pred             EEEeCCCCeEEEecCccceecCCCc------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch
Confidence            4667777 99999999987654221      2347889999999988888899999999999999999999997543322


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-HHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-MTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-~~~ll~  142 (159)
                      .....+.... ...        .       ..+......+.+++.+||+.+|.+||+ ++++++
T Consensus       214 ~~~~~~~~~~-~~~--------~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        214 LDLESLLKRQ-QKK--------L-------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             hhHHHHHHhh-ccc--------C-------CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            2222221111 000        0       011135567899999999999999996 588873

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.76  E-value=2.5e-18  Score=117.40  Aligned_cols=138  Identities=20%  Similarity=0.179  Sum_probs=85.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........  ..+...++..|+|||.+.+ ..++.++|+||+|++++++++|..||.....  
T Consensus       139 il~~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~--  214 (309)
T cd07845         139 LLLTDKGCLKIADFGLARTYGLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE--  214 (309)
T ss_pred             EEECCCCCEEECccceeeecCCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH--
Confidence            5788899999999999987643221  1222345778999998765 3578899999999999999999999864321  


Q ss_pred             ccHHHHHHhhcCCc----ccchhh------hhccccc--hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGE----LTQVID------ANLARDE--QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~----~~~~~~------~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ......+.......    +..+..      ..+....  ..........+.+.+++.+||+.||.+|||+.+++.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         215 IEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             HHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            11111111111100    000000      0000000  000001113556788999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.76  E-value=2.1e-18  Score=114.78  Aligned_cols=118  Identities=19%  Similarity=0.265  Sum_probs=80.8

Q ss_pred             CccCCCC-------ceEEcccccceecCCCCCcccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHh-cCC
Q 035782            1 ILLDEDM-------VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFT-RKK   70 (159)
Q Consensus         1 ili~~~~-------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~-~~~   70 (159)
                      |+++.++       .+||+|||++.....      .....++..|++||++.+.  .++.++|+||+|++++++++ +..
T Consensus       132 ill~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~  205 (259)
T cd05037         132 ILVARYGLNEGYVPFIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEE  205 (259)
T ss_pred             EEEecCccccCCceeEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCC
Confidence            4566666       799999999876532      1123456789999998776  67889999999999999998 466


Q ss_pred             CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           71 PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        71 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                      ||......  ....+..   ..        ...+.        .....+.+++.+||..+|++|||+.++++.|+
T Consensus       206 p~~~~~~~--~~~~~~~---~~--------~~~~~--------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         206 PLSTLSSS--EKERFYQ---DQ--------HRLPM--------PDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             CcccCCch--hHHHHHh---cC--------CCCCC--------CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            66543211  1111110   00        00000        01157889999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.76  E-value=9.9e-19  Score=118.14  Aligned_cols=123  Identities=19%  Similarity=0.243  Sum_probs=85.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++........  ......++..|++||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       147 i~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-  223 (286)
T cd06614         147 ILLSKDGSVKLADFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-  223 (286)
T ss_pred             EEEcCCCCEEECccchhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence            5788899999999999865532211  1223457788999999887788899999999999999999999986422110 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .... ..   ...        .    .....+...+..+.+++..||+.+|.+||++.+++.
T Consensus       224 ~~~~-~~---~~~--------~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         224 ALFL-IT---TKG--------I----PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHHH-HH---hcC--------C----CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            0000 00   000        0    000011124567889999999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.76  E-value=3.1e-18  Score=117.16  Aligned_cols=141  Identities=18%  Similarity=0.180  Sum_probs=85.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-----ccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-----VTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTD   73 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~   73 (159)
                      |+++.++.+|++|||.+.........     .......++..|+|||++...  .++.++|+||+|++++++++|..||.
T Consensus       132 ili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~  211 (314)
T cd08216         132 ILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFK  211 (314)
T ss_pred             EEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence            57888899999999998765322211     111223467789999987653  57889999999999999999999997


Q ss_pred             ccccccccHHHHHHhhcCCcc------------cchhhhhc---cccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782           74 EMFIGEMSLRDWVNKSLSGEL------------TQVIDANL---ARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT  138 (159)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  138 (159)
                      ........ .+.........+            ........   ................+.+++..||..||++|||+.
T Consensus       212 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~  290 (314)
T cd08216         212 DMPATQML-LEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSAS  290 (314)
T ss_pred             CCCHHHHH-HHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHH
Confidence            53221111 111110000000            00000000   000011111223345788899999999999999999


Q ss_pred             HHHH
Q 035782          139 DAAA  142 (159)
Q Consensus       139 ~ll~  142 (159)
                      +++.
T Consensus       291 ~ll~  294 (314)
T cd08216         291 QLLN  294 (314)
T ss_pred             HHhc
Confidence            9984

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.76  E-value=8.8e-20  Score=118.02  Aligned_cols=123  Identities=24%  Similarity=0.309  Sum_probs=88.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++..|.+||||||.+..+.   .+...+.-.|-..|+|||.+...  +|..++||||+|++++|+.+|..|+..... 
T Consensus       199 ILldr~G~vKLCDFGIcGqLv---~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-  274 (361)
T KOG1006|consen  199 ILLDRHGDVKLCDFGICGQLV---DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-  274 (361)
T ss_pred             eEEecCCCEeeecccchHhHH---HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-
Confidence            789999999999999987653   23334445678899999976543  588999999999999999999999765321 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhch---HHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKM---DCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                         ..+.+.+.+.++...            ...+.   +....+...+..|+-.|-+.||...++++
T Consensus       275 ---vfeql~~Vv~gdpp~------------l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  275 ---VFEQLCQVVIGDPPI------------LLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             ---HHHHHHHHHcCCCCe------------ecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence               222222222222221            11112   24456888999999999999999998874

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.76  E-value=4.1e-18  Score=117.31  Aligned_cols=148  Identities=18%  Similarity=0.193  Sum_probs=93.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      |+++.++.++|+|||.+......... .......++..|++||.+.+. .++.++|+||+|++++++++|..||......
T Consensus       134 ili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~  213 (330)
T cd07834         134 ILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI  213 (330)
T ss_pred             EEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH
Confidence            57888999999999999876543210 112334578889999998877 7888999999999999999999998754321


Q ss_pred             cccHHHHHHhhcC------------Ccccchhhhhccccc-hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH--H
Q 035782           79 EMSLRDWVNKSLS------------GELTQVIDANLARDE-QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA--K  143 (159)
Q Consensus        79 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~--~  143 (159)
                      .  ....+.....            ......+........ .........+..+.+++.+||+.+|.+|||+.+++.  .
T Consensus       214 ~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~  291 (330)
T cd07834         214 D--QLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPY  291 (330)
T ss_pred             H--HHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCcc
Confidence            1  1111111000            000001100000000 000111224567899999999999999999999996  4


Q ss_pred             HHHHHHH
Q 035782          144 LKKIKEK  150 (159)
Q Consensus       144 l~~~~~~  150 (159)
                      ++++...
T Consensus       292 ~~~~~~~  298 (330)
T cd07834         292 LAQLHDP  298 (330)
T ss_pred             HHhhccc
Confidence            6655543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.76  E-value=6.9e-19  Score=120.35  Aligned_cols=142  Identities=17%  Similarity=0.109  Sum_probs=86.2

Q ss_pred             CccCC----CCceEEcccccceecCCCCC-cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDE----DMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~----~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      |+++.    ++.+||+|||++........ ........++..|+|||+..+. .++.++|+||+|++++++++|..||..
T Consensus       139 il~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~  218 (316)
T cd07842         139 ILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKG  218 (316)
T ss_pred             EEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcC
Confidence            46777    89999999999987643222 1122334578889999987654 578899999999999999999999875


Q ss_pred             cccccc--------cHHHHHHhhcC------------Ccccchhhhhc-cccc----hh-hhhchHHHHHHHHHHhhhcC
Q 035782           75 MFIGEM--------SLRDWVNKSLS------------GELTQVIDANL-ARDE----QS-FFVKMDCLSSIMHLALDCCM  128 (159)
Q Consensus        75 ~~~~~~--------~~~~~~~~~~~------------~~~~~~~~~~~-~~~~----~~-~~~~~~~~~~~~~l~~~cl~  128 (159)
                      ......        ...........            .......+... ....    .. ..........+.+++.+||+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  298 (316)
T cd07842         219 REAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLE  298 (316)
T ss_pred             CcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhc
Confidence            432220        00000000000            00000000000 0000    00 00001234568899999999


Q ss_pred             CCCCCCCcHHHHHH
Q 035782          129 ESPDQRIYMTDAAA  142 (159)
Q Consensus       129 ~~p~~Rpt~~~ll~  142 (159)
                      .||.+|||+.+++.
T Consensus       299 ~~P~~Rps~~eil~  312 (316)
T cd07842         299 YDPTKRITAEEALE  312 (316)
T ss_pred             CCcccCcCHHHHhc
Confidence            99999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.76  E-value=1.8e-18  Score=115.64  Aligned_cols=109  Identities=20%  Similarity=0.305  Sum_probs=74.5

Q ss_pred             eEEcccccceecCCCCCcccccccccccccccccccC-CCccccchhhHhHHHHHHHHH-hcCCCCcccccccccHHHHH
Q 035782            9 AHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETF-TRKKPTDEMFIGEMSLRDWV   86 (159)
Q Consensus         9 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-~~~~~~~~dv~s~g~~~~~~~-~~~~p~~~~~~~~~~~~~~~   86 (159)
                      +|++|||++......      ....++..|+|||.+. +..++.++|+||||+++|+++ .|..||........   ...
T Consensus       151 ~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~---~~~  221 (262)
T cd05077         151 IKLSDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK---ERF  221 (262)
T ss_pred             eEeCCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH---HHH
Confidence            899999998654321      1234778899999876 456788999999999999997 47777654221110   000


Q ss_pred             HhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           87 NKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                      ..   ... ..              .......+.+++.+||+.||.+||++.+|++.+
T Consensus       222 ~~---~~~-~~--------------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         222 YE---GQC-ML--------------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             Hh---cCc-cC--------------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            00   000 00              001234678899999999999999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.76  E-value=2.4e-18  Score=116.08  Aligned_cols=139  Identities=19%  Similarity=0.149  Sum_probs=85.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.++|+|||++........  ......++..|+|||++.+. .++.++|+||+|++++++++|..||.......
T Consensus       130 il~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~  207 (283)
T cd07835         130 LLIDREGALKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID  207 (283)
T ss_pred             EEEcCCCcEEEeecccccccCCCcc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            5778899999999999976532221  12223467889999987654 46788999999999999999999986532211


Q ss_pred             ccHHHHHHhhcCC---cc------cchhhhhccc-cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSG---EL------TQVIDANLAR-DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~---~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ............   .+      .......... ..............+.+++.+||+.||++|||+.+++.
T Consensus       208 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         208 -QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             -HHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence             111111100000   00      0000000000 00000111233467889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.76  E-value=3e-18  Score=113.79  Aligned_cols=125  Identities=23%  Similarity=0.231  Sum_probs=87.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||.+................++..|.+||...+...+.++|+|++|++++++++|..||.....   
T Consensus       132 i~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---  208 (260)
T cd06606         132 ILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN---  208 (260)
T ss_pred             EEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---
Confidence            57788899999999999876543321112334578889999998887788999999999999999999999865431   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .........        ..     ......+...+..+.+++.+|+..+|++||++.++++
T Consensus       209 -~~~~~~~~~--------~~-----~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         209 -PMAALYKIG--------SS-----GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             -hHHHHHhcc--------cc-----CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence             000000000        00     0000011233567899999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.76  E-value=2.9e-18  Score=114.66  Aligned_cols=123  Identities=21%  Similarity=0.117  Sum_probs=83.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++........ .......++..|+|||.+.+..++.++|+||||++++++++|..||...... 
T Consensus       137 il~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-  215 (265)
T cd06652         137 ILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-  215 (265)
T ss_pred             EEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-
Confidence            57888999999999998765321111 1122245788999999988778889999999999999999999998643111 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                          ..+........             ....+......+.+++.+||. +|.+||+++++++
T Consensus       216 ----~~~~~~~~~~~-------------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         216 ----AAIFKIATQPT-------------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             ----HHHHHHhcCCC-------------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence                00111000000             000122344567788889985 9999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.76  E-value=1.5e-18  Score=115.42  Aligned_cols=121  Identities=21%  Similarity=0.230  Sum_probs=84.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc-cccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI-VSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++.......   ......++..|++||...... ++.++|+||+|++++++++|..||.......
T Consensus       133 i~~~~~~~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~  209 (258)
T cd06632         133 ILVDTNGVVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA  209 (258)
T ss_pred             EEECCCCCEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH
Confidence            567889999999999987754322   122345788899999876665 7889999999999999999999986532100


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                          ............              ..+......+.+++.+||..+|++||++.+++.
T Consensus       210 ----~~~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         210 ----AVFKIGRSKELP--------------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             ----HHHHHHhcccCC--------------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence                000000000000              001133466788999999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.76  E-value=4.1e-18  Score=118.41  Aligned_cols=118  Identities=20%  Similarity=0.191  Sum_probs=88.0

Q ss_pred             CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHH
Q 035782            6 DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDW   85 (159)
Q Consensus         6 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~   85 (159)
                      ++.+|++|||++.....   .......+||+.|+|||++....|+..+|+||+|++.|.|++|..||..........  .
T Consensus       175 ~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~--~  249 (382)
T KOG0032|consen  175 SGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL--A  249 (382)
T ss_pred             CCcEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--H
Confidence            35899999999998754   223455789999999999998899999999999999999999999997643211111  1


Q ss_pred             HHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           86 VNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      +..   ..+      ....     +..........+++..++..||.+|+|+.++++
T Consensus       250 i~~---~~~------~f~~-----~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  250 ILR---GDF------DFTS-----EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             HHc---CCC------CCCC-----CCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence            110   000      0001     112255678889999999999999999999997

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.76  E-value=5.2e-18  Score=114.47  Aligned_cols=139  Identities=18%  Similarity=0.190  Sum_probs=86.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.++|+|||++........ .......++..|+|||.+.+. .++.++|+||+|++++++++|..+|...... 
T Consensus       130 i~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-  207 (286)
T cd07832         130 LLISADGVLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-  207 (286)
T ss_pred             EEEcCCCcEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-
Confidence            5778889999999999987643321 112334688899999987654 4688999999999999999998777543211 


Q ss_pred             ccHHHHHHhhcCC----cccc---hhhhhc---cccch--hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSG----ELTQ---VIDANL---ARDEQ--SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~----~~~~---~~~~~~---~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ............    .+..   +.+...   .....  ...........+.+++.+||..+|.+|||+++++.
T Consensus       208 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         208 -EQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             -HHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence             111111111000    0000   000000   00000  00011234578899999999999999999999875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.76  E-value=3.3e-18  Score=115.26  Aligned_cols=121  Identities=20%  Similarity=0.274  Sum_probs=84.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++..+....    .....|+..|++||++.+. .++.++|+||+|++++++++|..||.......
T Consensus       128 ili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~  203 (278)
T cd05606         128 ILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD  203 (278)
T ss_pred             EEECCCCCEEEccCcCccccCccC----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc
Confidence            578889999999999987653222    1224688999999998644 57888999999999999999999986532111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                      ...........        ..         ..+...+..+.+++.+|+..+|++||     ++.++++
T Consensus       204 ~~~~~~~~~~~--------~~---------~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         204 KHEIDRMTLTM--------AV---------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             hHHHHHHhhcc--------CC---------CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            11000000000        00         01112356788999999999999999     9999884

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.76  E-value=1.8e-18  Score=116.66  Aligned_cols=140  Identities=21%  Similarity=0.222  Sum_probs=86.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........ ...+...++..|++||.+.+. .++.++|+||||++++++++|..||.......
T Consensus       131 il~~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~  209 (287)
T cd07840         131 ILINNDGVLKLADFGLARPYTKRNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE  209 (287)
T ss_pred             eEEcCCCCEEEccccceeeccCCCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            5788999999999999987643321 112334567889999976543 57889999999999999999999986533211


Q ss_pred             ccHHHHHHhh---cCCcccchhh----hhcccc---chhh-hhchH-HHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKS---LSGELTQVID----ANLARD---EQSF-FVKMD-CLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~---~~~~~~~~~~----~~~~~~---~~~~-~~~~~-~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .........   ....+...-+    ......   .... ..... ++..+.+++.+||..+|.+||++++++.
T Consensus       210 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         210 -QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             -HHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence             111111100   0000000000    000000   0000 00011 2567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.76  E-value=5.5e-18  Score=109.25  Aligned_cols=139  Identities=15%  Similarity=0.203  Sum_probs=89.2

Q ss_pred             CccCCCCceEEcccccceecCCCCC--cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD--SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      +||+++|.+||+|||+++.+.....  -...+..+-|.+|++||.+.+. .|+++.|+|+.||++.+|+++.+.+++...
T Consensus       155 vLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte  234 (376)
T KOG0669|consen  155 VLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE  234 (376)
T ss_pred             EEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH
Confidence            5899999999999999987753322  2233445568999999988776 689999999999999999999988775321


Q ss_pred             ccccHHHHHHhh---c-CCcccchhh----hhc--c----ccch---hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHH
Q 035782           78 GEMSLRDWVNKS---L-SGELTQVID----ANL--A----RDEQ---SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDA  140 (159)
Q Consensus        78 ~~~~~~~~~~~~---~-~~~~~~~~~----~~~--~----~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~l  140 (159)
                        ......+...   + +.-|.....    +.+  .    +...   .+..+........+++..++..||.+|+++.++
T Consensus       235 --qqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~a  312 (376)
T KOG0669|consen  235 --QQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQA  312 (376)
T ss_pred             --HHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhh
Confidence              1111111111   1 111111110    001  0    0000   001111223467789999999999999999998


Q ss_pred             H
Q 035782          141 A  141 (159)
Q Consensus       141 l  141 (159)
                      +
T Consensus       313 l  313 (376)
T KOG0669|consen  313 L  313 (376)
T ss_pred             h
Confidence            8

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.75  E-value=4e-18  Score=118.02  Aligned_cols=142  Identities=17%  Similarity=0.136  Sum_probs=87.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++.....     .....++..|+|||++.+ ..++.++|+||+|++++++++|+.||.......
T Consensus       148 Ill~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~  222 (342)
T cd07879         148 LAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD  222 (342)
T ss_pred             EEECCCCCEEEeeCCCCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            57888999999999998754221     122457888999998765 357889999999999999999999997532111


Q ss_pred             ccHHHHHHhhcCCc------------ccchhhhhc-cccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH--HHH
Q 035782           80 MSLRDWVNKSLSGE------------LTQVIDANL-ARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA--AKL  144 (159)
Q Consensus        80 ~~~~~~~~~~~~~~------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll--~~l  144 (159)
                       ....... .....            ....+.... ................+.+++.+||+.||.+||++.+++  ..+
T Consensus       223 -~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f  300 (342)
T cd07879         223 -QLTQILK-VTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYF  300 (342)
T ss_pred             -HHHHHHH-hcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcch
Confidence             0111000 00000            000000000 000000000112345678999999999999999999999  446


Q ss_pred             HHHHH
Q 035782          145 KKIKE  149 (159)
Q Consensus       145 ~~~~~  149 (159)
                      +.+..
T Consensus       301 ~~~~~  305 (342)
T cd07879         301 DSFRD  305 (342)
T ss_pred             hhccc
Confidence            55543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.75  E-value=1.8e-18  Score=116.15  Aligned_cols=126  Identities=26%  Similarity=0.370  Sum_probs=87.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.++++|||++....... ........++..|++||.+.+..++.++|+||+|++++++++ |..||.....  
T Consensus       148 ili~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~--  224 (275)
T cd05046         148 CLVSSQREVKVSLLSLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD--  224 (275)
T ss_pred             EEEeCCCcEEEcccccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--
Confidence            577888999999999987543222 112223346778999999887778889999999999999998 7778754221  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                         .............             ...+...+..+.+++.+||+.+|.+|||+.++++.|.
T Consensus       225 ---~~~~~~~~~~~~~-------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         225 ---EEVLNRLQAGKLE-------------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             ---HHHHHHHHcCCcC-------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence               1111111100000             0011134567899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.75  E-value=2e-18  Score=114.67  Aligned_cols=121  Identities=24%  Similarity=0.339  Sum_probs=87.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||.+.......  .......|++.|++||...+..++.++|+|++|++++++++|..||.....   
T Consensus       134 il~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~---  208 (258)
T cd08215         134 IFLTSNGLVKLGDFGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL---  208 (258)
T ss_pred             eEEcCCCcEEECCccceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH---
Confidence            577888999999999998764432  122234678899999998888888999999999999999999999854321   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ..............              .+...+..+.+++..||..+|++|||+.+++.
T Consensus       209 --~~~~~~~~~~~~~~--------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         209 --LELALKILKGQYPP--------------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             --HHHHHHHhcCCCCC--------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence              11111111111000              01134457889999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.75  E-value=4.6e-18  Score=117.22  Aligned_cols=139  Identities=20%  Similarity=0.213  Sum_probs=85.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCc--ccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS--VTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||++.........  .......|+..|++||+..+ ..++.++|+||+|+++++++.|..||.....
T Consensus       136 ili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~  215 (332)
T cd07857         136 LLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY  215 (332)
T ss_pred             eEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH
Confidence            57888999999999999865432211  11233468889999998765 4678899999999999999999999864321


Q ss_pred             ccccHHHHHHhhcCCcccchh----hh-------hccccch-hh-hhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVI----DA-------NLARDEQ-SF-FVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~-~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      ..  ................+    .+       .....+. .. .........+.+++.+||+.||.+|||+.+++
T Consensus       216 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll  290 (332)
T cd07857         216 VD--QLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL  290 (332)
T ss_pred             HH--HHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence            10  11100000000000000    00       0000000 00 00112345788999999999999999999988

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.75  E-value=4.5e-18  Score=115.55  Aligned_cols=138  Identities=17%  Similarity=0.155  Sum_probs=86.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........  ......+++.|.|||.+.+ ..++.++|+||+|++++++++|..+|......+
T Consensus       133 ill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~  210 (298)
T cd07841         133 LLIASDGVLKLADFGLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID  210 (298)
T ss_pred             EEEcCCCCEEEccceeeeeccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH
Confidence            5788999999999999987643221  1222346778999998754 356888999999999999999977775432211


Q ss_pred             ccHHHHHHhhcCCc----c------cchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGE----L------TQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ............    +      ........................+.+++.+||+.||++|||+.|++.
T Consensus       211 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         211 --QLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             --HHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence              111111110000    0      000000000001111112234567899999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.75  E-value=5.2e-18  Score=114.18  Aligned_cols=121  Identities=20%  Similarity=0.304  Sum_probs=85.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++.......  .......++..|++||.+.+..++.++|+||+|++++++++|..||......  
T Consensus       132 i~i~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--  207 (277)
T cd06641         132 VLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--  207 (277)
T ss_pred             EEECCCCCEEEeecccceecccch--hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--
Confidence            567888999999999987654321  1122345788899999988777888999999999999999999998642211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....+..   .. ...             .+...+..+.+++.+||+.+|++||++.++++
T Consensus       208 ~~~~~~~~---~~-~~~-------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         208 KVLFLIPK---NN-PPT-------------LEGNYSKPLKEFVEACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             HHHHHHhc---CC-CCC-------------CCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            00000100   00 000             01134566889999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.75  E-value=5.3e-18  Score=115.35  Aligned_cols=139  Identities=19%  Similarity=0.187  Sum_probs=86.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........ .......++..|++||.+.+. .++.++|+||+|++++++++|+.||.....  
T Consensus       147 ili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~--  223 (302)
T cd07864         147 ILLNNKGQIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE--  223 (302)
T ss_pred             EEECCCCcEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--
Confidence            5788899999999999977643221 112223457789999987653 467889999999999999999999864321  


Q ss_pred             ccHHHHHHhhc----CCcccchhhhhc--------cccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSL----SGELTQVIDANL--------ARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~----~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ......+....    +..+..+.....        .............+..+.+++.+||+.||++||++.+++.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         224 LAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             HHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            11111111111    111111100000        0000000111123567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.75  E-value=3.5e-18  Score=117.16  Aligned_cols=120  Identities=24%  Similarity=0.282  Sum_probs=83.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||++......      ....++..|++||++.   ...++.++|+||||++++++++|..||.....
T Consensus       156 il~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~  229 (317)
T cd06635         156 ILLTEPGQVKLADFGSASIASPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA  229 (317)
T ss_pred             EEECCCCCEEEecCCCccccCCc------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH
Confidence            56788899999999998654321      2245788899999863   34578899999999999999999999754311


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                      ... ......    ....        .     .........+.+++.+||+.+|.+||++.++++.+
T Consensus       230 ~~~-~~~~~~----~~~~--------~-----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  278 (317)
T cd06635         230 MSA-LYHIAQ----NESP--------T-----LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM  278 (317)
T ss_pred             HHH-HHHHHh----ccCC--------C-----CCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence            100 000000    0000        0     00113445688999999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=3.9e-19  Score=122.47  Aligned_cols=121  Identities=21%  Similarity=0.219  Sum_probs=82.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||++........  .....+||+.|+|||++.+. .++.++|+||+|+++++|++|..||.....  
T Consensus       127 ili~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~--  202 (330)
T cd05586         127 ILLDATGHIALCDFGLSKANLTDNK--TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT--  202 (330)
T ss_pred             eEECCCCCEEEecCCcCcCCCCCCC--CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH--
Confidence            6788999999999999875422211  12335689999999988654 478899999999999999999999865321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC----cHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI----YMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp----t~~~ll~  142 (159)
                         ............ .     +   +     .......+.+++.+||+.||.+||    ++.++++
T Consensus       203 ---~~~~~~i~~~~~-~-----~---~-----~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         203 ---QQMYRNIAFGKV-R-----F---P-----KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             ---HHHHHHHHcCCC-C-----C---C-----CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence               111111100000 0     0   0     012344678899999999999998    5666654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.75  E-value=2.7e-18  Score=117.22  Aligned_cols=120  Identities=23%  Similarity=0.241  Sum_probs=82.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||++......      ....+++.|+|||.+.   ...++.++|+||+|++++++++|..||.....
T Consensus       146 il~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  219 (308)
T cd06634         146 ILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA  219 (308)
T ss_pred             EEECCCCcEEECCcccceeecCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH
Confidence            57788899999999998765322      2245788899999864   33567889999999999999999999754211


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                      ..  .......   ...         +    ..........+.+++.+||..+|.+||++.++++..
T Consensus       220 ~~--~~~~~~~---~~~---------~----~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~  268 (308)
T cd06634         220 MS--ALYHIAQ---NES---------P----ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR  268 (308)
T ss_pred             HH--HHHHHhh---cCC---------C----CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence            10  0000000   000         0    000113445688999999999999999999988543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.75  E-value=5.3e-18  Score=114.81  Aligned_cols=140  Identities=19%  Similarity=0.163  Sum_probs=83.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++.......  ......++..|+|||++.+ ..++.++|+||+|++++++++|..||.......
T Consensus       134 il~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~  211 (291)
T cd07844         134 LLISERGELKLADFGLARAKSVPSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE  211 (291)
T ss_pred             EEEcCCCCEEECccccccccCCCCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence            5788999999999999875432111  1122346778999998765 357889999999999999999999986543111


Q ss_pred             ccHHHHHHhhc---CCcccchhh------hhccc-cchh-hhh--chHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSL---SGELTQVID------ANLAR-DEQS-FFV--KMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~---~~~~~~~~~------~~~~~-~~~~-~~~--~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...........   ...+.....      ..... .... ...  .......+.+++.+||+.+|.+|||+.+++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         212 DQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             HHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence            11111110000   000000000      00000 0000 000  0011256789999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.75  E-value=3.3e-18  Score=114.05  Aligned_cols=111  Identities=21%  Similarity=0.252  Sum_probs=75.1

Q ss_pred             ceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcC-CCCcccccccccHHHH
Q 035782            8 VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRK-KPTDEMFIGEMSLRDW   85 (159)
Q Consensus         8 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~-~p~~~~~~~~~~~~~~   85 (159)
                      .++++|||++......      ....++..|+|||++.+. .++.++|+||+|++++++++|. .|+.......  ....
T Consensus       146 ~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--~~~~  217 (258)
T cd05078         146 FIKLSDPGISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--KLQF  217 (258)
T ss_pred             eEEecccccccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--HHHH
Confidence            3699999988654321      223577889999998764 4788899999999999999985 5543321110  0000


Q ss_pred             HHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           86 VNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                      ..            ...       ..+......+.+++.+||+.||++|||+.++++.|+
T Consensus       218 ~~------------~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         218 YE------------DRH-------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HH------------ccc-------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            00            000       001122356889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.75  E-value=1.6e-18  Score=121.59  Aligned_cols=95  Identities=23%  Similarity=0.194  Sum_probs=62.5

Q ss_pred             cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhh
Q 035782           32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV  111 (159)
Q Consensus        32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (159)
                      .+||+.|+|||++.+..++.++|+||+||+++++++|..||.........  ..+...     ...    + ..+    .
T Consensus       208 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~--~~i~~~-----~~~----~-~~~----~  271 (381)
T cd05626         208 LVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQ--LKVINW-----ENT----L-HIP----P  271 (381)
T ss_pred             ccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHH--HHHHcc-----ccc----c-CCC----C
Confidence            46899999999998888899999999999999999999999653221110  000000     000    0 000    0


Q ss_pred             chHHHHHHHHHHhh--hcCCCCCCCCcHHHHHH
Q 035782          112 KMDCLSSIMHLALD--CCMESPDQRIYMTDAAA  142 (159)
Q Consensus       112 ~~~~~~~~~~l~~~--cl~~~p~~Rpt~~~ll~  142 (159)
                      .......+.+++.+  |+..++..|+++.+++.
T Consensus       272 ~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~  304 (381)
T cd05626         272 QVKLSPEAVDLITKLCCSAEERLGRNGADDIKA  304 (381)
T ss_pred             CCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence            01233456667766  55667777999999985

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.75  E-value=2.5e-18  Score=129.98  Aligned_cols=116  Identities=19%  Similarity=0.224  Sum_probs=80.0

Q ss_pred             CCCceEEcccccceecCCCCCcccccccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCCcccccccccH
Q 035782            5 EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSL   82 (159)
Q Consensus         5 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~   82 (159)
                      ..+.+||+|||++..+....   ......||+.|+|||++.+  ..++.++|||||||++|++++|..||.....    .
T Consensus       177 g~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~----~  249 (1021)
T PTZ00266        177 GRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN----F  249 (1021)
T ss_pred             CCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc----H
Confidence            34568999999997653222   1233568999999998754  3578899999999999999999999864321    1


Q ss_pred             HHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           83 RDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...+......       +.+.        ....+..+.+++..||..+|.+||++.+++.
T Consensus       250 ~qli~~lk~~-------p~lp--------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        250 SQLISELKRG-------PDLP--------IKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HHHHHHHhcC-------CCCC--------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            1111110000       0000        0123456889999999999999999999983

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.74  E-value=7e-18  Score=114.37  Aligned_cols=139  Identities=19%  Similarity=0.154  Sum_probs=85.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++..+.....  ......+++.|+|||.+.+. .++.++|+||+|++++++++|..||.......
T Consensus       137 ili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~  214 (293)
T cd07843         137 LLLNNRGILKICDFGLAREYGSPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID  214 (293)
T ss_pred             EEECCCCcEEEeecCceeeccCCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            6788999999999999987643321  12234567889999987654 45788999999999999999999987532211


Q ss_pred             ccHHHHHHhhc---CCccc---chhh---hhccccch---hhhhchH-HHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSL---SGELT---QVID---ANLARDEQ---SFFVKMD-CLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~---~~~~~---~~~~---~~~~~~~~---~~~~~~~-~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ..........   ...+.   .+..   ........   ....+.. ....+.+++.+||+.+|++|||+.|++.
T Consensus       215 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         215 -QLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             -HHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence             0100000000   00000   0000   00000000   0000001 3566889999999999999999999975

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.74  E-value=6.3e-18  Score=114.62  Aligned_cols=139  Identities=19%  Similarity=0.117  Sum_probs=84.1

Q ss_pred             CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      |+++. ++.+||+|||++..+.....  ......+++.|+|||++.+ ..++.++|+||+|++++++++|..||......
T Consensus       141 il~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~  218 (295)
T cd07837         141 LLVDKQKGLLKIADLGLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL  218 (295)
T ss_pred             EEEecCCCeEEEeecccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH
Confidence            56777 88999999999976532211  1122346788999998765 35688999999999999999999998643211


Q ss_pred             cccHHHHHHhhcCC---cccchh---hhhccc--cchh-hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSG---ELTQVI---DANLAR--DEQS-FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~---~~~~~~---~~~~~~--~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      . ............   .+....   .....+  .+.. ..........+.+++.+||..||++||++.+++.
T Consensus       219 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         219 Q-QLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             H-HHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            0 111111100000   000000   000000  0000 0001134567889999999999999999999874

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.74  E-value=6.4e-18  Score=112.78  Aligned_cols=123  Identities=24%  Similarity=0.272  Sum_probs=85.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++.......   ......+++.|++||.+.+..++.++|+|++|++++++++|..||.....+. 
T Consensus       124 ilv~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-  199 (262)
T cd05572         124 LLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP-  199 (262)
T ss_pred             EEEcCCCCEEEeeCCcccccCccc---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH-
Confidence            578889999999999998764332   1122457888999999887788899999999999999999999986543211 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll~  142 (159)
                        ..........             ......+...+..+.+++.+||..+|++||+     +.|+++
T Consensus       200 --~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         200 --MEIYNDILKG-------------NGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             --HHHHHHHhcc-------------CCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence              1111110000             0000011123567899999999999999999     777764

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=2.2e-18  Score=114.93  Aligned_cols=119  Identities=20%  Similarity=0.195  Sum_probs=81.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++.....      .....++..|++||.+.+..++.++|+||+|++++++++|..||....... 
T Consensus       128 il~~~~~~~~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-  200 (260)
T cd05611         128 LLIDQTGHLKLTDFGLSRNGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-  200 (260)
T ss_pred             eEECCCCcEEEeecccceeccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-
Confidence            5788899999999999876432      122357788999999887778889999999999999999999986432211 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                          .........        ... +.  .....++..+.+++.+||..+|++||++..+.
T Consensus       201 ----~~~~~~~~~--------~~~-~~--~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~  246 (260)
T cd05611         201 ----VFDNILSRR--------INW-PE--EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQ  246 (260)
T ss_pred             ----HHHHHHhcc--------cCC-CC--cccccCCHHHHHHHHHHccCCHHHccCCCcHH
Confidence                111000000        000 00  00113456789999999999999999765443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.74  E-value=4.5e-18  Score=112.98  Aligned_cols=119  Identities=27%  Similarity=0.299  Sum_probs=86.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++......    ......+++.|++||.+.+..++.++|+||+|++++++++|..||....... 
T Consensus       134 i~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-  208 (256)
T cd08530         134 ILLVANDLVKIGDLGISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD-  208 (256)
T ss_pred             EEEecCCcEEEeeccchhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence            46778889999999999776433    1122457888999999888888889999999999999999999986532211 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ......   .....              ..+......+.+++.+||..+|++||++.++++
T Consensus       209 -~~~~~~---~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         209 -LRYKVQ---RGKYP--------------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             -HHHHHh---cCCCC--------------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence             111110   00000              011244567899999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.74  E-value=2.2e-18  Score=113.92  Aligned_cols=74  Identities=23%  Similarity=0.313  Sum_probs=59.3

Q ss_pred             CccCCC----CceEEcccccceecCCCCCc-ccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDED----MVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~----~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      ||+..+    |.|||+|||+++.+.+.-.- .....++-|.+|.|||.+.+. .|+.+.|+|+.||++.|+++-++.|.+
T Consensus       163 IlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g  242 (438)
T KOG0666|consen  163 ILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG  242 (438)
T ss_pred             EEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence            445545    99999999999998643322 234456779999999998877 689999999999999999998887765

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.74  E-value=8.7e-18  Score=114.64  Aligned_cols=141  Identities=17%  Similarity=0.119  Sum_probs=84.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc---------cccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV---------TQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKK   70 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~---------~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~   70 (159)
                      |+++.++.+||+|||+++.........         ..+...+++.|+|||...+. .++.++|+||+|++++++++|..
T Consensus       146 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~  225 (311)
T cd07866         146 ILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRP  225 (311)
T ss_pred             EEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCC
Confidence            578899999999999997653222111         11234567889999987554 57888999999999999999999


Q ss_pred             CCcccccccccHHHHHHhh---cCCccc------chhhhhc-cccch-hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHH
Q 035782           71 PTDEMFIGEMSLRDWVNKS---LSGELT------QVIDANL-ARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQRIYMTD  139 (159)
Q Consensus        71 p~~~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~-~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~  139 (159)
                      ||....... .........   ....+.      ....... ...+. ...........+.+++.+||..||.+|||+.+
T Consensus       226 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~e  304 (311)
T cd07866         226 ILQGKSDID-QLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASD  304 (311)
T ss_pred             CCCCCCHHH-HHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHH
Confidence            986432211 111111000   000000      0000000 00000 00001122356889999999999999999998


Q ss_pred             HHH
Q 035782          140 AAA  142 (159)
Q Consensus       140 ll~  142 (159)
                      ++.
T Consensus       305 ll~  307 (311)
T cd07866         305 ALE  307 (311)
T ss_pred             Hhc
Confidence            874

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.74  E-value=5.7e-18  Score=117.29  Aligned_cols=135  Identities=23%  Similarity=0.227  Sum_probs=84.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++......     .....++..|++||.+.+. .++.++|+||+|++++++++|..||.......
T Consensus       149 ill~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~  223 (343)
T cd07851         149 IAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID  223 (343)
T ss_pred             eEECCCCCEEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            57888999999999999765322     1224577889999987553 56788999999999999999999986432111


Q ss_pred             ccHHHHHHhhcCC------------cccchhhhhccccchhh-hhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSG------------ELTQVIDANLARDEQSF-FVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .+.. +......            ....++........... .........+.+++.+||+.||.+|||+.+|+.
T Consensus       224 -~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         224 -QLKR-IMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             -HHHH-HHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence             0111 1010000            00001000000000000 000123567899999999999999999999874

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.74  E-value=2.2e-18  Score=120.51  Aligned_cols=126  Identities=19%  Similarity=0.223  Sum_probs=82.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC----ccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG----IVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~----~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      ||++.++.+||+|||++........ ......+||+.|+|||++...    .++.++|+||+|+++++|++|..||....
T Consensus       173 Ill~~~~~ikL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~  251 (371)
T cd05622         173 MLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS  251 (371)
T ss_pred             EEECCCCCEEEEeCCceeEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC
Confidence            5788999999999999987643221 122345699999999987653    27789999999999999999999996532


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC--CCcHHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ--RIYMTDAAAK  143 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~~ll~~  143 (159)
                      ..     .......... .          ....+........+.+++..|+..++.+  |+++.++++.
T Consensus       252 ~~-----~~~~~i~~~~-~----------~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         252 LV-----GTYSKIMNHK-N----------SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             HH-----HHHHHHHcCC-C----------cccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence            11     1111100000 0          0000111134556788899999844433  7889888863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.74  E-value=9.6e-18  Score=110.30  Aligned_cols=123  Identities=16%  Similarity=0.155  Sum_probs=87.3

Q ss_pred             CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHH
Q 035782            5 EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRD   84 (159)
Q Consensus         5 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~   84 (159)
                      .+..+||+|||+|+.-..   .....+.+-||.|.|||++...+|....|+||+|+++|-+++|.+||.......     
T Consensus       199 ~na~lKLtDfGFAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a-----  270 (400)
T KOG0604|consen  199 PNAPLKLTDFGFAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----  270 (400)
T ss_pred             CCcceEecccccccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-----
Confidence            456789999999987532   223455778999999999999999999999999999999999999997643211     


Q ss_pred             HHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           85 WVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                           ++...+.-+....-..+..  ......+...++++..|..+|++|.|++++..
T Consensus       271 -----ispgMk~rI~~gqy~FP~p--EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  271 -----ISPGMKRRIRTGQYEFPEP--EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             -----CChhHHhHhhccCccCCCh--hHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence                 1122222221111111111  11245667788999999999999999998874

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=1.6e-18  Score=120.81  Aligned_cols=125  Identities=21%  Similarity=0.252  Sum_probs=83.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc------------------------------------ccccccccccccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV------------------------------------TQTMTMATIGYMAPEYG   44 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~------------------------------------~~~~~~gt~~~~~pe~~   44 (159)
                      ||++.++.+||+|||++..+.......                                    .....+||+.|+|||++
T Consensus       132 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  211 (364)
T cd05599         132 LLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVF  211 (364)
T ss_pred             eEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHH
Confidence            688999999999999987643211000                                    01124689999999999


Q ss_pred             CCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHh
Q 035782           45 SEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLAL  124 (159)
Q Consensus        45 ~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  124 (159)
                      ....++.++|+||+||+++++++|..||......     .........  ...    +. .+    ......+.+.+++.
T Consensus       212 ~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~-----~~~~~i~~~--~~~----~~-~~----~~~~~s~~~~~li~  275 (364)
T cd05599         212 LQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQ-----ETYRKIINW--KET----LQ-FP----DEVPLSPEAKDLIK  275 (364)
T ss_pred             cCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHH-----HHHHHHHcC--CCc----cC-CC----CCCCCCHHHHHHHH
Confidence            8888999999999999999999999998653211     111110000  000    00 00    00123456778888


Q ss_pred             hhcCCCCCCCCc---HHHHHH
Q 035782          125 DCCMESPDQRIY---MTDAAA  142 (159)
Q Consensus       125 ~cl~~~p~~Rpt---~~~ll~  142 (159)
                      +|+. +|.+|++   +.+++.
T Consensus       276 ~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         276 RLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             HHcc-CHhhcCCCCCHHHHhc
Confidence            8886 9999998   888875

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=5e-18  Score=116.23  Aligned_cols=124  Identities=23%  Similarity=0.257  Sum_probs=85.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCc---------------------------ccccccccccccccccccCCCccccch
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS---------------------------VTQTMTMATIGYMAPEYGSEGIVSTKC   53 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~---------------------------~~~~~~~gt~~~~~pe~~~~~~~~~~~   53 (159)
                      |+++.++.++|+|||++.........                           .......|+..|++||++.+..++.++
T Consensus       134 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~  213 (316)
T cd05574         134 ILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAV  213 (316)
T ss_pred             eEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchH
Confidence            57888999999999998754321110                           011123578889999999888888999


Q ss_pred             hhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC
Q 035782           54 DVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ  133 (159)
Q Consensus        54 dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  133 (159)
                      |+||+|++++++++|..||....... .+..            .......     .+.....+..+.+++.+||..||++
T Consensus       214 Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~------------~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~  275 (316)
T cd05574         214 DWWTLGILLYEMLYGTTPFKGSNRDE-TFSN------------ILKKEVT-----FPGSPPVSSSARDLIRKLLVKDPSK  275 (316)
T ss_pred             HHHHHHHHHHHHhhCCCCCCCCchHH-HHHH------------HhcCCcc-----CCCccccCHHHHHHHHHHccCCHhH
Confidence            99999999999999999986532211 0100            0000000     0001124567999999999999999


Q ss_pred             CCc----HHHHHH
Q 035782          134 RIY----MTDAAA  142 (159)
Q Consensus       134 Rpt----~~~ll~  142 (159)
                      |||    +.+++.
T Consensus       276 R~s~~~~~~~ll~  288 (316)
T cd05574         276 RLGSKRGAAEIKQ  288 (316)
T ss_pred             CCCchhhHHHHHc
Confidence            999    888775

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.73  E-value=1.8e-17  Score=111.70  Aligned_cols=139  Identities=16%  Similarity=0.165  Sum_probs=84.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.++|+|||.+........   .....++..|+|||++.. ..++.++|+||||++++++++|..||......+
T Consensus       130 i~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~  206 (283)
T cd07830         130 LLVSGPEVVKIADFGLAREIRSRPP---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID  206 (283)
T ss_pred             EEEcCCCCEEEeecccceeccCCCC---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH
Confidence            5788899999999999976643222   223457888999997744 457889999999999999999999886432211


Q ss_pred             ccH--HHHHHhhcCCcccc------hhhhhccccc-hh-hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSL--RDWVNKSLSGELTQ------VIDANLARDE-QS-FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~--~~~~~~~~~~~~~~------~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...  ...........+..      .....+.... .. ..........+.+++.+||+.+|.+|||+.|++.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         207 QLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             HHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            100  00000000000000      0000000000 00 0000112467889999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.73  E-value=1.9e-18  Score=121.22  Aligned_cols=44  Identities=30%  Similarity=0.389  Sum_probs=40.2

Q ss_pred             cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782           32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus        32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      .+||+.|+|||++.+..++.++|+||+||++++|++|..||...
T Consensus       208 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  251 (382)
T cd05625         208 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQ  251 (382)
T ss_pred             cccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCC
Confidence            46899999999998888999999999999999999999999653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.73  E-value=5.1e-18  Score=114.94  Aligned_cols=116  Identities=21%  Similarity=0.208  Sum_probs=83.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++......     .....+++.|++||.+.+...+.++|+||+|++++++++|..||.....   
T Consensus       132 ili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---  203 (290)
T cd05580         132 LLLDSDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP---  203 (290)
T ss_pred             EEECCCCCEEEeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH---
Confidence            57889999999999999876433     2234578899999998877788899999999999999999999864321   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll  141 (159)
                        ............               ..+......+.+++.+||..||.+|+     ++.|++
T Consensus       204 --~~~~~~~~~~~~---------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~  252 (290)
T cd05580         204 --IQIYEKILEGKV---------------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK  252 (290)
T ss_pred             --HHHHHHHhcCCc---------------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence              111111000000               00112345788999999999999999     777776

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.73  E-value=3.9e-18  Score=118.95  Aligned_cols=75  Identities=28%  Similarity=0.367  Sum_probs=59.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCc---------------------------------ccccccccccccccccccCCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS---------------------------------VTQTMTMATIGYMAPEYGSEG   47 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------~~~~~~~gt~~~~~pe~~~~~   47 (159)
                      ||++.++.+||+|||+++.+......                                 ......+||+.|+|||++.+.
T Consensus       132 ILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~  211 (363)
T cd05628         132 LLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT  211 (363)
T ss_pred             eEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC
Confidence            68899999999999998754321100                                 001234699999999999888


Q ss_pred             ccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782           48 IVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus        48 ~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      .++.++|+||+|+++++|++|..||...
T Consensus       212 ~~~~~~DvwSlGvil~ell~G~~Pf~~~  239 (363)
T cd05628         212 GYNKLCDWWSLGVIMYEMLIGYPPFCSE  239 (363)
T ss_pred             CCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence            8999999999999999999999999653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.73  E-value=1.3e-17  Score=110.94  Aligned_cols=122  Identities=25%  Similarity=0.323  Sum_probs=84.4

Q ss_pred             CccCCCC-ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDM-VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |++++++ .+||+|||.+........  ......|++.|+|||+..+..++.++|+||+|++++++++|..||.....  
T Consensus       132 il~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--  207 (257)
T cd08225         132 IFLSKNGMVAKLGDFGIARQLNDSME--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL--  207 (257)
T ss_pred             EEEcCCCCeEEecccccchhccCCcc--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--
Confidence            4666664 569999999877643222  12224578889999998777788999999999999999999999864321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                         .............        ..      ....+..+.+++.+||..+|++|||+.++++.
T Consensus       208 ---~~~~~~~~~~~~~--------~~------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         208 ---HQLVLKICQGYFA--------PI------SPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             ---HHHHHHHhcccCC--------CC------CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence               1111111111100        00      11234568899999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.73  E-value=3.9e-18  Score=126.84  Aligned_cols=123  Identities=15%  Similarity=0.128  Sum_probs=83.6

Q ss_pred             CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHH
Q 035782            4 DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLR   83 (159)
Q Consensus         4 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~   83 (159)
                      ...+..++.|||.+...............+||+.|+|||++.+..++.++|+|||||++||+++|..||......     
T Consensus       512 ~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~-----  586 (669)
T cd05610         512 TPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQ-----  586 (669)
T ss_pred             CCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-----
Confidence            334456778888887654333323334467999999999998888999999999999999999999998643211     


Q ss_pred             HHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           84 DWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      ..+....        ..... .+.   ........+..++.+||..||.+||++.++++.
T Consensus       587 ~~~~~il--------~~~~~-~p~---~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         587 QVFQNIL--------NRDIP-WPE---GEEKLSVNAQNAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             HHHHHHH--------hcCCC-CCc---ccccCCHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence            1111110        00000 000   011234567888999999999999999999853

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.73  E-value=1e-17  Score=112.75  Aligned_cols=123  Identities=19%  Similarity=0.232  Sum_probs=84.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||.+.......   ......++..|++||+..+..++.++|+||+|++++++++|..||....... 
T Consensus       126 il~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-  201 (277)
T cd05577         126 VLLDDHGNVRISDLGLAVELKGGK---KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-  201 (277)
T ss_pred             EEECCCCCEEEccCcchhhhccCC---ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-
Confidence            578889999999999987653211   1122346778999999888778889999999999999999999986532210 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                      ........ ..            ..  ....+......+.+++.+||+.||++||     ++.+++.
T Consensus       202 ~~~~~~~~-~~------------~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         202 EKEELKRR-TL------------EM--AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             cHHHHHhc-cc------------cc--cccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence            00010000 00            00  0001123356788999999999999999     6666763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.73  E-value=1.4e-17  Score=111.44  Aligned_cols=127  Identities=22%  Similarity=0.277  Sum_probs=84.7

Q ss_pred             CccCCCC-ceEEcccccceecCCCCC--cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDM-VAHVSDFGISKLLGDGDD--SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~-~~kl~Dfg~~~~~~~~~~--~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++ .+||+|||.+........  ........++..|++||.+.+..++.++|+|++|++++++++|..||.....
T Consensus       134 il~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~  213 (268)
T cd06630         134 LLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH  213 (268)
T ss_pred             EEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence            4566555 699999999877643211  1112234578899999998887888999999999999999999999864221


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  .....+.......        .     ....+......+.+++..||..+|++||++.++++
T Consensus       214 ~--~~~~~~~~~~~~~--------~-----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         214 S--NHLALIFKIASAT--------T-----APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             c--chHHHHHHHhccC--------C-----CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            1  1111111000000        0     00111234567888999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.73  E-value=1.8e-17  Score=114.21  Aligned_cols=138  Identities=20%  Similarity=0.202  Sum_probs=84.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||.+......     .....++..|++||.+.+ ..++.++|+||+|++++++++|..||.......
T Consensus       139 ili~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~  213 (328)
T cd07856         139 ILINENCDLKICDFGLARIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN  213 (328)
T ss_pred             EeECCCCCEEeCccccccccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            57788899999999998764321     122346788999998765 467889999999999999999999986432110


Q ss_pred             c--cHH--------HHHHhhcCCcccchhhhhccccchh-hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           80 M--SLR--------DWVNKSLSGELTQVIDANLARDEQS-FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        80 ~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      .  ...        ++...........++.......... ..........+.+++.+||+.+|++|||+.+++..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         214 QFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0  000        0000000000000000000000000 00011235678999999999999999999998743

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.73  E-value=3.4e-18  Score=119.48  Aligned_cols=126  Identities=19%  Similarity=0.252  Sum_probs=82.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC----ccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG----IVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~----~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      ||++.++.+||+|||++........ .......||+.|+|||++.+.    .++.++|+||+|++++++++|..||....
T Consensus       173 ILl~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~  251 (370)
T cd05621         173 MLLDKHGHLKLADFGTCMKMDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS  251 (370)
T ss_pred             EEECCCCCEEEEecccceecccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC
Confidence            6889999999999999987643222 122345699999999987653    36789999999999999999999996432


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC--CCcHHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ--RIYMTDAAAK  143 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~~ll~~  143 (159)
                      ..     .....        +.......   ..+........+.+++..|+..++.+  |+++.++++.
T Consensus       252 ~~-----~~~~~--------i~~~~~~~---~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         252 LV-----GTYSK--------IMDHKNSL---NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             HH-----HHHHH--------HHhCCccc---CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            11     11111        00000000   00001123455777888888755543  8899998853

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.72  E-value=6.7e-18  Score=112.60  Aligned_cols=124  Identities=20%  Similarity=0.254  Sum_probs=83.6

Q ss_pred             CccCCCCceEEcccccceecCCCCC------cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD------SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      |+++.++.+||+|||++........      ........++..|++||.......+.++|+||+|++++++++|..||..
T Consensus       124 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~  203 (265)
T cd05579         124 ILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHG  203 (265)
T ss_pred             eEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence            5788999999999999876432211      1122334577889999998877788899999999999999999999864


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ....     ..........        ..     .+.....+..+.+++.+||+.+|++|||+..+.+
T Consensus       204 ~~~~-----~~~~~~~~~~--------~~-----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~  253 (265)
T cd05579         204 ETPE-----EIFQNILNGK--------IE-----WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEE  253 (265)
T ss_pred             CCHH-----HHHHHHhcCC--------cC-----CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHH
Confidence            3211     1111110000        00     0000012567889999999999999999944433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.72  E-value=3.5e-17  Score=112.98  Aligned_cols=140  Identities=18%  Similarity=0.162  Sum_probs=85.6

Q ss_pred             CccCCCCceEEcccccceecCCCCC------------cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHh
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD------------SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFT   67 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~   67 (159)
                      |+++.++.+||+|||.+........            ........++..|++||++.+. .++.++|+||+|++++++++
T Consensus       150 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~t  229 (335)
T PTZ00024        150 IFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT  229 (335)
T ss_pred             eEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHh
Confidence            5788899999999999976641110            1111223467789999988654 46889999999999999999


Q ss_pred             cCCCCcccccccccHHHHHHhhcC----Ccccchhh-----hhccccch-hhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           68 RKKPTDEMFIGEMSLRDWVNKSLS----GELTQVID-----ANLARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        68 ~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                      |..||......+  ....+.....    ..+.....     +.....+. ...........+.+++.+||+.+|++|||+
T Consensus       230 g~~p~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~  307 (335)
T PTZ00024        230 GKPLFPGENEID--QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA  307 (335)
T ss_pred             CCCCCCCCCHHH--HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH
Confidence            999986532211  1111111110    00111000     00000000 000111234568899999999999999999


Q ss_pred             HHHHH
Q 035782          138 TDAAA  142 (159)
Q Consensus       138 ~~ll~  142 (159)
                      ++++.
T Consensus       308 ~~~l~  312 (335)
T PTZ00024        308 KEALK  312 (335)
T ss_pred             HHHhc
Confidence            99985

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.72  E-value=1.1e-17  Score=114.44  Aligned_cols=118  Identities=25%  Similarity=0.252  Sum_probs=81.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||++.....      .+...|+..|++||++.   ...++.++|+||+|++++++++|..||.....
T Consensus       152 ili~~~~~~kL~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~  225 (313)
T cd06633         152 ILLTEPGQVKLADFGSASKSSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA  225 (313)
T ss_pred             EEECCCCCEEEeecCCCcccCC------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Confidence            5678889999999999864321      12345788999999874   34577889999999999999999999754321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  ........   ......             ........+.+++.+||+.+|.+||++.+++.
T Consensus       226 ~--~~~~~~~~---~~~~~~-------------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         226 M--SALYHIAQ---NDSPTL-------------QSNEWTDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             H--HHHHHHHh---cCCCCC-------------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1  11111100   000000             00123345788999999999999999999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=5.4e-18  Score=118.40  Aligned_cols=115  Identities=22%  Similarity=0.305  Sum_probs=85.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      .+++.+|-+||.|||+|+.+..+....   +++|||.|.|||++.+..+..++|.|++|+.++|+++|.+||.+..+.. 
T Consensus       551 llLd~~Gy~KLVDFGFAKki~~g~KTw---TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk-  626 (732)
T KOG0614|consen  551 LLLDNRGYLKLVDFGFAKKIGSGRKTW---TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK-  626 (732)
T ss_pred             eeeccCCceEEeehhhHHHhccCCcee---eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH-
Confidence            378999999999999999987655433   3789999999999999999999999999999999999999998643211 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY  136 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  136 (159)
                      .+             +++-+.+..-    ..|..+.....+++++.+..+|++|.-
T Consensus       627 tY-------------n~ILkGid~i----~~Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  627 TY-------------NLILKGIDKI----EFPRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             HH-------------HHHHhhhhhh----hcccccchhHHHHHHHHHhcCcHhhhc
Confidence            11             1111111110    011244556778899999999999965

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.72  E-value=3.3e-17  Score=110.30  Aligned_cols=137  Identities=22%  Similarity=0.171  Sum_probs=85.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||.+........  ......++..|+|||.+.+. .++.+.|+|++|++++++++|..||......+
T Consensus       129 i~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~  206 (282)
T cd07829         129 ILINRDGVLKLADFGLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID  206 (282)
T ss_pred             EEEcCCCCEEEecCCcccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH
Confidence            5778889999999999977643221  12223456789999987665 67888999999999999999999986532111


Q ss_pred             ccHHHHHHhh---cCCc---------ccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKS---LSGE---------LTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .........   ....         ......... ..... .........+.+++..||..||++||++++++.
T Consensus       207 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         207 -QLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFP-PKDLE-KVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             -HHHHHHHHhCCCcHHHHHhhcccccccccccccC-ccchH-HhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence             000000000   0000         000000000 00000 001122567999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.72  E-value=1.3e-17  Score=111.13  Aligned_cols=121  Identities=26%  Similarity=0.287  Sum_probs=85.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++.......   ......|+..|++||...+..++.++|+||+|++++++++|..||......  
T Consensus       131 il~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--  205 (258)
T cd05578         131 ILLDEQGHVHITDFNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--  205 (258)
T ss_pred             eEEcCCCCEEEeecccccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--
Confidence            578899999999999987754332   122345778899999988877889999999999999999999998753321  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH--HHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM--TDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~--~~ll  141 (159)
                       ............ .             ...+...+..+.+++.+||..||.+||++  .|++
T Consensus       206 -~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         206 -IRDQIRAKQETA-D-------------VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             -HHHHHHHHhccc-c-------------ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence             111111111000 0             00111334678899999999999999999  5554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.72  E-value=1.6e-18  Score=121.42  Aligned_cols=125  Identities=23%  Similarity=0.236  Sum_probs=80.7

Q ss_pred             CccCCCCceEEcccccceecCCCCC-----------------------------------------cccccccccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD-----------------------------------------SVTQTMTMATIGYM   39 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~-----------------------------------------~~~~~~~~gt~~~~   39 (159)
                      ||++.++.+||+|||++..+.....                                         .......+||+.|+
T Consensus       132 ill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  211 (376)
T cd05598         132 ILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYI  211 (376)
T ss_pred             EEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCcccc
Confidence            5788999999999999753321000                                         00011346899999


Q ss_pred             cccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHH
Q 035782           40 APEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI  119 (159)
Q Consensus        40 ~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (159)
                      |||++.+..++.++|+||+||+++++++|..||........  ...+.... ..        ..     .+........+
T Consensus       212 aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~--~~~i~~~~-~~--------~~-----~~~~~~~s~~~  275 (376)
T cd05598         212 APEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAET--QLKVINWE-TT--------LH-----IPSQAKLSREA  275 (376)
T ss_pred             CHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHH--HHHHhccC-cc--------cc-----CCCCCCCCHHH
Confidence            99999888899999999999999999999999965332111  00000000 00        00     00001233456


Q ss_pred             HHHHhhhcCCCCCCCC---cHHHHHH
Q 035782          120 MHLALDCCMESPDQRI---YMTDAAA  142 (159)
Q Consensus       120 ~~l~~~cl~~~p~~Rp---t~~~ll~  142 (159)
                      .+++.+|+ .+|.+|+   ++.++++
T Consensus       276 ~~li~~l~-~~p~~R~~~~t~~ell~  300 (376)
T cd05598         276 SDLILRLC-CGAEDRLGKNGADEIKA  300 (376)
T ss_pred             HHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence            66777765 5999999   8898884

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.72  E-value=1.5e-17  Score=114.45  Aligned_cols=147  Identities=19%  Similarity=0.236  Sum_probs=85.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-----cccccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCCc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-----TQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPTD   73 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~~   73 (159)
                      ||++.++.++++||+.+..........     ......++..|+|||++.+  ..++.++|+||+|++++++++|..||.
T Consensus       132 il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  211 (327)
T cd08227         132 ILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK  211 (327)
T ss_pred             EEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            578888999999998754432111100     0111245677999999865  357889999999999999999999996


Q ss_pred             ccccccccHHHHHHhhcCCcc---------------cchhhhhcc---------c---cchhhhhchHHHHHHHHHHhhh
Q 035782           74 EMFIGEMSLRDWVNKSLSGEL---------------TQVIDANLA---------R---DEQSFFVKMDCLSSIMHLALDC  126 (159)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~---------~---~~~~~~~~~~~~~~~~~l~~~c  126 (159)
                      ....... .........+...               +...+....         .   .....+........+.+++.+|
T Consensus       212 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  290 (327)
T cd08227         212 DMPATQM-LLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQC  290 (327)
T ss_pred             CcchhHH-HHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHH
Confidence            5322111 0000000000000               000000000         0   0000001112345788999999


Q ss_pred             cCCCCCCCCcHHHHHH--HHHHHH
Q 035782          127 CMESPDQRIYMTDAAA--KLKKIK  148 (159)
Q Consensus       127 l~~~p~~Rpt~~~ll~--~l~~~~  148 (159)
                      |+.||++|||+.++++  .++++.
T Consensus       291 l~~dP~~Rpt~~ell~~p~f~~~~  314 (327)
T cd08227         291 LQRNPDARPSASTLLNHSFFKQIK  314 (327)
T ss_pred             HhhCchhcCCHHHHhcChhhhhcc
Confidence            9999999999999985  344443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.72  E-value=1.7e-17  Score=114.92  Aligned_cols=140  Identities=13%  Similarity=0.152  Sum_probs=81.9

Q ss_pred             CccC-CCCceEEcccccceecCCCCCcc-cccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLD-EDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~-~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++ .++.+|++|||+++......... ......++..|+|||.+.. ..++.++|+||+|++++++++|..||.....
T Consensus       145 ili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~  224 (342)
T cd07854         145 VFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHE  224 (342)
T ss_pred             EEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            3565 45678999999997653211111 1122357888999997654 4577889999999999999999999964321


Q ss_pred             ccccHHHHHHhhcCC---cccchh---hhhcc-----ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           78 GEMSLRDWVNKSLSG---ELTQVI---DANLA-----RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~---~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      .. ............   ......   .....     ...............+.+++.+||..||.+|||+++++
T Consensus       225 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell  298 (342)
T cd07854         225 LE-QMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEAL  298 (342)
T ss_pred             HH-HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHh
Confidence            11 011111000000   000000   00000     00000000112345688999999999999999999998

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.72  E-value=7.1e-18  Score=127.79  Aligned_cols=117  Identities=20%  Similarity=0.225  Sum_probs=74.0

Q ss_pred             CCCceEEcccccceecCCCCC--------------cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCC
Q 035782            5 EDMVAHVSDFGISKLLGDGDD--------------SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKK   70 (159)
Q Consensus         5 ~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~   70 (159)
                      .++.+|++|||+++.......              ........||++|+|||++.+..++.++|||||||+++||+++..
T Consensus       134 ~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~  213 (793)
T PLN00181        134 EDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVS  213 (793)
T ss_pred             ccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCC
Confidence            345677788887764321000              000112357889999999988889999999999999999999877


Q ss_pred             CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           71 PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        71 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      |+.....   .........        ..    +.      ..........++.+||+.+|.+||++.|+++
T Consensus       214 ~~~~~~~---~~~~~~~~~--------~~----~~------~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        214 SREEKSR---TMSSLRHRV--------LP----PQ------ILLNWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             chhhHHH---HHHHHHHhh--------cC----hh------hhhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence            7542110   000000000        00    00      0012234567888999999999999999974

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.72  E-value=4.7e-17  Score=112.07  Aligned_cols=153  Identities=18%  Similarity=0.241  Sum_probs=89.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-----cccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-----TQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTD   73 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~   73 (159)
                      |+++.++.+|++||+.+..........     ......++..|++||++.+.  .++.++|+||+|++++++++|..||.
T Consensus       132 ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~  211 (328)
T cd08226         132 ILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQ  211 (328)
T ss_pred             EEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            577888999999998654332111100     00111245679999998663  46789999999999999999999986


Q ss_pred             ccccccccHHHHHHhhcC-C----------------------cc-cchhhh----hccccchhhhhchHHHHHHHHHHhh
Q 035782           74 EMFIGEMSLRDWVNKSLS-G----------------------EL-TQVIDA----NLARDEQSFFVKMDCLSSIMHLALD  125 (159)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~-~----------------------~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~  125 (159)
                      ....... .......... .                      .. ...+..    .........+.+......+.+++.+
T Consensus       212 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  290 (328)
T cd08226         212 DMLRTQM-LLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVEL  290 (328)
T ss_pred             CcChHHH-HHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHH
Confidence            5321111 0000000000 0                      00 000000    0000000111123456788999999


Q ss_pred             hcCCCCCCCCcHHHHH--HHHHHHHHHhhhh
Q 035782          126 CCMESPDQRIYMTDAA--AKLKKIKEKFLDD  154 (159)
Q Consensus       126 cl~~~p~~Rpt~~~ll--~~l~~~~~~~~~~  154 (159)
                      ||..||++|||+.+++  ..++.+.++....
T Consensus       291 ~l~~dP~~Rpta~e~l~~~~~~~~~~~~~~~  321 (328)
T cd08226         291 CLQQDPEKRPSASSLLSHAFFKQVKEQTQGS  321 (328)
T ss_pred             HccCCcccCCCHHHHhhCHHHHHHHHhcccc
Confidence            9999999999999997  6677776664443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.72  E-value=5.5e-18  Score=123.66  Aligned_cols=138  Identities=17%  Similarity=0.145  Sum_probs=77.9

Q ss_pred             CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCCC----------------------ccccchhhHh
Q 035782            1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG----------------------IVSTKCDVYS   57 (159)
Q Consensus         1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~----------------------~~~~~~dv~s   57 (159)
                      ||++. ++.+||+|||+++.+...... ......+++.|+|||.+...                      .++.++||||
T Consensus       286 ILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS  364 (566)
T PLN03225        286 IIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS  364 (566)
T ss_pred             EEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence            57774 689999999999865432222 23345789999999954321                      2334569999


Q ss_pred             HHHHHHHHHhcCCCCcccccccccHHHHHHhhcC--Ccccchhhhhccccch-hhhhchHHHHHHHHHHhhhcCCCCCCC
Q 035782           58 YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLS--GELTQVIDANLARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQR  134 (159)
Q Consensus        58 ~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~R  134 (159)
                      +||++++|+++..++....   ..+...+.....  ..+...+.+....... ............++++.+|++.||.+|
T Consensus       365 lGviL~el~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR  441 (566)
T PLN03225        365 AGLIFLQMAFPNLRSDSNL---IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQR  441 (566)
T ss_pred             HHHHHHHHHhCcCCCchHH---HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccC
Confidence            9999999998665533210   001000100000  0001111110000000 000001122346789999999999999


Q ss_pred             CcHHHHHH
Q 035782          135 IYMTDAAA  142 (159)
Q Consensus       135 pt~~~ll~  142 (159)
                      ||+.++++
T Consensus       442 ~ta~e~L~  449 (566)
T PLN03225        442 ISAKAALA  449 (566)
T ss_pred             CCHHHHhC
Confidence            99999985

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=2.7e-17  Score=109.06  Aligned_cols=121  Identities=21%  Similarity=0.300  Sum_probs=85.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||.+.........  .....++..|++||...+...+.++|+|++|++++++++|..||.....   
T Consensus       130 i~i~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~---  204 (254)
T cd06627         130 ILTTKDGVVKLADFGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP---  204 (254)
T ss_pred             EEECCCCCEEEeccccceecCCCccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH---
Confidence            56788899999999999876433221  2234578889999998777778899999999999999999999864321   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ....... ......              ..+...+..+.+++.+||..+|++|||+.+++.
T Consensus       205 -~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         205 -MAALFRI-VQDDHP--------------PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             -HHHHHHH-hccCCC--------------CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence             1111100 000000              001133557889999999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.71  E-value=4.2e-17  Score=109.71  Aligned_cols=110  Identities=24%  Similarity=0.267  Sum_probs=74.8

Q ss_pred             ceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHH-hcCCCCcccccccccHHHH
Q 035782            8 VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETF-TRKKPTDEMFIGEMSLRDW   85 (159)
Q Consensus         8 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~-~~~~p~~~~~~~~~~~~~~   85 (159)
                      .+|++|||++......      ....++..|++||.+.+ ..++.++|+||||+++++++ .|..||.......  ....
T Consensus       162 ~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~  233 (274)
T cd05076         162 FIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--KERF  233 (274)
T ss_pred             eeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--HHHH
Confidence            4799999987654221      11346778999998765 45788999999999999985 6888876432111  1111


Q ss_pred             HHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           86 VNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                      ....            . ..      +......+.+++.+||+.+|++|||+.++++.|
T Consensus       234 ~~~~------------~-~~------~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         234 YEKK------------H-RL------PEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             HHhc------------c-CC------CCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            1100            0 00      001123578899999999999999999999877

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.71  E-value=2.7e-17  Score=111.55  Aligned_cols=139  Identities=20%  Similarity=0.161  Sum_probs=83.0

Q ss_pred             CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      |+++. ++.+||+|||++........  ......+++.|++||++.+. .++.++|+||+|++++++++|..||......
T Consensus       133 ill~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~  210 (294)
T PLN00009        133 LLIDRRTNALKLADFGLARAFGIPVR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI  210 (294)
T ss_pred             EEEECCCCEEEEcccccccccCCCcc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            45663 56799999999976532211  12234578899999987654 5688999999999999999999998643211


Q ss_pred             cccHHHHHHh---hcCCcccc---hhhh--hcc--ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNK---SLSGELTQ---VIDA--NLA--RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~---~~~~~~~~---~~~~--~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      + ........   .....+..   +.+.  ...  ...............+.+++.+|++.+|.+||++.+++.
T Consensus       211 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        211 D-ELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             H-HHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1 11111100   00000000   0000  000  000000011123456889999999999999999999885

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.71  E-value=4.4e-17  Score=103.94  Aligned_cols=119  Identities=19%  Similarity=0.221  Sum_probs=91.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      +|++.++.+|++|||.+..-.    ...+.+.+||.-|.+||...+..++..+|+|++|+..||++.|.+||+... .+.
T Consensus       155 lLlg~~~~lkiAdfGwsV~~p----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~e  229 (281)
T KOG0580|consen  155 LLLGSAGELKIADFGWSVHAP----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSE  229 (281)
T ss_pred             hccCCCCCeeccCCCceeecC----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHH
Confidence            578899999999999997643    334566889999999999999999999999999999999999999998643 111


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      .+.......+.                   .|........+++.+|+..+|.+|.+..|++..
T Consensus       230 tYkrI~k~~~~-------------------~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  230 TYKRIRKVDLK-------------------FPSTISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             HHHHHHHcccc-------------------CCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            12111111110                   012455678889999999999999999988753

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.71  E-value=1.5e-17  Score=111.79  Aligned_cols=122  Identities=21%  Similarity=0.263  Sum_probs=84.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCc------------------ccccccccccccccccccCCCccccchhhHhHHHHH
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS------------------VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLL   62 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~------------------~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~   62 (159)
                      |+++.++.++++|||++.........                  .......++..|++||+......+.++|+||+|+++
T Consensus       133 i~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l  212 (280)
T cd05581         133 ILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCII  212 (280)
T ss_pred             eEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHH
Confidence            57788899999999998765432210                  112234567889999998877788899999999999


Q ss_pred             HHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH----H
Q 035782           63 METFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM----T  138 (159)
Q Consensus        63 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~----~  138 (159)
                      +++++|..||.....  .........   .          ..     ..+...+..+.+++.+||+.+|++||++    +
T Consensus       213 ~~l~~g~~p~~~~~~--~~~~~~~~~---~----------~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~  272 (280)
T cd05581         213 YQMLTGKPPFRGSNE--YLTFQKILK---L----------EY-----SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYD  272 (280)
T ss_pred             HHHHhCCCCCCCccH--HHHHHHHHh---c----------CC-----CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHH
Confidence            999999999875321  000000000   0          00     0011235678899999999999999999    7


Q ss_pred             HHHH
Q 035782          139 DAAA  142 (159)
Q Consensus       139 ~ll~  142 (159)
                      ++++
T Consensus       273 ~ll~  276 (280)
T cd05581         273 ELKA  276 (280)
T ss_pred             HHhc
Confidence            7664

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.71  E-value=3.7e-17  Score=113.34  Aligned_cols=135  Identities=20%  Similarity=0.197  Sum_probs=83.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++......     .....++..|+|||.+.+ ..++.++|+||+|++++++++|..||.......
T Consensus       151 Ill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~  225 (345)
T cd07877         151 LAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID  225 (345)
T ss_pred             EEEcCCCCEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            57888999999999998764321     122457888999998765 457888999999999999999999986432111


Q ss_pred             ccHHHHHHhhcCCcccchhh-----------hhccccchhh--hhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVID-----------ANLARDEQSF--FVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .... +..........+..           ..+...+...  .........+.+++.+|++.||.+||++.+++.
T Consensus       226 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  299 (345)
T cd07877         226 -QLKL-ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  299 (345)
T ss_pred             -HHHH-HHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence             0000 00000000000000           0000000000  000123456889999999999999999999884

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.71  E-value=2.6e-17  Score=111.36  Aligned_cols=128  Identities=23%  Similarity=0.230  Sum_probs=84.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc--cccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI--VSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~--~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      |+++.++.++|+|||+++........ ......|+..|++||...+..  .+.++|+||+|++++++++|..||..... 
T Consensus       136 il~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-  213 (288)
T cd05583         136 ILLDSEGHVVLTDFGLSKEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-  213 (288)
T ss_pred             eEECCCCCEEEEECcccccccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-
Confidence            57888899999999998765432211 122245788999999876653  67789999999999999999999853211 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK  145 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~  145 (159)
                      .............            ...   ..+......+.+++.+||+.||++|||+.++...|+
T Consensus       214 ~~~~~~~~~~~~~------------~~~---~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~  265 (288)
T cd05583         214 QNSQSEISRRILK------------SKP---PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN  265 (288)
T ss_pred             cchHHHHHHHHHc------------cCC---CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence            1111111111000            000   001123456788999999999999999877765544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=4.5e-18  Score=119.17  Aligned_cols=94  Identities=17%  Similarity=0.140  Sum_probs=62.4

Q ss_pred             cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhh
Q 035782           32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV  111 (159)
Q Consensus        32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (159)
                      .+||+.|+|||++.+..++.++|+||+||+++++++|..||....... .+.. +....    ..+      ..+    .
T Consensus       208 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~~-i~~~~----~~~------~~p----~  271 (377)
T cd05629         208 TVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHE-TYRK-IINWR----ETL------YFP----D  271 (377)
T ss_pred             cCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHH-HHHH-HHccC----Ccc------CCC----C
Confidence            468999999999988888999999999999999999999996532111 0000 10000    000      000    0


Q ss_pred             chHHHHHHHHHHhhhcCCCCCCC---CcHHHHHH
Q 035782          112 KMDCLSSIMHLALDCCMESPDQR---IYMTDAAA  142 (159)
Q Consensus       112 ~~~~~~~~~~l~~~cl~~~p~~R---pt~~~ll~  142 (159)
                      .......+.+++.+|+. +|.+|   +++.+++.
T Consensus       272 ~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~  304 (377)
T cd05629         272 DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS  304 (377)
T ss_pred             CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence            01234567788999997 66665   59998885

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.71  E-value=4.6e-17  Score=109.83  Aligned_cols=139  Identities=18%  Similarity=0.166  Sum_probs=85.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........  ......++..|++||.+.+. .++.++|+|++|++++++++|..||......+
T Consensus       131 i~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~  208 (284)
T cd07836         131 LLINKRGELKLADFGLARAFGIPVN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED  208 (284)
T ss_pred             EEECCCCcEEEeecchhhhhcCCcc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence            5788899999999999976532211  12234567889999987654 46788999999999999999999987543211


Q ss_pred             ccHHHHHHhhc---CCcccchhh-hhcccc-c----hh-hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSL---SGELTQVID-ANLARD-E----QS-FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~---~~~~~~~~~-~~~~~~-~----~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ..........   ...+..+.. +..... +    .. .......+..+.+++.+||+.||.+||++.+++.
T Consensus       209 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         209 -QLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             -HHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence             1111111100   000000000 000000 0    00 0001123566889999999999999999999874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.71  E-value=2.9e-17  Score=107.98  Aligned_cols=123  Identities=28%  Similarity=0.313  Sum_probs=85.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||.+.......   ......++..|++||......++.++|+|++|++++++++|..||...... .
T Consensus       118 i~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-~  193 (244)
T smart00220      118 ILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-L  193 (244)
T ss_pred             eEECCCCcEEEccccceeeecccc---ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-H
Confidence            567888999999999998764322   222345788899999988777888999999999999999999998542111 1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...........           .....    ....+..+.+++.+||..+|++||++.++++
T Consensus       194 ~~~~~~~~~~~-----------~~~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      194 ELFKKIGKPKP-----------PFPPP----EWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHhccCC-----------CCccc----cccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            11111110000           00000    0014457889999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=2.3e-17  Score=113.07  Aligned_cols=73  Identities=29%  Similarity=0.386  Sum_probs=62.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||+|..|++||+|||+++.---.+  ....+.+|||-|+|||++...+|+.++|.|+||+++|||+.|++||.+.
T Consensus       481 vmLd~eGHiKi~DFGmcKEni~~~--~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe  553 (683)
T KOG0696|consen  481 VMLDSEGHIKIADFGMCKENIFDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE  553 (683)
T ss_pred             eEeccCCceEeeecccccccccCC--cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence            588999999999999997532111  1233478999999999999999999999999999999999999999764

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.71  E-value=1.9e-17  Score=124.91  Aligned_cols=124  Identities=23%  Similarity=0.279  Sum_probs=82.4

Q ss_pred             CccCCCCceEEcccccceecC----------------CCCCcccccccccccccccccccCCC---ccccchhhHhHHHH
Q 035782            1 ILLDEDMVAHVSDFGISKLLG----------------DGDDSVTQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVL   61 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~----------------~~~~~~~~~~~~gt~~~~~pe~~~~~---~~~~~~dv~s~g~~   61 (159)
                      |.++.++.|||+|||++....                .+......++.+||--|.|||.+.+.   +|+.+.|+||+|++
T Consensus       728 IFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIV  807 (1351)
T KOG1035|consen  728 IFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIV  807 (1351)
T ss_pred             eEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHH
Confidence            678999999999999998621                01112245667899999999987765   49999999999999


Q ss_pred             HHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           62 LMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        62 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      ++||+.   ||...    +.-...+.        .+.+..+... ..  -.....+.-.+++.++++.||++|||+.|+|
T Consensus       808 lFEM~y---PF~Ts----MERa~iL~--------~LR~g~iP~~-~~--f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL  869 (1351)
T KOG1035|consen  808 LFEMLY---PFGTS----MERASILT--------NLRKGSIPEP-AD--FFDPEHPEEASLIRWLLSHDPSKRPTATELL  869 (1351)
T ss_pred             HHHHhc---cCCch----HHHHHHHH--------hcccCCCCCC-cc--cccccchHHHHHHHHHhcCCCccCCCHHHHh
Confidence            999974   34321    11011111        1111111111 00  0123455667899999999999999999998


Q ss_pred             H
Q 035782          142 A  142 (159)
Q Consensus       142 ~  142 (159)
                      +
T Consensus       870 ~  870 (1351)
T KOG1035|consen  870 N  870 (1351)
T ss_pred             h
Confidence            4

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.70  E-value=4.6e-18  Score=118.46  Aligned_cols=75  Identities=28%  Similarity=0.367  Sum_probs=59.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCc---------------------------------ccccccccccccccccccCCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS---------------------------------VTQTMTMATIGYMAPEYGSEG   47 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------~~~~~~~gt~~~~~pe~~~~~   47 (159)
                      ||++.++.+||+|||++.........                                 ......+||+.|+|||++.+.
T Consensus       132 Ili~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~  211 (360)
T cd05627         132 LLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT  211 (360)
T ss_pred             EEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC
Confidence            67899999999999998754211100                                 001134689999999999888


Q ss_pred             ccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782           48 IVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus        48 ~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      .++.++|+||+||+++++++|..||...
T Consensus       212 ~~~~~~DiwSlGvilyel~tG~~Pf~~~  239 (360)
T cd05627         212 GYNKLCDWWSLGVIMYEMLIGYPPFCSE  239 (360)
T ss_pred             CCCCcceeccccceeeecccCCCCCCCC
Confidence            8999999999999999999999998653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=5.5e-17  Score=108.47  Aligned_cols=123  Identities=20%  Similarity=0.100  Sum_probs=83.9

Q ss_pred             CccCCCCceEEcccccceecCCCCC-cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.++|+|||+++....... ........++..|+|||.+.+..++.++|+||+|++++++++|..||...... 
T Consensus       137 i~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-  215 (264)
T cd06653         137 ILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM-  215 (264)
T ss_pred             EEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH-
Confidence            5678889999999999976532111 11112345788999999988877888999999999999999999998643111 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                         .. +.+.....             .....+......+.+++.+||+ +|..||++.+++.
T Consensus       216 ---~~-~~~~~~~~-------------~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         216 ---AA-IFKIATQP-------------TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             ---HH-HHHHHcCC-------------CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence               00 11100000             0001122445678899999999 5799999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.69  E-value=2.1e-17  Score=114.00  Aligned_cols=127  Identities=19%  Similarity=0.226  Sum_probs=81.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||++.++.+||+|||++........ .......||+.|+|||++.     ...++.++|+||+|++++++++|..||...
T Consensus       133 ili~~~~~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~  211 (332)
T cd05623         133 ILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE  211 (332)
T ss_pred             EEECCCCCEEEeecchheecccCCc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence            5788999999999999876532221 1223356899999999875     235788999999999999999999998643


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC--CCcHHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ--RIYMTDAAAK  143 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~~ll~~  143 (159)
                      ..     ............+ .      ..+   .........+.+++.+|+..++.+  |+++.++++.
T Consensus       212 ~~-----~~~~~~i~~~~~~-~------~~p---~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         212 SL-----VETYGKIMNHKER-F------QFP---AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             CH-----HHHHHHHhCCCcc-c------cCC---CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            21     1111111110000 0      000   001134556778888888655444  6889888754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.69  E-value=1.4e-16  Score=106.25  Aligned_cols=119  Identities=20%  Similarity=0.231  Sum_probs=82.0

Q ss_pred             ccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccccc
Q 035782            2 LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMS   81 (159)
Q Consensus         2 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~   81 (159)
                      +++ ++.+||+|||++........  ......|++.|++||...+..++.++|+||+|++++++++|..||.....    
T Consensus       138 li~-~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~----  210 (260)
T cd08222         138 FLK-NNLLKIGDFGVSRLLMGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF----  210 (260)
T ss_pred             Eee-cCCEeecccCceeecCCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH----
Confidence            444 45699999999877543222  12234578889999988777788889999999999999999999853211    


Q ss_pred             HHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           82 LRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .............              ..+...+..+.+++.+||..+|++||++.++++
T Consensus       211 -~~~~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         211 -LSVVLRIVEGPTP--------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             -HHHHHHHHcCCCC--------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence             1111110000000              011245567889999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.69  E-value=4.4e-17  Score=107.95  Aligned_cols=117  Identities=26%  Similarity=0.244  Sum_probs=82.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++|+|||++........  ......++..|++||...+...+.++|+|++|++++++++|..||.....   
T Consensus       124 i~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---  198 (250)
T cd05123         124 ILLDADGHIKLTDFGLAKELSSEGS--RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---  198 (250)
T ss_pred             EEEcCCCcEEEeecCcceecccCCC--cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---
Confidence            5678889999999999877543221  12334578889999998877788899999999999999999999864321   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTD  139 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~  139 (159)
                        ...........               ...+...+..+.+++.+||..||++||++.+
T Consensus       199 --~~~~~~~~~~~---------------~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         199 --KEIYEKILKDP---------------LRFPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             --HHHHHHHhcCC---------------CCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence              11111100000               0011122456788999999999999999943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.68  E-value=7.9e-17  Score=111.62  Aligned_cols=141  Identities=16%  Similarity=0.147  Sum_probs=86.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++......     .....+++.|++||.+.+ ..++.++|+||+|++++++++|..||.......
T Consensus       149 ill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~  223 (343)
T cd07880         149 LAVNEDCELKILDFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD  223 (343)
T ss_pred             EEEcCCCCEEEeecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            57788999999999998765321     122356788999998765 357888999999999999999999986432111


Q ss_pred             ccHHHHHHhh-----------cCCcccchhhhhccccchh-hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH--HHHH
Q 035782           80 MSLRDWVNKS-----------LSGELTQVIDANLARDEQS-FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA--AKLK  145 (159)
Q Consensus        80 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll--~~l~  145 (159)
                       .........           ................... ..........+.+++.+|++.||++|||+.+++  ..++
T Consensus       224 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~  302 (343)
T cd07880         224 -QLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFE  302 (343)
T ss_pred             -HHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHh
Confidence             111111100           0000000000000000000 000113345688999999999999999999998  4444


Q ss_pred             HH
Q 035782          146 KI  147 (159)
Q Consensus       146 ~~  147 (159)
                      ..
T Consensus       303 ~~  304 (343)
T cd07880         303 EF  304 (343)
T ss_pred             hh
Confidence            43

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=4.6e-17  Score=112.29  Aligned_cols=127  Identities=19%  Similarity=0.223  Sum_probs=79.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||++.++.+||+|||++......... ......||+.|+|||++..     ..++.++|+||+|++++++++|..||...
T Consensus       133 ill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~  211 (331)
T cd05597         133 VLLDKNGHIRLADFGSCLRLLADGTV-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE  211 (331)
T ss_pred             EEECCCCCEEEEECCceeecCCCCCc-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence            57889999999999998765432221 1223468999999998753     34678899999999999999999998643


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCC--CCCCcHHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESP--DQRIYMTDAAAK  143 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p--~~Rpt~~~ll~~  143 (159)
                      ..     .+........  .....  +..      .....+..+.+++.+|+..++  ..|+++.++++.
T Consensus       212 ~~-----~~~~~~i~~~--~~~~~--~~~------~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         212 SL-----VETYGKIMNH--KEHFQ--FPP------DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             CH-----HHHHHHHHcC--CCccc--CCC------ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            21     1111111000  00000  000      001234566777777665444  347899888854

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.67  E-value=3.7e-17  Score=112.75  Aligned_cols=126  Identities=19%  Similarity=0.251  Sum_probs=80.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||++.++.+||+|||++........ .......|++.|+|||++.+     ..++.++|+||+|++++++++|..||...
T Consensus       133 ill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~  211 (331)
T cd05624         133 VLLDMNGHIRLADFGSCLKMNQDGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE  211 (331)
T ss_pred             EEEcCCCCEEEEeccceeeccCCCc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence            5788999999999999987643222 12233568999999998765     35678899999999999999999998643


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC--CCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ--RIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~~ll~  142 (159)
                      ..     ............+ .   .+   +.   ...+.+..+.+++.+|+..++.+  |+++.++++
T Consensus       212 ~~-----~~~~~~i~~~~~~-~---~~---p~---~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~  265 (331)
T cd05624         212 SL-----VETYGKIMNHEER-F---QF---PS---HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK  265 (331)
T ss_pred             CH-----HHHHHHHHcCCCc-c---cC---CC---ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence            21     1111111100000 0   00   00   00123456788898988866544  467887764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.67  E-value=1.5e-16  Score=107.73  Aligned_cols=125  Identities=23%  Similarity=0.258  Sum_probs=82.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||++......... ......|+..|++||.+...  .++.++|+||+|++++++++|..||......
T Consensus       136 il~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~  214 (290)
T cd05613         136 ILLDSNGHVVLTDFGLSKEFHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK  214 (290)
T ss_pred             eEECCCCCEEEeeCccceeccccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc
Confidence            67889999999999999765432211 12234578899999987653  4577899999999999999999998532111


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                       ...........            ...+   +.+......+.+++.+||..||++||     ++.+++.
T Consensus       215 -~~~~~~~~~~~------------~~~~---~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         215 -NSQAEISRRIL------------KSEP---PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             -ccHHHHHHHhh------------ccCC---CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence             11111111100            0000   01123455788999999999999997     6677764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.67  E-value=1e-16  Score=105.66  Aligned_cols=109  Identities=21%  Similarity=0.188  Sum_probs=77.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.++++|||.+.......     ....++..|++||...+..++.++|+||+|++++++++|..++......  
T Consensus       116 il~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~--  188 (237)
T cd05576         116 ILLDDRGHIQLTYFSRWSEVEDSC-----DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG--  188 (237)
T ss_pred             EEEcCCCCEEEecccchhcccccc-----ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh--
Confidence            578889999999999886653221     1234567799999988777888999999999999999998775431100  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT  138 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  138 (159)
                                   .......         ..+......+.+++.+||+.||++||++.
T Consensus       189 -------------~~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         189 -------------INTHTTL---------NIPEWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             -------------ccccccc---------CCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence                         0000000         01113445688899999999999999963

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.66  E-value=7.7e-18  Score=117.93  Aligned_cols=74  Identities=22%  Similarity=0.213  Sum_probs=59.0

Q ss_pred             CccC-CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++ ....+||||||.|.....++..    ...-+..|.|||++.+.+|....|+||.||++||+.+|+..|.+...+
T Consensus       567 iLVNE~k~iLKLCDfGSA~~~~eneit----PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN  641 (752)
T KOG0670|consen  567 ILVNESKNILKLCDFGSASFASENEIT----PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN  641 (752)
T ss_pred             eEeccCcceeeeccCcccccccccccc----HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence            4566 3467899999999877544422    123466799999999999999999999999999999999998875443

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.66  E-value=3.6e-16  Score=106.56  Aligned_cols=92  Identities=18%  Similarity=0.256  Sum_probs=68.3

Q ss_pred             cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhh
Q 035782           32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV  111 (159)
Q Consensus        32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (159)
                      ++||..|+|||++.+.+++.++|.|+||+++|||+.|..||.+.... ..            +..++.+.+     .++.
T Consensus       295 FVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~-~T------------l~NIv~~~l-----~Fp~  356 (459)
T KOG0610|consen  295 FVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNK-ET------------LRNIVGQPL-----KFPE  356 (459)
T ss_pred             cccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCch-hh------------HHHHhcCCC-----cCCC
Confidence            56999999999999999999999999999999999999999763221 11            112222111     1111


Q ss_pred             chHHHHHHHHHHhhhcCCCCCCCCc----HHHHH
Q 035782          112 KMDCLSSIMHLALDCCMESPDQRIY----MTDAA  141 (159)
Q Consensus       112 ~~~~~~~~~~l~~~cl~~~p~~Rpt----~~~ll  141 (159)
                      .......+.+|+++.|..||.+|.-    +.||.
T Consensus       357 ~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK  390 (459)
T KOG0610|consen  357 EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK  390 (459)
T ss_pred             CCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence            1245577899999999999999988    66664

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.65  E-value=2.8e-16  Score=105.38  Aligned_cols=120  Identities=20%  Similarity=0.272  Sum_probs=83.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc--cc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF--IG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~--~~   78 (159)
                      +|+|..|++||+|+|+++.-...+  ...++.+|||-|+|||++.+..|..++|.|++|++++||..|+.||.-..  +.
T Consensus       382 vlldaeghikltdygmcke~l~~g--d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~  459 (593)
T KOG0695|consen  382 VLLDAEGHIKLTDYGMCKEGLGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNP  459 (593)
T ss_pred             eEEccCCceeecccchhhcCCCCC--cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCc
Confidence            588999999999999997643222  23456899999999999999999999999999999999999999997433  22


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY  136 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  136 (159)
                      +.....+..+.       ++.+.+..       |....-....+++.-++.||.+|.-
T Consensus       460 d~ntedylfqv-------ilekqiri-------prslsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  460 DMNTEDYLFQV-------ILEKQIRI-------PRSLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             ccchhHHHHHH-------Hhhhcccc-------cceeehhhHHHHHHhhcCCcHHhcC
Confidence            23332322211       11111111       0112223455778888899988854

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=3.5e-16  Score=108.71  Aligned_cols=132  Identities=14%  Similarity=0.079  Sum_probs=86.1

Q ss_pred             CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc----ccc
Q 035782            6 DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG----EMS   81 (159)
Q Consensus         6 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~----~~~   81 (159)
                      +-.+||+|||.|+.+..     +.+.-+.|..|++||++.+.+|+..+|+||++|+.||+++|-..|+--...    +..
T Consensus       390 di~vKIaDlGNACW~~k-----hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDED  464 (590)
T KOG1290|consen  390 DIRVKIADLGNACWVHK-----HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDED  464 (590)
T ss_pred             ceeEEEeeccchhhhhh-----hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHH
Confidence            35789999999988632     344467889999999999999999999999999999999998777532211    111


Q ss_pred             -H---HHHHHhhc------CCcccchhhh--------hccccch-h-----hhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           82 -L---RDWVNKSL------SGELTQVIDA--------NLARDEQ-S-----FFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        82 -~---~~~~~~~~------~~~~~~~~~~--------~~~~~~~-~-----~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                       +   .+......      ....++++..        .++..+- .     -.-+.+...++.+++.-||+.+|.+|||+
T Consensus       465 HiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA  544 (590)
T KOG1290|consen  465 HIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTA  544 (590)
T ss_pred             HHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccH
Confidence             1   11100000      0001111110        0111100 0     01134567789999999999999999999


Q ss_pred             HHHHH
Q 035782          138 TDAAA  142 (159)
Q Consensus       138 ~~ll~  142 (159)
                      .+.++
T Consensus       545 ~~cl~  549 (590)
T KOG1290|consen  545 AQCLK  549 (590)
T ss_pred             HHHhc
Confidence            99883

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.63  E-value=1.6e-16  Score=112.60  Aligned_cols=119  Identities=22%  Similarity=0.274  Sum_probs=87.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.+..+||+|||++.++..+   ......+|++.|.|||+..+..| .+.+|+|++|+++|.+++|..||.+...  
T Consensus       186 ilL~~~mnikIaDfgfS~~~~~~---~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l--  260 (596)
T KOG0586|consen  186 ILLDENMNIKIADFGFSTFFDYG---LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL--  260 (596)
T ss_pred             cccccccceeeeccccceeeccc---ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc--
Confidence            67888889999999999988532   23455789999999999998876 5779999999999999999999975322  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                                     +.+..+-+.+..+   .+.-....+-+++++++..+|++|+++.++-+
T Consensus       261 ---------------k~Lr~rvl~gk~r---Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  261 ---------------KELRPRVLRGKYR---IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             ---------------ccccchheeeeec---ccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence                           1111111111111   01123345777899999999999999988763

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.62  E-value=6e-17  Score=118.32  Aligned_cols=117  Identities=25%  Similarity=0.325  Sum_probs=82.3

Q ss_pred             CCceEEcccccceecCCCCC-cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhc-CCCCcccccccccHH
Q 035782            6 DMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTR-KKPTDEMFIGEMSLR   83 (159)
Q Consensus         6 ~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~-~~p~~~~~~~~~~~~   83 (159)
                      ...++|+|||+|+.+..+.. ..+..+..||-+|+|||.+....-+.++|++|+||++|.+++| .+||......+.+. 
T Consensus       647 ~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NI-  725 (903)
T KOG1027|consen  647 TLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANI-  725 (903)
T ss_pred             ceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhh-
Confidence            35789999999998764433 2334567799999999999888778899999999999999886 78886532211100 


Q ss_pred             HHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           84 DWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                            + .....+..  +.+.       .++  ...+|+.+|++.+|..||++.+|+
T Consensus       726 ------l-~~~~~L~~--L~~~-------~d~--eA~dLI~~ml~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  726 ------L-TGNYTLVH--LEPL-------PDC--EAKDLISRMLNPDPQLRPSATDVL  765 (903)
T ss_pred             ------h-cCccceee--eccC-------chH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence                  0 00000000  0010       122  678899999999999999999998

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=3.1e-16  Score=102.46  Aligned_cols=140  Identities=21%  Similarity=0.242  Sum_probs=87.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      +|++.|..+||||||+++.... +...+.+..+-|-.|.|||.+.+. .|+.+.||||.||++.|++.++..|+...+- 
T Consensus       187 LLVNSNCvLKICDFGLARvee~-d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi-  264 (449)
T KOG0664|consen  187 LLVNSNCILKICDFGLARTWDQ-RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI-  264 (449)
T ss_pred             EEeccCceEEecccccccccch-hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH-
Confidence            3678888999999999998643 333344455667889999999887 6899999999999999999988888753321 


Q ss_pred             ccHHHHHHhhcC------------Ccccchhhhhcc-c---cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           80 MSLRDWVNKSLS------------GELTQVIDANLA-R---DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        80 ~~~~~~~~~~~~------------~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                       ...+.+-....            +....++....+ +   ..+....+.+.-.....+...++..||++|.+..+.+..
T Consensus       265 -qQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~  343 (449)
T KOG0664|consen  265 -EQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH  343 (449)
T ss_pred             -HHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence             11111111110            111111111111 0   011111122333456677888999999999998877643

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.61  E-value=3.3e-15  Score=92.21  Aligned_cols=139  Identities=17%  Similarity=0.122  Sum_probs=87.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc-cccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI-VSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      +||+.+|.+|++|||+++.++-...  ..+..+-|.+|.+|.++.+.+ |+.+.|+||.||++.|+.. |.+.|.+....
T Consensus       132 llin~ngelkladfglarafgipvr--cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd  209 (292)
T KOG0662|consen  132 LLINRNGELKLADFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  209 (292)
T ss_pred             EEeccCCcEEecccchhhhcCCceE--eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH
Confidence            4789999999999999998864332  234455789999999988875 7899999999999999986 55556554322


Q ss_pred             cccHHHHHHhhc---CCcc---cchhhhhccccchhhhhch----HHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSL---SGEL---TQVIDANLARDEQSFFVKM----DCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      + .+...++..-   ...|   ..+-+...-+..+......    .....-.+++.+.+.-+|.+|+++++.++
T Consensus       210 d-qlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  210 D-QLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             H-HHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence            2 2222221111   1111   1121211111111111111    22234567888888889999999998764

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.60  E-value=2.1e-15  Score=99.98  Aligned_cols=135  Identities=18%  Similarity=0.145  Sum_probs=86.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |++..+..+||.|||+++.-...   ..-+-.+.+..|.|||+..+..+...+|+||.||++.||+.|...|.+.    .
T Consensus       149 ivv~~~~~lKi~dfg~ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~----d  221 (369)
T KOG0665|consen  149 IVVNSDCTLKILDFGLARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK----D  221 (369)
T ss_pred             ceecchhheeeccchhhcccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc----h
Confidence            57788899999999999764211   2333356788899999999988999999999999999999999877632    2


Q ss_pred             cHHHHHHhh--cCCcccchhhhh-------ccc------------cch-----hhhhchHHHHHHHHHHhhhcCCCCCCC
Q 035782           81 SLRDWVNKS--LSGELTQVIDAN-------LAR------------DEQ-----SFFVKMDCLSSIMHLALDCCMESPDQR  134 (159)
Q Consensus        81 ~~~~~~~~~--~~~~~~~~~~~~-------~~~------------~~~-----~~~~~~~~~~~~~~l~~~cl~~~p~~R  134 (159)
                      ...+|....  .......+.++.       +..            .+.     ......-......+++.+||..||++|
T Consensus       222 ~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~R  301 (369)
T KOG0665|consen  222 HIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKR  301 (369)
T ss_pred             HHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhc
Confidence            222221100  000000000000       000            000     001111223457889999999999999


Q ss_pred             CcHHHHHH
Q 035782          135 IYMTDAAA  142 (159)
Q Consensus       135 pt~~~ll~  142 (159)
                      .++.++|.
T Consensus       302 isv~daL~  309 (369)
T KOG0665|consen  302 ISVDDALR  309 (369)
T ss_pred             ccHHHHhc
Confidence            99999884

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.60  E-value=7.5e-16  Score=113.22  Aligned_cols=122  Identities=19%  Similarity=0.260  Sum_probs=89.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||++.++.|||.|||++.....  ....+.+.+|||.|||||++.     ...|+..+|+||+|++-.|+.-|.+|+..+
T Consensus       154 iLLT~e~~VKLvDFGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm  231 (953)
T KOG0587|consen  154 VLLTENAEVKLVDFGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM  231 (953)
T ss_pred             EEEeccCcEEEeeeeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc
Confidence            6889999999999999987642  223456678999999999753     224778899999999999999999997543


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccc-hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDE-QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      -+.                +.++.  +...| ...-.+.....++-+++..|+..|-.+||+..++++
T Consensus       232 HPm----------------raLF~--IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  232 HPM----------------RALFL--IPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             chh----------------hhhcc--CCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            211                11111  11111 112224567778999999999999999999999883

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.60  E-value=7.4e-16  Score=96.76  Aligned_cols=73  Identities=34%  Similarity=0.444  Sum_probs=58.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC----CccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE----GIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      |||+..|+||+||||.+..+.+.   ...+.-.|-..|+|||.+..    ..|+.++||||+|+++.|+..++.||....
T Consensus       180 iLIn~~GqVKiCDFGIsG~L~dS---iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~  256 (282)
T KOG0984|consen  180 ILINYDGQVKICDFGISGYLVDS---IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG  256 (282)
T ss_pred             EEEccCCcEEEcccccceeehhh---hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence            68999999999999999876432   22232346678999997543    378999999999999999999999987543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.59  E-value=7.5e-16  Score=112.74  Aligned_cols=131  Identities=15%  Similarity=0.178  Sum_probs=93.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCc--ccccccccccccccccccCCCcccc-chhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS--VTQTMTMATIGYMAPEYGSEGIVST-KCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~~~~pe~~~~~~~~~-~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      +++..+|.+||+|||.+..+....+.  ......+|+.+|+|||++.+..|.+ ..||||.|+++..|..|+.||.....
T Consensus       451 ll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~  530 (601)
T KOG0590|consen  451 LLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKK  530 (601)
T ss_pred             EEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccc
Confidence            46778899999999999877543333  4455678999999999999888754 59999999999999999999987655


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .+..+..   ... .......       ..........+.....++.++++.||.+|.|+++|++
T Consensus       531 ~~~~~~~---~~~-~~~~~~~-------~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  531 SDNSFKT---NNY-SDQRNIF-------EGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             cccchhh---hcc-ccccccc-------cChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            4443200   000 0000000       0011112245667888999999999999999999984

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.57  E-value=6.3e-17  Score=113.89  Aligned_cols=113  Identities=15%  Similarity=0.197  Sum_probs=77.8

Q ss_pred             ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHH
Q 035782            8 VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVN   87 (159)
Q Consensus         8 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~   87 (159)
                      ++||||||+|++++..   ..+..++|||.|+|||++.+..|+.+.|+||.|+++|..++|..||.....-.........
T Consensus       705 QvKlCDFGfARiIgEk---sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaF  781 (888)
T KOG4236|consen  705 QVKLCDFGFARIIGEK---SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAF  781 (888)
T ss_pred             ceeeccccceeecchh---hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccc
Confidence            7899999999998532   2344578999999999999999999999999999999999999999753221111111111


Q ss_pred             hhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           88 KSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      .+.+..|.                  +......+++...++..-.+|-|....+
T Consensus       782 MyPp~PW~------------------eis~~AidlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  782 MYPPNPWS------------------EISPEAIDLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             ccCCCchh------------------hcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence            11111121                  3445566677777777777777765443

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.51  E-value=6.3e-15  Score=111.07  Aligned_cols=73  Identities=26%  Similarity=0.470  Sum_probs=61.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      ||+|..|++||+|||.|-.+...+ .......+|||-|++||++..     +.|+...|.||+|+++|||+.|..||..
T Consensus       206 vLld~~GHikLADFGsClkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa  283 (1317)
T KOG0612|consen  206 VLLDKSGHIKLADFGSCLKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA  283 (1317)
T ss_pred             eEecccCcEeeccchhHHhcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence            689999999999999998875333 334455789999999998653     3588999999999999999999999975

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.50  E-value=8.4e-15  Score=101.59  Aligned_cols=122  Identities=25%  Similarity=0.324  Sum_probs=80.7

Q ss_pred             CCceEEcccccceecCCCCCccc-----ccccccccccccccccCCC----ccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            6 DMVAHVSDFGISKLLGDGDDSVT-----QTMTMATIGYMAPEYGSEG----IVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         6 ~~~~kl~Dfg~~~~~~~~~~~~~-----~~~~~gt~~~~~pe~~~~~----~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      .|.+||+|||+++++.+......     .+...||.||++||.+.-.    +.+.++||||.|+++|..+.|+.||....
T Consensus       609 cGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnq  688 (775)
T KOG1151|consen  609 CGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ  688 (775)
T ss_pred             cceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCch
Confidence            47889999999999864433221     2345699999999965432    57789999999999999999999986532


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      ..    ......      ..+    +....-.++..+........++++||.+.-.+|....++-
T Consensus       689 sQ----QdILqe------NTI----lkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  689 SQ----QDILQE------NTI----LKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             hH----HHHHhh------hch----hcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            11    111110      001    1111112222234455677899999999999998876654

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.49  E-value=4e-14  Score=101.93  Aligned_cols=80  Identities=28%  Similarity=0.370  Sum_probs=63.4

Q ss_pred             CccCCCCceEEcccccceecC--CCCCcc--------------------------------------ccccccccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLG--DGDDSV--------------------------------------TQTMTMATIGYMA   40 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~--~~~~~~--------------------------------------~~~~~~gt~~~~~   40 (159)
                      ||||.+|++||+|||+|.-++  ++..+.                                      ..+..+||+-|+|
T Consensus       760 ILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyia  839 (1034)
T KOG0608|consen  760 ILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIA  839 (1034)
T ss_pred             eEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccC
Confidence            799999999999999997542  110000                                      0112459999999


Q ss_pred             ccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782           41 PEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus        41 pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++...+++...|.|+.|++++||+.|+.||....+++.
T Consensus       840 pevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~t  879 (1034)
T KOG0608|consen  840 PEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGET  879 (1034)
T ss_pred             hHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcc
Confidence            9999999999999999999999999999999987665554

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.46  E-value=1.6e-13  Score=98.88  Aligned_cols=134  Identities=19%  Similarity=0.195  Sum_probs=77.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc----------------------cccchhhHhH
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI----------------------VSTKCDVYSY   58 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~----------------------~~~~~dv~s~   58 (159)
                      ||++.++.+||+|||++..+...... ......+++.|++||.+....                      .....|+||+
T Consensus       340 ILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSl  418 (507)
T PLN03224        340 LLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTA  418 (507)
T ss_pred             EEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhH
Confidence            57888899999999999765332211 111223578999999764321                      1124799999


Q ss_pred             HHHHHHHHhcCC-CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCC---CCC
Q 035782           59 GVLLMETFTRKK-PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESP---DQR  134 (159)
Q Consensus        59 g~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p---~~R  134 (159)
                      |+++++|+.+.. |+............+     ........  ...................++++.+++..+|   .+|
T Consensus       419 Gvil~em~~~~l~p~~~~~~f~~~~~~~-----~~~~~~~r--~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~R  491 (507)
T PLN03224        419 GVLLMQMCVPELRPVANIRLFNTELRQY-----DNDLNRWR--MYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGR  491 (507)
T ss_pred             HHHHHHHHhCCCCCccchhhhhhHHhhc-----cchHHHHH--hhcccCCCcccccccChHHHHHHHHHhccCCCCcccC
Confidence            999999999874 654321111111100     00000000  0000011111122345678999999999766   689


Q ss_pred             CcHHHHHH
Q 035782          135 IYMTDAAA  142 (159)
Q Consensus       135 pt~~~ll~  142 (159)
                      +|+.|++.
T Consensus       492 lSa~eaL~  499 (507)
T PLN03224        492 LSVGQALS  499 (507)
T ss_pred             CCHHHHhC
Confidence            99999985

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.44  E-value=2.1e-13  Score=96.70  Aligned_cols=138  Identities=22%  Similarity=0.339  Sum_probs=89.8

Q ss_pred             ccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC---c----cccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            2 LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG---I----VSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         2 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~---~----~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      ++|.++.+|++|||+.............+...-...|.|||.+...   .    .+.+.|+||||++++|++.++.||..
T Consensus        81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~  160 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL  160 (484)
T ss_pred             eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence            5788899999999998776321111111112234469999987653   1    35679999999999999999999986


Q ss_pred             cccccc--cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           75 MFIGEM--SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        75 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      ......  .....+..    .....+.+.+...       .+..+.+..++..||..+|.+||++.++-..++.+...
T Consensus       161 ~~~~~~~~eii~~~~~----~~~~~~rP~i~~~-------~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  161 RNLVEDPDEIILRVKK----GGSNPFRPSIELL-------NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             ccccCChHHHHHHHHh----cCCCCcCcchhhh-------hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence            443222  11122222    1111122212111       13344789999999999999999999999888887763

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.39  E-value=4.1e-13  Score=88.09  Aligned_cols=97  Identities=21%  Similarity=0.216  Sum_probs=70.7

Q ss_pred             cccccccccccCCCc---cccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhh
Q 035782           34 ATIGYMAPEYGSEGI---VSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFF  110 (159)
Q Consensus        34 gt~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (159)
                      -+|.|++||.+...+   .-.++|+|||++++||+.++..||....+.+....-..     ..++..             
T Consensus       348 y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial-----eglrv~-------------  409 (448)
T KOG0195|consen  348 YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL-----EGLRVH-------------  409 (448)
T ss_pred             cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh-----cccccc-------------
Confidence            367899999887654   23579999999999999999999987544332211100     011111             


Q ss_pred             hchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782          111 VKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus       111 ~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                      .|+.......++|.-|++.||.+||.+..++.+|++++
T Consensus       410 ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  410 IPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             CCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            12355667888999999999999999999999998864

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.38  E-value=2e-13  Score=98.50  Aligned_cols=124  Identities=19%  Similarity=0.244  Sum_probs=85.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCccccccccccccccccccc---CCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYG---SEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~---~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||+.+.|.+|++|||.+..+.  .....+..++||+.|+|||+.   ....|+...|+|+.|+.--|+...++|--    
T Consensus       143 illtd~gDvklaDfgvsaqit--ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplf----  216 (829)
T KOG0576|consen  143 ILLTDEGDVKLADFGVSAQIT--ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLF----  216 (829)
T ss_pred             eeecccCceeecccCchhhhh--hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccc----
Confidence            688899999999999987653  233344557899999999963   44578999999999998888877666521    


Q ss_pred             ccccH-HHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSL-RDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       +... +...-...+ .          ..+..+..+....+.+.++++.|+-.+|.+||+++.++.
T Consensus       217 -dlhpmr~l~LmTkS-~----------~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  217 -DLHPMRALFLMTKS-G----------FQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             -ccchHHHHHHhhcc-C----------CCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence             1111 111111110 0          111112223456778999999999999999999998774

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.38  E-value=1.1e-12  Score=84.31  Aligned_cols=90  Identities=31%  Similarity=0.441  Sum_probs=71.3

Q ss_pred             CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      |+++. ++.++|+|||.+........  ......+...|.+||..... ..+.+.|+|++|++++++             
T Consensus       123 i~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------  187 (215)
T cd00180         123 ILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------  187 (215)
T ss_pred             EEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------
Confidence            45666 78999999999987643221  11223467789999988776 677889999999999987             


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                                                            ..+.+++..|+..+|++||++.++++.
T Consensus       188 --------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 --------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             --------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence                                                  357889999999999999999998864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.36  E-value=3.3e-13  Score=94.83  Aligned_cols=111  Identities=22%  Similarity=0.322  Sum_probs=74.7

Q ss_pred             CCCCceEEcccccceecCCCC----CcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            4 DEDMVAHVSDFGISKLLGDGD----DSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         4 ~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      ..+..+||+|||+.....+..    .....+...||.+|++||.+.+..|+.++|+|++|++++|++. -...++.+.. 
T Consensus       390 ~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t-  468 (516)
T KOG1033|consen  390 SDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIAT-  468 (516)
T ss_pred             ccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHh-
Confidence            345679999999988765444    2334556679999999999999999999999999999999987 3333322110 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY  136 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  136 (159)
                                     ...+.+..+.+.      .....+.-..++..++...|.+||+
T Consensus       469 ---------------~~d~r~g~ip~~------~~~d~p~e~~ll~~lls~~p~~RP~  505 (516)
T KOG1033|consen  469 ---------------LTDIRDGIIPPE------FLQDYPEEYTLLQQLLSPSPEERPS  505 (516)
T ss_pred             ---------------hhhhhcCCCChH------HhhcCcHHHHHHHHhcCCCcccCch
Confidence                           011111111110      0122234566889999999999994

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.35  E-value=1.7e-12  Score=94.12  Aligned_cols=138  Identities=17%  Similarity=0.129  Sum_probs=83.6

Q ss_pred             eEEcccccceecCCCCCcccccccccccccccccccC-CCccccchhhHhHHHHHHHHHhcCCCCcccccccc-cHHHHH
Q 035782            9 AHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM-SLRDWV   86 (159)
Q Consensus         9 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~-~~~~~~   86 (159)
                      -||+|||.|+...++.   .....+||..|++||.+. ...|+..+|.||||+++|+.++|..||-......- ....|.
T Consensus       163 yKLtDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~  239 (732)
T KOG4250|consen  163 YKLTDFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWH  239 (732)
T ss_pred             EeeecccccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhh
Confidence            4999999999886444   455678999999999888 46889999999999999999999999864332211 011111


Q ss_pred             Hhh-cCCcccchhhhhcc---ccchhhhhch----HHHHHHHHHHhhhcCCCCCCCC--cHHHHHHHHHHHHH
Q 035782           87 NKS-LSGELTQVIDANLA---RDEQSFFVKM----DCLSSIMHLALDCCMESPDQRI--YMTDAAAKLKKIKE  149 (159)
Q Consensus        87 ~~~-~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~l~~~cl~~~p~~Rp--t~~~ll~~l~~~~~  149 (159)
                      ... .+........+..+   .....++.+.    .....+-+++..++..+|.+|-  ...+..+.+..|++
T Consensus       240 ~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~  312 (732)
T KOG4250|consen  240 IITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN  312 (732)
T ss_pred             hhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence            100 01111111111111   0111112221    2334455677778888888887  55566666665554

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.31  E-value=4.8e-12  Score=81.13  Aligned_cols=137  Identities=17%  Similarity=0.214  Sum_probs=86.6

Q ss_pred             ccC-CCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            2 LLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         2 li~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      +|| ..-.++|+|+|+|.++-.+.+.+.   .+.+..|--||.+... .|..+.|+|||||++..|+..+.||-.-..+-
T Consensus       164 mIdh~~rkLrlIDWGLAEFYHp~~eYnV---RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~  240 (338)
T KOG0668|consen  164 MIDHELRKLRLIDWGLAEFYHPGKEYNV---RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY  240 (338)
T ss_pred             eechhhceeeeeecchHhhcCCCceeee---eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH
Confidence            455 335789999999998865555443   4577888999987766 57889999999999999999999975322211


Q ss_pred             c------------cHHHHHHhh---cCCcccchhhhhccccchhhhh---chHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           80 M------------SLRDWVNKS---LSGELTQVIDANLARDEQSFFV---KMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        80 ~------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      .            .+..+..++   ..+....++.....+.-..+..   ..-..++..+++.+.+..|..+|+|+.|+.
T Consensus       241 DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam  320 (338)
T KOG0668|consen  241 DQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAM  320 (338)
T ss_pred             HHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHh
Confidence            1            111222222   2222222222111111111100   111236788999999999999999999987

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.31  E-value=2.5e-12  Score=85.99  Aligned_cols=132  Identities=14%  Similarity=0.187  Sum_probs=81.1

Q ss_pred             ceEEcccccceecCCCCCccc-----ccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            8 VAHVSDFGISKLLGDGDDSVT-----QTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         8 ~~kl~Dfg~~~~~~~~~~~~~-----~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      -+|||||.+..-+.-+.....     ..+.+|+-.|||||++.     ...|..+.|.||+|+++|-|++|.+||.+.-.
T Consensus       217 PvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg  296 (463)
T KOG0607|consen  217 PVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCG  296 (463)
T ss_pred             ceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccC
Confidence            469999988754322222111     23467888899999642     23588999999999999999999999987655


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhh--hchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFF--VKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .+..+.+   ...=..+++.+=..++...+.++  ....+.....+++...+..|+.+|.++.++++
T Consensus       297 ~dCGWdr---Ge~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  297 ADCGWDR---GEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             CcCCccC---CCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            4432110   00000011111011111111111  12345667778888889999999999998875

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.16  E-value=6.9e-12  Score=89.57  Aligned_cols=69  Identities=22%  Similarity=0.396  Sum_probs=58.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTD   73 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~   73 (159)
                      ++++.+|.+||+|||.+....++.    ...++||..|.|||++.+.+| ....|+|++|+++|.++....||.
T Consensus       701 vivd~~g~~klidfgsaa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  701 VIVDSNGFVKLIDFGSAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             EEEecCCeEEEeeccchhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            467899999999999997764333    344789999999999999987 567999999999999988888874

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.15  E-value=1.2e-11  Score=93.51  Aligned_cols=117  Identities=18%  Similarity=0.131  Sum_probs=77.5

Q ss_pred             ccCCCCceEEcccccceecCCCCCcc-------------cccccccccccccccccCCCccccchhhHhHHHHHHHHHhc
Q 035782            2 LLDEDMVAHVSDFGISKLLGDGDDSV-------------TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTR   68 (159)
Q Consensus         2 li~~~~~~kl~Dfg~~~~~~~~~~~~-------------~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~   68 (159)
                      +|..-|+.|++|||+++........+             .-..++||+.|+|||+..-.+|...+|.|++|+++|+.+-|
T Consensus       175 lIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVg  254 (1205)
T KOG0606|consen  175 LITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVG  254 (1205)
T ss_pred             eeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHhee
Confidence            56677899999999987643211111             11236899999999999999999999999999999999999


Q ss_pred             CCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC
Q 035782           69 KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI  135 (159)
Q Consensus        69 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  135 (159)
                      ..||.+..+++. +...+...+            ....    .....+.+...++...|+.+|..|.
T Consensus       255 cvpffGdtpeel-fg~visd~i------------~wpE----~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  255 CVPFFGDTPEEL-FGQVISDDI------------EWPE----EDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             eeeccCCCHHHH-Hhhhhhhhc------------cccc----cCcCCCHHHHHHHHHHHHhChHhhc
Confidence            999865422211 111111111            0000    0112344667778888888888884

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.10  E-value=2.2e-10  Score=74.59  Aligned_cols=73  Identities=26%  Similarity=0.365  Sum_probs=56.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCccccccccccccccccccc-CCCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYG-SEGIVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~-~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      |+++.++.++|+|||.+......... ......++..|++||.. ....++.++|+|++|++++++++|+.||..
T Consensus       129 i~v~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      129 ILLGMDGLVKLADFGLARFIHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             EEEcCCCCEEEeeCceeeEecCcccc-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            46777899999999999876433200 12224567789999987 555677799999999999999999999854

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.06  E-value=2.2e-10  Score=76.87  Aligned_cols=105  Identities=18%  Similarity=0.211  Sum_probs=62.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC--------CccccchhhHhHHHHHHHHHhcCCCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE--------GIVSTKCDVYSYGVLLMETFTRKKPT   72 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~--------~~~~~~~dv~s~g~~~~~~~~~~~p~   72 (159)
                      ++++.+|.+.|+||+.....+  ... ..  ...+..|.+||....        ..++.+.|.|++|+++|.++++..||
T Consensus       176 fll~~~G~v~Lg~F~~~~r~g--~~~-~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf  250 (288)
T PF14531_consen  176 FLLDQDGGVFLGDFSSLVRAG--TRY-RC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPF  250 (288)
T ss_dssp             EEE-TTS-EEE--GGGEEETT--EEE-EG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-ST
T ss_pred             EEEcCCCCEEEcChHHHeecC--cee-ec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCC
Confidence            468899999999998876642  111 11  223467889985422        25778899999999999999999998


Q ss_pred             cccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCC
Q 035782           73 DEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQR  134 (159)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  134 (159)
                      ...........                 ....       ..+.++.+..|+..+|+.||.+|
T Consensus       251 ~~~~~~~~~~~-----------------~f~~-------C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  251 GLSSPEADPEW-----------------DFSR-------CRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             CCCGGGSTSGG-----------------GGTT-------SS---HHHHHHHHHHT-SSGGGS
T ss_pred             CCCCccccccc-----------------cchh-------cCCcCHHHHHHHHHHccCCcccC
Confidence            75432111000                 0111       11567789999999999999988

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.04  E-value=2e-10  Score=75.52  Aligned_cols=118  Identities=17%  Similarity=0.244  Sum_probs=74.0

Q ss_pred             CceEEcccccceecCCCCCccccccccccccccccccc---CCC--ccccchhhHhHHHHHHHHHhcCCCCccccccccc
Q 035782            7 MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYG---SEG--IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMS   81 (159)
Q Consensus         7 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~---~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~   81 (159)
                      ..+||||||+.+..+.....     .--+..|.+||.+   ..+  ..++..|+|.||++++..++|..||+.....+..
T Consensus       160 ~rvKlcDFG~t~k~g~tV~~-----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~  234 (378)
T KOG1345|consen  160 YRVKLCDFGLTRKVGTTVKY-----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKP  234 (378)
T ss_pred             cEEEeeecccccccCceehh-----hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCch
Confidence            47999999998876422111     1123357888853   233  3567899999999999999999999977667766


Q ss_pred             HHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           82 LRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      +-+|..=......      .+....+      --.+.++.+.++-+..++.+|-.+.++.
T Consensus       235 Y~~~~~w~~rk~~------~~P~~F~------~fs~~a~r~Fkk~lt~~~~drcki~~~k  282 (378)
T KOG1345|consen  235 YWEWEQWLKRKNP------ALPKKFN------PFSEKALRLFKKSLTPRFKDRCKIWTAK  282 (378)
T ss_pred             HHHHHHHhcccCc------cCchhhc------ccCHHHHHHHHHhcCCcccccchhHHHH
Confidence            6655432111000      0111111      1134567778888888998885444443

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.97  E-value=2e-10  Score=79.00  Aligned_cols=110  Identities=22%  Similarity=0.272  Sum_probs=68.0

Q ss_pred             ccccccccccccCCCc-cccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHH--------Hhh--cCCc---cc---
Q 035782           33 MATIGYMAPEYGSEGI-VSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWV--------NKS--LSGE---LT---   95 (159)
Q Consensus        33 ~gt~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~--------~~~--~~~~---~~---   95 (159)
                      .||++|.|||++...+ -+++.|+||.|+++..++++..||-....+-..+.+..        ++.  ..+.   ++   
T Consensus       238 AGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn  317 (418)
T KOG1167|consen  238 AGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSN  317 (418)
T ss_pred             CCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeecccc
Confidence            4999999999987664 57889999999999999999999865444332222110        000  0000   00   


Q ss_pred             --chhh----------hhccc-cc---hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           96 --QVID----------ANLAR-DE---QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        96 --~~~~----------~~~~~-~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        .+.+          ..+.+ +.   .........+..+++++.+|+..||.+|.|++++|+
T Consensus       318 ~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk  380 (418)
T KOG1167|consen  318 IPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK  380 (418)
T ss_pred             ccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence              0000          00001 00   011111122347899999999999999999999984

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.95  E-value=5e-10  Score=80.67  Aligned_cols=66  Identities=30%  Similarity=0.336  Sum_probs=56.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      |+++.+|++|+.|||+++.....+.      .+||.-|+|||+..  .+..+.|.||||++.+++++|..||..
T Consensus       128 illd~~Ghi~~tdfglske~v~~~~------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  128 VLLLLEGHIKLTDFGLSKEAVKEKI------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             eeecccCccccCCchhhhHhHhhhh------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence            6788999999999999987542221      27899999999988  457889999999999999999999875

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.84  E-value=3.6e-08  Score=67.28  Aligned_cols=134  Identities=25%  Similarity=0.307  Sum_probs=85.3

Q ss_pred             CccCCCC-ceEEcccccceecCCCCCcc----cccccccccccccccccCC---CccccchhhHhHHHHHHHHHhcCCCC
Q 035782            1 ILLDEDM-VAHVSDFGISKLLGDGDDSV----TQTMTMATIGYMAPEYGSE---GIVSTKCDVYSYGVLLMETFTRKKPT   72 (159)
Q Consensus         1 ili~~~~-~~kl~Dfg~~~~~~~~~~~~----~~~~~~gt~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~~~~p~   72 (159)
                      |+++..+ .++++|||.++.+.......    ......|+..|++||...+   .......|+|++|+++++++.+..||
T Consensus       132 il~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~  211 (384)
T COG0515         132 ILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPF  211 (384)
T ss_pred             eeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence            4667667 69999999998654332221    2345679999999998877   46788899999999999999999986


Q ss_pred             cccccc--cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           73 DEMFIG--EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        73 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      ......  .......+..........    .......     ......+.+++..|+..+|..|.+..+....
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         212 EGEKNSSATSQTLKIILELPTPSLAS----PLSPSNP-----ELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             CCCCccccHHHHHHHHHhcCCccccc----ccCcccc-----chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            543321  111111111111110000    0000000     1233567889999999999999998876654

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.72  E-value=2.4e-08  Score=76.78  Aligned_cols=126  Identities=19%  Similarity=0.201  Sum_probs=72.6

Q ss_pred             CccCCCCceEEcccccceec-CCCCC----cccccccccccccccccccCC----------Cc-cccchhhHhHHHHHHH
Q 035782            1 ILLDEDMVAHVSDFGISKLL-GDGDD----SVTQTMTMATIGYMAPEYGSE----------GI-VSTKCDVYSYGVLLME   64 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~-~~~~~----~~~~~~~~gt~~~~~pe~~~~----------~~-~~~~~dv~s~g~~~~~   64 (159)
                      |||..=+.+-|+||..-+.. ...+.    ..-..+...-..|+|||.+..          .+ .+++.|+||.||++.|
T Consensus       151 ILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaE  230 (1431)
T KOG1240|consen  151 ILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAE  230 (1431)
T ss_pred             EEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHH
Confidence            45555566778888765432 11111    111111111235999996433          12 5678999999999999


Q ss_pred             HHh-cCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           65 TFT-RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        65 ~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      ++. |+++|.-..     +..+.... ....+.++.+.             +...+++++..|++.||++|.++++.|+.
T Consensus       231 Lf~Eg~PlF~LSQ-----L~aYr~~~-~~~~e~~Le~I-------------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  231 LFLEGRPLFTLSQ-----LLAYRSGN-ADDPEQLLEKI-------------EDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHhcCCCcccHHH-----HHhHhccC-ccCHHHHHHhC-------------cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            987 567764311     11111110 11111111111             11257889999999999999999999987


Q ss_pred             HH
Q 035782          144 LK  145 (159)
Q Consensus       144 l~  145 (159)
                      -+
T Consensus       292 yr  293 (1431)
T KOG1240|consen  292 YR  293 (1431)
T ss_pred             hh
Confidence            43

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.71  E-value=2.6e-09  Score=78.97  Aligned_cols=125  Identities=21%  Similarity=0.227  Sum_probs=87.1

Q ss_pred             ccCCCC-ceEEcccccceecCC-CCCccccccccc-ccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            2 LLDEDM-VAHVSDFGISKLLGD-GDDSVTQTMTMA-TIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         2 li~~~~-~~kl~Dfg~~~~~~~-~~~~~~~~~~~g-t~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      +++.++ ..|++|||+|..+.. .+........+| ++.|.|||...+. ......|+||+|+++..++.|..|+.....
T Consensus       156 ~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~  235 (601)
T KOG0590|consen  156 LLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSR  235 (601)
T ss_pred             hhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccc
Confidence            567778 899999999998876 555545555678 9999999988774 456789999999999999999999876544


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      .+..+..|........  .             ...........++..+++..+|+.|.+.+++.
T Consensus       236 ~~~~~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~  284 (601)
T KOG0590|consen  236 KDGRYSSWKSNKGRFT--Q-------------LPWNSISDQAHDLLHKILKENPSNRLSIEELK  284 (601)
T ss_pred             ccccceeecccccccc--c-------------CccccCChhhhhcccccccCCchhcccccccc
Confidence            3332222222110000  0             00112334567778888889999999988765

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.49  E-value=4.5e-07  Score=63.23  Aligned_cols=113  Identities=19%  Similarity=0.167  Sum_probs=68.8

Q ss_pred             ceEEcccccceecCCCCC----cccccccccccccccccccCCC--c----cccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            8 VAHVSDFGISKLLGDGDD----SVTQTMTMATIGYMAPEYGSEG--I----VSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         8 ~~kl~Dfg~~~~~~~~~~----~~~~~~~~gt~~~~~pe~~~~~--~----~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      .+.++|||.|-.-.+.+-    ....-...|.-..+|||+...-  +    .-.++|.|+.|.+-||++....||..-..
T Consensus       383 ~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe  462 (598)
T KOG4158|consen  383 QLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE  462 (598)
T ss_pred             EEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch
Confidence            457999998865322111    1111112355668999975432  2    12579999999999999999999875211


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT  138 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  138 (159)
                      .-.+...+-...            +      ...+..+++.+.+++...++.||++|++..
T Consensus       463 m~L~~r~Yqe~q------------L------Palp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  463 MLLDTRTYQESQ------------L------PALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             heechhhhhhhh------------C------CCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence            111111111100            1      112335677889999999999999999854

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.39  E-value=2.8e-06  Score=59.98  Aligned_cols=148  Identities=12%  Similarity=0.106  Sum_probs=86.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhc-CCCCcc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTR-KKPTDE   74 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~-~~p~~~   74 (159)
                      +|+.+++.|.|.|-..-....+ +  ...-..+|...|.+||.-.     +...+...|.|.+|+++++++.| ++||.+
T Consensus       148 ~lVsd~~~V~LVdsDsfqi~~n-g--~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysG  224 (637)
T COG4248         148 FLVSDDSKVVLVDSDSFQINAN-G--TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSG  224 (637)
T ss_pred             eeeecCceEEEEcccceeeccC-C--ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCc
Confidence            3556666666666544333211 1  1223356888999999532     33455678999999999999886 899987


Q ss_pred             cccccc---cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCC--CCCCCcHHHHHHHHHHHHH
Q 035782           75 MFIGEM---SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMES--PDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        75 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~--p~~Rpt~~~ll~~l~~~~~  149 (159)
                      +.....   .+...+.......-.+ ......+.+.. .-....++.+..+...|+...  +.-|||++-.+..|.++..
T Consensus       225 I~~~~~ap~p~E~~Ia~g~f~ya~~-~~~g~~p~P~~-~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~  302 (637)
T COG4248         225 IPLISDAPNPLETDIAHGRFAYASD-QRRGLKPPPRS-IPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ  302 (637)
T ss_pred             ccccCCCCCcchhhhhcceeeechh-ccCCCCCCCCC-CChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence            654321   1111111111000000 01111111111 111234567888899998654  5789999999999999988


Q ss_pred             Hhhh
Q 035782          150 KFLD  153 (159)
Q Consensus       150 ~~~~  153 (159)
                      ++..
T Consensus       303 ~L~~  306 (637)
T COG4248         303 QLKK  306 (637)
T ss_pred             hhhh
Confidence            7654

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.99  E-value=0.00011  Score=51.04  Aligned_cols=127  Identities=12%  Similarity=0.055  Sum_probs=80.8

Q ss_pred             CceEEcccccce--ecCCCCCc---cc---ccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            7 MVAHVSDFGISK--LLGDGDDS---VT---QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         7 ~~~kl~Dfg~~~--~~~~~~~~---~~---~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ..+.|.|||+++  .+......   ..   .....||..|.++..-.+...+.+-|+||++.++.++..|..||......
T Consensus       164 ~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~  243 (322)
T KOG1164|consen  164 RTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMT  243 (322)
T ss_pred             ceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccccc
Confidence            468999999998  43222211   11   12345999999999888888889999999999999999999998654432


Q ss_pred             cc--cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           79 EM--SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        79 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      ..  .............                 .....+..+.+++..+-..+...+|....+...|+.+...
T Consensus       244 ~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~  300 (322)
T KOG1164|consen  244 DLKSKFEKDPRKLLTDR-----------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS  300 (322)
T ss_pred             chHHHHHHHhhhhcccc-----------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence            11  1111000000000                 0012234455555555568999999999888887776654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.96  E-value=7.5e-06  Score=63.31  Aligned_cols=90  Identities=24%  Similarity=0.180  Sum_probs=62.0

Q ss_pred             cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhh
Q 035782           32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV  111 (159)
Q Consensus        32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (159)
                      ..||+.|.+||...+......+|.|+.|+++++.++|..||......                 ++++..+.....-...
T Consensus       995 ~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq-----------------~~f~ni~~~~~~~p~g 1057 (1205)
T KOG0606|consen  995 VVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ-----------------QIFENILNRDIPWPEG 1057 (1205)
T ss_pred             ccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh-----------------hhhhccccCCCCCCCC
Confidence            56899999999999988889999999999999999999998764321                 1122222222222222


Q ss_pred             chHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782          112 KMDCLSSIMHLALDCCMESPDQRIYMT  138 (159)
Q Consensus       112 ~~~~~~~~~~l~~~cl~~~p~~Rpt~~  138 (159)
                      +.........+...-+..+|.+|..+.
T Consensus      1058 ~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1058 PEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             ccccChhhhhhhhhhhccCchhccCcc
Confidence            334445566677777778888886654

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.80  E-value=0.00018  Score=49.49  Aligned_cols=71  Identities=21%  Similarity=0.215  Sum_probs=56.5

Q ss_pred             CceEEcccccceecCCCCCccc-----ccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            7 MVAHVSDFGISKLLGDGDDSVT-----QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         7 ~~~kl~Dfg~~~~~~~~~~~~~-----~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ..+.+.|||+|+.+.+.....+     .....||-+||+...-.+..-+.+-|.=++|-+++..+.|..||++.+.
T Consensus       166 n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA  241 (449)
T KOG1165|consen  166 NVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA  241 (449)
T ss_pred             ceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence            4578999999999876544322     2234589999999887777777888999999999999999999998653

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.71  E-value=1.2e-05  Score=59.58  Aligned_cols=126  Identities=15%  Similarity=0.078  Sum_probs=76.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCccc--ccc-----cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVT--QTM-----TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTD   73 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~-----~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~   73 (159)
                      |.++.++..||+.|+++.....+.++..  ++.     .....-|.+||++.....+.++|++|+|+.++.+..+..+.-
T Consensus       131 i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~  210 (700)
T KOG2137|consen  131 IVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSII  210 (700)
T ss_pred             eeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchh
Confidence            4678889999999999876543222111  110     112335999999988888899999999999998885444322


Q ss_pred             ccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           74 EMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      ........+.....   ..+            ...+......+.++.+-+.+.+..++.-||++..++
T Consensus       211 ~a~~~~~~~~~~~~---~~~------------~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~  263 (700)
T KOG2137|consen  211 AANGGLLSYSFSRN---LLN------------AGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLL  263 (700)
T ss_pred             hccCCcchhhhhhc---ccc------------cccccccccCcHHHHHHHHHHhcCCcccCcchhhhh
Confidence            11111111100000   000            001111135677888899999999999999766554

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.36  E-value=0.00084  Score=52.56  Aligned_cols=66  Identities=14%  Similarity=-0.047  Sum_probs=51.9

Q ss_pred             CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCC
Q 035782            6 DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKP   71 (159)
Q Consensus         6 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p   71 (159)
                      +..++|+|||.+.-+.--.........++|-.+-.+|..-+.+++..+|.|+++.+++.|+.|+..
T Consensus       837 ~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  837 SKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM  902 (974)
T ss_pred             ccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence            346899999999765322222334446677789999999999999999999999999999998654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.16  E-value=0.0009  Score=48.94  Aligned_cols=125  Identities=18%  Similarity=0.182  Sum_probs=74.2

Q ss_pred             cCCC-CceEEcccccceecCCCCCccccc---ccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            3 LDED-MVAHVSDFGISKLLGDGDDSVTQT---MTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         3 i~~~-~~~kl~Dfg~~~~~~~~~~~~~~~---~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      +..+ ...+++|||+...+..........   ..-|...|++||...+ -++...|++++|.++.+...+..++..-+. 
T Consensus       255 ~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-  332 (524)
T KOG0601|consen  255 TTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN-  332 (524)
T ss_pred             cccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC-
Confidence            3445 678999999998886554332221   1135667999998877 457788999999999999887765432111 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                                   ..|.++-...+....     .......+...+..+++.++-.|+++.. +..+.-|.
T Consensus       333 -------------~~W~~~r~~~ip~e~-----~~~~s~~l~~~~~~~~d~~~~~~~~~q~-~~~l~~i~  383 (524)
T KOG0601|consen  333 -------------SSWSQLRQGYIPLEF-----CEGGSSSLRSVTSQMLDEDPRLRLTAQI-LTALNVIH  383 (524)
T ss_pred             -------------CCccccccccCchhh-----hcCcchhhhhHHHHhcCcchhhhhHHHH-Hhcccccc
Confidence                         111111000000000     0011233444788899999999998764 44444443

>PRK09188 serine/threonine protein kinase; Provisional

Probab=97.10  E-value=0.00027  Score=49.78  Aligned_cols=46  Identities=17%  Similarity=0.142  Sum_probs=32.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCccc------ccccccccccccccccCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVT------QTMTMATIGYMAPEYGSE   46 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~------~~~~~gt~~~~~pe~~~~   46 (159)
                      ||++.++.+||+|||+++.+........      .+...+++.|.+||.+..
T Consensus       143 ILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        143 WLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             EEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            5778889999999999997654332111      134567788999997654

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.01  E-value=0.0015  Score=45.16  Aligned_cols=38  Identities=24%  Similarity=0.453  Sum_probs=31.4

Q ss_pred             cccccccccccccCCCccccchhhHhHHHHHHHHHhcC
Q 035782           32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRK   69 (159)
Q Consensus        32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~   69 (159)
                      ..+.++|.+|++-.....+.++|||+||.+-.+|..+.
T Consensus       242 ~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE  279 (458)
T KOG1266|consen  242 NTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE  279 (458)
T ss_pred             cccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence            34677899999877777788999999999988887654

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=96.87  E-value=0.00048  Score=52.51  Aligned_cols=58  Identities=17%  Similarity=0.200  Sum_probs=39.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHH
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGV   60 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~   60 (159)
                      ||++.++.+||+|||+++.......  ......+++.|.+||..... +-....++|++|.
T Consensus       135 ILl~~~g~vkL~DFGls~~~~~~~~--~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~  193 (669)
T cd05610         135 MLISNEGHIKLTDFGLSKVTLNREL--NMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGF  193 (669)
T ss_pred             EEEcCCCCEEEEeCCCCccccCCcc--cccccccCccccCccccccCCCCceeeeeeecCc
Confidence            6888999999999999987643221  22235688899999854332 2234466777774

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.84  E-value=0.0031  Score=41.85  Aligned_cols=72  Identities=19%  Similarity=0.063  Sum_probs=51.8

Q ss_pred             CceEEcccccceecCCCCCcccc-----cccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            7 MVAHVSDFGISKLLGDGDDSVTQ-----TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         7 ~~~kl~Dfg~~~~~~~~~~~~~~-----~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ..+-++|||+++.+.+.....+.     ..-.||..|.+-....+-.-+.+-|+=|+|.++...-.|..||++....
T Consensus       151 ~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~  227 (341)
T KOG1163|consen  151 NKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA  227 (341)
T ss_pred             ceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence            56789999999988654332221     2234788887776555444466789999999998888999999987643

>PRK12274 serine/threonine protein kinase; Provisional

Probab=96.21  E-value=0.0031  Score=41.10  Aligned_cols=72  Identities=17%  Similarity=0.055  Sum_probs=43.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCc----cc-------ccccccccccccccccCCC-ccc-cchhhHhHHHHHHHHHh
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS----VT-------QTMTMATIGYMAPEYGSEG-IVS-TKCDVYSYGVLLMETFT   67 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~----~~-------~~~~~gt~~~~~pe~~~~~-~~~-~~~dv~s~g~~~~~~~~   67 (159)
                      ||++.++.++|+|||++.........    ..       ......++.++.|+...-. ..+ .+.+.++-|.-+|.+++
T Consensus       123 ILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~  202 (218)
T PRK12274        123 WLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVT  202 (218)
T ss_pred             EEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHh
Confidence            57888899999999999865433211    00       0011134556666532211 122 34456678999999999


Q ss_pred             cCCCC
Q 035782           68 RKKPT   72 (159)
Q Consensus        68 ~~~p~   72 (159)
                      +..++
T Consensus       203 ~~~~~  207 (218)
T PRK12274        203 RRVLH  207 (218)
T ss_pred             ccCCc
Confidence            88764

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=95.79  E-value=0.001  Score=43.88  Aligned_cols=49  Identities=10%  Similarity=0.152  Sum_probs=30.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHH
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLME   64 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~   64 (159)
                      |+++.+| ++|+|||...........   .           .+.....++.++|+|++|+++.-
T Consensus       166 ili~~~g-i~liDfg~~~~~~e~~a~---d-----------~~vler~y~~~~di~~lg~~~~~  214 (232)
T PRK10359        166 FIVSKNG-LRIIDLSGKRCTAQRKAK---D-----------RIDLERHYGIKNEIKDLGYYLLI  214 (232)
T ss_pred             EEEeCCC-EEEEECCCcccccchhhH---H-----------HHHHHhHhcccccccceeEeehH
Confidence            4677778 999999987654211110   0           02222245567999999987653

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=93.37  E-value=0.088  Score=39.23  Aligned_cols=83  Identities=17%  Similarity=0.198  Sum_probs=48.3

Q ss_pred             cchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCC
Q 035782           51 TKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMES  130 (159)
Q Consensus        51 ~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  130 (159)
                      +++|||++|.++.++..|..-++...  .......+.+....+.....-.+-.      ....++...+.++...|+-..
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~--~s~~l~~i~k~~~~d~~~~~~a~e~------~~~~~~d~~~~~~~~~c~~~~  181 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELT--ESEYLEILLKYYTDDQELLSTAMEH------LIQLLADKKRLPLLKKCLWLE  181 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHH--HHHHHHHHHHhccCchhHHHHHHHH------HHHHhhhHhHHHHhccCCccc
Confidence            68999999999999988765543321  1222223333322222111111110      112256677888999999999


Q ss_pred             CCCCCcHHHHH
Q 035782          131 PDQRIYMTDAA  141 (159)
Q Consensus       131 p~~Rpt~~~ll  141 (159)
                      |+.||...++.
T Consensus       182 ~~ir~l~~~~~  192 (725)
T KOG1093|consen  182 PIIRPLPMELS  192 (725)
T ss_pred             cccccchhHHh
Confidence            99988655443

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=88.53  E-value=0.8  Score=35.12  Aligned_cols=65  Identities=12%  Similarity=0.128  Sum_probs=38.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRK   69 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~   69 (159)
                      |.++..|.-||++|-++........  ......--..|..|+......  -..|.|.||+++++++.|.
T Consensus       136 VfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  136 VFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             EEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence            4577888889998888755421110  000011112345555433322  3469999999999999983

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=84.85  E-value=0.52  Score=36.20  Aligned_cols=65  Identities=18%  Similarity=0.151  Sum_probs=47.1

Q ss_pred             CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCC
Q 035782            4 DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKP   71 (159)
Q Consensus         4 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p   71 (159)
                      ..++..|.+||+....+....   ......+++.|++||+.....+..+.|+|+.+.---++..|.+|
T Consensus       365 ~s~~~~~~~~~~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pP  429 (829)
T KOG0576|consen  365 GSEEEVKLLDFAVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPP  429 (829)
T ss_pred             ccccccccccccCCcccCccc---ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCC
Confidence            345678889999877653221   34446789999999998888888889999998654455555544

>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins

Probab=83.82  E-value=2.3  Score=27.99  Aligned_cols=22  Identities=14%  Similarity=0.107  Sum_probs=17.7

Q ss_pred             CCCCcHHHHHHHHHHHHHHhhh
Q 035782          132 DQRIYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus       132 ~~Rpt~~~ll~~l~~~~~~~~~  153 (159)
                      ..|++.+++...|..+.+....
T Consensus       137 ~~r~~~~elk~EL~~l~~~~~~  158 (213)
T PF04301_consen  137 PPRRSFEELKEELAALYEFIKK  158 (213)
T ss_pred             CcCCCHHHHHHHHHHHHHHHhc
Confidence            4688999999999999776543

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=83.16  E-value=3.3  Score=34.37  Aligned_cols=108  Identities=21%  Similarity=0.264  Sum_probs=61.4

Q ss_pred             CCCCceEEc--ccccceecCCCCCcccccccccccccccccccCCCcc--ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            4 DEDMVAHVS--DFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV--STKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         4 ~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~--~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      +..+.+.++  ||+..+...+.....   ....+..+-++|......+  ....|+|.+|.....+..+..+-...    
T Consensus       323 ~~e~~~~~sl~~~~ss~~l~d~~~~~---~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~----  395 (1351)
T KOG1035|consen  323 DGEGVVAISLSDFDSSKPLPDNEKSF---SDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKS----  395 (1351)
T ss_pred             CccceeecchhhhcccccCCCcccch---hhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccc----
Confidence            344556666  777776654332211   1223344666766554433  34479999999988887765441110    


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                                  .....+++             ............+|...++++|+.+.+++..
T Consensus       396 ------------~~~~~~l~-------------~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~  434 (1351)
T KOG1035|consen  396 ------------AVPVSLLD-------------VLSTSELLDALPKCLDEDSEERLSALELLTH  434 (1351)
T ss_pred             ------------cchhhhhc-------------cccchhhhhhhhhhcchhhhhccchhhhhhc
Confidence                        00000110             0111145667889999999999999888753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	159
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-15
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-14
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-13
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		4e-13
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		1e-08
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-08
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		3e-08
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		5e-08
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		7e-08
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		8e-08
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		1e-07
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		1e-07
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		1e-07
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-07
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		2e-07
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		2e-07
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		2e-07
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-07
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-07
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		2e-07
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		2e-07
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		2e-07
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		2e-07
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		3e-07
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		3e-07
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		3e-07
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		3e-07
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		3e-07
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		3e-07
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		3e-07
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-07
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		3e-07
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-07
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		3e-07
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		4e-07
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		4e-07
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		4e-07
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		4e-07
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		5e-07
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		6e-07
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		6e-07
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		6e-07
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		6e-07
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		1e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		1e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		1e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		1e-06
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-06
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-06
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		1e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		1e-06
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-06
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-06
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-06
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		2e-06
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		2e-06
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-06
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		2e-06
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-06
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-06
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		2e-06
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-06
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-06
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-06
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-06
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		3e-06
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		3e-06
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		3e-06
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		3e-06
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-06
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		4e-06
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-06
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		4e-06
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		4e-06
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-06
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		4e-06
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		6e-06
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		6e-06
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		7e-06
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-06
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		7e-06
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-06
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		7e-06
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		7e-06
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		7e-06
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		7e-06
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		7e-06
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		7e-06
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		7e-06
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		7e-06
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		8e-06
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		8e-06
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		8e-06
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		8e-06
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		8e-06
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		9e-06
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		9e-06
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		9e-06
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		9e-06
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		9e-06
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		9e-06
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		9e-06
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		1e-05
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		1e-05
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-05
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		1e-05
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		1e-05
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		1e-05
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		1e-05
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-05
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		1e-05
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		1e-05
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-05
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		1e-05
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-05
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		1e-05
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		1e-05
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-05
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-05
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		1e-05
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		1e-05
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		1e-05
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		1e-05
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		1e-05
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		1e-05
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		1e-05
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-05
1fvr_A	327	Tie2 Kinase Domain Length = 327		2e-05
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-05
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		2e-05
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-05
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-05
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-05
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		2e-05
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		2e-05
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-05
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		2e-05
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-05
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-05
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		3e-05
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		3e-05
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		3e-05
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		3e-05
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-05
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-05
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-05
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-05
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		3e-05
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		3e-05
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-05
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		3e-05
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		3e-05
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		3e-05
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		3e-05
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		3e-05
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-05
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		3e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		3e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		3e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		3e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		3e-05
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-05
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		3e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		3e-05
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		3e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		3e-05
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		3e-05
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		3e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		3e-05
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		3e-05
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		4e-05
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		4e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		4e-05
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		4e-05
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		4e-05
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		4e-05
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		4e-05
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-05
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		4e-05
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		5e-05
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-05
2pl0_A	289	Lck Bound To Imatinib Length = 289		5e-05
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		5e-05
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		5e-05
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-05
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		5e-05
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		5e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		5e-05
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-05
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		5e-05
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		5e-05
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		6e-05
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		6e-05
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		6e-05
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		6e-05
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		6e-05
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		6e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-05
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		6e-05
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		6e-05
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		6e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		7e-05
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		7e-05
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		7e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		7e-05
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		7e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		7e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		7e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		7e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		7e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		7e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		7e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		8e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		8e-05
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		8e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		8e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		8e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		8e-05
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		8e-05
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		8e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		8e-05
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		8e-05
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		8e-05
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		8e-05
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		8e-05
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		8e-05
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		9e-05
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		9e-05
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		9e-05
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		9e-05
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		9e-05
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		1e-04
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		1e-04
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		1e-04
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		1e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-04
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		1e-04
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		1e-04
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-04
4fl3_A	635	Structural And Biophysical Characterization Of The		1e-04
4fl2_A	636	Structural And Biophysical Characterization Of The		1e-04
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-04
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-04
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-04
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		3e-04
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		3e-04
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		3e-04
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		3e-04
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		3e-04
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		3e-04
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		3e-04
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		3e-04
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		3e-04
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		3e-04
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		3e-04
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		3e-04
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		3e-04
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		4e-04
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		4e-04
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		4e-04
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		4e-04
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		4e-04
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		4e-04
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		5e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		6e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		6e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		6e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		6e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		6e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		6e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		6e-04
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		7e-04
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		7e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		7e-04
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		7e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		7e-04
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		7e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		7e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		7e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		7e-04
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		7e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		7e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		7e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		7e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		7e-04
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		7e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		7e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		7e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		7e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		7e-04
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		8e-04
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		9e-04
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		9e-04

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 7/147 (4%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLDE+ V  ++DFGISK   + D +    +   T+GY+ PEY  +G ++ K DVYS+GV
Sbjct: 170 ILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGV 229
Query: 61  LLMETFTRKKPTDEMFIGEM-SLRDW-VNKSLSGELTQVIDANLARDEQSFFVKMDCLSS 118
           +L E    +    +    EM +L +W V    +G+L Q++D NLA       ++ + L  
Sbjct: 230 VLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK-----IRPESLRK 284
Query: 119 IMHLALDCCMESPDQRIYMTDAAAKLK 145
               A+ C   S + R  M D   KL+
Sbjct: 285 FGDTAVKCLALSSEDRPSMGDVLWKLE 311

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 7/147 (4%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLDE+ V  ++DFGISK   +   +    +   T+GY+ PEY  +G ++ K DVYS+GV
Sbjct: 170 ILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGV 229
Query: 61  LLMETFTRKKPTDEMFIGEM-SLRDW-VNKSLSGELTQVIDANLARDEQSFFVKMDCLSS 118
           +L E    +    +    EM +L +W V    +G+L Q++D NLA       ++ + L  
Sbjct: 230 VLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK-----IRPESLRK 284
Query: 119 IMHLALDCCMESPDQRIYMTDAAAKLK 145
               A+ C   S + R  M D   KL+
Sbjct: 285 FGDTAVKCLALSSEDRPSMGDVLWKLE 311

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLDE+  A V DFG++KL+ D  D         TIG++APEY S G  S K DV+ YGV
Sbjct: 173 ILLDEEFEAVVGDFGLAKLM-DYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGV 231
Query: 61  LLMETFTRKKPTDEMFIG---EMSLRDWVNKSLS-GELTQVIDANLARDEQSFFVKMDCL 116
           +L+E  T ++  D   +    ++ L DWV   L   +L  ++D +L  +      K + +
Sbjct: 232 MLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGN-----YKDEEV 286
Query: 117 SSIMHLALDCCMESPDQRIYMTDAAAKLK 145
             ++ +AL C   SP +R  M++    L+
Sbjct: 287 EQLIQVALLCTQSSPMERPKMSEVVRMLE 315

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 10/149 (6%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLDE+  A V DFG++KL+ D  D          IG++APEY S G  S K DV+ YGV
Sbjct: 165 ILLDEEFEAVVGDFGLAKLM-DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGV 223
Query: 61  LLMETFTRKKPTDEMFIG---EMSLRDWVNKSLS-GELTQVIDANLARDEQSFFVKMDCL 116
           +L+E  T ++  D   +    ++ L DWV   L   +L  ++D +L  +      K + +
Sbjct: 224 MLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGN-----YKDEEV 278
Query: 117 SSIMHLALDCCMESPDQRIYMTDAAAKLK 145
             ++ +AL C   SP +R  M++    L+
Sbjct: 279 EQLIQVALLCTQSSPMERPKMSEVVRMLE 307

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E+ V  + DFG+++ +    D V +  T   + +MAPE   + I STK DV+SYGV
Sbjct: 230 ILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGV 289
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 290 LLWEIFS 296

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLDE   A +SDFG+++       +V  +  + T  YMAPE    G ++ K D+YS+GV
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGV 222
Query: 61  LLMETFTRKKPTDE 74
           +L+E  T     DE
Sbjct: 223 VLLEIITGLPAVDE 236

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLDE   A +SDFG+++       +V     + T  YMAPE    G ++ K D+YS+GV
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGV 222
Query: 61  LLMETFTRKKPTDE 74
           +L+E  T     DE
Sbjct: 223 VLLEIITGLPAVDE 236

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLDE   A +SDFG+++        V     + T  YMAPE    G ++ K D+YS+GV
Sbjct: 158 ILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGV 216
Query: 61  LLMETFTRKKPTDE 74
           +L+E  T     DE
Sbjct: 217 VLLEIITGLPAVDE 230

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA---TIGYMAPEYGSEGIVSTKCDVYS 57
           IL++ ++V  VSDFG+S+ L D     T T  +     I + APE       ++  DV+S
Sbjct: 166 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS 225
Query: 58  YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLS 117
           YG+++ E          M  GE    D  N+ +   + Q  D  L          MDC S
Sbjct: 226 YGIVMWEV---------MSYGERPYWDMTNQDVINAIEQ--DYRLP-------PPMDCPS 267
Query: 118 SIMHLALDCCMESPDQR 134
           ++  L LDC  +  + R
Sbjct: 268 ALHQLMLDCWQKDRNHR 284

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA---TIGYMAPEYGSEGIVSTKCDVYS 57
           IL++ ++V  VSDFG+S+ L D     T T  +     I + APE       ++  DV+S
Sbjct: 140 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS 199
Query: 58  YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLS 117
           YG+++ E          M  GE    D  N+ +   + Q  D  L          MDC S
Sbjct: 200 YGIVMWEV---------MSYGERPYWDMTNQDVINAIEQ--DYRLP-------PPMDCPS 241
Query: 118 SIMHLALDCCMESPDQR 134
           ++  L LDC  +  + R
Sbjct: 242 ALHQLMLDCWQKDRNHR 258

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED VA VSDFG++K     + S TQ      + + APE   E   STK DV+S+G+
Sbjct: 139 VLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGI 193
Query: 61  LLMETFT 67
           LL E ++
Sbjct: 194 LLWEIYS 200

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLDE   A +SDFG+++        V  +  + T  Y APE    G ++ K D+YS+GV
Sbjct: 155 ILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGV 213
Query: 61  LLMETFTRKKPTDE 74
           +L+E  T     DE
Sbjct: 214 VLLEIITGLPAVDE 227

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 135 ILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 193
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 194 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 233
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 234 LHDLMCQCWRKEPEER 249

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 204 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 243
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 244 LHDLMCQCWRKDPEER 259

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 138 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 196
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 197 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 236
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 237 LHDLMCQCWRKEPEER 252

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA---TIGYMAPEYGSEGIVSTKCDVYS 57
           IL++ ++V  VSDFG+S+ L +     T+T ++     I + APE  +    ++  D +S
Sbjct: 149 ILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWS 208
Query: 58  YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLS 117
           YG+++ E          M  GE    D  N+ +   + Q  D  L           DC +
Sbjct: 209 YGIVMWEV---------MSFGERPYWDMSNQDVINAIEQ--DYRLPPPP-------DCPT 250
Query: 118 SIMHLALDCCMESPDQRIYMTDAAAKLKKI 147
           S+  L LDC  +  + R       + L K+
Sbjct: 251 SLHQLMLDCWQKDRNARPRFPQVVSALDKM 280

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    ++DFG++KLL  D D  V +    + I + APE  S+ I S + DV+S+G
Sbjct: 142 ILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 201
Query: 60  VLLMETFT 67
           V+L E FT
Sbjct: 202 VVLYELFT 209

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 142 ILVGENLVCKVADFGLARLIEDNEWTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 200
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 201 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 240
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 241 LHDLMCQCWRKEPEER 256

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 370 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 409
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 410 LHDLMCQCWRKEPEER 425

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 142 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 200
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 201 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 240
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 241 LHDLMCQCWRKEPEER 256

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 370 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 409
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 410 LHDLMCQCWRKEPEER 425

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 370 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 409
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 410 LHDLMCQCWRKEPEER 425

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED VA VSDFG++K     + S TQ      + + APE   E   STK DV+S+G+
Sbjct: 133 VLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGI 187
Query: 61  LLMETFT 67
           LL E ++
Sbjct: 188 LLWEIYS 194

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED VA VSDFG++K     + S TQ      + + APE   E   STK DV+S+G+
Sbjct: 148 VLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGI 202
Query: 61  LLMETFT 67
           LL E ++
Sbjct: 203 LLWEIYS 209

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 136 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 194
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 195 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 234
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 235 LHDLMCQCWRKDPEER 250

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 204 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 243
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 244 LHDLMCQCWRKDPEER 259

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 134 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 192
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 193 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 232
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 233 LHDLMCQCWRKDPEER 248

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 204 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 243
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 244 LHDLMCQCWRKDPEER 259

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 204 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 243
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 244 LHDLMCQCWRKDPEER 259

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 204 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 243
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 244 LHDLMCQCWRKDPEER 259

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED VA VSDFG++K     + S TQ      + + APE   E   STK DV+S+G+
Sbjct: 320 VLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGI 374
Query: 61  LLMETFT 67
           LL E ++
Sbjct: 375 LLWEIYS 381

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 204 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 243
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 244 LHDLMCQCWRKDPEER 259

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 204 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 243
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 244 LHDLMCQCWRKDPEER 259

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 204 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 243
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 244 LHDLMCQCWRKDPEER 259

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E  V  +SDFG+S+   DG  + +  +    + + APE  + G  S++ DV+S+G+L
Sbjct: 245 LVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGIL 304
Query: 62  LMETFT 67
           L ETF+
Sbjct: 305 LWETFS 310

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 21/149 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIG--YMAPEYGSEGIVSTKCDVYSY 58
           IL++ ++V  VSDFG+S++L D D   T T +   I   + APE  S    ++  DV+S+
Sbjct: 178 ILVNSNLVCKVSDFGLSRVLED-DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 236
Query: 59  GVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSS 118
           G+++ E  T          GE    +  N     E+ + I+     D       MDC S+
Sbjct: 237 GIVMWEVMT---------YGERPYWELSNH----EVMKAIN-----DGFRLPTPMDCPSA 278
Query: 119 IMHLALDCCMESPDQRIYMTDAAAKLKKI 147
           I  L + C  +   +R    D  + L K+
Sbjct: 279 IYQLMMQCWQQERARRPKFADIVSILDKL 307

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+D D+   VSDFG+++ + D D  V+   T   + + APE       S+K DV+++G+L
Sbjct: 136 LVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGIL 194
Query: 62  LMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQ---VIDANLARDEQSFFVKMDCLSS 118
           + E F+         +G+M    + N  +  +++Q   +   +LA D            +
Sbjct: 195 MWEVFS---------LGKMPYDLYTNSEVVLKVSQGHRLYRPHLASD------------T 233
Query: 119 IMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
           I  +   C  E P++R       + ++ ++EK
Sbjct: 234 IYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+ +L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 312 ILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 370
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +     VN+ +   L QV        E+ + +    +C  S
Sbjct: 371 LLTELTTK---------GRVPYPGMVNREV---LDQV--------ERGYRMPCPPECPES 410
Query: 119 IMHLALDCCMESPDQR 134
           +  L   C  + P++R
Sbjct: 411 LHDLMCQCWRKDPEER 426

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA---TIGYMAPEYGSEGIVSTKCDVYS 57
           IL++ ++V  VSDFG+S+ L +     T T ++     I + APE  +    ++  D +S
Sbjct: 147 ILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWS 206
Query: 58  YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLS 117
           YG+++ E          M  GE    D  N+ +   + Q  D  L           DC +
Sbjct: 207 YGIVMWEV---------MSFGERPYWDMSNQDVINAIEQ--DYRLPPPP-------DCPT 248
Query: 118 SIMHLALDCCMESPDQRIYMTDAAAKLKKI 147
           S+  L LDC  +  + R       + L K+
Sbjct: 249 SLHQLMLDCWQKDRNARPRFPQVVSALDKM 278

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    ++DFG++KLL  D D  V +    + I + APE  S+ I S + DV+S+G
Sbjct: 145 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 204
Query: 60  VLLMETFT 67
           V+L E FT
Sbjct: 205 VVLYELFT 212

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E  V  +SDFG+S+   DG  + +  +    + + APE  + G  S++ DV+S+G+L
Sbjct: 245 LVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGIL 304
Query: 62  LMETFT 67
           L ETF+
Sbjct: 305 LWETFS 310

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    ++DFG++KLL  D D  V +    + I + APE  S+ I S + DV+S+G
Sbjct: 146 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 205
Query: 60  VLLMETFT 67
           V+L E FT
Sbjct: 206 VVLYELFT 213

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    ++DFG++KLL  D D  V +    + I + APE  S+ I S + DV+S+G
Sbjct: 158 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 217
Query: 60  VLLMETFT 67
           V+L E FT
Sbjct: 218 VVLYELFT 225

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 23/136 (16%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+   ++  ++DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 136 ILVGNGLICKIADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 194
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV--KMDCLSS 118
           LL E  T+         G +      N+ +   L QV        E+ + +    DC  S
Sbjct: 195 LLTELVTK---------GRVPYPGMNNREV---LEQV--------ERGYRMPCPQDCPIS 234
Query: 119 IMHLALDCCMESPDQR 134
           +  L + C  + P++R
Sbjct: 235 LHELMIHCWKKDPEER 250

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT-MATIGYMAPEYGSEGIVSTKCDVYSYG 59
           I++       V DFGI++ + D  +SVTQT   + T  Y++PE      V  + DVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 60  VLLMETFTRKKP 71
            +L E  T + P
Sbjct: 207 CVLYEVLTGEPP 218

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT-MATIGYMAPEYGSEGIVSTKCDVYSYG 59
           I++       V DFGI++ + D  +SVTQT   + T  Y++PE      V  + DVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 60  VLLMETFTRKKP 71
            +L E  T + P
Sbjct: 207 CVLYEVLTGEPP 218

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT-MATIGYMAPEYGSEGIVSTKCDVYSYG 59
           I++       V DFGI++ + D  +SVTQT   + T  Y++PE      V  + DVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 60  VLLMETFTRKKP 71
            +L E  T + P
Sbjct: 207 CVLYEVLTGEPP 218

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT-MATIGYMAPEYGSEGIVSTKCDVYSYG 59
           I++       V DFGI++ + D  +SVTQT   + T  Y++PE      V  + DVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 60  VLLMETFTRKKP 71
            +L E  T + P
Sbjct: 207 CVLYEVLTGEPP 218

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+    V  + DFG +      D     T    +  +MAPE       S KCDV+S+G+
Sbjct: 137 LLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGI 191
Query: 61  LLMETFTRKKPTDEMFIGEMSLR 83
           +L E  TR+KP DE  IG  + R
Sbjct: 192 ILWEVITRRKPFDE--IGGPAFR 212

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+    V  + DFG +      D     T    +  +MAPE       S KCDV+S+G+
Sbjct: 138 LLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGI 192
Query: 61  LLMETFTRKKPTDEMFIGEMSLR 83
           +L E  TR+KP DE  IG  + R
Sbjct: 193 ILWEVITRRKPFDE--IGGPAFR 213

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+    V  + DFG+++ +    + V +      + +MAPE   EGI + K DV+SYG+
Sbjct: 203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGI 262
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 263 LLWEIFS 269

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT-MATIGYMAPEYGSEGIVSTKCDVYSYG 59
           I++       V DFGI++ + D  +SVTQT   + T  Y++PE      V  + DVYS G
Sbjct: 164 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 223
Query: 60  VLLMETFTRKKP 71
            +L E  T + P
Sbjct: 224 CVLYEVLTGEPP 235

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 394 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGI 452
Query: 61  LLMETFTRKK 70
           LL E  T+ +
Sbjct: 453 LLTELTTKGR 462

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 30/153 (19%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E     +SDFG+S+ + + D  V ++     + +MA E   + I +T+ DV+S+GV
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 61  LLMETFTRKK------PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMD 114
           LL E  T         P + +F                        NL +         +
Sbjct: 241 LLWEIVTLGGNPYPGIPPERLF------------------------NLLKTGHRMERPDN 276
Query: 115 CLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147
           C   +  L L C  + PD+R    D +  L+K+
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 30/153 (19%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E     +SDFG+S+ + + D  V ++     + +MA E   + I +T+ DV+S+GV
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 61  LLMETFTRKK------PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMD 114
           LL E  T         P + +F                        NL +         +
Sbjct: 241 LLWEIVTLGGNPYPGIPPERLF------------------------NLLKTGHRMERPDN 276
Query: 115 CLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147
           C   +  L L C  + PD+R    D +  L+K+
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S+++ D  ++V T T     + + APE       ++  DV+SYG
Sbjct: 176 ILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYG 235
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           +++ E          M  GE    D  N+        VI A    +       MDC + +
Sbjct: 236 IVMWEV---------MSYGERPYWDMSNQD-------VIKA--IEEGYRLPAPMDCPAGL 277
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +   +R
Sbjct: 278 HQLMLDCWQKERAER 292

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 30/153 (19%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E     +SDFG+S+ + + D  V ++     + +MA E   + I +T+ DV+S+GV
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 61  LLMETFTRKK------PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMD 114
           LL E  T         P + +F                        NL +         +
Sbjct: 241 LLWEIVTLGGNPYPGIPPERLF------------------------NLLKTGHRMERPDN 276
Query: 115 CLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147
           C   +  L L C  + PD+R    D +  L+K+
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ V  VSDFG+++ + D D   + T T   + + +PE  S    S+K DV+S+GVL
Sbjct: 138 LVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 196
Query: 62  LMETFTRKK 70
           + E F+  K
Sbjct: 197 MWEVFSEGK 205

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ V  VSDFG+++ + D D   + T T   + + +PE  S    S+K DV+S+GVL
Sbjct: 136 LVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 194
Query: 62  LMETFTRKK 70
           + E F+  K
Sbjct: 195 MWEVFSEGK 203

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT-MATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL+       V DFGI++ + D  +SV QT   + T  Y++PE      V  + DVYS G
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 60  VLLMETFTRKKP 71
            +L E  T + P
Sbjct: 207 CVLYEVLTGEPP 218

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ V  VSDFG+++ + D D   + T T   + + +PE  S    S+K DV+S+GVL
Sbjct: 135 LVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 193
Query: 62  LMETFTRKK 70
           + E F+  K
Sbjct: 194 MWEVFSEGK 202

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ V  VSDFG+++ + D D   + T T   + + +PE  S    S+K DV+S+GVL
Sbjct: 133 LVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 191
Query: 62  LMETFTRKK 70
           + E F+  K
Sbjct: 192 MWEVFSEGK 200

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ V  VSDFG+++ + D D   + T T   + + +PE  S    S+K DV+S+GVL
Sbjct: 135 LVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 193
Query: 62  LMETFTRKK 70
           + E F+  K
Sbjct: 194 MWEVFSEGK 202

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +L+D ++V  VSDFG+S++L D  D+  T T     I + APE  +    S+  DV+S+G
Sbjct: 182 VLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG 241
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           V++ E         E     M+ RD ++    G                    M C  ++
Sbjct: 242 VVMWEVLA----YGERPYWNMTNRDVISSVEEG--------------YRLPAPMGCPHAL 283
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +   QR
Sbjct: 284 HQLMLDCWHKDRAQR 298

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +L+D ++V  VSDFG+S++L D  D+  T T     I + APE  +    S+  DV+S+G
Sbjct: 182 VLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG 241
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           V++ E         E     M+ RD ++    G                    M C  ++
Sbjct: 242 VVMWEVLA----YGERPYWNMTNRDVISSVEEG--------------YRLPAPMGCPHAL 283
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +   QR
Sbjct: 284 HQLMLDCWHKDRAQR 298

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ V  VSDFG+++ + D D   + T T   + + +PE  S    S+K DV+S+GVL
Sbjct: 155 LVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 213
Query: 62  LMETFTRKK 70
           + E F+  K
Sbjct: 214 MWEVFSEGK 222

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GV
Sbjct: 181 VLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 240
Query: 61  LLMETFT------RKKPTDEMF 76
           LL E FT         P +E+F
Sbjct: 241 LLWEIFTLGGSPYPGVPVEELF 262

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + +PE  +    ++  DV+SYG
Sbjct: 176 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 235
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L E  +      E    EMS +D         + + +D     +       MDC +++
Sbjct: 236 IVLWEVMS----YGERPYWEMSNQD---------VIKAVD-----EGYRLPPPMDCPAAL 277
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +  + R
Sbjct: 278 YQLMLDCWQKDRNNR 292

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + +PE  +    ++  DV+SYG
Sbjct: 149 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 208
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L E  +      E    EMS +D         + + +D     +       MDC +++
Sbjct: 209 IVLWEVMS----YGERPYWEMSNQD---------VIKAVD-----EGYRLPPPMDCPAAL 250
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +  + R
Sbjct: 251 YQLMLDCWQKDRNNR 265

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + +PE  +    ++  DV+SYG
Sbjct: 149 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 208
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L E  +      E    EMS +D         + + +D     +       MDC +++
Sbjct: 209 IVLWEVMS----YGERPYWEMSNQD---------VIKAVD-----EGYRLPPPMDCPAAL 250
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +  + R
Sbjct: 251 YQLMLDCWQKDRNNR 265

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + +PE  +    ++  DV+SYG
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L E  +      E    EMS +D         + + +D             MDC +++
Sbjct: 238 IVLWEVMS----YGERPYWEMSNQD---------VIKAVDEGY-----RLPPPMDCPAAL 279
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +  + R
Sbjct: 280 YQLMLDCWQKDRNNR 294

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 19/148 (12%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + +PE  +    ++  DV+SYG
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L E  +      E    EMS +D         + + +D     +       MDC +++
Sbjct: 238 IVLWEVMS----YGERPYWEMSNQD---------VIKAVD-----EGYRLPPPMDCPAAL 279
Query: 120 MHLALDCCMESPDQRIYMTDAAAKLKKI 147
             L LDC  +  + R       + L K+
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + +PE  +    ++  DV+SYG
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L E  +      E    EMS +D         + + +D     +       MDC +++
Sbjct: 238 IVLWEVMS----YGERPYWEMSNQD---------VIKAVD-----EGYRLPPPMDCPAAL 279
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +  + R
Sbjct: 280 YQLMLDCWQKDRNNR 294

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + +PE  +    ++  DV+SYG
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L E  +      E    EMS +D         + + +D     +       MDC +++
Sbjct: 238 IVLWEVMS----YGERPYWEMSNQD---------VIKAVD-----EGYRLPPPMDCPAAL 279
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +  + R
Sbjct: 280 YQLMLDCWQKDRNNR 294

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + +PE  +    ++  DV+SYG
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L E  +      E    EMS +D         + + +D     +       MDC +++
Sbjct: 238 IVLWEVMS----YGERPYWEMSNQD---------VIKAVD-----EGYRLPPPMDCPAAL 279
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +  + R
Sbjct: 280 YQLMLDCWQKDRNNR 294

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + +PE  +    ++  DV+SYG
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L E  +      E    EMS +D         + + +D     +       MDC +++
Sbjct: 238 IVLWEVMS----YGERPYWEMSNQD---------VIKAVD-----EGYRLPPPMDCPAAL 279
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +  + R
Sbjct: 280 YQLMLDCWQKDRNNR 294

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + +PE  +    ++  DV+SYG
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L E  +      E    EMS +D         + + +D     +       MDC +++
Sbjct: 238 IVLWEVMS----YGERPYWEMSNQD---------VIKAVD-----EGYRLPPPMDCPAAL 279
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +  + R
Sbjct: 280 YQLMLDCWQKDRNNR 294

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + +PE  +    ++  DV+SYG
Sbjct: 166 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 225
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L E  +      E    EMS +D         + + +D     +       MDC +++
Sbjct: 226 IVLWEVMS----YGERPYWEMSNQD---------VIKAVD-----EGYRLPPPMDCPAAL 267
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +  + R
Sbjct: 268 YQLMLDCWQKDRNNR 282

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + APE  +    ++  DV+SYG
Sbjct: 155 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYG 214
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           +++ E  +          GE    +  N+        VI A    +       MDC +++
Sbjct: 215 IVMWEVVS---------YGERPYWEMTNQD-------VIKA--VEEGYRLPSPMDCPAAL 256
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +  + R
Sbjct: 257 YQLMLDCWQKERNSR 271

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GV
Sbjct: 166 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 225
Query: 61  LLMETFT------RKKPTDEMF 76
           LL E FT         P +E+F
Sbjct: 226 LLWEIFTLGGSPYPGVPVEELF 247

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 239 LLWEIFS 245

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 170 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 229
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 230 LLWEIFS 236

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ + +V  + DFG+S+ +   D       TM  I +M PE       +T+ DV+S+GV+
Sbjct: 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 249
Query: 62  LMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDA-NLARDEQSFFVKMDCLSSIM 120
           L E FT  K            + W   S     T+ ID     R+ +       C   + 
Sbjct: 250 LWEIFTYGK------------QPWYQLS----NTEAIDCITQGRELER---PRACPPEVY 290
Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            +   C    P QR  + D  A+L+ + +
Sbjct: 291 AIMRGCWQREPQQRHSIKDVHARLQALAQ 319

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 170 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 229
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 230 LLWEIFS 236

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 239 LLWEIFS 245

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GV
Sbjct: 174 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 233
Query: 61  LLMETFT------RKKPTDEMF 76
           LL E FT         P +E+F
Sbjct: 234 LLWEIFTLGGSPYPGVPVEELF 255

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ + +V  + DFG+S+ +   D       TM  I +M PE       +T+ DV+S+GV+
Sbjct: 161 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 220
Query: 62  LMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDA-NLARDEQSFFVKMDCLSSIM 120
           L E FT  K            + W   S     T+ ID     R+ +       C   + 
Sbjct: 221 LWEIFTYGK------------QPWYQLS----NTEAIDCITQGRELER---PRACPPEVY 261
Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            +   C    P QR  + D  A+L+ + +
Sbjct: 262 AIMRGCWQREPQQRHSIKDVHARLQALAQ 290

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GV
Sbjct: 170 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 229
Query: 61  LLMETFT------RKKPTDEMF 76
           LL E FT         P +E+F
Sbjct: 230 LLWEIFTLGGSPYPGVPVEELF 251

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 239 LLWEIFS 245

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GV
Sbjct: 173 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 232
Query: 61  LLMETFT------RKKPTDEMF 76
           LL E FT         P +E+F
Sbjct: 233 LLWEIFTLGGSPYPGVPVEELF 254

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG++++L D  ++   T      I + +PE  +    ++  DV+SYG
Sbjct: 178 ILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L E  +      E    EMS +D         + + +D     +       MDC +++
Sbjct: 238 IVLWEVMS----YGERPYWEMSNQD---------VIKAVD-----EGYRLPPPMDCPAAL 279
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +  + R
Sbjct: 280 YQLMLDCWQKDRNNR 294

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+   +V  ++DFG+++++ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 142 ILVSASLVCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGSFTIKSDVWSFGI 200
Query: 61  LLMETFT 67
           LLME  T
Sbjct: 201 LLMEIVT 207

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GV
Sbjct: 181 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 240
Query: 61  LLMETFT------RKKPTDEMF 76
           LL E FT         P +E+F
Sbjct: 241 LLWEIFTLGGSPYPGVPVEELF 262

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ + +V  + DFG+S+ +   D       TM  I +M PE       +T+ DV+S+GV+
Sbjct: 167 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 226
Query: 62  LMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDA-NLARDEQSFFVKMDCLSSIM 120
           L E FT  K            + W   S     T+ ID     R+ +       C   + 
Sbjct: 227 LWEIFTYGK------------QPWYQLS----NTEAIDCITQGRELER---PRACPPEVY 267
Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            +   C    P QR  + D  A+L+ + +
Sbjct: 268 AIMRGCWQREPQQRHSIKDVHARLQALAQ 296

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GV
Sbjct: 181 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 240
Query: 61  LLMETFT------RKKPTDEMF 76
           LL E FT         P +E+F
Sbjct: 241 LLWEIFTLGGSPYPGVPVEELF 262

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GV
Sbjct: 181 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 240
Query: 61  LLMETFT------RKKPTDEMF 76
           LL E FT         P +E+F
Sbjct: 241 LLWEIFTLGGSPYPGVPVEELF 262

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+D+     V DFG+S+L       ++      T  +MAPE   +   + K DVYS+GV
Sbjct: 170 LLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGV 227
Query: 61  LLMETFTRKKPTDEM-------FIGEMSLRDWVNKSLSGELTQVIDA---NLARDEQSFF 110
           +L E  T ++P   +        +G    R  + ++L+ ++  +I+    N      SF 
Sbjct: 228 ILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFA 287
Query: 111 VKMDCLSSIMHLAL 124
             MD L  ++  A+
Sbjct: 288 TIMDLLRPLIKSAV 301

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LL    VA + DFG+++ + +  + + +      + +MAPE   + + + + DV+SYG+
Sbjct: 183 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 242
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 243 LLWEIFS 249

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LL    VA + DFG+++ + +  + + +      + +MAPE   + + + + DV+SYG+
Sbjct: 191 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 250
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 251 LLWEIFS 257

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+D+     V DFG+S+L       +       T  +MAPE   +   + K DVYS+GV
Sbjct: 170 LLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGV 227
Query: 61  LLMETFTRKKPTDEM-------FIGEMSLRDWVNKSLSGELTQVIDA---NLARDEQSFF 110
           +L E  T ++P   +        +G    R  + ++L+ ++  +I+    N      SF 
Sbjct: 228 ILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFA 287
Query: 111 VKMDCLSSIMHLAL 124
             MD L  ++  A+
Sbjct: 288 TIMDLLRPLIKSAV 301

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1   ILLDEDMVAHVSDFGISKLL-GDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK L  D +    QT     + + APE  +    S+K DV+S+G
Sbjct: 142 VLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 201
Query: 60  VLLMETFTR-KKPTDEM 75
           VL+ E F+  +KP   M
Sbjct: 202 VLMWEAFSYGQKPYRGM 218

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LL    VA + DFG+++ + +  + + +      + +MAPE   + + + + DV+SYG+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 255 LLWEIFS 261

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 179 ILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 239 LLWEIFS 245

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LL    VA + DFG+++ + +  + + +      + +MAPE   + + + + DV+SYG+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 255 LLWEIFS 261

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LL    VA + DFG+++ + +  + + +      + +MAPE   + + + + DV+SYG+
Sbjct: 197 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 256
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 257 LLWEIFS 263

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LL    VA + DFG+++ + +  + + +      + +MAPE   + + + + DV+SYG+
Sbjct: 189 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 248
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 249 LLWEIFS 255

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GV
Sbjct: 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 281
Query: 61  LLMETFT------RKKPTDEMF 76
           LL E FT         P +E+F
Sbjct: 282 LLWEIFTLGGSPYPGVPVEELF 303

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 35/164 (21%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 61  LLMETFTRKK------PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMD 114
           L+ E FT         P +E+F                         L ++        +
Sbjct: 248 LMWEIFTLGGSPYPGIPVEELF------------------------KLLKEGHRMDKPAN 283
Query: 115 CLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI-----KEKFLD 153
           C + +  +  DC    P QR         L +I      E++LD
Sbjct: 284 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 35/164 (21%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 61  LLMETFTRKK------PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMD 114
           L+ E FT         P +E+F                         L ++        +
Sbjct: 248 LMWEIFTLGGSPYPGIPVEELF------------------------KLLKEGHRMDKPAN 283
Query: 115 CLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI-----KEKFLD 153
           C + +  +  DC    P QR         L +I      E++LD
Sbjct: 284 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+ ++L D  ++   T      I + +PE  +    ++  DV+SYG
Sbjct: 178 ILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L E  +      E    EMS +D         + + +D     +       MDC +++
Sbjct: 238 IVLWEVMS----YGERPYWEMSNQD---------VIKAVD-----EGYRLPPPMDCPAAL 279
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +  + R
Sbjct: 280 YQLMLDCWQKDRNNR 294

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1   ILLDEDMVAHVSDFGISKLL-GDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK L  D +    QT     + + APE  +    S+K DV+S+G
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 197
Query: 60  VLLMETFTR-KKPTDEM 75
           VL+ E F+  +KP   M
Sbjct: 198 VLMWEAFSYGQKPYRGM 214

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 175 ILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 235 LLWEIFS 241

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1   ILLDEDMVAHVSDFGISKLL-GDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK L  D +    QT     + + APE  +    S+K DV+S+G
Sbjct: 142 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 201
Query: 60  VLLMETFTR-KKPTDEM 75
           VL+ E F+  +KP   M
Sbjct: 202 VLMWEAFSYGQKPYRGM 218

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1   ILLDEDMVAHVSDFGISKLL-GDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK L  D +    QT     + + APE  +    S+K DV+S+G
Sbjct: 148 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 207
Query: 60  VLLMETFTR-KKPTDEM 75
           VL+ E F+  +KP   M
Sbjct: 208 VLMWEAFSYGQKPYRGM 224

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 179 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 239 LLWEIFS 245

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1   ILLDEDMVAHVSDFGISKLL-GDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK L  D +    QT     + + APE  +    S+K DV+S+G
Sbjct: 136 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 195
Query: 60  VLLMETFTR-KKPTDEM 75
           VL+ E F+  +KP   M
Sbjct: 196 VLMWEAFSYGQKPYRGM 212

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 170 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 229
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 230 LLWEIFS 236

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E+ VA ++DFG+S+     +  V +TM    + +MA E  +  + +T  DV+SYGV
Sbjct: 170 ILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 226
Query: 61  LLME 64
           LL E
Sbjct: 227 LLWE 230

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1   ILLDEDMVAHVSDFGISKLL-GDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK L  D +    QT     + + APE  +    S+K DV+S+G
Sbjct: 156 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 215
Query: 60  VLLMETFTR-KKPTDEM 75
           VL+ E F+  +KP   M
Sbjct: 216 VLMWEAFSYGQKPYRGM 232

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 170 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 229
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 230 LLWEIFS 236

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 175 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 235 LLWEIFS 241

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 229 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 288
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 289 LLWEIFS 295

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 181 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 240
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 241 LLWEIFS 247

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 224 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 283
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 284 LLWEIFS 290

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1   ILLDEDMVAHVSDFGISKLL-GDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK L  D +    QT     + + APE  +    S+K DV+S+G
Sbjct: 158 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 217
Query: 60  VLLMETFTR-KKPTDEM 75
           VL+ E F+  +KP   M
Sbjct: 218 VLMWEAFSYGQKPYRGM 234

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1   ILLDEDMVAHVSDFGISKLL-GDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK L  D +    QT     + + APE  +    S+K DV+S+G
Sbjct: 158 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 217
Query: 60  VLLMETFTR-KKPTDEM 75
           VL+ E F+  +KP   M
Sbjct: 218 VLMWEAFSYGQKPYRGM 234

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+   +V  ++DFG+++++ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 315 ILVSASLVCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGSFTIKSDVWSFGI 373
Query: 61  LLMETFT 67
           LLME  T
Sbjct: 374 LLMEIVT 380

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 222 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 281
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 282 LLWEIFS 288

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E+ VA ++DFG+S+     +  V +TM    + +MA E  +  + +T  DV+SYGV
Sbjct: 163 ILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 219
Query: 61  LLME 64
           LL E
Sbjct: 220 LLWE 223

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E+ VA ++DFG+S+     +  V +TM    + +MA E  +  + +T  DV+SYGV
Sbjct: 173 ILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 229
Query: 61  LLME 64
           LL E
Sbjct: 230 LLWE 233

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 231 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 290
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 291 LLWEIFS 297

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 216 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 275
Query: 61  LLMETFT 67
           LL E F+
Sbjct: 276 LLWEIFS 282

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 188 VLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 248 LMWEIFT 254

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 27/141 (19%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQT-MTMATIGYMAPEYGSEGIVSTKC-DVYSY 58
           IL+D +    + DFGI+K L +   S+TQT   + T+ Y +PE  ++G  + +C D+YS 
Sbjct: 142 ILIDSNKTLKIFDFGIAKALSET--SLTQTNHVLGTVQYFSPE-QAKGEATDECTDIYSI 198
Query: 59  GVLLMETFTRKKPTDEMFIGEMS------------------LRDWVNKSLSGELTQVIDA 100
           G++L E    + P    F GE +                  +R  + +SLS  + +  + 
Sbjct: 199 GIVLYEMLVGEPP----FNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEK 254
Query: 101 NLARDEQSFFVKMDCLSSIMH 121
           + A   ++     D LSS++H
Sbjct: 255 DKANRYKTIQEMKDDLSSVLH 275

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 248 LMWEIFT 254

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + APE  +    ++  DV+SYG
Sbjct: 162 ILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYG 221
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           +++ E          M  GE    D  N+        VI A    +       MDC  ++
Sbjct: 222 IVMWEV---------MSYGERPYWDMSNQD-------VIKA--IEEGYRLPPPMDCPIAL 263
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +    R
Sbjct: 264 HQLMLDCWQKERSDR 278

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 176 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 235
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 236 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 286
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
            C   I  +  +C   + +QR    D A ++ +I+++
Sbjct: 287 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 293
Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 294 LMWEIFT 300

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + APE  +    ++  DV+SYG
Sbjct: 147 ILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYG 206
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           +++ E          M  GE    D  N+        VI A    +       MDC  ++
Sbjct: 207 IVMWEV---------MSYGERPYWDMSNQD-------VIKA--IEEGYRLPPPMDCPIAL 248
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +    R
Sbjct: 249 HQLMLDCWQKERSDR 263

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 175 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 234
Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 235 LMWEIFT 241

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 143 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 202
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 203 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 253
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
            C   I  +  +C   + +QR    D A ++ +I+++
Sbjct: 254 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 290

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 248 LMWEIFT 254

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 199 LLTEIVTHGR 208

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 19/135 (14%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + APE  +    ++  DV+SYG
Sbjct: 141 ILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYG 200
Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           +++ E          M  GE    D  N+        VI A    +       MDC  ++
Sbjct: 201 IVMWEV---------MSYGERPYWDMSNQ-------DVIKA--IEEGYRLPPPMDCPIAL 242
Query: 120 MHLALDCCMESPDQR 134
             L LDC  +    R
Sbjct: 243 HQLMLDCWQKERSDR 257

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 177 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 236
Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 237 LMWEIFT 243

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 142 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 200
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 201 LLTEIVTHGR 210

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 141 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 199
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 200 LLTEIVTHGR 209

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 248 LMWEIFT 254

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 248 LMWEIFT 254

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 205 LLTEIVTHGR 214

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 248 LMWEIFT 254

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 180 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 239
Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 240 LMWEIFT 246

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 199 LLTEIVTHGR 208

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 248 LMWEIFT 254

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 148 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 207
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 208 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 258
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 259 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 149 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 207
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 208 LLTEIVTHGR 217

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ + +   +SD G+ + +   D       ++  I +MAPE    G  S   D++SYGV
Sbjct: 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 235
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           +L E F+              L+ +   S + ++ ++I     R+ Q      DC + + 
Sbjct: 236 VLWEVFS------------YGLQPYCGYS-NQDVVEMI-----RNRQVLPCPDDCPAWVY 277
Query: 121 HLALDCCMESPDQRIYMTDAAAKLK 145
            L ++C  E P +R    D  ++L+
Sbjct: 278 ALMIECWNEFPSRRPRFKDIHSRLR 302

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ V  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 162 LVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVL 220
Query: 62  LMETFT 67
           L E  T
Sbjct: 221 LWEIAT 226

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 199 LLTEIVTHGR 208

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 148 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 207
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 208 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 258
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 259 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 148 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 206
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 207 LLTEIVTHGR 216

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 151 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 210
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 211 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 261
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 262 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 297

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 150 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 209
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 210 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 260
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 261 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 296

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 149 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 208
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 209 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 259
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 260 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 295

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 145 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 204
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 205 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 255
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 256 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGD-DSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D + DSV  +T     + +MA E       +TK DV+S+G
Sbjct: 163 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 222
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 223 VLLWELMTRGAP 234

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 18/145 (12%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ + +   +SD G+ + +   D       ++  I +MAPE    G  S   D++SYGV
Sbjct: 159 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 218
Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           +L E F+          G      + N+ +           + R+ Q      DC + + 
Sbjct: 219 VLWEVFS---------YGLQPYCGYSNQDV---------VEMIRNRQVLPCPDDCPAWVY 260
Query: 121 HLALDCCMESPDQRIYMTDAAAKLK 145
            L ++C  E P +R    D  ++L+
Sbjct: 261 ALMIECWNEFPSRRPRFKDIHSRLR 285

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 152 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 211
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 212 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 262
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 263 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 298

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 163 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 222
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 223 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 273
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 274 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 309

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 145 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 204
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 205 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 255
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 256 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 163 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 222
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 223 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 273
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 274 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 309

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGD-DSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D + DSV  +T     + +MA E       +TK DV+S+G
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 224
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 225 VLLWELMTRGAP 236

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 148 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 207
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 208 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 258
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 259 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 144 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 203
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 204 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 254
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 255 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 290

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGD-DSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D + DSV  +T     + +MA E       +TK DV+S+G
Sbjct: 166 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 225
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 226 VLLWELMTRGAP 237

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D +       T A   + +MA E       +TK DV+S+G
Sbjct: 164 MLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 223
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 224 VLLWELMTRGAP 235

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGD-DSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D + DSV  +T     + +MA E       +TK DV+S+G
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 224
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 225 VLLWELMTRGAP 236

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E ++  ++DFG+++++ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 141 VLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGCFTIKSDVWSFGI 199
Query: 61  LLMETFTRKK 70
           LL E  T  K
Sbjct: 200 LLYEIVTYGK 209

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGD-DSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D + DSV  +T     + +MA E       +TK DV+S+G
Sbjct: 170 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 229
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 230 VLLWELMTRGAP 241

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 205 LLTEIVTHGR 214

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 145 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 203
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 204 LLTEIVTHGR 213

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGD-DSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D + DSV  +T     + +MA E       +TK DV+S+G
Sbjct: 166 MLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 225
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 226 VLLWELMTRGAP 237

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGD-DSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D + DSV  +T     + +MA E       +TK DV+S+G
Sbjct: 224 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 283
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 284 VLLWELMTRGAP 295

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 199 LLTEIVTHGR 208

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVT-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK LG  D   T ++     + + APE  +    S++ DV+SYG
Sbjct: 141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 200
Query: 60  VLLMETFTR-KKPTDEM 75
           V + E  +  +KP  +M
Sbjct: 201 VTMWEALSYGQKPYKKM 217

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 208 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 150 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 208
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 209 LLTEIVTHGR 218

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 141 LVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 199
Query: 62  LMETFT 67
           L E  T
Sbjct: 200 LWEIAT 205

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 135 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 193
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 194 LLTEIVTHGR 203

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D + +  +      I + APE  + G  + K DV+S+G+
Sbjct: 136 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGI 194
Query: 61  LLMETFTRKK 70
           LL E  T  +
Sbjct: 195 LLTEIVTHGR 204

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 144 LVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 202
Query: 62  LMETFT 67
           L E  T
Sbjct: 203 LWEIAT 208

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 188 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 198 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 148 LVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 62  LMETFT 67
           L E  T
Sbjct: 207 LWEIAT 212

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 182 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 182 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 173 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL    +  + DFG+++ + +  + V +      + +MAPE     + + + DV+SYG+
Sbjct: 199 ILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 258
Query: 61  LLMETFT 67
            L E F+
Sbjct: 259 FLWELFS 265

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 146 ILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 205
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 206 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 256
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 257 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 292

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 141 LVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 199
Query: 62  LMETFT 67
           L E  T
Sbjct: 200 LWEIAT 205

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 14/73 (19%)
Query: 2   LLDEDMVAHVSDFGISKLL-------GDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCD 54
           L+ E+MV  ++DFG+S+ +        DG+D++        I +M PE       +T+ D
Sbjct: 206 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIP-------IRWMPPESIFYNRYTTESD 258
Query: 55  VYSYGVLLMETFT 67
           V++YGV+L E F+
Sbjct: 259 VWAYGVVLWEIFS 271

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 148 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 62  LMETFT 67
           L E  T
Sbjct: 207 LWEIAT 212

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 199 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 145 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 62  LMETFT 67
           L E  T
Sbjct: 204 LWEIAT 209

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 18/134 (13%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+  +++  + DFG+S+ +   D       TM  I +M PE       +T+ DV+S+GV+
Sbjct: 165 LVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI 224
Query: 62  LMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMH 121
           L E FT  K            + W   S + E+ + I      +         C   +  
Sbjct: 225 LWEIFTYGK------------QPWFQLS-NTEVIECITQGRVLERPRV-----CPKEVYD 266
Query: 122 LALDCCMESPDQRI 135
           + L C    P QR+
Sbjct: 267 VMLGCWQREPQQRL 280

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 143 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 62  LMETFT 67
           L E  T
Sbjct: 202 LWEIAT 207

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 147 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 205
Query: 62  LMETFT 67
           L E  T
Sbjct: 206 LWEIAT 211

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 148 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 62  LMETFT 67
           L E  T
Sbjct: 207 LWEIAT 212

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 143 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 62  LMETFT 67
           L E  T
Sbjct: 202 LWEIAT 207

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 145 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 62  LMETFT 67
           L E  T
Sbjct: 204 LWEIAT 209

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 143 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 62  LMETFT 67
           L E  T
Sbjct: 202 LWEIAT 207

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 143 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 62  LMETFT 67
           L E  T
Sbjct: 202 LWEIAT 207

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 143 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 62  LMETFT 67
           L E  T
Sbjct: 202 LWEIAT 207

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D +       T A   + +MA E       +TK DV+S+G
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 224
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 225 VLLWELMTRGAP 236

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 143 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 62  LMETFT 67
           L E  T
Sbjct: 202 LWEIAT 207

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 156 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 214
Query: 62  LMETFT 67
           L E  T
Sbjct: 215 LWEIAT 220

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 148 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 62  LMETFT 67
           L E  T
Sbjct: 207 LWEIAT 212

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8   VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67
           VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E F+
Sbjct: 182 VAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D +       T A   + +MA E       +TK DV+S+G
Sbjct: 162 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 221
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 222 VLLWELMTRGAP 233

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 148 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 62  LMETFT 67
           L E  T
Sbjct: 207 LWEIAT 212

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D +       T A   + +MA E       +TK DV+S+G
Sbjct: 160 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 219
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 220 VLLWELMTRGAP 231

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D +       T A   + +MA E       +TK DV+S+G
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 224
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 225 VLLWELMTRGAP 236

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D +       T A   + +MA E       +TK DV+S+G
Sbjct: 164 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 223
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 224 VLLWELMTRGAP 235

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D +       T A   + +MA E       +TK DV+S+G
Sbjct: 184 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 243
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 244 VLLWELMTRGAP 255

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D +       T A   + +MA E       +TK DV+S+G
Sbjct: 157 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 216
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 217 VLLWELMTRGAP 228

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 1   ILLDEDMVAHVSDFGISKLLG-DGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L  D +    +    + I + APE  +E   S   DV+S+G
Sbjct: 145 ILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 204
Query: 60  VLLMETFT----RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKM 113
           V+L E FT     K P  E     M   D   + +   L +++  N  L R +       
Sbjct: 205 VVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD------- 255
Query: 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            C   I  +  +C   + +QR    D A ++ +I++
Sbjct: 256 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D +       T A   + +MA E       +TK DV+S+G
Sbjct: 163 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 222
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 223 VLLWELMTRGAP 234

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 141 LVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 199
Query: 62  LMETFT 67
           L E  T
Sbjct: 200 LWEIAT 205

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D +       T A   + +MA E       +TK DV+S+G
Sbjct: 183 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 242
Query: 60  VLLMETFTRKKP 71
           VLL E  TR  P
Sbjct: 243 VLLWELMTRGAP 254

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV+
Sbjct: 164 MVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 223
Query: 62  LMETFTRKKPTDEMFIGEMSLR 83
           L E  T  +   +    E  LR
Sbjct: 224 LWEIATLAEQPYQGLSNEQVLR 245

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV+
Sbjct: 155 MVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 214
Query: 62  LMETFTRKKPTDEMFIGEMSLR 83
           L E  T  +   +    E  LR
Sbjct: 215 LWEIATLAEQPYQGLSNEQVLR 236

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL    +  + DFG+++ + +  + V +      + +MAPE     + + + DV+SYG+
Sbjct: 192 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 251
Query: 61  LLMETFT 67
            L E F+
Sbjct: 252 FLWELFS 258

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL    +  + DFG+++ + +  + V +      + +MAPE     + + + DV+SYG+
Sbjct: 194 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 253
Query: 61  LLMETFT 67
            L E F+
Sbjct: 254 FLWELFS 260

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E ++  ++DFG+++++ D + +  +      I + APE  + G  + K +V+S+G+
Sbjct: 140 VLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGCFTIKSNVWSFGI 198
Query: 61  LLMETFTRKK 70
           LL E  T  K
Sbjct: 199 LLYEIVTYGK 208

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 144 LVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 202
Query: 62  LMETFT 67
           L E  T
Sbjct: 203 LWEIAT 208

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 145 LVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 62  LMETFT 67
           L E  T
Sbjct: 204 LWEIAT 209

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL    +  + DFG+++ + +  + V +      + +MAPE     + + + DV+SYG+
Sbjct: 199 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 258
Query: 61  LLMETFT 67
            L E F+
Sbjct: 259 FLWELFS 265

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL    +  + DFG+++ + +  + V +      + +MAPE     + + + DV+SYG+
Sbjct: 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 235
Query: 61  LLMETFT 67
            L E F+
Sbjct: 236 FLWELFS 242

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+++  + DFG+S+ +   D       TM  I +M PE       +T+ DV+S GV+
Sbjct: 160 LVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 219
Query: 62  LMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMH 121
           L E FT  K            + W   S +  +  +    + +  ++      C   +  
Sbjct: 220 LWEIFTYGK------------QPWYQLSNNEVIECITQGRVLQRPRT------CPQEVYE 261
Query: 122 LALDCCMESPDQR 134
           L L C    P  R
Sbjct: 262 LMLGCWQREPHMR 274

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1   ILLDEDMVAHVSDFGISKLL-GDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK L  D +    QT     + + APE  +    S+K DV+S+G
Sbjct: 500 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 559
Query: 60  VLLMETFTR-KKPTDEM 75
           VL+ E F+  +KP   M
Sbjct: 560 VLMWEAFSYGQKPYRGM 576

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1   ILLDEDMVAHVSDFGISKLL-GDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK L  D +    QT     + + APE  +    S+K DV+S+G
Sbjct: 501 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 560
Query: 60  VLLMETFTR-KKPTDEM 75
           VL+ E F+  +KP   M
Sbjct: 561 VLMWEAFSYGQKPYRGM 577

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTM-ATIGYMAPEYGSEGIVSTKCDVYSYG 59
           ILLDE+    ++DFG+SK   +  D   +  +   T+ YMAPE  +    S   D +SYG
Sbjct: 161 ILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYG 217
Query: 60  VLLMETFTRKKP 71
           VL+ E  T   P
Sbjct: 218 VLMFEMLTGSLP 229

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 350 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 408
Query: 62  LMETFT 67
           L E  T
Sbjct: 409 LWEIAT 414

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GVL
Sbjct: 389 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 447
Query: 62  LMETFT 67
           L E  T
Sbjct: 448 LWEIAT 453

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 7   MVAH-----VSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           MVAH     + DFG+++ + + D        +  + +MAPE   +G+ +T  D++S+GV+
Sbjct: 159 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 218
Query: 62  LME 64
           L E
Sbjct: 219 LWE 221

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 7   MVAH-----VSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           MVAH     + DFG+++ + + D        +  + +MAPE   +G+ +T  D++S+GV+
Sbjct: 162 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 62  LME 64
           L E
Sbjct: 222 LWE 224

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           +L +DM   V+DFG+SK +  GD      +    + ++A E  ++ + ++K DV+++GV 
Sbjct: 179 MLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT 238
Query: 62  LMETFTR 68
           + E  TR
Sbjct: 239 MWEIATR 245

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 7   MVAH-----VSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           MVAH     + DFG+++ + + D        +  + +MAPE   +G+ +T  D++S+GV+
Sbjct: 162 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 62  LME 64
           L E
Sbjct: 222 LWE 224

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVT-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK LG  D   T ++     + + APE  +    S++ DV+SYG
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526
Query: 60  VLLMETFTR-KKPTDEM 75
           V + E  +  +KP  +M
Sbjct: 527 VTMWEALSYGQKPYKKM 543

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV+
Sbjct: 163 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 222
Query: 62  LMETFTRKKPTDEMFIGEMSLR 83
           L E  T  +   +    E  LR
Sbjct: 223 LWEIATLAEQPYQGLSNEQVLR 244

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV+
Sbjct: 161 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 220
Query: 62  LMETFTRKKPTDEMFIGEMSLR 83
           L E  T  +   +    E  LR
Sbjct: 221 LWEIATLAEQPYQGLSNEQVLR 242

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV+
Sbjct: 160 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 219
Query: 62  LMETFTRKKPTDEMFIGEMSLR 83
           L E  T  +   +    E  LR
Sbjct: 220 LWEIATLAEQPYQGLSNEQVLR 241

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV+
Sbjct: 163 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 222
Query: 62  LMETFTRKKPTDEMFIGEMSLR 83
           L E  T  +   +    E  LR
Sbjct: 223 LWEIATLAEQPYQGLSNEQVLR 244

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV+
Sbjct: 170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 229
Query: 62  LMETFTRKKPTDEMFIGEMSLR 83
           L E  T  +   +    E  LR
Sbjct: 230 LWEIATLAEQPYQGLSNEQVLR 251

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV+
Sbjct: 164 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 223
Query: 62  LMETFTRKKPTDEMFIGEMSLR 83
           L E  T  +   +    E  LR
Sbjct: 224 LWEIATLAEQPYQGLSNEQVLR 245

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LDE     V+DFG+++ + D +    Q    A   + + A E       +TK DV+S+G
Sbjct: 156 MLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFG 215
Query: 60  VLLMETFTRKKPT 72
           VLL E  TR  P 
Sbjct: 216 VLLWELLTRGAPP 228

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV+
Sbjct: 192 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 251
Query: 62  LMETFTRKKPTDEMFIGEMSLR 83
           L E  T  +   +    E  LR
Sbjct: 252 LWEIATLAEQPYQGLSNEQVLR 273

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV+
Sbjct: 170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 229
Query: 62  LMETFTRKKPTDEMFIGEMSLR 83
           L E  T  +   +    E  LR
Sbjct: 230 LWEIATLAEQPYQGLSNEQVLR 251

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV+
Sbjct: 157 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 216
Query: 62  LMETFTRKKPTDEMFIGEMSLR 83
           L E  T  +   +    E  LR
Sbjct: 217 LWEIATLAEQPYQGLSNEQVLR 238

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVS-TKCDVYSYG 59
           +LLDE +   ++DFG+S ++ DG+   T   +  +  Y APE  S  + +  + DV+S G
Sbjct: 134 LLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEVISGKLYAGPEVDVWSCG 190
Query: 60  VLLMETFTRKKPTDE 74
           V+L     R+ P D+
Sbjct: 191 VILYVMLCRRLPFDD 205

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVS-TKCDVYSYG 59
           +LLDE +   ++DFG+S ++ DG+   T   +  +  Y APE  S  + +  + DV+S G
Sbjct: 144 LLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEVISGKLYAGPEVDVWSCG 200
Query: 60  VLLMETFTRKKPTDE 74
           V+L     R+ P D+
Sbjct: 201 VILYVMLCRRLPFDD 215

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           +L EDM   V+DFG+S+ +  GD       +   + ++A E  ++ + +   DV+++GV 
Sbjct: 169 MLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVT 228
Query: 62  LMETFTRKK 70
           + E  TR +
Sbjct: 229 MWEIMTRGQ 237

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVS-TKCDVYSYG 59
           +LLDE +   ++DFG+S ++ DG+   T   +  +  Y APE  S  + +  + DV+S G
Sbjct: 143 LLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEVISGKLYAGPEVDVWSCG 199
Query: 60  VLLMETFTRKKPTDE 74
           V+L     R+ P D+
Sbjct: 200 VILYVMLCRRLPFDD 214

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVS-TKCDVYSYG 59
           +LLDE +   ++DFG+S ++ DG+   T   +  +  Y APE  S  + +  + DV+S G
Sbjct: 138 LLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEVISGKLYAGPEVDVWSCG 194
Query: 60  VLLMETFTRKKPTDE 74
           V+L     R+ P D+
Sbjct: 195 VILYVMLCRRLPFDD 209

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 5   EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLME 64
           ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV+L E
Sbjct: 160 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 219
Query: 65  TFTRKKPTDEMFIGEMSLR 83
             T  +   +    E  LR
Sbjct: 220 IATLAEQPYQGLSNEQVLR 238

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           DE+    +SDFG+SK+ G GD     +    T GY+APE  ++   S   D +S GV+
Sbjct: 157 DEESKIMISDFGLSKMEGKGD---VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL+EDM   ++DFG +K+L            + T  Y++PE  +E   S   D+++ G 
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGC 222
Query: 61  LLME 64
           ++ +
Sbjct: 223 IIYQ 226

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 158 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 217
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 218 TVWELMTFGSKPYDGIPASEIS 239

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 149 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 208
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 209 TVWELMTFGSKPYDGIPASEIS 230

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 208 TVWELMTFGSKPYDGIPASEIS 229

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 208 TVWELMTFGSKPYDGIPASEIS 229

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 149 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 208
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 209 TVWELMTFGSKPYDGIPASEIS 230

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 208 TVWELMTFGSKPYDGIPASEIS 229

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 20/157 (12%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIG---YMAPEYGSE-GIVSTKCDVY 56
           ILL ED    ++DFG+S  L  G D     +    +G   +MAPE   +      K D++
Sbjct: 147 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 206
Query: 57  SYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCL 116
           S+G+  +E  T   P  +    ++ +    N   S E T V D  + +     F KM  L
Sbjct: 207 SFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE-TGVQDKEMLKKYGKSFRKMISL 265
Query: 117 SSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD 153
                    C  + P++R      AA+L  ++ KF  
Sbjct: 266 ---------CLQKDPEKR----PTAAEL--LRHKFFQ 287

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 208 TVWELMTFGSKPYDGIPASEIS 229

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 182 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 241
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 242 TVWELMTFGSKPYDGIPASEIS 263

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 151 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 210
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 211 TVWELMTFGSKPYDGIPASEIS 232

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 154 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 213
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 214 TVWELMTFGSKPYDGIPASEIS 235

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 142 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 201
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 202 TVWELMTFGSKPYDGIPASEIS 223

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 208 TVWELMTFGSKPYDGIPASEIS 229

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 150 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 209
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 210 TVWELMTFGSKPYDGIPASEIS 231

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 155 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 214
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 215 TVWELMTFGSKPYDGIPASEIS 236

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 151 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 210
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 211 TVWELMTFGSKPYDGIPASEIS 232

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 155 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 214
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 215 TVWELMTFGSKPYDGIPASEIS 236

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 150 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 209
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 210 TVWELMTFGSKPYDGIPASEIS 231

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 151 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 210
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 211 TVWELMTFGSKPYDGIPASEIS 232

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 152 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 211
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 212 TVWELMTFGSKPYDGIPASEIS 233

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 20/157 (12%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIG---YMAPEYGSE-GIVSTKCDVY 56
           ILL ED    ++DFG+S  L  G D     +    +G   +MAPE   +      K D++
Sbjct: 152 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 211
Query: 57  SYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCL 116
           S+G+  +E  T   P  +    ++ +    N   S E T V D  + +     F KM  L
Sbjct: 212 SFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE-TGVQDKEMLKKYGKSFRKMISL 270
Query: 117 SSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD 153
                    C  + P++R      AA+L  ++ KF  
Sbjct: 271 ---------CLQKDPEKR----PTAAEL--LRHKFFQ 292

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 151 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 210
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 211 TVWELMTFGSKPYDGIPASEIS 232

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 155 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 214
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 215 TVWELMTFGSKPYDGIPASEIS 236

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 145 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 204
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 205 TVWELMTFGSKPYDGIPASEIS 226

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 173 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 232
Query: 61  LLMETFT-RKKPTDEMFIGEMS 81
            + E  T   KP D +   E+S
Sbjct: 233 TVWELMTFGSKPYDGIPASEIS 254

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+++  V  VSDFG+S+ + D D+  +   +   + +  PE       S+K D++++GVL
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLD-DEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 210
Query: 62  LMETFTRKKPTDEMF 76
           + E ++  K   E F
Sbjct: 211 MWEIYSLGKMPYERF 225

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)
Query: 6   DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMET 65
           + +  ++DFG+++         T+        +MAPE     + S   DV+SYGVLL E 
Sbjct: 152 NKILKITDFGLAREW----HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWEL 207
Query: 66  FTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALD 125
            T          GE+  R        G     +   +A ++ +  +   C      L  D
Sbjct: 208 LT----------GEVPFR--------GIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMED 249
Query: 126 CCMESPDQRIYMTDAAAKLKKI 147
           C    P  R   T+   +L  I
Sbjct: 250 CWNPDPHSRPSFTNILDQLTTI 271

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 2   LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL 61
           L+++  V  VSDFG+S+ + D D+  +   +   + +  PE       S+K D++++GVL
Sbjct: 136 LVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 194
Query: 62  LMETFTRKKPTDEMF 76
           + E ++  K   E F
Sbjct: 195 MWEIYSLGKMPYERF 209

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	159
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	7e-37
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	7e-35
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-34
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-25
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-22
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-22
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	9e-22
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-20
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-20
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	9e-20
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-19
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-18
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-18
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-17
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-17
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	6e-17
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-15
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-15
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-15
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-14
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-14
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-14
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-14
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	5e-14
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	7e-14
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-13
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-13
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-13
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-13
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-13
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-13
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-13
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	5e-13
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	9e-13
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-12
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-12
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-12
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-12
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-12
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	5e-12
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	5e-12
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	6e-12
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	6e-12
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	6e-12
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-12
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	8e-12
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	8e-12
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	9e-12
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-11
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-11
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-11
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-11
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-11
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-11
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-11
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-11
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-11
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-11
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-11
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-11
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-11
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-11
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-11
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-11
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-11
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	6e-11
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	6e-11
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	8e-11
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	9e-11
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-10
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-10
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-10
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-10
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-10
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	8e-10
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-09
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-09
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-09
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	8e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	8e-09
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-08
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-08
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-08
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-08
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	4e-08
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-07
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-07
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-07
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-07
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-07
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-07
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-07
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-07
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	6e-07
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-06
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-06
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-06
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-06
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-06
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	5e-06
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-06
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	8e-06
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	9e-06
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-05
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-05
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-05
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-05
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-05
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-05
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-05
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-05
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-05
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-05
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-05
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-05
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-05
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-05
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	4e-05
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	5e-05
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	5e-05
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	7e-05
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	8e-05
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-04
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-04
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-04
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-04
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-04
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-04
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-04
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	4e-04
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	5e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	6e-04
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	6e-04
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	6e-04
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	6e-04
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	6e-04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	6e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	7e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-04
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	7e-04
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	8e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	9e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  128 bits (323), Expect = 7e-37
 Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 7/147 (4%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLDE+ V  ++DFGISK   + D +   T+   T+GY+ PEY  +G ++ K DVYS+GV
Sbjct: 170 ILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGV 229

Query: 61  LLMETFTRKKPTDEMF-IGEMSLRDWVNKSL-SGELTQVIDANLARDEQSFFVKMDCLSS 118
           +L E    +    +      ++L +W  +S  +G+L Q++D NLA       ++ + L  
Sbjct: 230 VLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK-----IRPESLRK 284

Query: 119 IMHLALDCCMESPDQRIYMTDAAAKLK 145
               A+ C   S + R  M D   KL+
Sbjct: 285 FGDTAVKCLALSSEDRPSMGDVLWKLE 311

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  122 bits (309), Expect = 7e-35
 Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 10/149 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLDE+  A V DFG++KL+   D  VT T    TIG++APEY S G  S K DV+ YGV
Sbjct: 165 ILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGV 223

Query: 61  LLMETFTRKKPTDEMFIGE---MSLRDWVNKSL-SGELTQVIDANLARDEQSFFVKMDCL 116
           +L+E  T ++  D   +     + L DWV   L   +L  ++D +L  +      K + +
Sbjct: 224 MLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGN-----YKDEEV 278

Query: 117 SSIMHLALDCCMESPDQRIYMTDAAAKLK 145
             ++ +AL C   SP +R  M++    L+
Sbjct: 279 EQLIQVALLCTQSSPMERPKMSEVVRMLE 307

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  120 bits (303), Expect = 4e-34
 Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 10/149 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLDE   A +SDFG+++       +V  +  + T  YMAPE    G ++ K D+YS+GV
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGV 222

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLS--GELTQVIDANLARDEQSFFVKMDCLSS 118
           +L+E  T     DE       L D   +       +   ID  +   + +    M     
Sbjct: 223 VLLEIITGLPAVDEHR-EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAM----- 276

Query: 119 IMHLALDCCMESPDQRIYMTDAAAKLKKI 147
              +A  C  E  ++R  +      L+++
Sbjct: 277 -YSVASQCLHEKKNKRPDIKKVQQLLQEM 304

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 97.5 bits (243), Expect = 3e-25
 Identities = 28/157 (17%), Positives = 64/157 (40%), Gaps = 8/157 (5%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI-----VSTKCDV 55
           +LL  ++ A ++DFG++     G  +      + T  YMAPE     I        + D+
Sbjct: 162 VLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDM 221

Query: 56  YSYGVLLMETFTRKKPTDEMFIG-EMSLRDWVNKSLSGE-LTQVIDANLARDE-QSFFVK 112
           Y+ G++L E  +R    D       +   + + +  S E + +V+     R   + ++ K
Sbjct: 222 YAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQK 281

Query: 113 MDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
              ++ +     +C     + R+       ++ +++ 
Sbjct: 282 HAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 88.5 bits (220), Expect = 4e-22
 Identities = 31/153 (20%), Positives = 62/153 (40%), Gaps = 17/153 (11%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE---YGSEGIVSTKCDVYS 57
           I L ED    + DFG++        S        +I +MAPE          S + DVY+
Sbjct: 151 IFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYA 210

Query: 58  YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLS 117
           +G++L E  T + P             + N +   ++ +++       + S  V+ +C  
Sbjct: 211 FGIVLYELMTGQLP-------------YSNINNRDQIIEMVGRGSLSPDLS-KVRSNCPK 256

Query: 118 SIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
            +  L  +C  +  D+R       A+++++  +
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRILAEIEELARE 289

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 87.8 bits (218), Expect = 9e-22
 Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 27/154 (17%)

Query: 1   ILLDEDM-VAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPEYGSEGIVSTKCDVYS 57
           +LL     V  + DFG +         +   MT    +  +MAPE       S KCDV+S
Sbjct: 136 LLLVAGGTVLKICDFGTACD-------IQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFS 188

Query: 58  YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLS 117
           +G++L E  TR+KP DE+      +   V+      L +                 +   
Sbjct: 189 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIK-----------------NLPK 231

Query: 118 SIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151
            I  L   C  + P QR  M +    +  +   F
Sbjct: 232 PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 85.1 bits (211), Expect = 1e-20
 Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 20/159 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+D+     V DFG+S+L      S        T  +MAPE   +   + K DVYS+GV
Sbjct: 170 LLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--GTPEWMAPEVLRDEPSNEKSDVYSFGV 227

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           +L E  T ++P   +                    QV+ A +    +   +  +    + 
Sbjct: 228 ILWELATLQQPWGNL-----------------NPAQVVAA-VGFKCKRLEIPRNLNPQVA 269

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDVASTN 159
            +   C    P +R         L+ + +  +     ++
Sbjct: 270 AIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRSD 308

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 82.4 bits (204), Expect = 9e-20
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 34/157 (21%)

Query: 1   ILLDE-----DMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPE--YGSEGIVST 51
           I L        + A V+DFG+S+           +++       +MAPE     E   + 
Sbjct: 155 IFLQSLDENAPVCAKVADFGLSQQ-------SVHSVSGLLGNFQWMAPETIGAEEESYTE 207

Query: 52  KCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWV-NKSLSGELTQVIDANLARDEQSFF 110
           K D YS+ ++L    T + P DE   G++   + +  + L   + +              
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE-------------- 253

Query: 111 VKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147
              DC   + ++   C    P +R + +    +L ++
Sbjct: 254 ---DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 81.9 bits (203), Expect = 9e-20
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 28/153 (18%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE---YGSEGIVSTKCDVYS 57
           +++DEDM A +S   +         S      M    ++APE      E       D++S
Sbjct: 144 VMIDEDMTARISMADVKF-------SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWS 196

Query: 58  YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLS 117
           + VLL E  TR+ P  ++   E+ +             +V    L R      +      
Sbjct: 197 FAVLLWELVTREVPFADLSNMEIGM-------------KVALEGL-RPT----IPPGISP 238

Query: 118 SIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
            +  L   C  E P +R         L+K+++K
Sbjct: 239 HVSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 80.8 bits (200), Expect = 4e-19
 Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 29/162 (17%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA------------TIGYMAPEYGSEGI 48
            L+ E+    V+DFG+++L+ D         ++                +MAPE  +   
Sbjct: 139 CLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRS 198

Query: 49  VSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQS 108
              K DV+S+G++L E   R     +                      +      R    
Sbjct: 199 YDEKVDVFSFGIVLCEIIGRVNADPDY-----------------LPRTMDFGLNVRGFLD 241

Query: 109 FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
            +   +C  S   + + CC   P++R         L+ ++  
Sbjct: 242 RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 79.3 bits (196), Expect = 1e-18
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 31/162 (19%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA---TIGYMAPE---------YGSEGI 48
           +  D   V  ++DFG+  + G       +         + ++APE            +  
Sbjct: 161 VFYDNGKV-VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLP 219

Query: 49  VSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQS 108
            S   DV++ G +  E   R+ P                         +I   +    + 
Sbjct: 220 FSKHSDVFALGTIWYELHAREWPFKTQ-----------------PAEAIIWQ-MGTGMKP 261

Query: 109 FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
              ++     I  + L C     ++R   T     L+K+ ++
Sbjct: 262 NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 79.4 bits (196), Expect = 2e-18
 Identities = 30/161 (18%), Positives = 58/161 (36%), Gaps = 14/161 (8%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPE------YGSEGIVSTK 52
           IL+ ++    ++D G++       + V         T  YM PE        +       
Sbjct: 173 ILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIM 232

Query: 53  CDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQ----S 108
            D+YS+G++L E   R      +   ++   D V    S E   + +    +  +    +
Sbjct: 233 ADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYE--DMREIVCIKKLRPSFPN 290

Query: 109 FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            +   +CL  +  L  +C   +P  R+        L K+ E
Sbjct: 291 RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 75.5 bits (186), Expect = 4e-17
 Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 10/157 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPE------YGSEGIVSTK 52
           IL+ ++    ++D G++ +     + +         T  YMAPE               +
Sbjct: 144 ILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR 203

Query: 53  CDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQ--VIDANLARDEQSFF 110
            D++++G++L E   R      +   +    D V    S E  +  V       +  + +
Sbjct: 204 VDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRW 263

Query: 111 VKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147
                L+S+  L  +C  ++P  R+        L KI
Sbjct: 264 FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 75.6 bits (186), Expect = 4e-17
 Identities = 32/166 (19%), Positives = 67/166 (40%), Gaps = 19/166 (11%)

Query: 1   ILLDEDMVAHVSDFGISKLL------GDGDDSVTQTMTMATIGYMAPEYGSEGI------ 48
           +L+  D    +SDFG+S  L        G++       + TI YMAPE     +      
Sbjct: 151 VLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXE 210

Query: 49  -VSTKCDVYSYGVLLMETFTRKK---PTDEMFIGEMSLRDWVNKSLSGE-LTQVIDANLA 103
               + D+Y+ G++  E F R     P + +   +M+ +  V    + E +  ++     
Sbjct: 211 SALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQ 270

Query: 104 RDE--QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147
           R +  +++      + S+     DC  +  + R+    A  ++ ++
Sbjct: 271 RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 74.6 bits (184), Expect = 6e-17
 Identities = 35/156 (22%), Positives = 57/156 (36%), Gaps = 32/156 (20%)

Query: 1   ILLDEDMVAH--------VSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVST 51
           IL+ + +           ++DFG+++         T  M+ A    +MAPE     + S 
Sbjct: 139 ILILQKVENGDLSNKILKITDFGLAREWHR-----TTKMSAAGAYAWMAPEVIRASMFSK 193

Query: 52  KCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV 111
             DV+SYGVLL E  T + P   +                 +   V    +A ++ +  +
Sbjct: 194 GSDVWSYGVLLWELLTGEVPFRGI-----------------DGLAVAYG-VAMNKLALPI 235

Query: 112 KMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147
              C      L  DC    P  R   T+   +L  I
Sbjct: 236 PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 71.5 bits (176), Expect = 1e-15
 Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 32/157 (20%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ E  V  +SDFG+S+   DG  + +  +    + + APE  + G  S++ DV+S+G+
Sbjct: 244 CLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGI 303

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDC----- 115
           LL ETF+          G     +  N+       Q  +  + +       ++ C     
Sbjct: 304 LLWETFSL---------GASPYPNLSNQ-------QTREF-VEKGG-----RLPCPELCP 341

Query: 116 --LSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
             +  +M     C    P QR   +    +L+ I+++
Sbjct: 342 DAVFRLM---EQCWAYEPGQRPSFSTIYQELQSIRKR 375

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 69.6 bits (171), Expect = 5e-15
 Identities = 33/135 (24%), Positives = 51/135 (37%), Gaps = 20/135 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207

Query: 61  LLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
            + E  T   KP    + G +   +  +    GE          R  Q       C   +
Sbjct: 208 TVWELMTFGSKP----YDG-IPASEISSILEKGE----------RLPQP----PICTIDV 248

Query: 120 MHLALDCCMESPDQR 134
             +   C M   D R
Sbjct: 249 YMIMRKCWMIDADSR 263

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 68.6 bits (168), Expect = 1e-14
 Identities = 26/159 (16%), Positives = 57/159 (35%), Gaps = 10/159 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPE------YGSEGIVSTK 52
           IL+ ++    ++D G++       D++         T  YMAPE               +
Sbjct: 178 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 237

Query: 53  CDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLS-GELTQVIDANLAR-DEQSFF 110
            D+Y+ G++  E   R          ++   D V    S  E+ +V+     R +  + +
Sbjct: 238 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW 297

Query: 111 VKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
              + L  +  +  +C   +   R+        L ++ +
Sbjct: 298 QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 67.4 bits (165), Expect = 3e-14
 Identities = 33/135 (24%), Positives = 51/135 (37%), Gaps = 20/135 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207

Query: 61  LLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
            + E  T   KP D +        +  +    GE          R  Q       C   +
Sbjct: 208 TVWELMTFGSKPYDGI-----PASEISSILEKGE----------RLPQP----PICTIDV 248

Query: 120 MHLALDCCMESPDQR 134
             + + C M   D R
Sbjct: 249 YMIMVKCWMIDADSR 263

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 67.3 bits (165), Expect = 3e-14
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 7/80 (8%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQT-MTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL+  D  A++ DFGI+    D    +TQ   T+ T+ YMAPE  SE   + + D+Y+  
Sbjct: 165 ILVSADDFAYLVDFGIASATTDE--KLTQLGNTVGTLYYMAPERFSESHATYRADIYALT 222

Query: 60  VLLMETFTRKKPTDEMFIGE 79
            +L E  T   P    + G+
Sbjct: 223 CVLYECLTGSPP----YQGD 238

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 67.7 bits (165), Expect = 4e-14
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 21/136 (15%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK LG  D     ++     + + APE  +    S++ DV+SYG
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526

Query: 60  VLLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSS 118
           V + E  +  +KP       +M   + +     G+          R E       +C   
Sbjct: 527 VTMWEALSYGQKP-----YKKMKGPEVMAFIEQGK----------RMEC----PPECPPE 567

Query: 119 IMHLALDCCMESPDQR 134
           +  L  DC +   + R
Sbjct: 568 LYALMSDCWIYKWEDR 583

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 66.5 bits (163), Expect = 5e-14
 Identities = 31/135 (22%), Positives = 47/135 (34%), Gaps = 18/135 (13%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL    +  + DFG+ + L   DD  V Q        + APE       S   D + +G
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 211

Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           V L E FT          G+             ++   ID    R  +      DC   I
Sbjct: 212 VTLWEMFTY---------GQEPWIGLNGS----QILHKIDKEGERLPR----PEDCPQDI 254

Query: 120 MHLALDCCMESPDQR 134
            ++ + C    P+ R
Sbjct: 255 YNVMVQCWAHKPEDR 269

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 66.1 bits (162), Expect = 7e-14
 Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 21/136 (15%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK L   ++    QT     + + APE  +    S+K DV+S+G
Sbjct: 148 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 207

Query: 60  VLLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSS 118
           VL+ E F+  +KP        M   +       GE          R          C   
Sbjct: 208 VLMWEAFSYGQKP-----YRGMKGSEVTAMLEKGE----------RMGC----PAGCPRE 248

Query: 119 IMHLALDCCMESPDQR 134
           +  L   C     + R
Sbjct: 249 MYDLMNLCWTYDVENR 264

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 66.4 bits (162), Expect = 1e-13
 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D ++   +      I + APE    G  + K DV+S+G+
Sbjct: 394 ILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 452

Query: 61  LLMETFT 67
           LL E  T
Sbjct: 453 LLTELTT 459

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 65.3 bits (160), Expect = 1e-13
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 21/136 (15%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK LG  D     ++     + + APE  +    S++ DV+SYG
Sbjct: 141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 200

Query: 60  VLLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSS 118
           V + E  +  +KP       +M   + +     G+          R E       +C   
Sbjct: 201 VTMWEALSYGQKP-----YKKMKGPEVMAFIEQGK----------RMEC----PPECPPE 241

Query: 119 IMHLALDCCMESPDQR 134
           +  L  DC +   + R
Sbjct: 242 LYALMSDCWIYKWEDR 257

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 20/135 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LL       V+DFG++ LL   D  +  +     I +MA E    G  + + DV+SYGV
Sbjct: 146 VLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGV 205

Query: 61  LLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
            + E  T   +P   +      L +  +    GE          R  Q       C   +
Sbjct: 206 TVWELMTFGAEPYAGL-----RLAEVPDLLEKGE----------RLAQP----QICTIDV 246

Query: 120 MHLALDCCMESPDQR 134
             + + C M   + R
Sbjct: 247 YMVMVKCWMIDENIR 261

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 11/138 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    ++DFG++KLL    D  V +    + I + APE  S+ I S + DV+S+G
Sbjct: 158 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 217

Query: 60  VLLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKMDCL 116
           V+L E FT   K           +    +      L ++++    L            C 
Sbjct: 218 VVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPP-------ACP 270

Query: 117 SSIMHLALDCCMESPDQR 134
           + +  L   C   SP  R
Sbjct: 271 AEVHELMKLCWAPSPQDR 288

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 65.1 bits (159), Expect = 2e-13
 Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 11/155 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LLD D +  + DFG++K + +G +    +    + + + APE   E       DV+S+G
Sbjct: 165 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFG 224

Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSG-ELTQVIDAN--LARDEQSFFVKMDCL 116
           V L E  T    +       + L       ++   LT++++    L R +        C 
Sbjct: 225 VTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPD-------KCP 277

Query: 117 SSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151
           + + HL  +C       R    +    LK + EK+
Sbjct: 278 AEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 65.1 bits (159), Expect = 2e-13
 Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 14/157 (8%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L    +    +    + I + APE  +E   S   DV+S+G
Sbjct: 176 ILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 235

Query: 60  VLLMETFT---RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKMD 114
           V+L E FT   + K     F+  +         +   L +++  N  L R +        
Sbjct: 236 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF-HLIELLKNNGRLPRPD-------G 287

Query: 115 CLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151
           C   I  +  +C   + +QR    D A ++ +I+++ 
Sbjct: 288 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQT-MTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           I++       V DFGI++ + D  +SVTQT   + T  Y++PE      V  + DVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206

Query: 60  VLLMETFTRKKPTDEMFIGE 79
            +L E  T + P    F G+
Sbjct: 207 CVLYEVLTGEPP----FTGD 222

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 14/157 (8%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ +    + DFG++K+L    +    +    + I + APE  +E   S   DV+S+G
Sbjct: 145 ILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 204

Query: 60  VLLMETFT---RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKMD 114
           V+L E FT   + K     F+  +         +   L +++  N  L R +        
Sbjct: 205 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF-HLIELLKNNGRLPRPD-------G 256

Query: 115 CLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151
           C   I  +  +C   + +QR    D A ++ +I++  
Sbjct: 257 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 11/138 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +L++ +    + DFG++K +    +    +    + + + APE   +       DV+S+G
Sbjct: 157 VLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFG 216

Query: 60  VLLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDAN--LARDEQSFFVKMDCL 116
           V L E  T     +  M +    +     +     L   +     L           +C 
Sbjct: 217 VTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC-------PPNCP 269

Query: 117 SSIMHLALDCCMESPDQR 134
             +  L   C    P  R
Sbjct: 270 DEVYQLMRKCWEFQPSNR 287

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 64.4 bits (157), Expect = 5e-13
 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D ++   +      I + APE    G  + K DV+S+G+
Sbjct: 311 ILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 369

Query: 61  LLMETFT 67
           LL E  T
Sbjct: 370 LLTELTT 376

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 63.5 bits (155), Expect = 9e-13
 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 29/140 (20%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+ ++L D  ++  T       I + +PE  +    ++  DV+SYG
Sbjct: 178 ILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237

Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDA-----NLARDEQSFFVKMD 114
           ++L E  +          GE    +  N+        VI A      L          MD
Sbjct: 238 IVLWEVMSY---------GERPYWEMSNQ-------DVIKAVDEGYRLPP-------PMD 274

Query: 115 CLSSIMHLALDCCMESPDQR 134
           C +++  L LDC  +  + R
Sbjct: 275 CPAALYQLMLDCWQKDRNNR 294

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 62.5 bits (152), Expect = 2e-12
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ E+ +  V+DFG+S+L+   D           I + APE  +    S K DV+++GV
Sbjct: 349 CLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 407

Query: 61  LLMETFT 67
           LL E  T
Sbjct: 408 LLWEIAT 414

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 62.6 bits (152), Expect = 2e-12
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 21/135 (15%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+  +    + DFG+S+ + D       +     I +MAPE  +    ++  DV+ +GV
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 580

Query: 61  LLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
            + E      KP    F G +   D + +  +GE          R         +C  ++
Sbjct: 581 CMWEILMHGVKP----FQG-VKNNDVIGRIENGE----------RLPMP----PNCPPTL 621

Query: 120 MHLALDCCMESPDQR 134
             L   C    P +R
Sbjct: 622 YSLMTKCWAYDPSRR 636

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 62.4 bits (152), Expect = 2e-12
 Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+   +V  ++DFG+++++ D ++   +      I + APE  + G  + K DV+S+G+
Sbjct: 315 ILVSASLVCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGI 373

Query: 61  LLMETFT 67
           LLME  T
Sbjct: 374 LLMEIVT 380

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 61.9 bits (151), Expect = 2e-12
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +L+D ++V  VSDFG+S++L D  D+  T T     I + APE  +    S+  DV+S+G
Sbjct: 182 VLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG 241

Query: 60  VLLMETFTR-KKPTDEM 75
           V++ E     ++P   M
Sbjct: 242 VVMWEVLAYGERPYWNM 258

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 62.1 bits (151), Expect = 3e-12
 Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 22/157 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMAT--IGYMAPEYGSEGIVSTKCDVYSY 58
            +LDE     V+DFG+++ + D +       T A   + +MA E       +TK DV+S+
Sbjct: 223 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 282

Query: 59  GVLLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLS 117
           GVLL E  TR   P    +   ++  D     L G           R  Q       C  
Sbjct: 283 GVLLWELMTRGAPP----YPD-VNTFDITVYLLQGR----------RLLQP----EYCPD 323

Query: 118 SIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD 154
            +  + L C     + R   ++  +++  I   F+ +
Sbjct: 324 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 61.1 bits (149), Expect = 4e-12
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ E+ V  VSDFG+++ + D D   + T T   + + +PE  S    S+K DV+S+GV
Sbjct: 135 CLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 193

Query: 61  LLMETFTR-KKPTDEM 75
           L+ E F+  K P +  
Sbjct: 194 LMWEVFSEGKIPYENR 209

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 61.1 bits (149), Expect = 5e-12
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 7/80 (8%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQT-MTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL+D +    + DFGI+K L +   S+TQT   + T+ Y +PE           D+YS G
Sbjct: 142 ILIDSNKTLKIFDFGIAKALSE--TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIG 199

Query: 60  VLLMETFTRKKPTDEMFIGE 79
           ++L E    + P    F GE
Sbjct: 200 IVLYEMLVGEPP----FNGE 215

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 61.1 bits (149), Expect = 5e-12
 Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+++  V  VSDFG+S+ + D D+  +   +   + +  PE       S+K D++++GV
Sbjct: 151 CLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGV 209

Query: 61  LLMETFT 67
           L+ E ++
Sbjct: 210 LMWEIYS 216

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 61.2 bits (149), Expect = 6e-12
 Identities = 20/68 (29%), Positives = 37/68 (54%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            +L EDM   V+DFG+S+ +  GD       +   + ++A E  ++ + +   DV+++GV
Sbjct: 168 CMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGV 227

Query: 61  LLMETFTR 68
            + E  TR
Sbjct: 228 TMWEIMTR 235

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 61.1 bits (149), Expect = 6e-12
 Identities = 20/67 (29%), Positives = 39/67 (58%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LL    VA + DFG+++ + +  + + +      + +MAPE   + + + + DV+SYG+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254

Query: 61  LLMETFT 67
           LL E F+
Sbjct: 255 LLWEIFS 261

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 61.2 bits (148), Expect = 6e-12
 Identities = 15/118 (12%), Positives = 36/118 (30%), Gaps = 21/118 (17%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEY----------GSEGIVS 50
           I+LD+     ++ F      G         ++    G+  PE               +++
Sbjct: 242 IVLDQRGGVFLTGFEHLVRDGAS------AVSPIGRGFAPPETTAERMLPFGQHHPTLMT 295

Query: 51  TKCDVYSYGVLLMETFTRKKP---TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
              D ++ G+ +   +    P      +   E   R   N  +   +  +++  L   
Sbjct: 296 FAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKN--IPQPVRALLEGFLRYP 351

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 60.8 bits (148), Expect = 8e-12
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 293

Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 294 LMWEIFT 300

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 60.8 bits (148), Expect = 8e-12
 Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 2/77 (2%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM-TMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++   T      I + APE  S    ++  DV+S+G
Sbjct: 178 ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFG 237

Query: 60  VLLMETFTR-KKPTDEM 75
           +++ E  T  ++P  E+
Sbjct: 238 IVMWEVMTYGERPYWEL 254

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 60.7 bits (147), Expect = 8e-12
 Identities = 23/67 (34%), Positives = 38/67 (56%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 224 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 283

Query: 61  LLMETFT 67
           LL E F+
Sbjct: 284 LLWEIFS 290

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 60.8 bits (148), Expect = 9e-12
 Identities = 24/67 (35%), Positives = 39/67 (58%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GV
Sbjct: 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 281

Query: 61  LLMETFT 67
           LL E FT
Sbjct: 282 LLWEIFT 288

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 59.9 bits (146), Expect = 1e-11
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 21/135 (15%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+  +    + DFG+S+ + D       +     I +MAPE  +    ++  DV+ +GV
Sbjct: 147 VLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 205

Query: 61  LLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
            + E      KP    F G +   D + +  +GE          R         +C  ++
Sbjct: 206 CMWEILMHGVKP----FQG-VKNNDVIGRIENGE----------RLPMP----PNCPPTL 246

Query: 120 MHLALDCCMESPDQR 134
             L   C    P +R
Sbjct: 247 YSLMTKCWAYDPSRR 261

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 60.4 bits (147), Expect = 1e-11
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ E+ V  ++DFG+++ + + D     T     + +MAPE   + + + + DV+S+GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247

Query: 61  LLMETFT 67
           L+ E FT
Sbjct: 248 LMWEIFT 254

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 60.0 bits (146), Expect = 1e-11
 Identities = 21/68 (30%), Positives = 39/68 (57%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            +L +DM   V+DFG+SK +  GD      +    + ++A E  ++ + ++K DV+++GV
Sbjct: 178 CMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGV 237

Query: 61  LLMETFTR 68
            + E  TR
Sbjct: 238 TMWEIATR 245

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 60.0 bits (146), Expect = 1e-11
 Identities = 23/67 (34%), Positives = 38/67 (56%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 179 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238

Query: 61  LLMETFT 67
           LL E F+
Sbjct: 239 LLWEIFS 245

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 59.9 bits (146), Expect = 1e-11
 Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D ++   +      I + APE  + G  + K DV+S+G+
Sbjct: 140 ILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 198

Query: 61  LLMETFT 67
           LL E  T
Sbjct: 199 LLTEIVT 205

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 60.0 bits (146), Expect = 1e-11
 Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E+ VA ++DFG+S+     +  V +TM    + +MA E  +  + +T  DV+SYGV
Sbjct: 173 ILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 229

Query: 61  LLMETFT 67
           LL E  +
Sbjct: 230 LLWEIVS 236

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 60.0 bits (146), Expect = 2e-11
 Identities = 19/67 (28%), Positives = 36/67 (53%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL    +  + DFG+++ + +  + V +      + +MAPE     + + + DV+SYG+
Sbjct: 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 235

Query: 61  LLMETFT 67
            L E F+
Sbjct: 236 FLWELFS 242

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 59.6 bits (145), Expect = 2e-11
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMAT--IGYMAPEYGSEGIVSTKCDVYSY 58
            +LDE     V+DFG+++ + D +    Q    A   + + A E       +TK DV+S+
Sbjct: 155 CMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSF 214

Query: 59  GVLLMETFTR 68
           GVLL E  TR
Sbjct: 215 GVLLWELLTR 224

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+       + DFG+S+ + D +D    ++T   I +M+PE  +    +T  DV+ + V
Sbjct: 144 ILVASPECVKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202

Query: 61  LLMETFTR-KKPTDEM 75
            + E  +  K+P   +
Sbjct: 203 CMWEILSFGKQPFFWL 218

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 59.6 bits (145), Expect = 2e-11
 Identities = 19/68 (27%), Positives = 37/68 (54%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV
Sbjct: 169 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV 228

Query: 61  LLMETFTR 68
           +L E  T 
Sbjct: 229 VLWEIATL 236

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 59.2 bits (144), Expect = 2e-11
 Identities = 22/67 (32%), Positives = 36/67 (53%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ E+MV  ++DFG+S+ +   D           I +M PE       +T+ DV++YGV
Sbjct: 205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGV 264

Query: 61  LLMETFT 67
           +L E F+
Sbjct: 265 VLWEIFS 271

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 59.2 bits (144), Expect = 2e-11
 Identities = 24/67 (35%), Positives = 39/67 (58%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E     +SDFG+S+ + + D  V ++     + +MA E   + I +T+ DV+S+GV
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240

Query: 61  LLMETFT 67
           LL E  T
Sbjct: 241 LLWEIVT 247

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 58.7 bits (143), Expect = 2e-11
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+D D+   VSDFG+++ + D D  V+   T   + + APE       S+K DV+++G+
Sbjct: 135 CLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGI 193

Query: 61  LLMETFT 67
           L+ E F+
Sbjct: 194 LMWEVFS 200

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 59.2 bits (144), Expect = 3e-11
 Identities = 22/67 (32%), Positives = 36/67 (53%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+  +++  + DFG+S+ +   D       TM  I +M PE       +T+ DV+S+GV
Sbjct: 164 CLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV 223

Query: 61  LLMETFT 67
           +L E FT
Sbjct: 224 ILWEIFT 230

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 59.3 bits (144), Expect = 3e-11
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 5/67 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED VA VSDFG++K     + S TQ      + + APE   E   STK DV+S+G+
Sbjct: 320 VLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGI 374

Query: 61  LLMETFT 67
           LL E ++
Sbjct: 375 LLWEIYS 381

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 58.8 bits (143), Expect = 3e-11
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ + +   +SD G+ + +   D       ++  I +MAPE    G  S   D++SYGV
Sbjct: 159 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 218

Query: 61  LLMETFT 67
           +L E F+
Sbjct: 219 VLWEVFS 225

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 58.5 bits (142), Expect = 4e-11
 Identities = 23/67 (34%), Positives = 38/67 (56%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+    V  + DFG+++ +    + V +      + +MAPE   EGI + K DV+SYG+
Sbjct: 203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGI 262

Query: 61  LLMETFT 67
           LL E F+
Sbjct: 263 LLWEIFS 269

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 58.0 bits (141), Expect = 6e-11
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ E+ +  V+DFG+S+L+   D           I + APE  +    S K DV+++GV
Sbjct: 142 CLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 200

Query: 61  LLMETFTR 68
           LL E  T 
Sbjct: 201 LLWEIATY 208

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 58.0 bits (141), Expect = 6e-11
 Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 22/150 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMAT--IGYMAPEYGSEGIVSTKCDVYSY 58
            +LDE     V+DFG+++ + D +       T A   + +MA E       +TK DV+S+
Sbjct: 159 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 218

Query: 59  GVLLMETFTR-KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLS 117
           GVLL E  TR   P    +   ++  D     L G           R  Q       C  
Sbjct: 219 GVLLWELMTRGAPP----YPD-VNTFDITVYLLQGR----------RLLQP----EYCPD 259

Query: 118 SIMHLALDCCMESPDQRIYMTDAAAKLKKI 147
            +  + L C     + R   ++  +++  I
Sbjct: 260 PLYEVMLKCWHPKAEMRPSFSELVSRISAI 289

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 57.7 bits (140), Expect = 8e-11
 Identities = 21/63 (33%), Positives = 33/63 (52%)

Query: 5   EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLME 64
              VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E
Sbjct: 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237

Query: 65  TFT 67
            F+
Sbjct: 238 IFS 240

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 57.8 bits (140), Expect = 9e-11
 Identities = 21/63 (33%), Positives = 33/63 (52%)

Query: 5   EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLME 64
              VA + DFG+++ +            M  + +M PE   EGI ++K D +S+GVLL E
Sbjct: 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 278

Query: 65  TFT 67
            F+
Sbjct: 279 IFS 281

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 23/67 (34%), Positives = 36/67 (53%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ + +V  + DFG+S+ +   D       TM  I +M PE       +T+ DV+S+GV
Sbjct: 189 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 248

Query: 61  LLMETFT 67
           +L E FT
Sbjct: 249 VLWEIFT 255

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 56.8 bits (138), Expect = 1e-10
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 5/67 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED VA VSDFG++K     + S TQ      + + APE   E   STK DV+S+G+
Sbjct: 148 VLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGI 202

Query: 61  LLMETFT 67
           LL E ++
Sbjct: 203 LLWEIYS 209

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 55.8 bits (135), Expect = 4e-10
 Identities = 29/116 (25%), Positives = 40/116 (34%), Gaps = 22/116 (18%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE-----YGSEGIVSTKCDV 55
           I L       + DFG+   LG       Q        YMAPE     YG      T  DV
Sbjct: 188 IFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRYMAPELLQGSYG------TAADV 238

Query: 56  YSYGVLLMETFTRKKP------TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
           +S G+ ++E     +         ++  G +         LS EL  V+   L  D
Sbjct: 239 FSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFT--AGLSSELRSVLVMMLEPD 292

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 55.5 bits (134), Expect = 5e-10
 Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 18/116 (15%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           I L +D    + DFGI+++L +    + +     T  Y++PE       + K D+++ G 
Sbjct: 156 IFLTKDGTVQLGDFGIARVL-NSTVELARACI-GTPYYLSPEICENKPYNNKSDIWALGC 213

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNK-----------SLSGELTQVIDANLARD 105
           +L E  T K      F    S+++ V K             S +L  ++     R+
Sbjct: 214 VLYELCTLKHA----FEAG-SMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRN 264

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 55.0 bits (133), Expect = 6e-10
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 18/116 (15%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           + LD      + DFG++++L + D S  +T    T  YM+PE  +    + K D++S G 
Sbjct: 147 VFLDGKQNVKLGDFGLARIL-NHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWSLGC 204

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNK-----------SLSGELTQVIDANLARD 105
           LL E      P    F    S ++   K             S EL ++I   L   
Sbjct: 205 LLYELCALMPP----FTAF-SQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLK 255

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 55.2 bits (133), Expect = 8e-10
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 1   ILLDE-----DMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEY---GSEGIVST 51
           IL+        + A +SDFG+ K L  G  S ++   +  T G++APE      +   + 
Sbjct: 149 ILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTY 208

Query: 52  KCDVYSYGVLLMETFTRKKP 71
             D++S G +     +    
Sbjct: 209 TVDIFSAGCVFYYVISEGSH 228

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 54.6 bits (131), Expect = 1e-09
 Identities = 15/119 (12%), Positives = 39/119 (32%), Gaps = 22/119 (18%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEY-----------GSEGIV 49
           I+LD+     ++ F      G       + ++  + G+  PE                ++
Sbjct: 237 IVLDQRGGVFLTGFEHLVRDG------ARVVSSVSRGFEPPELEARRATISYHRDRRTLM 290

Query: 50  STKCDVYSYGVLLMETFTRKKP---TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
           +   D ++ G+++   +    P      +   E   R   N  +   +  +++  L   
Sbjct: 291 TFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKN--IPQPVRALLEGFLRYP 347

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 53.7 bits (129), Expect = 3e-09
 Identities = 15/80 (18%), Positives = 24/80 (30%), Gaps = 14/80 (17%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQT-MTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           I+L E+ +  + D G           +        T G+ APE       +   D+Y+ G
Sbjct: 213 IMLTEEQLK-LIDLGAVS-------RINSFGYLYGTPGFQAPEI-VRTGPTVATDIYTVG 263

Query: 60  VLLMETFTRKKPTDEMFIGE 79
             L               G 
Sbjct: 264 RTLAALTLDLPT----RNGR 279

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 53.5 bits (129), Expect = 3e-09
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           I L +     + DFG+   L +            T+ YM+PE  S      + D+Y+ G+
Sbjct: 153 IFLVDTKQVKIGDFGLVTSLKNDGKRTRSK---GTLRYMSPEQISSQDYGKEVDLYALGL 209

Query: 61  LLMETFTRKKPTDEM 75
           +L E         E 
Sbjct: 210 ILAELLHVCDTAFET 224

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 51.9 bits (125), Expect = 8e-09
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 7/114 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           + +    V  + D G+ +       +   ++   T  YM+PE   E   + K D++S G 
Sbjct: 167 VFITATGVVKLGDLGLGRFF-SSKTTAAHSLV-GTPYYMSPERIHENGYNFKSDIWSLGC 224

Query: 61  LLMETFTRKKPTDEMFIGE-MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKM 113
           LL E    + P    F G+ M+L     K    +   +   + + + +      
Sbjct: 225 LLYEMAALQSP----FYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMC 274

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 51.9 bits (125), Expect = 8e-09
 Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 32/131 (24%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMAT---------IG---YMAPE------ 42
           I +DE     + DFG++K +    D +                 IG   Y+A E      
Sbjct: 147 IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTG 206

Query: 43  -YGSEGIVSTKCDVYSYGVLLME-------TFTRKKPTDEMFIGEMSLRDWVNKSLSGEL 94
            Y        K D+YS G++  E          R     ++    +      + +     
Sbjct: 207 HYNE------KIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVE 260

Query: 95  TQVIDANLARD 105
            ++I   +  D
Sbjct: 261 KKIIRLLIDHD 271

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 51.8 bits (124), Expect = 1e-08
 Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 10/85 (11%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA----------TIGYMAPEYGSEGIVS 50
           I    D V  V DFG+   +   ++  T    M           T  YM+PE       S
Sbjct: 195 IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYS 254

Query: 51  TKCDVYSYGVLLMETFTRKKPTDEM 75
            K D++S G++L E         E 
Sbjct: 255 HKVDIFSLGLILFELLYSFSTQMER 279

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 51.6 bits (123), Expect = 1e-08
 Identities = 8/73 (10%), Positives = 21/73 (28%), Gaps = 7/73 (9%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEY--GSEGIVSTKCDVYSY 58
           + +  D    + D      +G          +   + Y   E+   S    +   + +  
Sbjct: 225 LFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQL 279

Query: 59  GVLLMETFTRKKP 71
           G+ +   +    P
Sbjct: 280 GLSIYRVWCLFLP 292

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 12/82 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE-----------YGSEGIV 49
            L+ + M+  + DFGI+  +     SV +   + T+ YM PE             S+  +
Sbjct: 158 FLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 216

Query: 50  STKCDVYSYGVLLMETFTRKKP 71
           S K DV+S G +L      K P
Sbjct: 217 SPKSDVWSLGCILYYMTYGKTP 238

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 12/82 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE-----------YGSEGIV 49
            L+ + M+  + DFGI+  +     SV +   + T+ YM PE             S+  +
Sbjct: 139 FLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 197

Query: 50  STKCDVYSYGVLLMETFTRKKP 71
           S K DV+S G +L      K P
Sbjct: 198 SPKSDVWSLGCILYYMTYGKTP 219

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE-----------YGSEGIV 49
            L+ + M+  + DFGI+  +     SV +   +  + YM PE             S+  +
Sbjct: 186 FLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKI 244

Query: 50  STKCDVYSYGVLLMETFTRKKP 71
           S K DV+S G +L      K P
Sbjct: 245 SPKSDVWSLGCILYYMTYGKTP 266

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 9/68 (13%)

Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPE-------YGSEGIVSTKCD 54
            E++   +SDFG+ K L  G  S    +     T G+ APE         ++  ++   D
Sbjct: 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSID 221

Query: 55  VYSYGVLL 62
           ++S G + 
Sbjct: 222 IFSMGCVF 229

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 50.4 bits (121), Expect = 3e-08
 Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 12/71 (16%)

Query: 5   EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE---YGSEGIVSTKCDVYSYGVL 61
                 +SD GIS  +   D      +    I ++ PE         ++   D +S+G  
Sbjct: 156 NPPFIKLSDPGISITVLPKD------ILQERIPWVPPECIENP--KNLNLATDKWSFGTT 207

Query: 62  LMETFTR-KKP 71
           L E  +   KP
Sbjct: 208 LWEICSGGDKP 218

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 50.4 bits (121), Expect = 4e-08
 Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 30/124 (24%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVSTKC------ 53
           ILLDE    H++DF I+ +L       TQ  TMA T  YMAPE     + S++       
Sbjct: 146 ILLDEHGHVHITDFNIAAMLPRE----TQITTMAGTKPYMAPE-----MFSSRKGAGYSF 196

Query: 54  --DVYSYGVLLMETFTRKKP--------TDEMFIGEMSLRDWVN--KSLSGELTQVIDAN 101
             D +S GV   E    ++P        + E+          V    + S E+  ++   
Sbjct: 197 AVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV--HTFETTVVTYPSAWSQEMVSLLKKL 254

Query: 102 LARD 105
           L  +
Sbjct: 255 LEPN 258

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 48.7 bits (116), Expect = 1e-07
 Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 23/119 (19%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVSTKC-DVY 56
           ILLDE    HV  SD G++           +      T GYMAPE   +G+      D +
Sbjct: 323 ILLDEH--GHVRISDLGLACDFSKK-----KPHASVGTHGYMAPEVLQKGVAYDSSADWF 375

Query: 57  SYGVLLMETFT--------RKKPTDEMFIGEMSLRDWVN--KSLSGELTQVIDANLARD 105
           S G +L +           + K   E+    M+L   V    S S EL  +++  L RD
Sbjct: 376 SLGCMLFKLLRGHSPFRQHKTKDKHEID--RMTLTMAVELPDSFSPELRSLLEGLLQRD 432

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 10/127 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE--YGSEGIVSTKCDVYSY 58
           IL+D++    +SDFG S+ + D      +  +  T  +M PE           K D++S 
Sbjct: 183 ILMDKNGRVKLSDFGESEYMVDKK---IKG-SRGTYEFMPPEFFSNESSYNGAKVDIWSL 238

Query: 59  GVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSS 118
           G+ L   F    P    F  ++SL +  N   +  +   +D N      +        + 
Sbjct: 239 GICLYVMFYNVVP----FSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNF 294

Query: 119 IMHLALD 125
           + +  +D
Sbjct: 295 LSNEDID 301

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 30/123 (24%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMA-TIGYMAPE------YGSEGIVST 51
           ILLD+    H+  SD G++  + +G            T+GYMAPE      Y        
Sbjct: 317 ILLDDH--GHIRISDLGLAVHVPEGQ----TIKGRVGTVGYMAPEVVKNERYTFS----- 365

Query: 52  KCDVYSYGVLLMETFT---------RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANL 102
             D ++ G LL E            +K   +E+      + +  ++  S +   +    L
Sbjct: 366 -PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLL 424

Query: 103 ARD 105
            +D
Sbjct: 425 CKD 427

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 13/107 (12%)

Query: 11  VSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRK 69
           + D G++ L        +    +  T  +MAPE   E       DVY++G+ ++E  T +
Sbjct: 173 IGDLGLATLK-----RASFAKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATSE 226

Query: 70  KPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCL 116
            P    +    +      +  SG      D     + +       C+
Sbjct: 227 YP----YSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG--CI 267

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 10/74 (13%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIG----------YMAPEYGSEGIVS 50
           I    D V  V DFG+   +   ++  T    M              YM+PE       S
Sbjct: 149 IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS 208

Query: 51  TKCDVYSYGVLLME 64
            K D++S G++L E
Sbjct: 209 HKVDIFSLGLILFE 222

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 4/75 (5%)

Query: 1   ILLDED-MVAHVSDFGISKLLGDGDDSVTQTMTMATIG---YMAPEYGSEGIVSTKCDVY 56
           +LL  D   A + DFG +  L       +        G   +MAPE         K D++
Sbjct: 181 VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIW 240

Query: 57  SYGVLLMETFTRKKP 71
           S   +++       P
Sbjct: 241 SSCCMMLHMLNGCHP 255

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 47.7 bits (114), Expect = 3e-07
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 7/68 (10%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE----YGSEGIVSTKCDVY 56
           ILLD      + DFGIS  L    DS+ +T       YMAPE      S      + DV+
Sbjct: 157 ILLDRSGNIKLCDFGISGQL---VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVW 213

Query: 57  SYGVLLME 64
           S G+ L E
Sbjct: 214 SLGITLYE 221

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 47.0 bits (112), Expect = 4e-07
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE-----YGSEGIVSTKCDV 55
           ILLDE     + DFGIS  L    D   +  +     YMAPE       ++     + DV
Sbjct: 156 ILLDERGQIKLCDFGISGRL---VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADV 212

Query: 56  YSYGVLLME 64
           +S G+ L+E
Sbjct: 213 WSLGISLVE 221

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 46.7 bits (111), Expect = 6e-07
 Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 33/125 (26%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMA-TIGYMAPE------YGSEGIVST 51
           +LLD+D   +V  SD G++  L  G      T   A T G+MAPE      Y        
Sbjct: 320 VLLDDD--GNVRISDLGLAVELKAGQTK---TKGYAGTPGFMAPELLLGEEYDFS----- 369

Query: 52  KCDVYSYGVLLMETFT---------RKKPTDEMFIGEMSLRDWVN--KSLSGELTQVIDA 100
             D ++ GV L E             K    E+   +  L   V      S       +A
Sbjct: 370 -VDYFALGVTLYEMIAARGPFRARGEKVENKELK--QRVLEQAVTYPDKFSPASKDFCEA 426

Query: 101 NLARD 105
            L +D
Sbjct: 427 LLQKD 431

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 17/72 (23%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATI----GYMAPE------YGSEGIVS 50
           ILLD++M   +SDFG S  L  G+        +  +    GY+APE        +     
Sbjct: 231 ILLDDNMQIRLSDFGFSCHLEPGE-------KLRELCGTPGYLAPEILKCSMDETHPGYG 283

Query: 51  TKCDVYSYGVLL 62
            + D+++ GV+L
Sbjct: 284 KEVDLWACGVIL 295

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 46.0 bits (109), Expect = 1e-06
 Identities = 30/131 (22%), Positives = 46/131 (35%), Gaps = 4/131 (3%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL++      + DFG+S  L    DS+  +    T  YM+PE       S + D++S G+
Sbjct: 163 ILVNSRGEIKLCDFGVSGQL---IDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGL 218

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
            L+E    + P       E+ L            T        R    F +      +I 
Sbjct: 219 SLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIF 278

Query: 121 HLALDCCMESP 131
            L      E P
Sbjct: 279 ELLDYIVNEPP 289

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 11/69 (15%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPE------YGSEGIVSTKC 53
           ILLD+DM   ++DFG S  L  G+    +   +  T  Y+APE        +      + 
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGE----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEV 210

Query: 54  DVYSYGVLL 62
           D++S GV++
Sbjct: 211 DMWSTGVIM 219

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 45.6 bits (108), Expect = 1e-06
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMA--TIGYMAPE--YGSEGIVSTKCD 54
            L   +    +   DFG+SK     ++     MT    T  ++APE    +      KCD
Sbjct: 199 FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258

Query: 55  VYSYGVLL 62
            +S GVLL
Sbjct: 259 AWSAGVLL 266

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 44.6 bits (106), Expect = 3e-06
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 7/68 (10%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE----YGSEGIVSTKCDVY 56
           +L++      + DFGIS  L    D V + +      YMAPE      ++   S K D++
Sbjct: 141 VLINALGQVKMCDFGISGYL---VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIW 197

Query: 57  SYGVLLME 64
           S G+ ++E
Sbjct: 198 SLGITMIE 205

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 1   ILLDEDM-VAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPE--YGSEGIVSTKCDVY 56
           +L++    V  +SDFG SK L         T T   T+ YMAPE             D++
Sbjct: 153 VLINTYSGVLKISDFGTSKRL---AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIW 209

Query: 57  SYGVLLMETFTRKKP 71
           S G  ++E  T K P
Sbjct: 210 SLGCTIIEMATGKPP 224

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 12/70 (17%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTM-ATIGYMAPEYGSEGIVSTK-----CD 54
           ILL+EDM   ++DFG +K+L           +   T  Y++PE     +++ K      D
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFVGTAQYVSPE-----LLTEKSACKSSD 214

Query: 55  VYSYGVLLME 64
           +++ G ++ +
Sbjct: 215 LWALGCIIYQ 224

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 43.9 bits (104), Expect = 6e-06
 Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 20/124 (16%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-------TIGYMAPE----YGSEGIV 49
           ILL ++    + D G         +   Q +T+        TI Y APE         I 
Sbjct: 165 ILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVI- 223

Query: 50  STKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSL--------SGELTQVIDAN 101
             + DV+S G +L      + P D +F    S+   V   L        S  L Q++++ 
Sbjct: 224 DERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSM 283

Query: 102 LARD 105
           +  D
Sbjct: 284 MTVD 287

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 43.4 bits (103), Expect = 8e-06
 Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 20/120 (16%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPE--YGSEGIVSTKCDVY 56
           ILLD +   HV  +DFG+SK     +          TI YMAP+   G +       D +
Sbjct: 190 ILLDSN--GHVVLTDFGLSKEFVADETERAYDFC-GTIEYMAPDIVRGGDSGHDKAVDWW 246

Query: 57  SYGVLLME---------TFTRKKPTDEMFIGEMSLRDWVN--KSLSGELTQVIDANLARD 105
           S GVL+ E             K    E+      L+      + +S     +I   L +D
Sbjct: 247 SLGVLMYELLTGASPFTVDGEKNSQAEIS--RRILKSEPPYPQEMSALAKDLIQRLLMKD 304

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 43.5 bits (102), Expect = 9e-06
 Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 27/120 (22%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPE------YGSEGIVSTK 52
           ++LD +   H+  +DFG+ K     D   T+T    T  Y+APE      YG        
Sbjct: 473 VMLDSE--GHIKIADFGMCKE-NIWDGVTTKTFC-GTPDYIAPEIIAYQPYG------KS 522

Query: 53  CDVYSYGVLLMETFTRKKP-----TDEMFIGEMSLRDWVN--KSLSGELTQVIDANLARD 105
            D +++GVLL E    + P      DE+F  +  +   V   KS+S E   +    + + 
Sbjct: 523 VDWWAFGVLLYEMLAGQAPFEGEDEDELF--QSIMEHNVAYPKSMSKEAVAICKGLMTKH 580

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 27/135 (20%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSY 58
           ILLD+D   H+  +DFG+ K      D+ T T    T  Y+APE       +   D +S+
Sbjct: 149 ILLDKD--GHIKIADFGMCKE-NMLGDAKTNTFC-GTPDYIAPEILLGQKYNHSVDWWSF 204

Query: 59  GVLLMETFTRKKP-----TDEMFIGEMSLRDWVN--KSLSGELTQVIDANLARD------ 105
           GVLL E    + P      +E+F       D     + L  E   ++     R+      
Sbjct: 205 GVLLYEMLIGQSPFHGQDEEELF--HSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLG 262

Query: 106 ------EQSFFVKMD 114
                 +   F +++
Sbjct: 263 VRGDIRQHPLFREIN 277

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 18/71 (25%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM--TMATIGYMAPEYGSEGIVSTK-----C 53
           +LL       ++DFG S        S    +  T+    Y+ PE     ++  +      
Sbjct: 140 LLLGSAGELKIADFGWSVHA---PSSRRTDLCGTLD---YLPPE-----MIEGRMHDEKV 188

Query: 54  DVYSYGVLLME 64
           D++S GVL  E
Sbjct: 189 DLWSLGVLCYE 199

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 27/120 (22%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTM-ATIGYMAPEYGSEGIVSTK----- 52
           ILLDE+   H+  +DFG+SK   D +       +   T+ YMAPE     +V+ +     
Sbjct: 157 ILLDEE--GHIKLTDFGLSKESIDHEKK---AYSFCGTVEYMAPE-----VVNRRGHTQS 206

Query: 53  CDVYSYGVLLMETFTRKKP-----TDEMFIGEMSLRDWVN--KSLSGELTQVIDANLARD 105
            D +S+GVL+ E  T   P       E     M L+  +   + LS E   ++     R+
Sbjct: 207 ADWWSFGVLMFEMLTGTLPFQGKDRKETM--TMILKAKLGMPQFLSPEAQSLLRMLFKRN 264

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 27/120 (22%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPE------YGSEGIVSTK 52
           I+L+     HV  +DFG+ K     D +VT T    TI YMAPE      +         
Sbjct: 152 IMLNHQ--GHVKLTDFGLCKE-SIHDGTVTHTFC-GTIEYMAPEILMRSGHNRA------ 201

Query: 53  CDVYSYGVLLMETFTRKKP-----TDEMFIGEMSLRDWVN--KSLSGELTQVIDANLARD 105
            D +S G L+ +  T   P       +    +  L+  +N    L+ E   ++   L R+
Sbjct: 202 VDWWSLGALMYDMLTGAPPFTGENRKKTI--DKILKCKLNLPPYLTQEARDLLKKLLKRN 259

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 11/112 (9%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ++LD+D    ++DFG+ K  G  D +  +T    T  Y+APE   +       D +  GV
Sbjct: 280 LMLDKDGHIKITDFGLCK-EGIKDGATMKTFC-GTPEYLAPEVLEDNDYGRAVDWWGLGV 337

Query: 61  LLMETFTRKKP-----TDEMFIGEMSLRDWVN--KSLSGELTQVIDANLARD 105
           ++ E    + P      +++F  E+ L + +   ++L  E   ++   L +D
Sbjct: 338 VMYEMMCGRLPFYNQDHEKLF--ELILMEEIRFPRTLGPEAKSLLSGLLKKD 387

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 15/88 (17%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPE-----YGSEGIVSTKC 53
           IL+D +   H+  +DFG    L +     +    + T  Y++PE      G +G    +C
Sbjct: 206 ILMDMN--GHIRLADFGSCLKLMEDGTVQSSVA-VGTPDYISPEILQAMEGGKGRYGPEC 262

Query: 54  DVYSYGVLLMETFTRKKP-----TDEMF 76
           D +S GV + E    + P       E +
Sbjct: 263 DWWSLGVCMYEMLYGETPFYAESLVETY 290

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 21/74 (28%)

Query: 1   ILL---DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE---------YGSEGI 48
           +LL   +ED +  ++DFG SK+LG+   S+ +T+   T  Y+APE         Y     
Sbjct: 270 VLLSSQEEDCLIKITDFGHSKILGET--SLMRTL-CGTPTYLAPEVLVSVGTAGYNRA-- 324

Query: 49  VSTKCDVYSYGVLL 62
                D +S GV+L
Sbjct: 325 ----VDCWSLGVIL 334

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 23/75 (30%)

Query: 1   ILL---DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPE---------YGSEG 47
           +LL   +ED +  ++DFG SK+LG+         T+  T  Y+APE         Y    
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRA- 199

Query: 48  IVSTKCDVYSYGVLL 62
                 D +S GV+L
Sbjct: 200 -----VDCWSLGVIL 209

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 15/114 (13%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSY 58
           ++LD +   H+  +DFG+ K     D   T+T    T  Y+APE  +        D +++
Sbjct: 152 VMLDSE--GHIKIADFGMCKE-NIWDGVTTKTFC-GTPDYIAPEIIAYQPYGKSVDWWAF 207

Query: 59  GVLLMETFTRKKP-----TDEMFIGEMSLRDWVN--KSLSGELTQVIDANLARD 105
           GVLL E    + P      DE+F  +  +   V   KS+S E   +    + + 
Sbjct: 208 GVLLYEMLAGQAPFEGEDEDELF--QSIMEHNVAYPKSMSKEAVAICKGLMTKH 259

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 6/60 (10%)

Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVSTKCDVYSYGVLL 62
           +E+    ++DFG+SK+  +G        T   T GY+APE  ++   S   D +S GV+ 
Sbjct: 143 EENSKIMITDFGLSKMEQNG-----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 197

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 29/120 (24%), Positives = 46/120 (38%), Gaps = 27/120 (22%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPE------YGSEGIVSTK 52
           ILLD     H+  +DFG+ K      +S T T    T  Y+APE      Y         
Sbjct: 170 ILLDSQ--GHIVLTDFGLCKE-NIEHNSTTSTFC-GTPEYLAPEVLHKQPYD------RT 219

Query: 53  CDVYSYGVLLMETFTRKKP-----TDEMFIGEMSLRDWVN--KSLSGELTQVIDANLARD 105
            D +  G +L E      P     T EM+  +  L   +    +++     +++  L +D
Sbjct: 220 VDWWCLGAVLYEMLYGLPPFYSRNTAEMY--DNILNKPLQLKPNITNSARHLLEGLLQKD 277

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 14/64 (21%)

Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE-----YGSEGIVSTKCDVYSY 58
           +  +   + DFG+S           +   + T  Y+APE     Y        KCDV+S 
Sbjct: 183 NSLLNIKIVDFGLSSFFSKDYKLRDR---LGTAYYIAPEVLKKKYN------EKCDVWSC 233

Query: 59  GVLL 62
           GV++
Sbjct: 234 GVIM 237

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 41.7 bits (98), Expect = 3e-05
 Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 15/88 (17%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA----------TIGYMAPE----YGSE 46
           +LL       + DFG +  +    D        A          T  Y  PE    Y + 
Sbjct: 169 LLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNF 228

Query: 47  GIVSTKCDVYSYGVLLMETFTRKKPTDE 74
            I   K D+++ G +L     R+ P ++
Sbjct: 229 PI-GEKQDIWALGCILYLLCFRQHPFED 255

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 41.8 bits (98), Expect = 3e-05
 Identities = 29/182 (15%), Positives = 60/182 (32%), Gaps = 28/182 (15%)

Query: 1   ILL----DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVST---- 51
           I+     D   V  ++DFG ++ L D      Q +++  T  Y+ P+     ++      
Sbjct: 143 IMRVIGEDGQSVYKLTDFGAARELEDD----EQFVSLYGTEEYLHPDMYERAVLRKDHQK 198

Query: 52  ----KCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDA--NLARD 105
                 D++S GV      T   P           ++ + K ++G+ +  I         
Sbjct: 199 KYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-RNKEVMYKIITGKPSGAISGVQKAENG 257

Query: 106 EQSFFVKM-------DCLSSIMHLALDCCMES-PDQRIYMTDAAAKLKKIKEKFLDDVAS 157
              +   M         L  ++   L   +E+  ++        A+   I  + +  V S
Sbjct: 258 PIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRMVIHVFS 317

Query: 158 TN 159
             
Sbjct: 318 LQ 319

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE--YGSEGIVS-TKCDVYS 57
           +L+ ED    ++DFG+S      D  +    T+ T  +MAPE    +  I S    DV++
Sbjct: 168 LLVGEDGHIKIADFGVSNEFKGSDA-LLSN-TVGTPAFMAPESLSETRKIFSGKALDVWA 225

Query: 58  YGVLL 62
            GV L
Sbjct: 226 MGVTL 230

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 41.4 bits (98), Expect = 4e-05
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 18/71 (25%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM--TMATIGYMAPEYGSEGIVSTK-----C 53
           +L+       ++DFG S           +TM  T+    Y+ PE     ++  K      
Sbjct: 145 LLMGYKGELKIADFGWSVHA---PSLRRRTMCGTLD---YLPPE-----MIEGKTHDEKV 193

Query: 54  DVYSYGVLLME 64
           D++  GVL  E
Sbjct: 194 DLWCAGVLCYE 204

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 19/67 (28%)

Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPE------YGSEGIVSTKCDV 55
             D    ++DFG+SK++          M     T GY APE      YG E       D+
Sbjct: 185 APDAPLKIADFGLSKIVEHQ-----VLMKTVCGTPGYCAPEILRGCAYGPE------VDM 233

Query: 56  YSYGVLL 62
           +S G++ 
Sbjct: 234 WSVGIIT 240

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 41.0 bits (97), Expect = 4e-05
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 18/66 (27%)

Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPE-----YGSEGIVSTKCDVY 56
             D    + DFG++     G     + M     T  Y++P+     YG       +CD +
Sbjct: 143 SPDSPLKLIDFGLAARFKPG-----KMMRTKVGTPYYVSPQVLEGLYG------PECDEW 191

Query: 57  SYGVLL 62
           S GV++
Sbjct: 192 SAGVMM 197

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 27/120 (22%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPE------YGSEGIVSTK 52
           +LLD +   H   +DFG+ K  G  +   T T    T  Y+APE      YG        
Sbjct: 155 VLLDHE--GHCKLADFGMCKE-GICNGVTTATFC-GTPDYIAPEILQEMLYG------PA 204

Query: 53  CDVYSYGVLLMETFTRKKP-----TDEMFIGEMSLRDWVN--KSLSGELTQVIDANLARD 105
            D ++ GVLL E      P      D++F  E  L D V     L  + T ++ + + ++
Sbjct: 205 VDWWAMGVLLYEMLCGHAPFEAENEDDLF--EAILNDEVVYPTWLHEDATGILKSFMTKN 262

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 21/72 (29%)

Query: 1   ILL---DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPE-----YGSEGIVS 50
           IL           + DFG+++L         +  T A  T  YMAPE             
Sbjct: 155 ILFQDTSPHSPIKIIDFGLAELFKSD-----EHSTNAAGTALYMAPEVFKRDVT------ 203

Query: 51  TKCDVYSYGVLL 62
            KCD++S GV++
Sbjct: 204 FKCDIWSAGVVM 215

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 21/72 (29%)

Query: 1   ILL---DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPE-----YGSEGIVS 50
           ILL   ++D    + DFG+S             M     T  Y+APE     Y       
Sbjct: 152 ILLESKEKDCDIKIIDFGLSTCFQQN-----TKMKDRIGTAYYIAPEVLRGTYD------ 200

Query: 51  TKCDVYSYGVLL 62
            KCDV+S GV+L
Sbjct: 201 EKCDVWSAGVIL 212

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 40.8 bits (96), Expect = 7e-05
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 9/70 (12%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPE----YGSEGIVSTKCD 54
           +LLD+    H+  +DFG    +         T    T  Y++PE     G +G    +CD
Sbjct: 199 MLLDKS--GHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECD 255

Query: 55  VYSYGVLLME 64
            +S GV L E
Sbjct: 256 WWSVGVFLYE 265

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 40.7 bits (96), Expect = 8e-05
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 27/120 (22%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPE------YGSEGIVSTK 52
           ++LD+D   H+  +DFG+ K  G  D +  +T    T  Y+APE      YG        
Sbjct: 136 LMLDKD--GHIKITDFGLCKE-GISDGATMKTFC-GTPEYLAPEVLEDNDYG------RA 185

Query: 53  CDVYSYGVLLMETFTRKKP-----TDEMFIGEMSLRDWVN--KSLSGELTQVIDANLARD 105
            D +  GV++ E    + P      + +F  E+ L + +   ++LS E   ++   L +D
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLF--ELILMEEIRFPRTLSPEAKSLLAGLLKKD 243

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 25/158 (15%), Positives = 53/158 (33%), Gaps = 28/158 (17%)

Query: 1   ILL----DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVST---- 51
           I+     D   V  ++DFG ++ L D      Q +++  T  Y+ P+     ++      
Sbjct: 143 IMRVIGEDGQSVYKLTDFGAARELEDD----EQFVSLYGTEEYLHPDMYERAVLRKDHQK 198

Query: 52  ----KCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQ 107
                 D++S GV      T   P           ++ + K ++G+ +  I      +  
Sbjct: 199 KYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-RNKEVMYKIITGKPSGAISGVQKAENG 257

Query: 108 SFFVKMD---------CLSSIMHLALDCCMES-PDQRI 135
                 D          L  ++   L   +E+  ++  
Sbjct: 258 PIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCW 295

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 22/73 (30%)

Query: 1   ILL---DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA--TIGYMAPE------YGSEGIV 49
           +LL    +     ++DFG++  + D      +       T GY++PE      Y      
Sbjct: 159 LLLASKAKGAAVKLADFGLAIEVNDS-----EAWHGFAGTPGYLSPEVLKKDPYSKP--- 210

Query: 50  STKCDVYSYGVLL 62
               D+++ GV+L
Sbjct: 211 ---VDIWACGVIL 220

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLL 62
           ++D +  + DFG+S +  +      +   + T  Y+APE         KCDV+S GV+L
Sbjct: 173 EKDALIKIVDFGLSAVFENQKKMKER---LGTAYYIAPEV-LRKKYDEKCDVWSIGVIL 227

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLL 62
            +D    + DFG+S           +     T  Y+APE    G    KCDV+S GV+L
Sbjct: 163 SKDANIRIIDFGLSTHFEASKKMKDKI---GTAYYIAPEV-LHGTYDEKCDVWSTGVIL 217

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 14/64 (21%)

Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE-----YGSEGIVSTKCDVYSY 58
           ++D    + DFG+S           +   + T  Y+APE     Y        KCDV+S 
Sbjct: 158 EKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPEVLRGTYD------EKCDVWSA 208

Query: 59  GVLL 62
           GV+L
Sbjct: 209 GVIL 212

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 20/72 (27%)

Query: 1   ILL---DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPE------YGSEGIVS 50
           +LL    +     ++DFG++  + D +         A T GY++PE      Y       
Sbjct: 136 LLLASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSKP---- 187

Query: 51  TKCDVYSYGVLL 62
              D+++ GV+L
Sbjct: 188 --VDIWACGVIL 197

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 6/64 (9%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM--TMATIGYMAPEYGSEGIVSTKCDVYSY 58
           + L+ED+   + DFG++  + + D    + +  T     Y+APE  S+   S + DV+S 
Sbjct: 172 LFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPN---YIAPEVLSKKGHSFEVDVWSI 227

Query: 59  GVLL 62
           G ++
Sbjct: 228 GCIM 231

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 16/59 (27%)

Query: 11  VSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPE------YGSEGIVSTKCDVYSYGVLL 62
           + DFG +K L   +      MT   T  ++APE      Y +       CD++S GVLL
Sbjct: 161 ICDFGFAKQLRAENGL---LMTPCYTANFVAPEVLERQGYDAA------CDIWSLGVLL 210

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 11  VSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLL 62
           + DFG++  L   +      +T AT  + APE      V    D+++ GVL 
Sbjct: 192 IIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLG 240

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 29/96 (30%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPE-------------YGS 45
           ILLD     H+  +DFG    L       +    + T  Y++PE             YG 
Sbjct: 193 ILLDRC--GHIRLADFGSCLKLRADGTVRSLVA-VGTPDYLSPEILQAVGGGPGTGSYGP 249

Query: 46  EGIVSTKCDVYSYGVLLMETFTRKKP-----TDEMF 76
           E      CD ++ GV   E F  + P     T E +
Sbjct: 250 E------CDWWALGVFAYEMFYGQTPFYADSTAETY 279

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 18/70 (25%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM--TMATIGYMAPE------YGSEGIVSTK 52
           +LL  +M   ++DFG++  L         T+  T     Y++PE      +G E      
Sbjct: 143 LLLTRNMNIKIADFGLATQL-KMPHEKHYTLCGTPN---YISPEIATRSAHGLE------ 192

Query: 53  CDVYSYGVLL 62
            DV+S G + 
Sbjct: 193 SDVWSLGCMF 202

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 13/75 (17%)

Query: 1   ILL---DEDMVAHVSDFGISKLLGDGDD-SVTQTMTMATI----GYMAPE-----YGSEG 47
           IL    ++     + DF +   +    D S   T  + T      YMAPE          
Sbjct: 142 ILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEAS 201

Query: 48  IVSTKCDVYSYGVLL 62
           I   +CD++S GV+L
Sbjct: 202 IYDKRCDLWSLGVIL 216

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 16/66 (24%)

Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPE------YGSEGIVSTKCDVY 56
           ++++   + DFG ++L    +  +    T   T+ Y APE      Y         CD++
Sbjct: 143 NDNLEIKIIDFGFARLKPPDNQPL---KTPCFTLHYAAPELLNQNGYDES------CDLW 193

Query: 57  SYGVLL 62
           S GV+L
Sbjct: 194 SLGVIL 199

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 19/72 (26%)

Query: 1   ILL---DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPE------YGSEGIVS 50
           +LL   +      +  FG++  LG+             T  +MAPE      YG      
Sbjct: 161 VLLASKENSAPVKLGGFGVAIQLGESGLVAG---GRVGTPHFMAPEVVKREPYGKP---- 213

Query: 51  TKCDVYSYGVLL 62
              DV+  GV+L
Sbjct: 214 --VDVWGCGVIL 223

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 38.9 bits (90), Expect = 3e-04
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 18/71 (25%)

Query: 1   ILLD---EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE------YGSEGIVST 51
           I+L    + ++  + D G +K L  G   +     + T+ Y+APE      Y        
Sbjct: 152 IVLQPGPQRLIHKIIDLGYAKELDQG--ELCTEF-VGTLQYLAPELLEQKKYTV------ 202

Query: 52  KCDVYSYGVLL 62
             D +S+G L 
Sbjct: 203 TVDYWSFGTLA 213

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 38.7 bits (91), Expect = 4e-04
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 6/64 (9%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTM--TMATIGYMAPEYGSEGIVSTKCDVYSY 58
           + L+ED+   + DFG++  + + D    + +  T     Y+APE  S+   S + DV+S 
Sbjct: 146 LFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPN---YIAPEVLSKKGHSFEVDVWSI 201

Query: 59  GVLL 62
           G ++
Sbjct: 202 GCIM 205

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 18/66 (27%)

Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPE------YGSEGIVSTKCDVY 56
           ++D V  ++DFG +K             T   T  Y+APE      Y         CD++
Sbjct: 165 EKDAVLKLTDFGFAKETTQN-----ALQTPCYTPYYVAPEVLGPEKYD------KSCDMW 213

Query: 57  SYGVLL 62
           S GV++
Sbjct: 214 SLGVIM 219

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 11  VSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLL 62
           + +FG ++ L  GD      +      Y APE     +VST  D++S G L+
Sbjct: 145 IIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 11  VSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLL 62
           + DFG++  + DG           T  ++APE  +   +  + D++S GV+ 
Sbjct: 160 LIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIG---YMAPEYGSEGIVSTKCDVYS 57
           ILL+ +  A ++DFG++  L    D++ +  T+  IG   +MAPE   E   +   D++S
Sbjct: 156 ILLNTEGHAKLADFGVAGQL---TDTMAKRNTV--IGTPFWMAPEVIQEIGYNCVADIWS 210

Query: 58  YGVLLME 64
            G+  +E
Sbjct: 211 LGITAIE 217

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 8/74 (10%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIG---YMAPEYGSEGIVSTKCDVYS 57
           +LL E     ++DFG++  L    D+  +  T   +G   +MAPE   +    +K D++S
Sbjct: 150 VLLSEHGEVKLADFGVAGQL---TDTQIKRNTF--VGTPFWMAPEVIKQSAYDSKADIWS 204

Query: 58  YGVLLMETFTRKKP 71
            G+  +E    + P
Sbjct: 205 LGITAIELARGEPP 218

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 8/67 (11%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIG---YMAPEYGSEGIVSTKCDVYS 57
           ILL  D    +SDFG    +      V +  ++  +G   +MAPE  S  + +T+ D++S
Sbjct: 172 ILLTLDGRVKLSDFGFCAQI---SKDVPKRKSL--VGTPYWMAPEVISRSLYATEVDIWS 226

Query: 58  YGVLLME 64
            G++++E
Sbjct: 227 LGIMVIE 233

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVSTKCDVYSYG 59
           ILL  D    ++DFG    +       ++  TM  T  +MAPE  +      K D++S G
Sbjct: 147 ILLGMDGSVKLTDFGFCAQI---TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203

Query: 60  VLLME 64
           ++ +E
Sbjct: 204 IMAIE 208

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 38.2 bits (89), Expect = 6e-04
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 23/69 (33%)

Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATI----GYMAPE------YGSEGIVSTKC 53
             + +  ++DFG +K     +       ++ T      Y+APE      Y         C
Sbjct: 198 RPNAILKLTDFGFAKETTSHN-------SLTTPCYTPYYVAPEVLGPEKYDKS------C 244

Query: 54  DVYSYGVLL 62
           D++S GV++
Sbjct: 245 DMWSLGVIM 253

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 37.9 bits (89), Expect = 6e-04
 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 21/72 (29%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTM-ATIGYMAPEYGSEGIVSTK----- 52
           ILLD++   H+  +DFG +K + D       T T+  T  Y+APE     +VSTK     
Sbjct: 137 ILLDKN--GHIKITDFGFAKYVPD------VTYTLCGTPDYIAPE-----VVSTKPYNKS 183

Query: 53  CDVYSYGVLLME 64
            D +S+G+L+ E
Sbjct: 184 IDWWSFGILIYE 195

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 36/129 (27%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPE------YGSEGIVSTK 52
           +LLD +   H+  +D+G+ K  G      T T    T  Y+APE      YG        
Sbjct: 141 VLLDSE--GHIKLTDYGMCKE-GLRPGDTTSTFC-GTPNYIAPEILRGEDYGFS------ 190

Query: 53  CDVYSYGVLLMETFTRKKP--------------TDEMFIGEMSLRDWVN--KSLSGELTQ 96
            D ++ GVL+ E    + P               D +F  ++ L   +   +SLS +   
Sbjct: 191 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF--QVILEKQIRIPRSLSVKAAS 248

Query: 97  VIDANLARD 105
           V+ + L +D
Sbjct: 249 VLKSFLNKD 257

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 38.1 bits (89), Expect = 6e-04
 Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 34/128 (26%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVS----TKC- 53
           +LLD +   H+  +D+G+ K  G      T T    T  Y+APE     I+         
Sbjct: 184 VLLDSE--GHIKLTDYGMCKE-GLRPGDTTSTFC-GTPNYIAPE-----ILRGEDYGFSV 234

Query: 54  DVYSYGVLLMETFTRKKP--------------TDEMFIGEMSLRDWVN--KSLSGELTQV 97
           D ++ GVL+ E    + P               D +F  ++ L   +   +SLS +   V
Sbjct: 235 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF--QVILEKQIRIPRSLSVKAASV 292

Query: 98  IDANLARD 105
           + + L +D
Sbjct: 293 LKSFLNKD 300

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 37.9 bits (88), Expect = 6e-04
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 11  VSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLL 62
           + DFG++  L          +T  T  + APE      V    D++S GVL 
Sbjct: 298 LIDFGLTAHLDPKQSV---KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS 346

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 11  VSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLL 62
           + DFG++  + DG           T  ++APE  +   +  + D++S GV+ 
Sbjct: 160 LIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE--YGSEGIVSTKCDVYSY 58
           +LL       +S  G+++ L       T   +  +  +  PE   G +     K D++S 
Sbjct: 140 LLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSA 199

Query: 59  GVLL 62
           GV L
Sbjct: 200 GVTL 203

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 38.0 bits (88), Expect = 7e-04
 Identities = 11/73 (15%), Positives = 19/73 (26%)

Query: 11  VSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKK 70
           + D G S  +         T    T G+   E  S    + + D +     +        
Sbjct: 224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTY 283

Query: 71  PTDEMFIGEMSLR 83
              +   GE    
Sbjct: 284 MKVKNEGGECKPE 296

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE-YGSEGIVSTKCDVYSYG 59
           I++ ED    + DFG +  L  G    T      TI Y APE          + +++S G
Sbjct: 161 IVIAEDFTIKLIDFGSAAYLERGKLFYT---FCGTIEYCAPEVLMGNPYRGPELEMWSLG 217

Query: 60  VLL 62
           V L
Sbjct: 218 VTL 220

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 37.8 bits (88), Expect = 8e-04
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 11  VSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLL 62
           + DFG+++     +      +   T  ++APE  +   VS   D++S GV+ 
Sbjct: 230 IIDFGLARRYKPRE---KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIA 278

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 37.6 bits (88), Expect = 9e-04
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 6/65 (9%)

Query: 1   ILL---DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYS 57
           ILL          + DFG+S+ +G       + + M T  Y+APE  +   ++T  D+++
Sbjct: 162 ILLSSIYPLGDIKIVDFGMSRKIGHAC--ELREI-MGTPEYLAPEILNYDPITTATDMWN 218

Query: 58  YGVLL 62
            G++ 
Sbjct: 219 IGIIA 223

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	159
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.97
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.97
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.97
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.97
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.97
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.95
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.95
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.95
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.94
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.94
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.93
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.93
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.93
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.93
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.93
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.92
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.92
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.92
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.92
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.92
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.92
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.92
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.91
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.91
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.91
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.91
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.91
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.91
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.91
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.91
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.91
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.91
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.91
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.91
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.91
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.91
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.9
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.9
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.9
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.9
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.9
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.9
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.9
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.9
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.9
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.9
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.9
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.9
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.9
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.9
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.9
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.9
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.9
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.89
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.89
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.89
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.89
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.89
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.89
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.89
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.89
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.89
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.89
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.89
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.89
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.89
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.89
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.89
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.89
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.89
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.89
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.89
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.88
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.88
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.88
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.88
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.88
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.88
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.88
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.88
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.88
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.88
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.88
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.88
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.88
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.88
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.88
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.88
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.88
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.88
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.88
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.88
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.88
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.88
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.88
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.88
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.88
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.88
3niz_A	311	Rhodanese family protein; structural genomics, str	99.87
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.87
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.87
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.87
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.87
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.87
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.87
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.87
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.87
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.87
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.87
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.87
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.87
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.87
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.87
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.87
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.87
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.87
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.87
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.87
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.87
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.87
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.87
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.87
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.87
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.87
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.87
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.87
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.87
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.87
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.87
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.86
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.86
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.86
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.86
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.86
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.86
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.86
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.86
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.86
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.86
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.86
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.86
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.86
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.86
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.86
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.86
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.86
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.86
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.86
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.86
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.86
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.86
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.86
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.86
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.86
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.86
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.86
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.86
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.86
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.86
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.86
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.86
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.86
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.86
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.86
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.86
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.86
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.85
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.85
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.85
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.85
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.85
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.85
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.85
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.85
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.85
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.85
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.85
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.85
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.85
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.85
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.85
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.85
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.85
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.85
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.85
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.85
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.85
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.85
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.85
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.85
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.85
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.84
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.84
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.84
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.84
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.84
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.84
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.84
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.84
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.84
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.84
3bhy_A	283	Death-associated protein kinase 3; death associate	99.84
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.84
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.84
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.84
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.84
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.84
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.84
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.84
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.84
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.84
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.84
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.84
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.84
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.84
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.84
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.83
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.83
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.83
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.83
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.83
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.83
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.83
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.83
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.83
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.83
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.83
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.83
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.83
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.83
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.82
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.82
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.82
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.82
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.82
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.81
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.8
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.8
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.79
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.79
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.77
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.74
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.68
3uqc_A	286	Probable conserved transmembrane protein; structur	99.58
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.55
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.97
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.24
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	92.0
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	84.91
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	83.96

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.97  E-value=7.6e-33  Score=186.61  Aligned_cols=137  Identities=21%  Similarity=0.374  Sum_probs=94.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC---CccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE---GIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.++.+||+|||+|+..............+||+.|+|||++.+   ..|+.++|||||||++|||++|+.||.....
T Consensus       163 ILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~  242 (307)
T 3omv_A          163 IFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN  242 (307)
T ss_dssp             EEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred             EEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh
Confidence            6899999999999999987643333333445679999999998753   3588999999999999999999999975322


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      .. .....+.....       .+.+      ...+.+++..+.+++.+||+.||++|||+.||++.|+.++..+
T Consensus       243 ~~-~~~~~~~~~~~-------~p~~------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          243 RD-QIIFMVGRGYA-------SPDL------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             HH-HHHHHHHTTCC-------CCCS------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             HH-HHHHHHhcCCC-------CCCc------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence            11 11111111110       0000      1112356678999999999999999999999999999887654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.97  E-value=2.9e-32  Score=187.13  Aligned_cols=133  Identities=25%  Similarity=0.376  Sum_probs=102.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+|+...........+...||+.|+|||++.+..|+.++|||||||++|||++ |..||.......
T Consensus       216 ILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~  295 (353)
T 4ase_A          216 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  295 (353)
T ss_dssp             EEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             eeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH
Confidence            6889999999999999987755444444555679999999999999899999999999999999997 899997643221


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                       .+...+.....                 ...|..+++.+.+++.+||+.||++|||+.+|++.|+++++..
T Consensus       296 -~~~~~i~~g~~-----------------~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~  349 (353)
T 4ase_A          296 -EFCRRLKEGTR-----------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  349 (353)
T ss_dssp             -HHHHHHHHTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             -HHHHHHHcCCC-----------------CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence             11111111110                 0112345678899999999999999999999999999987654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.97  E-value=7.4e-32  Score=183.73  Aligned_cols=131  Identities=26%  Similarity=0.388  Sum_probs=92.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...........+...||+.|+|||++.+..++.++||||||+++||+++ |+.||...... 
T Consensus       189 ILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-  267 (329)
T 4aoj_A          189 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-  267 (329)
T ss_dssp             EEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-
T ss_pred             EEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-
Confidence            6889999999999999987654444434445679999999999999999999999999999999998 89999754221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       .....+....                 ....|..+++.+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus       268 -~~~~~i~~g~-----------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          268 -EAIDCITQGR-----------------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             -HHHHHHHHTC-----------------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             -HHHHHHHcCC-----------------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence             1111111110                 0111235667899999999999999999999999999998764

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=3.6e-31  Score=178.88  Aligned_cols=142  Identities=16%  Similarity=0.263  Sum_probs=96.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc--cccccccccccccccccCCC------ccccchhhHhHHHHHHHHHhcCCCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV--TQTMTMATIGYMAPEYGSEG------IVSTKCDVYSYGVLLMETFTRKKPT   72 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~~~~pe~~~~~------~~~~~~dv~s~g~~~~~~~~~~~p~   72 (159)
                      ||++.++.+||+|||+++.........  .....+||+.|+|||++.+.      .++.++|||||||++|||++|..||
T Consensus       139 ILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~  218 (303)
T 3hmm_A          139 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             EEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred             EEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCC
Confidence            689999999999999998765433221  22345799999999987653      4778999999999999999998766


Q ss_pred             cccccc----------cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           73 DEMFIG----------EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        73 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ......          ..........        +....+.+..+......+++..+.+++.+||+.||++|||+.||++
T Consensus       219 ~~~~~~~~p~~~~~~~~~~~~~~~~~--------~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          219 GIHEDYQLPYYDLVPSDPSVEEMRKV--------VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             TBCCCCCCTTTTTSCSSCCHHHHHHH--------HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             CccccccccchhcccccchHHHHHHH--------HhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            432211          1111111111        1111122222222233467778999999999999999999999999


Q ss_pred             HHHHHHHH
Q 035782          143 KLKKIKEK  150 (159)
Q Consensus       143 ~l~~~~~~  150 (159)
                      .|+++.++
T Consensus       291 ~L~~l~~~  298 (303)
T 3hmm_A          291 TLSQLSQQ  298 (303)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHH
Confidence            99998765

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.97  E-value=3.8e-32  Score=183.63  Aligned_cols=128  Identities=23%  Similarity=0.367  Sum_probs=98.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||+++++.+||+|||+++...........+...||+.|+|||++.+..|+.++||||||+++||+++ |..||.....  
T Consensus       176 ILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--  253 (308)
T 4gt4_A          176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--  253 (308)
T ss_dssp             EEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--
T ss_pred             eEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--
Confidence            6899999999999999987644333333455679999999999998899999999999999999998 8899875422  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                      ......+...           .      ..+.+.+++..+.+++.+||+.||++|||+.||++.|++.
T Consensus       254 ~~~~~~i~~~-----------~------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          254 QDVVEMIRNR-----------Q------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHHHHHHTT-----------C------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHcC-----------C------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            1111111110           0      0112335677899999999999999999999999998764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.97  E-value=6.3e-32  Score=181.89  Aligned_cols=131  Identities=24%  Similarity=0.379  Sum_probs=99.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+|+...............||+.|+|||++.+..|+.++||||||+++||+++ |+.||...... 
T Consensus       159 ILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-  237 (299)
T 4asz_A          159 CLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-  237 (299)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-
T ss_pred             EEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence            6889999999999999987654333333344568999999999999899999999999999999998 89999764221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       .....+....           .      ...|..++..+.+++.+||+.||++|||+.+|+..|+++.+.
T Consensus       238 -~~~~~i~~~~-----------~------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          238 -EVIECITQGR-----------V------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             -HHHHHHHHTC-----------C------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHcCC-----------C------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence             1111111110           0      011235667899999999999999999999999999988764

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.97  E-value=1.2e-30  Score=177.59  Aligned_cols=134  Identities=19%  Similarity=0.187  Sum_probs=97.2

Q ss_pred             CccCCCC-ceEEcccccceecCCCCCc---ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDM-VAHVSDFGISKLLGDGDDS---VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~-~~kl~Dfg~~~~~~~~~~~---~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      ||++.+| .+||+|||+|+.+......   ......+||+.|+|||++.+..|+.++||||+||++|+|++|..||....
T Consensus       181 ILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~  260 (336)
T 4g3f_A          181 VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF  260 (336)
T ss_dssp             EEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC
T ss_pred             EEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            6888887 6999999999887533221   12234579999999999999999999999999999999999999997543


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      ....  ...+..               ..+.....+..+++.+.+++.+||+.||.+|||+.|+++.|....++.
T Consensus       261 ~~~~--~~~i~~---------------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~  318 (336)
T 4g3f_A          261 RGPL--CLKIAS---------------EPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV  318 (336)
T ss_dssp             CSCC--HHHHHH---------------SCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HHHH--HHHHHc---------------CCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence            2211  111111               111111122355678899999999999999999999999998887764

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.96  E-value=5.1e-30  Score=175.02  Aligned_cols=123  Identities=20%  Similarity=0.219  Sum_probs=92.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+|+.+....  ...+..+||+.|+|||++.+..|+.++||||+||++|+|++|..||.....  .
T Consensus       201 ILl~~~g~vKl~DFGla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~  276 (346)
T 4fih_A          201 ILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--L  276 (346)
T ss_dssp             EEECTTCCEEECCCTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--H
T ss_pred             EEECCCCCEEEecCcCceecCCCC--CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--H
Confidence            689999999999999998864322  223457899999999999998999999999999999999999999965321  1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....+........               ..+...++.+.+++.+||..||++|||+.|+++
T Consensus       277 ~~~~~i~~~~~~~~---------------~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          277 KAMKMIRDNLPPRL---------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHHHHHHSSCCCC---------------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHcCCCCCC---------------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11122221111111               111234567889999999999999999999875

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.96  E-value=4.1e-29  Score=167.35  Aligned_cols=120  Identities=20%  Similarity=0.310  Sum_probs=85.4

Q ss_pred             CccC-CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++ .+|.+||+|||+|+.....    .....+||+.|+|||++.+ +|+.++||||+||++|+|++|..||...... 
T Consensus       162 ILl~~~~g~vKl~DFGla~~~~~~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-  235 (290)
T 3fpq_A          162 IFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-  235 (290)
T ss_dssp             EEESSTTSCEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-
T ss_pred             eeEECCCCCEEEEeCcCCEeCCCC----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-
Confidence            5787 4799999999999764321    2334689999999998865 6899999999999999999999999643211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                         ..............             ..+...++.+.+++.+||..||++|||+.|+++
T Consensus       236 ---~~~~~~i~~~~~~~-------------~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          236 ---AQIYRRVTSGVKPA-------------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ---HHHHHHHTTTCCCG-------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ---HHHHHHHHcCCCCC-------------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence               11111111110000             011123456889999999999999999999875

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.95  E-value=3e-29  Score=175.09  Aligned_cols=123  Identities=20%  Similarity=0.219  Sum_probs=92.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+|+.+....  ......+||+.|+|||++.+..|+.++||||+||++|+|++|..||.....  .
T Consensus       278 ILl~~~g~vKl~DFGla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~  353 (423)
T 4fie_A          278 ILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--L  353 (423)
T ss_dssp             EEECTTCCEEECCCTTCEECCSSC--CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--H
T ss_pred             EEEcCCCCEEEecCccceECCCCC--ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--H
Confidence            689999999999999998764322  234457899999999999998999999999999999999999999965321  1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....+........               ..+......+.+++.+||..||.+|||+.|+++
T Consensus       354 ~~~~~i~~~~~~~~---------------~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          354 KAMKMIRDNLPPRL---------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             HHHHHHHHSCCCCC---------------SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHcCCCCCC---------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11122222111111               011234567889999999999999999999985

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.95  E-value=1.5e-29  Score=172.95  Aligned_cols=121  Identities=21%  Similarity=0.291  Sum_probs=90.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+|+.....  ....+..+||+.|+|||++.+..|+.++||||+||++|+|++|..||.....  .
T Consensus       156 ILl~~~g~vKl~DFGla~~~~~~--~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~  231 (350)
T 4b9d_A          156 IFLTKDGTVQLGDFGIARVLNST--VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--K  231 (350)
T ss_dssp             EEECTTCCEEECSTTEESCCCHH--HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--H
T ss_pred             EEECCCCCEEEcccccceeecCC--cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--H
Confidence            68999999999999999876321  1123446799999999999999999999999999999999999999975321  1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....+..   ....        +      .+...+..+.+++.+||+.||++|||+.|+++
T Consensus       232 ~~~~~i~~---~~~~--------~------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          232 NLVLKIIS---GSFP--------P------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHHHHH---TCCC--------C------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHc---CCCC--------C------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11111111   0000        0      11234567889999999999999999999985

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.95  E-value=3.8e-29  Score=168.49  Aligned_cols=121  Identities=18%  Similarity=0.235  Sum_probs=91.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+|+.+............+||+.|+|||++.+..|+.++|+||+||++|+|++|..||.....  .
T Consensus       163 ILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~  240 (311)
T 4aw0_A          163 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--G  240 (311)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--H
T ss_pred             eEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--H
Confidence            68899999999999999987544433344567899999999999998999999999999999999999999965321  1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      .....+....           +.       .+....+.+.+++.+||..||.+|||+.|++
T Consensus       241 ~~~~~i~~~~-----------~~-------~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          241 LIFAKIIKLE-----------YD-------FPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHHHHHHHTC-----------CC-------CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             HHHHHHHcCC-----------CC-------CCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            1111111110           00       0112345688999999999999999999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.95  E-value=2.7e-28  Score=162.20  Aligned_cols=119  Identities=25%  Similarity=0.370  Sum_probs=80.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+|+......   .....+||+.|+|||++.+..+ +.++|+||+||++|+|++|..||.....  
T Consensus       143 ILl~~~~~vkl~DFGla~~~~~~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--  217 (275)
T 3hyh_A          143 LLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--  217 (275)
T ss_dssp             EEECTTCCEEECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred             eEECCCCCEEEeecCCCeecCCCC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--
Confidence            688999999999999998764322   2334679999999999988775 5789999999999999999999965321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ......+.....            .      .+...++.+.+++.+||+.||++|||+.|+++
T Consensus       218 ~~~~~~i~~~~~------------~------~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          218 PVLFKNISNGVY------------T------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HHHHHHHHHTCC------------C------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCC------------C------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            111111111100            0      01123456889999999999999999999986

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.94  E-value=3.8e-28  Score=163.46  Aligned_cols=119  Identities=25%  Similarity=0.253  Sum_probs=86.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+|+......  ......+||+.|+|||++.+..|+.++|+||+||++|+|++|..||.....  .
T Consensus       157 ILl~~~g~vKl~DFGla~~~~~~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~  232 (304)
T 3ubd_A          157 ILLDEEGHIKLTDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--K  232 (304)
T ss_dssp             EEECTTSCEEEESSEEEEC-------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--H
T ss_pred             eEEcCCCCEEecccccceeccCCC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--H
Confidence            688999999999999998754322  123446799999999999998999999999999999999999999975321  1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH-----HHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM-----TDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~-----~~ll  141 (159)
                      .....+....           . .      .+...++.+.+++.+||+.||++|||+     +|++
T Consensus       233 ~~~~~i~~~~-----------~-~------~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil  280 (304)
T 3ubd_A          233 ETMTMILKAK-----------L-G------MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIK  280 (304)
T ss_dssp             HHHHHHHHCC-----------C-C------CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHH
T ss_pred             HHHHHHHcCC-----------C-C------CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHH
Confidence            1111111110           0 0      012345678899999999999999984     5666

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.94  E-value=8.1e-27  Score=158.95  Aligned_cols=148  Identities=17%  Similarity=0.287  Sum_probs=101.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||++.++.+||+|||+++.+.............||+.|+|||++.+     ..++.++||||+|++++++++|..||...
T Consensus       162 ill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~  241 (322)
T 3soc_A          162 VLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP  241 (322)
T ss_dssp             EEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred             EEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence            5788999999999999987754433333344578999999998876     35677899999999999999999998754


Q ss_pred             ccccc-cHHHHHHhhcCCcccch----hhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           76 FIGEM-SLRDWVNKSLSGELTQV----IDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        76 ~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      ..... .+......  ......+    ......+...........+..+.+++.+||+.||.+|||+.++++.|+++.+.
T Consensus       242 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          242 VDEYMLPFEEEIGQ--HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             CCCCCCTTHHHHCS--SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cchhccchhhhhcc--CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            32211 11110000  0000000    01111111122222345677899999999999999999999999999999875

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.93  E-value=3.4e-27  Score=158.99  Aligned_cols=121  Identities=21%  Similarity=0.251  Sum_probs=78.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCc----------ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS----------VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKK   70 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~   70 (159)
                      ||++.+|.+||+|||+|+.+......          ...+..+||+.|+|||++.+..|+.++||||+||++|||++   
T Consensus       149 ILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---  225 (299)
T 4g31_A          149 IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---  225 (299)
T ss_dssp             EEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---
T ss_pred             eEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---
Confidence            68899999999999999876432211          12234579999999999999999999999999999999995   


Q ss_pred             CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           71 PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        71 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ||....    ..............           +   +......+.+.+++.+||+.||.+|||+.|+++
T Consensus       226 Pf~~~~----~~~~~~~~~~~~~~-----------p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          226 PFSTQM----ERVRTLTDVRNLKF-----------P---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             CCSSHH----HHHHHHHHHHTTCC-----------C---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCcc----HHHHHHHHHhcCCC-----------C---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            664311    11111111000000           0   011234455678999999999999999999985

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.93  E-value=1.7e-25  Score=150.84  Aligned_cols=139  Identities=21%  Similarity=0.345  Sum_probs=96.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc--cccccccccccccccccCCC------ccccchhhHhHHHHHHHHHhc----
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV--TQTMTMATIGYMAPEYGSEG------IVSTKCDVYSYGVLLMETFTR----   68 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~~~~pe~~~~~------~~~~~~dv~s~g~~~~~~~~~----   68 (159)
                      ||++.++.+||+|||+++.........  ......||+.|+|||++.+.      .++.++||||+|++++++++|    
T Consensus       144 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~  223 (301)
T 3q4u_A          144 ILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSN  223 (301)
T ss_dssp             EEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred             EEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCc
Confidence            578899999999999998764332221  12234689999999988776      566789999999999999999    


Q ss_pred             ------CCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           69 ------KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        69 ------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                            ..||.......................        ............+..+.+++.+||+.||.+|||+.++++
T Consensus       224 ~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          224 GIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQR--------PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             TBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC--------CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             cccccccccccccCCCCcchhhhhHHHhccCCC--------CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                  777765444333332222211111100        001111122356788999999999999999999999999


Q ss_pred             HHHHH
Q 035782          143 KLKKI  147 (159)
Q Consensus       143 ~l~~~  147 (159)
                      .|+++
T Consensus       296 ~L~~i  300 (301)
T 3q4u_A          296 TLTKI  300 (301)
T ss_dssp             HHHHH
T ss_pred             HHhcc
Confidence            99986

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.93  E-value=1.1e-25  Score=153.16  Aligned_cols=146  Identities=34%  Similarity=0.541  Sum_probs=106.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc-
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE-   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~-   79 (159)
                      |+++.++.+||+|||+++...............||+.|+|||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       170 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~  249 (321)
T 2qkw_B          170 ILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM  249 (321)
T ss_dssp             EEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSC
T ss_pred             EEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHH
Confidence            5788999999999999987543333323344568999999999888888999999999999999999999987544322 


Q ss_pred             ccHHHHHHhh-cCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKS-LSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      .....+.... ........+++.+...     .....+..+.+++.+||+.||.+|||+.++++.|+.+.+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~  317 (321)
T 2qkw_B          250 VNLAEWAVESHNNGQLEQIVDPNLADK-----IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ  317 (321)
T ss_dssp             CCHHHHTHHHHTTTCCCSSSSSSCTTC-----SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHhhhccccccHHHhcChhhccc-----cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence            2233332211 1122233333222211     23467888999999999999999999999999999998754

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=5.1e-25  Score=150.63  Aligned_cols=143  Identities=22%  Similarity=0.362  Sum_probs=97.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc--cccccccccccccccccCCCcccc------chhhHhHHHHHHHHHhc----
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV--TQTMTMATIGYMAPEYGSEGIVST------KCDVYSYGVLLMETFTR----   68 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~~~~pe~~~~~~~~~------~~dv~s~g~~~~~~~~~----   68 (159)
                      ||++.++.+||+|||+++.+.......  ......||+.|+|||++.+.....      ++||||+|++++++++|    
T Consensus       173 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~  252 (337)
T 3mdy_A          173 ILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG  252 (337)
T ss_dssp             EEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred             EEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcc
Confidence            578899999999999998764332211  122356899999999887665444      38999999999999999    


Q ss_pred             ------CCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           69 ------KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        69 ------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                            ..||.....................        .............++..+.+++.+||+.||.+|||+.++++
T Consensus       253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  324 (337)
T 3mdy_A          253 GIVEEYQLPYHDLVPSDPSYEDMREIVCIKK--------LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK  324 (337)
T ss_dssp             TBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC--------CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cccccccccHhhhcCCCCchhhhHHHHhhhc--------cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHH
Confidence                  5565544333332222221111111        11111112223477888999999999999999999999999


Q ss_pred             HHHHHHHHh
Q 035782          143 KLKKIKEKF  151 (159)
Q Consensus       143 ~l~~~~~~~  151 (159)
                      .|+++.+..
T Consensus       325 ~L~~l~~~~  333 (337)
T 3mdy_A          325 TLAKMSESQ  333 (337)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHhhc
Confidence            999998764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.92  E-value=3.2e-25  Score=153.71  Aligned_cols=134  Identities=24%  Similarity=0.378  Sum_probs=99.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............+++.|+|||++.+..++.++|+||||++++++++ |..||.......
T Consensus       234 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~  313 (370)
T 2psq_A          234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE  313 (370)
T ss_dssp             EEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             EEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            6789999999999999987654433333334457889999999988889999999999999999998 999987532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~  153 (159)
                        ....+....            ..     ..+..++..+.+++.+||+.||.+|||+.|+++.|+++.....+
T Consensus       314 --~~~~~~~~~------------~~-----~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~  368 (370)
T 2psq_A          314 --LFKLLKEGH------------RM-----DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN  368 (370)
T ss_dssp             --HHHHHHTTC------------CC-----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             --HHHHHhcCC------------CC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence              111111110            00     01224556789999999999999999999999999999876543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.92  E-value=1.6e-25  Score=154.87  Aligned_cols=143  Identities=10%  Similarity=0.058  Sum_probs=101.4

Q ss_pred             CccC--CCCceEEcccccceecCCCCCc-----ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCc
Q 035782            1 ILLD--EDMVAHVSDFGISKLLGDGDDS-----VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTD   73 (159)
Q Consensus         1 ili~--~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~   73 (159)
                      ||++  .++.+||+|||+++.+......     .......||+.|+|||++.+..++.++||||||++++++++|..||.
T Consensus       183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~  262 (364)
T 3op5_A          183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWE  262 (364)
T ss_dssp             EEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred             EEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            5677  8899999999999876432211     11123459999999999998889999999999999999999999998


Q ss_pred             ccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           74 EMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                      ..... .................++++.+..        ...+..+.+++..||..||.+||++.+|++.|+++.+..-
T Consensus       263 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~  332 (364)
T 3op5_A          263 DNLKD-PKYVRDSKIRYRENIASLMDKCFPA--------ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG  332 (364)
T ss_dssp             GGTTC-HHHHHHHHHHHHHCHHHHHHHHSCT--------TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             ccccC-HHHHHHHHHHhhhhHHHHHHHhccc--------ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence            53222 1111111111112222233322211        1345678999999999999999999999999999988653

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.92  E-value=1.4e-25  Score=156.29  Aligned_cols=140  Identities=20%  Similarity=0.151  Sum_probs=89.5

Q ss_pred             CccCCCCceEEcccccceecCCCC--CcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGD--DSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.+|.+||+|||+|+.+....  ........+||+.|+|||++.+. .++.++|+||+||++++|++|..||.+...
T Consensus       189 Il~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~  268 (398)
T 4b99_A          189 LLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY  268 (398)
T ss_dssp             EEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH
T ss_pred             cccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH
Confidence            688999999999999998764322  12233456899999999998775 568999999999999999999999975321


Q ss_pred             ccccHHHHHHhhcCCcccchh--------hhhccccchhh-----hhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVI--------DANLARDEQSF-----FVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ......+............        ...+...+...     .........+.+|+.+||..||.+|||+.|+++
T Consensus       269 --~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          269 --VHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             --HHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             --HHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence              1111111111110000000        00000000000     001123457889999999999999999999884

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.92  E-value=1.1e-24  Score=149.29  Aligned_cols=143  Identities=16%  Similarity=0.298  Sum_probs=100.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc--cccccccccccccccccCCC------ccccchhhHhHHHHHHHHHhc----
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV--TQTMTMATIGYMAPEYGSEG------IVSTKCDVYSYGVLLMETFTR----   68 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~~~~pe~~~~~------~~~~~~dv~s~g~~~~~~~~~----   68 (159)
                      ||++.++.+||+|||++..........  ......||+.|+|||.+.+.      .++.++|+||+|++++++++|    
T Consensus       178 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~  257 (342)
T 1b6c_B          178 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  257 (342)
T ss_dssp             EEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred             EEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcC
Confidence            578899999999999998765333211  12345689999999987765      344789999999999999998    


Q ss_pred             ------CCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           69 ------KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        69 ------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                            ..||............+........        .............++..+.+++.+||+.||++|||+.++++
T Consensus       258 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~  329 (342)
T 1b6c_B          258 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK--------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  329 (342)
T ss_dssp             TBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC--------CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CcccccccCccccCcCcccHHHHHHHHHHHH--------hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                  6677654433333333322211111        11111111123467788999999999999999999999999


Q ss_pred             HHHHHHHHh
Q 035782          143 KLKKIKEKF  151 (159)
Q Consensus       143 ~l~~~~~~~  151 (159)
                      .|+++.++.
T Consensus       330 ~L~~i~~~~  338 (342)
T 1b6c_B          330 TLSQLSQQE  338 (342)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHHh
Confidence            999998764

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.92  E-value=2.3e-25  Score=153.61  Aligned_cols=74  Identities=22%  Similarity=0.293  Sum_probs=57.0

Q ss_pred             CccCCC-CceEEcccccceecCCCCCc--------------------------ccccccccccccccccccCCC-ccccc
Q 035782            1 ILLDED-MVAHVSDFGISKLLGDGDDS--------------------------VTQTMTMATIGYMAPEYGSEG-IVSTK   52 (159)
Q Consensus         1 ili~~~-~~~kl~Dfg~~~~~~~~~~~--------------------------~~~~~~~gt~~~~~pe~~~~~-~~~~~   52 (159)
                      ||++.+ +.+||+|||+|+...+....                          ...+..+||++|+|||++.+. .++.+
T Consensus       148 iLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~  227 (361)
T 4f9c_A          148 FLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTA  227 (361)
T ss_dssp             EEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTH
T ss_pred             eEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCc
Confidence            577766 89999999999865432110                          012335799999999998775 58999


Q ss_pred             hhhHhHHHHHHHHHhcCCCCcc
Q 035782           53 CDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus        53 ~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      +|+||+||++++|++|+.||..
T Consensus       228 ~DiWSlG~il~ell~G~~Pf~~  249 (361)
T 4f9c_A          228 IDMWSAGVIFLSLLSGRYPFYK  249 (361)
T ss_dssp             HHHHHHHHHHHHHHHTCSSSSC
T ss_pred             cchhhhHHHHHHHHHCCCCCCC
Confidence            9999999999999999999954

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.92  E-value=8.8e-25  Score=149.01  Aligned_cols=140  Identities=36%  Similarity=0.554  Sum_probs=102.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc---c
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF---I   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~---~   77 (159)
                      ||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|+||+|++++++++|..||....   .
T Consensus       165 il~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  243 (326)
T 3uim_A          165 ILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND  243 (326)
T ss_dssp             EEECTTCCEEECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTT
T ss_pred             EEECCCCCEEeccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccc
Confidence            5788999999999999987643322 22334568999999999888889999999999999999999999996422   1


Q ss_pred             ccccHHHHHHhhcC-CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           78 GEMSLRDWVNKSLS-GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        78 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                      .......+...... .....+.+..+...     .+...+..+.+++.+||+.||.+|||+.+|++.|++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          244 DDVMLLDWVKGLLKEKKLEALVDVDLQGN-----YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             SCSBHHHHHTTTTSSCCSTTSSCTTCTTS-----CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             cchhHHHHHHHHhhchhhhhhcChhhccc-----cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            22334444433322 22222333222222     234677889999999999999999999999999974

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.92  E-value=1.5e-25  Score=150.50  Aligned_cols=134  Identities=25%  Similarity=0.412  Sum_probs=86.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||++................||+.|+|||.+.   +..++.++|+||+|++++++++|..||.....
T Consensus       151 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  230 (289)
T 3og7_A          151 IFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN  230 (289)
T ss_dssp             EEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred             EEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch
Confidence            578889999999999998654322222333456899999999876   45678899999999999999999999975432


Q ss_pred             ccccHHHHHHhh-cCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           78 GEMSLRDWVNKS-LSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        78 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                      .. ......... .......              ....++..+.+++.+||+.||.+|||+.++++.|+++.+
T Consensus       231 ~~-~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          231 RD-QIIEMVGRGSLSPDLSK--------------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HH-HHHHHHHHTSCCCCTTS--------------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HH-HHHHHhcccccCcchhh--------------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            11 111111111 1111000              112445679999999999999999999999999998764

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.91  E-value=3.1e-25  Score=154.13  Aligned_cols=132  Identities=27%  Similarity=0.433  Sum_probs=95.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............+++.|+|||.+.+..++.++||||||++++++++ |..||...... 
T Consensus       244 il~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-  322 (377)
T 3cbl_A          244 CLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-  322 (377)
T ss_dssp             EEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-
T ss_pred             EEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence            5788999999999999987543221111122335778999999988889999999999999999998 89998653221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                       .....+.....                 .+.+..++..+.+++.+||+.||.+|||+.++++.|+++.++.
T Consensus       323 -~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~  376 (377)
T 3cbl_A          323 -QTREFVEKGGR-----------------LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH  376 (377)
T ss_dssp             -HHHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             -HHHHHHHcCCC-----------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence             11111111100                 0112245567899999999999999999999999999998764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.91  E-value=2.7e-25  Score=150.69  Aligned_cols=134  Identities=22%  Similarity=0.305  Sum_probs=87.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++......  .......||+.|+|||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       170 Ill~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~-  246 (309)
T 3p86_A          170 LLVDKKYTVKVCDFGLSRLKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ-  246 (309)
T ss_dssp             EEECTTCCEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH-
T ss_pred             EEEeCCCcEEECCCCCCccccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence            578899999999999997653221  12233568999999999998889999999999999999999999986532211 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhh
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD  154 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~  154 (159)
                       ..........                ....+...+..+.+++.+||..||.+|||+.++++.|+.+.+.....
T Consensus       247 -~~~~~~~~~~----------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~  303 (309)
T 3p86_A          247 -VVAAVGFKCK----------------RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP  303 (309)
T ss_dssp             -HHHHHHHSCC----------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred             -HHHHHHhcCC----------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence             1111100000                00011234567899999999999999999999999999998765443

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.91  E-value=5.6e-25  Score=151.70  Aligned_cols=133  Identities=25%  Similarity=0.367  Sum_probs=98.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............||+.|+|||++.+..++.++||||+|++++++++ |..||.......
T Consensus       224 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  303 (359)
T 3vhe_A          224 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  303 (359)
T ss_dssp             EEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             EEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH
Confidence            5788899999999999987654444444445668899999999888889999999999999999998 999987543221


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      . ............                 .+...+..+.+++.+||+.||.+|||+.++++.|+++.+..
T Consensus       304 ~-~~~~~~~~~~~~-----------------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          304 E-FCRRLKEGTRMR-----------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             H-HHHHHHHTCCCC-----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             H-HHHHHHcCCCCC-----------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence            1 111111110000                 01134457889999999999999999999999999998754

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.91  E-value=3e-25  Score=151.86  Aligned_cols=155  Identities=17%  Similarity=0.207  Sum_probs=96.4

Q ss_pred             CccCCCCceEEcccccceecCCCCC------cccccccccccccccccccCC-------CccccchhhHhHHHHHHHHHh
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD------SVTQTMTMATIGYMAPEYGSE-------GIVSTKCDVYSYGVLLMETFT   67 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~gt~~~~~pe~~~~-------~~~~~~~dv~s~g~~~~~~~~   67 (159)
                      ||++.++.+||+|||+++.+.....      ........||+.|+|||++.+       ..++.++||||+|++++++++
T Consensus       151 ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~  230 (336)
T 3g2f_A          151 VLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM  230 (336)
T ss_dssp             EEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHh
Confidence            5788899999999999987643221      112223568999999998876       456788999999999999999


Q ss_pred             cCCCCccccc-ccccHHHHHHhhcCCcccc---hhh-hhccc-cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           68 RKKPTDEMFI-GEMSLRDWVNKSLSGELTQ---VID-ANLAR-DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        68 ~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~-~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      |..||..... ...................   .+. ..... .+.........+..+.+++.+||+.||.+|||+.|++
T Consensus       231 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l  310 (336)
T 3g2f_A          231 RCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAE  310 (336)
T ss_dssp             TBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             cCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHH
Confidence            9766432111 1100000000000000000   000 00000 0111111234677899999999999999999999999


Q ss_pred             HHHHHHHHHhhhhh
Q 035782          142 AKLKKIKEKFLDDV  155 (159)
Q Consensus       142 ~~l~~~~~~~~~~~  155 (159)
                      +.|+++.+.+....
T Consensus       311 ~~L~~ll~~~~~~~  324 (336)
T 3g2f_A          311 ERMAELMMIWERNK  324 (336)
T ss_dssp             HHHHHHHHCCCC--
T ss_pred             HHHHHHHHHHHhcc
Confidence            99999998776543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.91  E-value=4.5e-24  Score=144.34  Aligned_cols=141  Identities=25%  Similarity=0.421  Sum_probs=98.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++................|++.|+|||.+.+ .++.++|+||+|++++++++|..||........
T Consensus       164 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~  242 (307)
T 2nru_A          164 ILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL  242 (307)
T ss_dssp             EEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB
T ss_pred             EEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH
Confidence            5788999999999999987654333323334568999999998766 578899999999999999999999875432221


Q ss_pred             --cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           81 --SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        81 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                        ........ ....+...+++.+..      .+...+..+.+++.+||+.||.+|||+.++++.|+++..
T Consensus       243 ~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          243 LLDIKEEIED-EEKTIEDYIDKKMND------ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             TTHHHHHHHT-TSCCHHHHSCSSCSC------CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHHhhh-hhhhhhhhccccccc------cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence              11111111 111112222222211      123567789999999999999999999999999998754

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.91  E-value=1.8e-24  Score=150.51  Aligned_cols=134  Identities=25%  Similarity=0.369  Sum_probs=99.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+|++++++++ |..||...... 
T Consensus       222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~-  300 (382)
T 3tt0_A          222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-  300 (382)
T ss_dssp             EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred             EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence            6788999999999999987654333333344557889999999988889999999999999999998 99998653211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~  153 (159)
                       .....+.....            .     ..+..++..+.+++.+||+.||.+|||+.++++.|+++......
T Consensus       301 -~~~~~~~~~~~------------~-----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~  356 (382)
T 3tt0_A          301 -ELFKLLKEGHR------------M-----DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN  356 (382)
T ss_dssp             -HHHHHHHTTCC------------C-----CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred             -HHHHHHHcCCC------------C-----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence             11111111100            0     00123456789999999999999999999999999999876543

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.91  E-value=2.1e-24  Score=145.30  Aligned_cols=140  Identities=13%  Similarity=0.038  Sum_probs=98.5

Q ss_pred             CccCCCCc-----eEEcccccceecCCCCCc-----ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCC
Q 035782            1 ILLDEDMV-----AHVSDFGISKLLGDGDDS-----VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKK   70 (159)
Q Consensus         1 ili~~~~~-----~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~   70 (159)
                      |+++.++.     +||+|||+++........     .......||+.|+|||++.+..++.++|+||+|++++++++|..
T Consensus       137 Il~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~  216 (298)
T 1csn_A          137 FLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSL  216 (298)
T ss_dssp             EEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             EEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCC
Confidence            46766655     999999999876543221     12234568999999999988889999999999999999999999


Q ss_pred             CCcccccccc-cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           71 PTDEMFIGEM-SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        71 p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                      ||........ .....+....           ...  .........+..+.+++.+||+.||++|||+.+|++.|+++.+
T Consensus       217 pf~~~~~~~~~~~~~~~~~~~-----------~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~  283 (298)
T 1csn_A          217 PWQGLKAATNKQKYERIGEKK-----------QST--PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  283 (298)
T ss_dssp             TTSSCCSCCHHHHHHHHHHHH-----------HHS--CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             CcchhhccccHHHHHHHHhhc-----------cCc--cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence            9976432111 1111110000           000  0000111345678999999999999999999999999999998


Q ss_pred             Hhhh
Q 035782          150 KFLD  153 (159)
Q Consensus       150 ~~~~  153 (159)
                      +.-.
T Consensus       284 ~~~~  287 (298)
T 1csn_A          284 RLNT  287 (298)
T ss_dssp             HTTC
T ss_pred             hcCC
Confidence            7643

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.91  E-value=5.8e-25  Score=150.09  Aligned_cols=132  Identities=24%  Similarity=0.353  Sum_probs=95.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............+|+.|+|||++.+..++.++|+||+|++++++++ |..||.......
T Consensus       148 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  227 (327)
T 3poz_A          148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  227 (327)
T ss_dssp             EEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             EEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH
Confidence            5788899999999999987754443333334457889999999988889999999999999999999 999987543221


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                        ....+.....            .     ..+..++..+.+++.+||+.||.+|||+.++++.|+.+.+..
T Consensus       228 --~~~~~~~~~~------------~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~  280 (327)
T 3poz_A          228 --ISSILEKGER------------L-----PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             --HHHHHHTTCC------------C-----CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred             --HHHHHHcCCC------------C-----CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence              1111111100            0     011234567889999999999999999999999999987643

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.91  E-value=2.7e-24  Score=144.60  Aligned_cols=139  Identities=13%  Similarity=0.064  Sum_probs=98.6

Q ss_pred             Ccc---CCCCceEEcccccceecCCCCCc-----ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCC
Q 035782            1 ILL---DEDMVAHVSDFGISKLLGDGDDS-----VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPT   72 (159)
Q Consensus         1 ili---~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~   72 (159)
                      ||+   +.++.+||+|||+++........     .......||+.|+|||.+.+..++.++||||+|++++++++|..||
T Consensus       136 Il~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  215 (296)
T 4hgt_A          136 FLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW  215 (296)
T ss_dssp             EEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             eeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCC
Confidence            456   67889999999999876543221     1123456899999999999888999999999999999999999999


Q ss_pred             cccccccc-cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           73 DEMFIGEM-SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        73 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      ........ .....+.           .......  ........+..+.+++..||+.||.+|||+.++++.|+++.++.
T Consensus       216 ~~~~~~~~~~~~~~~~-----------~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~  282 (296)
T 4hgt_A          216 QGLKAATKRQKYERIS-----------EKKMSTP--IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             SSCCCSSSSSHHHHHH-----------HHHHHSC--HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             cccchhhhhhhhhhhh-----------cccccch--hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence            76432211 1111000           0000000  00001133567899999999999999999999999999998876


Q ss_pred             h
Q 035782          152 L  152 (159)
Q Consensus       152 ~  152 (159)
                      -
T Consensus       283 ~  283 (296)
T 4hgt_A          283 G  283 (296)
T ss_dssp             T
T ss_pred             C
Confidence            4

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=7.5e-25  Score=150.33  Aligned_cols=138  Identities=20%  Similarity=0.307  Sum_probs=96.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||++................||+.|+|||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       203 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  282 (344)
T 1rjb_A          203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA  282 (344)
T ss_dssp             EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             EEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH
Confidence            5788899999999999987654433333344567889999999888888999999999999999998 999987543211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhhc
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDVA  156 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~~~  156 (159)
                       ...........            .     ..+...+..+.+++.+||..||.+|||+.++++.|+.+.....+++.
T Consensus       283 -~~~~~~~~~~~------------~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~  341 (344)
T 1rjb_A          283 -NFYKLIQNGFK------------M-----DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAMY  341 (344)
T ss_dssp             -HHHHHHHTTCC------------C-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--------
T ss_pred             -HHHHHHhcCCC------------C-----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHHHh
Confidence             11111111100            0     01123456789999999999999999999999999999888776654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.91  E-value=1.7e-24  Score=157.93  Aligned_cols=120  Identities=19%  Similarity=0.244  Sum_probs=87.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-CCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.+|.+||+|||+|+.+....    ....+||+.|+|||++. +..|+.++|+||+||++|+|++|..||......+
T Consensus       323 ILld~~G~vKL~DFGlA~~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~  398 (689)
T 3v5w_A          323 ILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD  398 (689)
T ss_dssp             EEECTTSCEEECCCTTCEECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC
T ss_pred             eEEeCCCCEEecccceeeecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            689999999999999998874322    23468999999999986 4579999999999999999999999997543222


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAA  141 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll  141 (159)
                      ..  ..........        +       ..+....+.+.+++.+||..||.+|++     +.||+
T Consensus       399 ~~--~i~~~i~~~~--------~-------~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~  448 (689)
T 3v5w_A          399 KH--EIDRMTLTMA--------V-------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK  448 (689)
T ss_dssp             HH--HHHHHHHHCC--------C-------CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred             HH--HHHHhhcCCC--------C-------CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence            11  1111000000        0       001234557889999999999999998     57766

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.91  E-value=1.2e-24  Score=147.46  Aligned_cols=136  Identities=21%  Similarity=0.406  Sum_probs=96.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc------------cccccccccccccccccCCCccccchhhHhHHHHHHHHHhc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV------------TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTR   68 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~------------~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~   68 (159)
                      ||++.++.+||+|||+++.........            ......||+.|+|||++.+..++.++||||+|++++++++|
T Consensus       139 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g  218 (310)
T 3s95_A          139 CLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGR  218 (310)
T ss_dssp             EEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHT
T ss_pred             EEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcC
Confidence            578899999999999998764322211            01135689999999999988899999999999999999999


Q ss_pred             CCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           69 KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        69 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                      ..|+..........        ..........         ..+..++..+.+++.+||+.||.+|||+.++++.|+++.
T Consensus       219 ~~~~~~~~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~  281 (310)
T 3s95_A          219 VNADPDYLPRTMDF--------GLNVRGFLDR---------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR  281 (310)
T ss_dssp             CCSSTTTSCBCTTS--------SBCHHHHHHH---------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCcchhhhHHHH--------hhhhhccccc---------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            98876432211100        0000000010         011234557889999999999999999999999999998


Q ss_pred             HHhhh
Q 035782          149 EKFLD  153 (159)
Q Consensus       149 ~~~~~  153 (159)
                      ..+..
T Consensus       282 ~~~~~  286 (310)
T 3s95_A          282 MHLAG  286 (310)
T ss_dssp             HHHHH
T ss_pred             HhccC
Confidence            87653

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.91  E-value=1.7e-24  Score=157.16  Aligned_cols=123  Identities=17%  Similarity=0.140  Sum_probs=88.4

Q ss_pred             CccCC--CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDE--DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++.  .+.+||+|||+|+.+....   .....+||+.|+|||++.+..|+.++|+||+||++|+|++|..||..... 
T Consensus       286 ill~~~~~~~vKl~DFG~a~~~~~~~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~-  361 (573)
T 3uto_A          286 IMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-  361 (573)
T ss_dssp             EEESSSSCCCEEECCCSSCEECCTTS---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-
T ss_pred             ccccCCCCCCEEEeeccceeEccCCC---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-
Confidence            45664  4899999999999875332   23346799999999999999999999999999999999999999975321 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ......+..... ...             ..........+.+++.+||..||.+|||+.|+++
T Consensus       362 -~~~~~~i~~~~~-~~~-------------~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          362 -DETLRNVKSCDW-NMD-------------DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             -HHHHHHHHTTCC-CCC-------------SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -HHHHHHHHhCCC-CCC-------------cccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             111111111100 000             0011134556889999999999999999999986

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.90  E-value=2.3e-24  Score=146.82  Aligned_cols=133  Identities=23%  Similarity=0.366  Sum_probs=89.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............+++.|+|||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       168 Ili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~  247 (323)
T 3qup_A          168 CMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE  247 (323)
T ss_dssp             EEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             EEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH
Confidence            5788999999999999987654333323333456788999999888888999999999999999999 899987533211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                        ....+....           ..      ..+...+..+.+++.+||+.||.+|||+.++++.|+++.+..-
T Consensus       248 --~~~~~~~~~-----------~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~  301 (323)
T 3qup_A          248 --IYNYLIGGN-----------RL------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS  301 (323)
T ss_dssp             --HHHHHHTTC-----------CC------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             --HHHHHhcCC-----------CC------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence              111111100           00      0112345678999999999999999999999999999987654

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.90  E-value=2.8e-24  Score=145.61  Aligned_cols=134  Identities=19%  Similarity=0.321  Sum_probs=98.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............+++.|+|||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  255 (313)
T 1t46_A          176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS  255 (313)
T ss_dssp             EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh
Confidence            5788899999999999987754443333344557889999999888888999999999999999998 999986543211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                       ...........            ..     .+...+..+.+++.+||+.||.+|||+.++++.|+++.++..
T Consensus       256 -~~~~~~~~~~~------------~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  310 (313)
T 1t46_A          256 -KFYKMIKEGFR------------ML-----SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST  310 (313)
T ss_dssp             -HHHHHHHHTCC------------CC-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             -HHHHHhccCCC------------CC-----CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence             11111111110            00     011345678999999999999999999999999999987654

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.90  E-value=4.8e-24  Score=143.46  Aligned_cols=140  Identities=13%  Similarity=0.053  Sum_probs=98.7

Q ss_pred             Ccc---CCCCceEEcccccceecCCCCCcc-----cccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCC
Q 035782            1 ILL---DEDMVAHVSDFGISKLLGDGDDSV-----TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPT   72 (159)
Q Consensus         1 ili---~~~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~   72 (159)
                      |++   +.++.+||+|||++..........     ......||+.|+|||.+.+..++.++|+||+|++++++++|..||
T Consensus       136 Il~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  215 (296)
T 3uzp_A          136 FLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW  215 (296)
T ss_dssp             EEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             eEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence            456   478899999999998765432211     123456899999999999888999999999999999999999999


Q ss_pred             ccccccc-ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           73 DEMFIGE-MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        73 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      ....... ......+.           .......  ........+..+.+++.+||+.||++|||+.++++.|+++.++.
T Consensus       216 ~~~~~~~~~~~~~~~~-----------~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          216 QGLKAATKRQKYERIS-----------EKKMSTP--IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             SSCCCSSSSSHHHHHH-----------HHHHHSC--HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             CCcCchhhhhhhhhhc-----------ccccCCc--hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence            7643211 11111110           0000000  00011234567899999999999999999999999999998775


Q ss_pred             hh
Q 035782          152 LD  153 (159)
Q Consensus       152 ~~  153 (159)
                      -.
T Consensus       283 ~~  284 (296)
T 3uzp_A          283 GF  284 (296)
T ss_dssp             TC
T ss_pred             CC
Confidence            43

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.90  E-value=3.9e-24  Score=144.99  Aligned_cols=131  Identities=28%  Similarity=0.399  Sum_probs=97.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............+++.|+|||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  260 (314)
T 2ivs_A          181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER  260 (314)
T ss_dssp             EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            5788899999999999987654333333334457888999999988888999999999999999999 999986533211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                        ....+.....            .     ..+...+..+.+++.+||+.||.+|||+.++++.|+++.++
T Consensus       261 --~~~~~~~~~~------------~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          261 --LFNLLKTGHR------------M-----ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             --HHHHHHTTCC------------C-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             --HHHHhhcCCc------------C-----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence              1111111100            0     01124456789999999999999999999999999998764

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.90  E-value=2.6e-24  Score=145.98  Aligned_cols=133  Identities=25%  Similarity=0.372  Sum_probs=98.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............||+.|+|||++.+..++.++|+||+|++++++++ |..||.......
T Consensus       179 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~  258 (316)
T 2xir_A          179 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  258 (316)
T ss_dssp             EEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH
T ss_pred             EEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH
Confidence            5788889999999999987654443333444567889999999888888999999999999999998 999986543221


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                       .............                 .+...+..+.+++.+||+.||.+|||+.++++.|+++.+.-
T Consensus       259 -~~~~~~~~~~~~~-----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  312 (316)
T 2xir_A          259 -EFCRRLKEGTRMR-----------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  312 (316)
T ss_dssp             -HHHHHHHHTCCCC-----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             -HHHHHhccCccCC-----------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence             1111111111000                 01123457889999999999999999999999999998754

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.90  E-value=7.6e-25  Score=147.44  Aligned_cols=146  Identities=23%  Similarity=0.379  Sum_probs=93.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++........ .......++..|+|||.+.+..++.++||||+|++++++++|..|+...... 
T Consensus       145 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~-  223 (295)
T 3ugc_A          145 ILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE-  223 (295)
T ss_dssp             EEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH-
T ss_pred             EEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH-
Confidence            57888899999999999876433221 1222344677899999998888999999999999999999999887542111 


Q ss_pred             ccHHHHHHhhcCCcc--cchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGEL--TQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                        .............  ..+... +.. ....+.+..++..+.+++.+||+.||.+|||+.++++.|+++.+.+
T Consensus       224 --~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          224 --FMRMIGNDKQGQMIVFHLIEL-LKN-NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             --HHHHHCTTCCTHHHHHHHHHH-HHT-TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             --HHhhhcCccccchhHHHHHHH-Hhc-cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence              1111100000000  000000 000 0011123356678999999999999999999999999999998765

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.90  E-value=4.9e-24  Score=144.60  Aligned_cols=134  Identities=24%  Similarity=0.373  Sum_probs=90.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++................+++.|+|||.+.+..++.++|+||+|++++++++ |..||...... 
T Consensus       178 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-  256 (313)
T 3brb_A          178 CMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-  256 (313)
T ss_dssp             EEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-
T ss_pred             EEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-
Confidence            5788999999999999987644332222333457788999999988888999999999999999999 88888653221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~  153 (159)
                       ...........           .      ..+...+..+.+++.+||..||.+|||+.++++.|+++.+.+.+
T Consensus       257 -~~~~~~~~~~~-----------~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~  312 (313)
T 3brb_A          257 -EMYDYLLHGHR-----------L------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD  312 (313)
T ss_dssp             -GHHHHHHTTCC-----------C------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred             -HHHHHHHcCCC-----------C------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence             11111111000           0      01123456789999999999999999999999999999987653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.90  E-value=1.4e-24  Score=148.04  Aligned_cols=132  Identities=23%  Similarity=0.341  Sum_probs=95.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............+++.|+|||++.+..++.++|+||+|++++++++ |..||...... 
T Consensus       146 il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-  224 (325)
T 3kex_A          146 VLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA-  224 (325)
T ss_dssp             EEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT-
T ss_pred             EEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH-
Confidence            5788999999999999988754444333444567889999999988889999999999999999999 99998754321 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                       .....+......                 ..+..++..+.+++.+||..||.+|||+.++++.|+++.+..
T Consensus       225 -~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~  278 (325)
T 3kex_A          225 -EVPDLLEKGERL-----------------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP  278 (325)
T ss_dssp             -HHHHHHHTTCBC-----------------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred             -HHHHHHHcCCCC-----------------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence             111111111000                 001123345778999999999999999999999999987643

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.90  E-value=2.3e-24  Score=147.13  Aligned_cols=132  Identities=24%  Similarity=0.353  Sum_probs=89.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............+++.|+|||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       148 Il~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~  227 (327)
T 3lzb_A          148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  227 (327)
T ss_dssp             EEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             EEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Confidence            5788889999999999987654333333333456788999999988889999999999999999999 999987543221


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                        ....+.....                 .+.+...+..+.+++.+||+.||.+|||+.++++.|+++.+..
T Consensus       228 --~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  280 (327)
T 3lzb_A          228 --ISSILEKGER-----------------LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             --HHHHHHTTCC-----------------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred             --HHHHHHcCCC-----------------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence              1111111100                 0011234557889999999999999999999999999998554

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.90  E-value=4.3e-24  Score=145.73  Aligned_cols=137  Identities=28%  Similarity=0.401  Sum_probs=95.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||+++........ .......+|+.|+|||++.+..++.++||||+|++++++++ |..||......
T Consensus       182 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~  261 (325)
T 3kul_A          182 VLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR  261 (325)
T ss_dssp             EEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH
T ss_pred             EEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH
Confidence            57889999999999999876533221 12223346778999999988889999999999999999998 99998653221


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhhc
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDVA  156 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~~~  156 (159)
                      .  ....+.....                 .+.+..++..+.+++..||..||.+|||+.++++.|+++.+......+
T Consensus       262 ~--~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~~~  320 (325)
T 3kul_A          262 D--VISSVEEGYR-----------------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRA  320 (325)
T ss_dssp             H--HHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC----
T ss_pred             H--HHHHHHcCCC-----------------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcccccc
Confidence            1  1111111000                 001124556789999999999999999999999999999887655433

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.90  E-value=3.4e-24  Score=146.48  Aligned_cols=134  Identities=20%  Similarity=0.346  Sum_probs=97.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............+++.|+|||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       195 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  274 (333)
T 2i1m_A          195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS  274 (333)
T ss_dssp             CEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred             EEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence            6788899999999999987644333333344557889999999888888999999999999999998 888986533211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                      . ..........            ..     .+...+..+.+++..||+.||.+|||+.++++.|+++.++..
T Consensus       275 ~-~~~~~~~~~~------------~~-----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  329 (333)
T 2i1m_A          275 K-FYKLVKDGYQ------------MA-----QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR  329 (333)
T ss_dssp             H-HHHHHHHTCC------------CC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             H-HHHHHhcCCC------------CC-----CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence            1 1111111110            00     011234578899999999999999999999999999887654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.90  E-value=2.2e-24  Score=145.47  Aligned_cols=123  Identities=17%  Similarity=0.183  Sum_probs=89.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++........  ......||+.|+|||++.+..++.++|+||+|++++++++|..||........
T Consensus       147 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  224 (297)
T 3fxz_A          147 ILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA  224 (297)
T ss_dssp             EEECTTCCEEECCCTTCEECCSTTC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             EEECCCCCEEEeeCCCceecCCccc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            5788999999999999987643222  23345799999999999888899999999999999999999999865321111


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ...+.......               ...+...+..+.+++.+||+.||.+|||+.|+++
T Consensus       225 --~~~~~~~~~~~---------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          225 --LYLIATNGTPE---------------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             --HHHHHHHCSCC---------------CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             --HHHHHhCCCCC---------------CCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence              00011000000               0011234567889999999999999999999985

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.90  E-value=4.1e-24  Score=147.19  Aligned_cols=143  Identities=7%  Similarity=0.039  Sum_probs=99.6

Q ss_pred             CccCCCC--ceEEcccccceecCCCCCc-----ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCc
Q 035782            1 ILLDEDM--VAHVSDFGISKLLGDGDDS-----VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTD   73 (159)
Q Consensus         1 ili~~~~--~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~   73 (159)
                      ||++.++  .+||+|||+++.+......     .......||+.|+|||++.+..++.++|+||+|++++++++|..||.
T Consensus       190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~  269 (352)
T 2jii_A          190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT  269 (352)
T ss_dssp             EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred             EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            5778887  8999999999876432211     11233468999999999988889999999999999999999999997


Q ss_pred             ccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           74 EMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                      ................. .....+.....        .....+..+.+++.+||+.||.+|||+.++++.|+++.++.-
T Consensus       270 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          270 NCLPNTEDIMKQKQKFV-DKPGPFVGPCG--------HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             GGTTCHHHHHHHHHHHH-HSCCCEECTTS--------CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             cCCcCHHHHHHHHHhcc-CChhhhhhhcc--------ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence            65422222222111110 00011111000        001235678999999999999999999999999999988764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.90  E-value=5.4e-25  Score=149.71  Aligned_cols=150  Identities=22%  Similarity=0.323  Sum_probs=100.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++......... .......+++.|+|||++.+..++.++|+||+|++++++++|..||.......
T Consensus       165 il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~  244 (318)
T 3lxp_A          165 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF  244 (318)
T ss_dssp             EEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH
T ss_pred             EEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh
Confidence            57889999999999999887543322 12233457888999999988888999999999999999999999986432111


Q ss_pred             ccHHHHHHhhc-CCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhh
Q 035782           80 MSLRDWVNKSL-SGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDV  155 (159)
Q Consensus        80 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~~  155 (159)
                      .....+..... .......+....     ....+..++..+.+++.+||+.||.+|||+.++++.|+++.+++....
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~~  316 (318)
T 3lxp_A          245 LELIGIAQGQMTVLRLTELLERGE-----RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQA  316 (318)
T ss_dssp             HHHHCSCCHHHHHHHHHHHHHTTC-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC--
T ss_pred             hhhhcccccchhHHHHHHHHhccc-----CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccCC
Confidence            00000000000 000001111110     011123456789999999999999999999999999999999887543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.90  E-value=1e-23  Score=144.31  Aligned_cols=134  Identities=23%  Similarity=0.371  Sum_probs=98.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............+++.|+|||++.+..++.++|+||+|++++++++ |..||...... 
T Consensus       188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-  266 (334)
T 2pvf_A          188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-  266 (334)
T ss_dssp             EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred             EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH-
Confidence            5788999999999999987654333223333456788999999888888999999999999999998 99998653211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~  153 (159)
                       .....+.....            .     ..+..++..+.+++.+||+.||.+|||+.++++.|+++......
T Consensus       267 -~~~~~~~~~~~------------~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~  322 (334)
T 2pvf_A          267 -ELFKLLKEGHR------------M-----DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN  322 (334)
T ss_dssp             -HHHHHHHHTCC------------C-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             -HHHHHHhcCCC------------C-----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence             11111111100            0     01123456788999999999999999999999999999876543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.90  E-value=6.8e-24  Score=143.68  Aligned_cols=130  Identities=26%  Similarity=0.345  Sum_probs=89.2

Q ss_pred             CccCCCCc-eEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMV-AHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~-~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++. +||+|||++......     .....||+.|+|||++.+..++.++|+||+|++++++++|..||.......
T Consensus       136 Ill~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~  210 (307)
T 2eva_A          136 LLLVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA  210 (307)
T ss_dssp             EEEETTTTEEEECCCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH
T ss_pred             EEEeCCCCEEEEcccccccccccc-----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH
Confidence            46777775 799999999765321     122458999999999988889999999999999999999999987532221


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                      ............   .              ..+...+..+.+++.+||+.||.+|||+.++++.|+.+.+.+.
T Consensus       211 ~~~~~~~~~~~~---~--------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  266 (307)
T 2eva_A          211 FRIMWAVHNGTR---P--------------PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP  266 (307)
T ss_dssp             HHHHHHHHTTCC---C--------------CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred             HHHHHHHhcCCC---C--------------CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence            111111111000   0              0011345578899999999999999999999999999987654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.90  E-value=1.1e-23  Score=149.38  Aligned_cols=127  Identities=26%  Similarity=0.401  Sum_probs=94.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++......     ....+++.|+|||++.+..++.++||||||++++++++ |..||.......
T Consensus       320 ill~~~~~~kl~DfG~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~  394 (450)
T 1k9a_A          320 VLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD  394 (450)
T ss_dssp             EEECTTSCEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT
T ss_pred             EEECCCCCEEEeeCCCcccccccc-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            578899999999999998653211     12346788999999988889999999999999999998 999987543211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                        ....+....                 ....+..++..+.+++.+||+.||.+|||+.++++.|+.+...-
T Consensus       395 --~~~~i~~~~-----------------~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~  447 (450)
T 1k9a_A          395 --VVPRVEKGY-----------------KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE  447 (450)
T ss_dssp             --HHHHHHTTC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             --HHHHHHcCC-----------------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence              111111110                 00112355678999999999999999999999999999998754

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=7.4e-24  Score=146.99  Aligned_cols=136  Identities=22%  Similarity=0.359  Sum_probs=89.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCc--ccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS--VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~   77 (159)
                      ||++.++.+||+|||+++........  .......+++.|+|||++.+..++.++|+||+|++++++++ |..||.....
T Consensus       223 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~  302 (373)
T 3c1x_A          223 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT  302 (373)
T ss_dssp             EEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS
T ss_pred             EEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH
Confidence            57889999999999999865432211  11233456788999999988889999999999999999999 6677754322


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhh
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDV  155 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~~  155 (159)
                      .  .....+.....                 ...+..++..+.+++.+||+.||.+|||+.++++.|+++...+..+.
T Consensus       303 ~--~~~~~~~~~~~-----------------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~  361 (373)
T 3c1x_A          303 F--DITVYLLQGRR-----------------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH  361 (373)
T ss_dssp             S--CHHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred             H--HHHHHHHcCCC-----------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence            1  11111111100                 00112345678999999999999999999999999999998876554

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.89  E-value=2.7e-24  Score=147.79  Aligned_cols=139  Identities=14%  Similarity=0.113  Sum_probs=94.1

Q ss_pred             CccCCCC--ceEEcccccceecCCCCCc-----ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCc
Q 035782            1 ILLDEDM--VAHVSDFGISKLLGDGDDS-----VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTD   73 (159)
Q Consensus         1 ili~~~~--~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~   73 (159)
                      ||++.++  .+||+|||+++.+......     .......||+.|+|||++.+..++.++|+||+|++++++++|..||.
T Consensus       182 Ill~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~  261 (345)
T 2v62_A          182 LLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWE  261 (345)
T ss_dssp             EEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTG
T ss_pred             EEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            5677666  9999999999876432111     11234568999999999988888999999999999999999999996


Q ss_pred             ccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           74 EMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                      ............... ........+.....        ....+..+.+++..||..||.+|||+.+|++.|+++.
T Consensus       262 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          262 QNLKDPVAVQTAKTN-LLDELPQSVLKWAP--------SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             GGTTCHHHHHHHHHH-HHHTTTHHHHHHSC--------TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             ccccccHHHHHHHHh-hcccccHHHHhhcc--------ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            432221111111111 00001111110000        0134567999999999999999999999999998754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.89  E-value=1.9e-23  Score=142.78  Aligned_cols=138  Identities=12%  Similarity=0.046  Sum_probs=96.7

Q ss_pred             CccCCCCc-----eEEcccccceecCCCCCcc-----cccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCC
Q 035782            1 ILLDEDMV-----AHVSDFGISKLLGDGDDSV-----TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKK   70 (159)
Q Consensus         1 ili~~~~~-----~kl~Dfg~~~~~~~~~~~~-----~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~   70 (159)
                      ||++.++.     +||+|||+++.+.......     ......||+.|+|||++.+..++.++|+||+|++++++++|..
T Consensus       136 ill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~  215 (330)
T 2izr_A          136 FLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSL  215 (330)
T ss_dssp             EEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             eeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCC
Confidence            56777776     9999999998764432211     1234679999999999998889999999999999999999999


Q ss_pred             CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           71 PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        71 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      ||........  ...+...        ..... ..+.. ......+ .+.+++..||..||.+||++.+|++.|+++.+.
T Consensus       216 Pf~~~~~~~~--~~~~~~i--------~~~~~-~~~~~-~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~  282 (330)
T 2izr_A          216 PWQGLKADTL--KERYQKI--------GDTKR-ATPIE-VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR  282 (330)
T ss_dssp             TTTTCCCSSH--HHHHHHH--------HHHHH-HSCHH-HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             CccccccccH--HHHHHHH--------Hhhhc-cCCHH-HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence            9976432211  1111100        00000 00000 0001233 899999999999999999999999999998876


Q ss_pred             h
Q 035782          151 F  151 (159)
Q Consensus       151 ~  151 (159)
                      .
T Consensus       283 ~  283 (330)
T 2izr_A          283 K  283 (330)
T ss_dssp             T
T ss_pred             c
Confidence            5

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.89  E-value=3.5e-24  Score=148.38  Aligned_cols=132  Identities=22%  Similarity=0.324  Sum_probs=94.2

Q ss_pred             CccCCCC---ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccc
Q 035782            1 ILLDEDM---VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~   76 (159)
                      ||++.++   .+||+|||+++...............||+.|+|||++.+..++.++||||+|++++++++ |..||....
T Consensus       212 Ill~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~  291 (367)
T 3l9p_A          212 CLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS  291 (367)
T ss_dssp             EEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             EEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            5677444   599999999976532222222333567889999999888889999999999999999998 999986532


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      ..  .....+.....            .     ..+..++..+.+++.+||+.||.+|||+.++++.|+.+.+..
T Consensus       292 ~~--~~~~~i~~~~~------------~-----~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~  347 (367)
T 3l9p_A          292 NQ--EVLEFVTSGGR------------M-----DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  347 (367)
T ss_dssp             HH--HHHHHHHTTCC------------C-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             HH--HHHHHHHcCCC------------C-----CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence            11  11111111100            0     001234567889999999999999999999999999987754

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=2.3e-23  Score=140.22  Aligned_cols=137  Identities=23%  Similarity=0.322  Sum_probs=97.4

Q ss_pred             CccCCCCceEEcccccceecCCCCC--cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD--SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||+++.......  ........+++.|+|||...+..++.++|+||+|++++++++|..|+..... 
T Consensus       155 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-  233 (298)
T 3pls_A          155 CMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-  233 (298)
T ss_dssp             EEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-
T ss_pred             EEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-
Confidence            5788999999999999986543221  1122234578899999999888899999999999999999996655432111 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhh
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDV  155 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~~  155 (159)
                      ..............                 ..+...+..+.+++.+||+.||.+|||+.++++.|+++.+.+..+.
T Consensus       234 ~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~  293 (298)
T 3pls_A          234 PFDLTHFLAQGRRL-----------------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH  293 (298)
T ss_dssp             GGGHHHHHHTTCCC-----------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred             HHHHHHHhhcCCCC-----------------CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence            11121211111100                 0112345578899999999999999999999999999999887654

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.89  E-value=5.7e-24  Score=145.01  Aligned_cols=125  Identities=24%  Similarity=0.295  Sum_probs=90.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||++..+.............||+.|+|||++.+..+ +.++|+||+|++++++++|..||.......
T Consensus       136 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~  215 (323)
T 3tki_A          136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC  215 (323)
T ss_dssp             EEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS
T ss_pred             EEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH
Confidence            5788999999999999987643333333344679999999999877654 778999999999999999999997543322


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....+.......                 .........+.+++.+||+.||.+|||+.|+++
T Consensus       216 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          216 QEYSDWKEKKTYL-----------------NPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             HHHHHHHTTCTTS-----------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHhcccccC-----------------CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            2222222111000                 001134456789999999999999999999975

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.89  E-value=9.2e-24  Score=141.29  Aligned_cols=131  Identities=21%  Similarity=0.346  Sum_probs=86.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++........ ......+++.|+|||++.+..++.++|+||+|++++++++ |..||......+
T Consensus       147 il~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~  225 (281)
T 1mp8_A          147 VLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND  225 (281)
T ss_dssp             EEEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             EEECCCCCEEECccccccccCccccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH
Confidence            57788899999999999876432221 2223446788999999888788999999999999999996 889987543221


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                        ....+.....                 ...+...+..+.+++.+||+.||.+|||+.++++.|+++.++.
T Consensus       226 --~~~~i~~~~~-----------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  278 (281)
T 1mp8_A          226 --VIGRIENGER-----------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  278 (281)
T ss_dssp             --HHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             --HHHHHHcCCC-----------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence              1111111000                 0011245567889999999999999999999999999998763

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.89  E-value=1.9e-23  Score=149.02  Aligned_cols=137  Identities=15%  Similarity=0.100  Sum_probs=98.5

Q ss_pred             Ccc---CCCCceEEcccccceecCCCCCcc-----cccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCC
Q 035782            1 ILL---DEDMVAHVSDFGISKLLGDGDDSV-----TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPT   72 (159)
Q Consensus         1 ili---~~~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~   72 (159)
                      ||+   +.++.+||+|||+++.+.......     ......||+.|+|||++.+..++.++||||||++++++++|..||
T Consensus       134 ILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf  213 (483)
T 3sv0_A          134 FLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW  213 (483)
T ss_dssp             EEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             EEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence            466   578899999999998875433211     122456899999999999988999999999999999999999999


Q ss_pred             ccccccccc--HHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           73 DEMFIGEMS--LRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        73 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      .........  +...........    +.          .....++..+.+++..||+.||.+||++.+|++.|+++...
T Consensus       214 ~~~~~~~~~~~~~~i~~~~~~~~----~~----------~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~  279 (483)
T 3sv0_A          214 QGLKAGTKKQKYEKISEKKVATS----IE----------ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR  279 (483)
T ss_dssp             SSCCCSSHHHHHHHHHHHHHHSC----HH----------HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccccchhHHHHHHHHhhcccccc----HH----------HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence            764432211  111111100000    00          00113456789999999999999999999999999999775


Q ss_pred             h
Q 035782          151 F  151 (159)
Q Consensus       151 ~  151 (159)
                      .
T Consensus       280 ~  280 (483)
T 3sv0_A          280 E  280 (483)
T ss_dssp             T
T ss_pred             c
Confidence            4

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.89  E-value=2.7e-24  Score=147.46  Aligned_cols=134  Identities=25%  Similarity=0.364  Sum_probs=94.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............+++.|+|||.+.+..++.++|+||+|++++++++ |..||...... 
T Consensus       205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-  283 (343)
T 1luf_A          205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE-  283 (343)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-
T ss_pred             EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH-
Confidence            5788899999999999987643322222334567889999999888888999999999999999998 99998653211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~  153 (159)
                       .....+..   ...        ..      .+..++..+.+++.+||+.||.+|||+.++++.|+++.++...
T Consensus       284 -~~~~~~~~---~~~--------~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~  339 (343)
T 1luf_A          284 -EVIYYVRD---GNI--------LA------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEG  339 (343)
T ss_dssp             -HHHHHHHT---TCC--------CC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC----
T ss_pred             -HHHHHHhC---CCc--------CC------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhh
Confidence             11111111   000        00      1124456789999999999999999999999999998876543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.89  E-value=1.2e-23  Score=146.66  Aligned_cols=140  Identities=23%  Similarity=0.219  Sum_probs=87.6

Q ss_pred             CccCCCCceEEcccccceecCCCCC-------------------cccccccccccccccccccCC-CccccchhhHhHHH
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD-------------------SVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGV   60 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~-------------------~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~   60 (159)
                      ||++.++.+||+|||+++.+.....                   ....+..+||++|+|||++.+ ..++.++|+||+||
T Consensus       140 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~  219 (388)
T 3oz6_A          140 ILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGC  219 (388)
T ss_dssp             EEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHH
T ss_pred             eEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHH
Confidence            5889999999999999987632110                   112234579999999998876 57899999999999


Q ss_pred             HHHHHHhcCCCCcccccccccHHHHHHhhcCCc------------ccchhhhhccc-------cc----------hhhhh
Q 035782           61 LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGE------------LTQVIDANLAR-------DE----------QSFFV  111 (159)
Q Consensus        61 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-------~~----------~~~~~  111 (159)
                      +++++++|..||......+ .+.... ......            ....+......       ..          .....
T Consensus       220 il~ell~g~~pf~~~~~~~-~~~~i~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (388)
T 3oz6_A          220 ILGEILCGKPIFPGSSTMN-QLERII-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINP  297 (388)
T ss_dssp             HHHHHHHSSCSCCCSSHHH-HHHHHH-HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCT
T ss_pred             HHHHHHhCCCCCCCCCHHH-HHHHHH-HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccc
Confidence            9999999999997532211 111111 111000            00000000000       00          00000


Q ss_pred             chHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782          112 KMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus       112 ~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....+.+.+++.+||..||.+|||+.|+++
T Consensus       298 ~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~  328 (388)
T 3oz6_A          298 KADCNEEALDLLDKLLQFNPNKRISANDALK  328 (388)
T ss_dssp             TCCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             cccCCHHHHHHHHHhhccCcccCCCHHHHhC
Confidence            1134567899999999999999999999985

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.89  E-value=1.7e-23  Score=145.11  Aligned_cols=138  Identities=9%  Similarity=0.065  Sum_probs=94.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||+++.....     .....+++.|+|||++.+  ..++.++|+||+|++++++++|..||......
T Consensus       225 Ill~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~  299 (371)
T 3q60_A          225 LFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG  299 (371)
T ss_dssp             EEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred             EEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence            68899999999999999876321     112446799999999887  67899999999999999999999999764321


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH--HHHHHHHHHhhhh
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA--AKLKKIKEKFLDD  154 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll--~~l~~~~~~~~~~  154 (159)
                      ...           .................+.....+..+.+++.+||+.||.+|||+.+++  ..++++.......
T Consensus       300 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~~  366 (371)
T 3q60_A          300 IKG-----------SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSS  366 (371)
T ss_dssp             CTT-----------CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHHHHHH
T ss_pred             ccc-----------chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHHHhhh
Confidence            100           0000000000000001111124466789999999999999999999998  4666666655443

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.89  E-value=2.4e-23  Score=140.29  Aligned_cols=135  Identities=22%  Similarity=0.349  Sum_probs=95.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCc--ccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS--VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~   77 (159)
                      |+++.++.+||+|||+++........  .......+|+.|+|||.+.+..++.++|+||+|++++++++ +.+||.....
T Consensus       159 il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~  238 (298)
T 3f66_A          159 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT  238 (298)
T ss_dssp             EEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT
T ss_pred             EEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH
Confidence            57889999999999999876432211  12233457788999999988888999999999999999999 4555544221


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhh
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD  154 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~  154 (159)
                      .  ............                 ..+...+..+.+++.+||+.||.+|||+.++++.|+++.+.+..+
T Consensus       239 ~--~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~  296 (298)
T 3f66_A          239 F--DITVYLLQGRRL-----------------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE  296 (298)
T ss_dssp             T--THHHHHHTTCCC-----------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCS
T ss_pred             H--HHHHHHhcCCCC-----------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccC
Confidence            1  111111111000                 001133457899999999999999999999999999999887654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.89  E-value=3.8e-24  Score=151.87  Aligned_cols=130  Identities=22%  Similarity=0.404  Sum_probs=95.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...... ........+++.|+|||++....++.++||||||++++++++ |..||...... 
T Consensus       315 ill~~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-  392 (454)
T 1qcf_A          315 ILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-  392 (454)
T ss_dssp             EEECTTCCEEECSTTGGGGBCCHH-HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred             EEECCCCcEEEeeCCCceEcCCCc-eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-
Confidence            578999999999999998764221 111223346778999999988889999999999999999998 99998653221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       .....+.....                 .+.+..++..+.+++.+||+.||.+|||+.+|+..|+++...
T Consensus       393 -~~~~~i~~~~~-----------------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          393 -EVIRALERGYR-----------------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             -HHHHHHHHTCC-----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             -HHHHHHHcCCC-----------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence             11111111100                 011224567899999999999999999999999999887654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.89  E-value=2.4e-23  Score=141.78  Aligned_cols=123  Identities=20%  Similarity=0.236  Sum_probs=89.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......||+.|+|||++.+..++.++|+||+|++++++++|..||.....  .
T Consensus       172 Ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~  247 (321)
T 2c30_A          172 ILLTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--V  247 (321)
T ss_dssp             EEECTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--H
T ss_pred             EEECCCCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--H
Confidence            5788899999999999987643221  22345789999999999888899999999999999999999999864321  1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....+........               ......+..+.+++.+||+.||.+|||+.++++
T Consensus       248 ~~~~~~~~~~~~~~---------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          248 QAMKRLRDSPPPKL---------------KNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             HHHHHHHHSSCCCC---------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHhcCCCCCc---------------CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            11111111111000               001134456889999999999999999999985

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.89  E-value=3.3e-23  Score=140.31  Aligned_cols=136  Identities=18%  Similarity=0.240  Sum_probs=87.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......|++.|+|||.+.+..++.++|+||+|++++++++|..||........
T Consensus       167 Il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~  244 (310)
T 2wqm_A          167 VFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY  244 (310)
T ss_dssp             EEECTTSCEEECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHH
T ss_pred             EEEcCCCCEEEEeccceeeecCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHH
Confidence            5788899999999999977643221  12234688999999999888889999999999999999999999865322211


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhh
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD  154 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~  154 (159)
                      .....+...   .....        .     ....+..+.+++.+||+.||.+|||+.++++.|+++....-+.
T Consensus       245 ~~~~~~~~~---~~~~~--------~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~  302 (310)
T 2wqm_A          245 SLCKKIEQC---DYPPL--------P-----SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS  302 (310)
T ss_dssp             HHHHHHHTT---CSCCC--------C-----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHhhcc---cCCCC--------c-----ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence            111111111   00000        0     0134557889999999999999999999999999998765543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.89  E-value=3.3e-23  Score=138.60  Aligned_cols=131  Identities=21%  Similarity=0.260  Sum_probs=92.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........ .......+++.|+|||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       144 il~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~  222 (281)
T 3cc6_A          144 ILVASPECVKLGDFGLSRYIEDEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD  222 (281)
T ss_dssp             EEEEETTEEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG
T ss_pred             EEECCCCcEEeCccCCCcccccccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH
Confidence            5778889999999999987643221 12233456788999999888888999999999999999998 999986432221


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                        ....+......                 +.+...+..+.+++.+||..||.+|||+.++++.|+++.+..
T Consensus       223 --~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  275 (281)
T 3cc6_A          223 --VIGVLEKGDRL-----------------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME  275 (281)
T ss_dssp             --HHHHHHHTCCC-----------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             --HHHHHhcCCCC-----------------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence              11111111000                 011134567889999999999999999999999999987753

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.89  E-value=3.8e-23  Score=138.62  Aligned_cols=126  Identities=24%  Similarity=0.373  Sum_probs=89.9

Q ss_pred             CccCCCCc-----eEEcccccceecCCCCCcccccccccccccccccccC--CCccccchhhHhHHHHHHHHHhcCCCCc
Q 035782            1 ILLDEDMV-----AHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS--EGIVSTKCDVYSYGVLLMETFTRKKPTD   73 (159)
Q Consensus         1 ili~~~~~-----~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~--~~~~~~~~dv~s~g~~~~~~~~~~~p~~   73 (159)
                      |+++.++.     +||+|||+++....     ......||+.|+|||++.  ...++.++|+||+|++++++++|..||.
T Consensus       155 il~~~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~  229 (287)
T 4f0f_A          155 IFLQSLDENAPVCAKVADFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD  229 (287)
T ss_dssp             EEESCCCTTCSCCEEECCCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             EEEeccCCCCceeEEeCCCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCc
Confidence            46666665     99999999975432     123356899999999884  4467889999999999999999999997


Q ss_pred             ccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           74 EMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                      .................           ...     ..+..++..+.+++.+||+.||.+|||+.++++.|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~-----------~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          230 EYSYGKIKFINMIREEG-----------LRP-----TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             TCCCCHHHHHHHHHHSC-----------CCC-----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             cccccHHHHHHHHhccC-----------CCC-----CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            54333222222211110           000     01124456789999999999999999999999999753

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.89  E-value=1.2e-23  Score=146.71  Aligned_cols=124  Identities=25%  Similarity=0.346  Sum_probs=81.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----------CccccchhhHhHHHHHHHHHhcC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----------GIVSTKCDVYSYGVLLMETFTRK   69 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----------~~~~~~~dv~s~g~~~~~~~~~~   69 (159)
                      ||++ ++.+||+|||+++.+............+||+.|+|||++.+           ..++.++||||+|++++++++|.
T Consensus       186 Ill~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~  264 (390)
T 2zmd_A          186 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK  264 (390)
T ss_dssp             EEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSS
T ss_pred             EEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCC
Confidence            4564 58899999999987654333223344679999999998754           35788999999999999999999


Q ss_pred             CCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           70 KPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        70 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .||..........    ..        ++++......     +...+..+.+++.+||+.||.+|||+.|+++
T Consensus       265 ~Pf~~~~~~~~~~----~~--------~~~~~~~~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          265 TPFQQIINQISKL----HA--------IIDPNHEIEF-----PDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             CTTTTCCCHHHHH----HH--------HHCTTSCCCC-----CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CcchhhhHHHHHH----HH--------HhCccccCCC-----CccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            9996532111111    11        1111000000     0112346889999999999999999999984

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.89  E-value=1.2e-23  Score=139.71  Aligned_cols=130  Identities=25%  Similarity=0.367  Sum_probs=93.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++......... ......+++.|+|||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       135 il~~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  213 (268)
T 3sxs_A          135 CLVDRDLCVKVSDFGMTRYVLDDQYV-SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE  213 (268)
T ss_dssp             EEECTTCCEEECCTTCEEECCTTCEE-ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             EEECCCCCEEEccCccceecchhhhh-cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH
Confidence            57889999999999999876433222 2233446778999999988889999999999999999998 999986532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                        ...........                 ..+...+..+.+++..||+.||.+|||+.++++.|+.+.++
T Consensus       214 --~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          214 --VVLKVSQGHRL-----------------YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             --HHHHHHTTCCC-----------------CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             --HHHHHHcCCCC-----------------CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence              11111100000                 00112345688999999999999999999999999988654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.88  E-value=1.9e-23  Score=152.91  Aligned_cols=135  Identities=23%  Similarity=0.362  Sum_probs=95.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||+++........ .......+++.|+|||++.+..++.++||||||++++++++ |..||......
T Consensus       467 ILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~  546 (613)
T 2ozo_A          467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP  546 (613)
T ss_dssp             EEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH
T ss_pred             EEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH
Confidence            57888999999999999876432221 11222345678999999988889999999999999999998 99998764321


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhh
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD  154 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~  154 (159)
                        .....+.....                 ...+..++..+.+++..||+.||.+||++.+|++.|+.+......+
T Consensus       547 --~~~~~i~~~~~-----------------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~  603 (613)
T 2ozo_A          547 --EVMAFIEQGKR-----------------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK  603 (613)
T ss_dssp             --HHHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCS
T ss_pred             --HHHHHHHcCCC-----------------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccc
Confidence              11111111100                 0112245678999999999999999999999999999988776544

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.88  E-value=2e-23  Score=142.98  Aligned_cols=119  Identities=24%  Similarity=0.402  Sum_probs=87.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||++.......   .....+||+.|+|||++.+..+ +.++|+||+|++++++++|..||.......
T Consensus       139 Ill~~~~~~kl~DFG~s~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~  215 (336)
T 3h4j_B          139 LLLDDNLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN  215 (336)
T ss_dssp             EEECTTCCEEECCSSCTBTTTTSB---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT
T ss_pred             EEEcCCCCEEEEEeccceeccCCc---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH
Confidence            578899999999999998764322   2234579999999999988765 678999999999999999999986532111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                                   ....+ .....      ..+...+..+.+++.+||..||.+|||+.|+++
T Consensus       216 -------------~~~~i-~~~~~------~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          216 -------------LFKKV-NSCVY------VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             -------------CBCCC-CSSCC------CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             -------------HHHHH-HcCCC------CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                         00110 00000      011234567889999999999999999999984

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.88  E-value=8.6e-24  Score=145.16  Aligned_cols=125  Identities=25%  Similarity=0.343  Sum_probs=79.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----------CccccchhhHhHHHHHHHHHhcC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----------GIVSTKCDVYSYGVLLMETFTRK   69 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----------~~~~~~~dv~s~g~~~~~~~~~~   69 (159)
                      ||++ ++.+||+|||+++.+.............||+.|+|||++.+           ..++.++||||+|++++++++|.
T Consensus       139 Ill~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~  217 (343)
T 3dbq_A          139 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK  217 (343)
T ss_dssp             EEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSS
T ss_pred             EEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCC
Confidence            4554 57899999999987654333333345679999999998754           56788999999999999999999


Q ss_pred             CCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           70 KPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        70 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      .||..............            ++.....     .+...+..+.+++.+||+.||.+|||+.++++.
T Consensus       218 ~pf~~~~~~~~~~~~~~------------~~~~~~~-----~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          218 TPFQQIINQISKLHAII------------DPNHEIE-----FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             CTTTTCCSHHHHHHHHH------------CTTSCCC-----CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CcchhhhhHHHHHHHHh------------cCCcccC-----CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            99965322111111111            1000000     011223468899999999999999999999853

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.88  E-value=3.4e-23  Score=141.50  Aligned_cols=129  Identities=17%  Similarity=0.235  Sum_probs=77.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc----------ccccccccccccccccc---CCCccccchhhHhHHHHHHHHHh
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV----------TQTMTMATIGYMAPEYG---SEGIVSTKCDVYSYGVLLMETFT   67 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~----------~~~~~~gt~~~~~pe~~---~~~~~~~~~dv~s~g~~~~~~~~   67 (159)
                      ||++.++.+||+|||++..........          ......||+.|+|||++   .+..++.++||||+|++++++++
T Consensus       169 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~  248 (337)
T 3ll6_A          169 LLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF  248 (337)
T ss_dssp             CEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHh
Confidence            688999999999999998764322211          11134589999999987   45578889999999999999999


Q ss_pred             cCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           68 RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        68 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                      |..||.......                 .+........     ....+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus       249 g~~p~~~~~~~~-----------------~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~  306 (337)
T 3ll6_A          249 RQHPFEDGAKLR-----------------IVNGKYSIPP-----HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI  306 (337)
T ss_dssp             SSCCC-----------------------------CCCCT-----TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCcchhHHH-----------------hhcCcccCCc-----ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            999986422110                 0000000000     011223477899999999999999999999999999


Q ss_pred             HHHh
Q 035782          148 KEKF  151 (159)
Q Consensus       148 ~~~~  151 (159)
                      ....
T Consensus       307 ~~~~  310 (337)
T 3ll6_A          307 AAAR  310 (337)
T ss_dssp             HHHT
T ss_pred             Hhcc
Confidence            8754

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=3.5e-23  Score=138.87  Aligned_cols=135  Identities=23%  Similarity=0.354  Sum_probs=98.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||++......... .......+++.|+|||++.+..++.++|+||+|++++++++ |..||......
T Consensus       141 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~  220 (287)
T 1u59_A          141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP  220 (287)
T ss_dssp             EEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH
T ss_pred             EEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence            57788899999999999876433221 11223346789999999888888999999999999999998 99998653321


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhh
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD  154 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~  154 (159)
                        .....+.....            .     ..+...+..+.+++..||..||.+||++.++++.|+++..+....
T Consensus       221 --~~~~~i~~~~~------------~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~  277 (287)
T 1u59_A          221 --EVMAFIEQGKR------------M-----ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK  277 (287)
T ss_dssp             --HHHHHHHTTCC------------C-----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred             --HHHHHHhcCCc------------C-----CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence              11111111100            0     011245567899999999999999999999999999998876543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.88  E-value=1.6e-23  Score=153.79  Aligned_cols=133  Identities=26%  Similarity=0.320  Sum_probs=94.2

Q ss_pred             CccCCCCceEEcccccceecCCCCC-cccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||+++.+..... ........+++.|+|||++.+..++.++||||||++++++++ |..||......
T Consensus       500 ILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~  579 (635)
T 4fl3_A          500 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS  579 (635)
T ss_dssp             EEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             EEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            5788899999999999987653322 122233456788999999988889999999999999999998 99998653321


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                        .....+......                 ..+..++..+.+++..||+.||.+|||+.+|++.|+++..++.
T Consensus       580 --~~~~~i~~~~~~-----------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l~  634 (635)
T 4fl3_A          580 --EVTAMLEKGERM-----------------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  634 (635)
T ss_dssp             --HHHHHHHTTCCC-----------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHC
T ss_pred             --HHHHHHHcCCCC-----------------CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhc
Confidence              111111111000                 0122456788999999999999999999999999999877653

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.88  E-value=2e-23  Score=139.67  Aligned_cols=130  Identities=19%  Similarity=0.329  Sum_probs=94.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...... ........+++.|+|||.+.+..++.++|+||+|++++++++ |..||...... 
T Consensus       151 ili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-  228 (283)
T 3gen_A          151 CLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-  228 (283)
T ss_dssp             EEECTTSCEEECSTTGGGGBCCHH-HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-
T ss_pred             EEEcCCCCEEEccccccccccccc-cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-
Confidence            578899999999999998764321 111222346778999999888888999999999999999998 99998653221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       .....+.....            ..     .+...+..+.+++.+||+.||.+|||+.++++.|+++.++
T Consensus       229 -~~~~~~~~~~~------------~~-----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          229 -ETAEHIAQGLR------------LY-----RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             -HHHHHHHTTCC------------CC-----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -HHHHHHhcccC------------CC-----CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence             11111111100            00     0112345788999999999999999999999999998865

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.88  E-value=8.6e-24  Score=140.66  Aligned_cols=120  Identities=24%  Similarity=0.372  Sum_probs=81.0

Q ss_pred             CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHH
Q 035782            6 DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDW   85 (159)
Q Consensus         6 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~   85 (159)
                      ++.+||+|||++.......    .....|++.|+|||.+.+..++.++|+||+|++++++++|..||.........    
T Consensus       152 ~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----  223 (271)
T 3dtc_A          152 NKILKITDFGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA----  223 (271)
T ss_dssp             SCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH----
T ss_pred             CcceEEccCCccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----
Confidence            6789999999998654322    12346899999999988888899999999999999999999998653211110    


Q ss_pred             HHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           86 VNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                       .........             ...+..++..+.+++.+||+.||.+|||+.++++.|+++
T Consensus       224 -~~~~~~~~~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          224 -YGVAMNKLA-------------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             -HHHHTSCCC-------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             -HhhhcCCCC-------------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence             000000000             001123456789999999999999999999999999764

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.88  E-value=1e-23  Score=142.29  Aligned_cols=143  Identities=16%  Similarity=0.299  Sum_probs=95.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++......... .......||..|+|||.+.+..++.++|+||+|++++++++|..|+...... 
T Consensus       157 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-  235 (302)
T 4e5w_A          157 VLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL-  235 (302)
T ss_dssp             EEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH-
T ss_pred             EEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH-
Confidence            57888899999999999887543322 2233355788899999998888899999999999999999998875432110 


Q ss_pred             ccHHHHHHhhcCC-cccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSG-ELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                        ........... ....+... +.. ......+...+..+.+++.+||+.||.+|||+.++++.|+++.
T Consensus       236 --~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          236 --FLKMIGPTHGQMTVTRLVNT-LKE-GKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             --HHHHHCSCCGGGHHHHHHHH-HHT-TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --HhhccCCcccccCHHHHHHH-Hhc-cCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence              00000000000 00000000 000 0011122345678999999999999999999999999999886

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.88  E-value=1.7e-23  Score=139.20  Aligned_cols=130  Identities=25%  Similarity=0.382  Sum_probs=93.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++....... ........+++.|+|||.+.+..++.++|+||+|++++++++ |..||...... 
T Consensus       137 il~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-  214 (269)
T 4hcu_A          137 CLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-  214 (269)
T ss_dssp             EEECGGGCEEECCTTGGGGBCCHH-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-
T ss_pred             EEEcCCCCEEeccccccccccccc-cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-
Confidence            577888999999999998653221 112233456778999999988889999999999999999999 89998653221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       .....+.....            .     ..+...+..+.+++.+||+.||.+|||+.++++.|+++.+.
T Consensus       215 -~~~~~~~~~~~------------~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          215 -EVVEDISTGFR------------L-----YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             -HHHHHHHTTCC------------C-----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             -HHHHHHhcCcc------------C-----CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence             11111111000            0     00112345688999999999999999999999999999864

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.88  E-value=2.8e-23  Score=144.09  Aligned_cols=133  Identities=26%  Similarity=0.417  Sum_probs=85.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||+++......... ......+++.|+|||++.+..++.++||||||++++++++ |..||......
T Consensus       178 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~  257 (373)
T 2qol_A          178 ILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ  257 (373)
T ss_dssp             EEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH
T ss_pred             EEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            578899999999999998764322211 1122235678999999988889999999999999999997 99998653211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                        .....+..            ....     +.+..++..+.+++..||+.||.+||++.++++.|+++.+...
T Consensus       258 --~~~~~i~~------------~~~~-----~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~  312 (373)
T 2qol_A          258 --DVIKAVDE------------GYRL-----PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG  312 (373)
T ss_dssp             --HHHHHHHT------------TEEC-----CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred             --HHHHHHHc------------CCCC-----CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence              11111110            0000     0112455678999999999999999999999999999987653

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.88  E-value=1.6e-23  Score=142.45  Aligned_cols=134  Identities=22%  Similarity=0.372  Sum_probs=96.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++...............+++.|+|||++.+..++.++|+||+|++++++++ |..||...... 
T Consensus       169 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-  247 (322)
T 1p4o_A          169 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-  247 (322)
T ss_dssp             EEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-
T ss_pred             EEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-
Confidence            5788999999999999986543322222333457889999999888888999999999999999999 88888653211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~  153 (159)
                       .....+..   ..        ...      .+...+..+.+++.+||+.||.+|||+.++++.|+++.+....
T Consensus       248 -~~~~~~~~---~~--------~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~  303 (322)
T 1p4o_A          248 -QVLRFVME---GG--------LLD------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFR  303 (322)
T ss_dssp             -HHHHHHHT---TC--------CCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHH
T ss_pred             -HHHHHHHc---CC--------cCC------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCc
Confidence             11111110   00        000      1123456788999999999999999999999999887654443

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.88  E-value=1.7e-23  Score=142.90  Aligned_cols=119  Identities=24%  Similarity=0.311  Sum_probs=87.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccc-cchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVS-TKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~-~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||++.......   .....+||+.|+|||++.+..+. .++|+||+|++++++++|..||...... 
T Consensus       145 Ill~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-  220 (328)
T 3fe3_A          145 LLLDADMNIKIADFGFSNEFTVGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK-  220 (328)
T ss_dssp             EEECTTSCEEECSTTCCGGGSSSC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH-
T ss_pred             EEEcCCCCEEEeeccCceecCCCC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH-
Confidence            578999999999999998764332   23446799999999998877664 7899999999999999999999653211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .....+...   .        . .      .+...+..+.+++.+||..||.+|||+.|+++
T Consensus       221 -~~~~~i~~~---~--------~-~------~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          221 -ELRERVLRG---K--------Y-R------IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             -HHHHHHHHC---C--------C-C------CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             -HHHHHHHhC---C--------C-C------CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence             111111110   0        0 0      01123456889999999999999999999975

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.88  E-value=8.2e-23  Score=145.33  Aligned_cols=137  Identities=18%  Similarity=0.143  Sum_probs=85.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++......   ..+..+||+.|+|||++.+..++.++|+||+||+++++++|..||.+....+ 
T Consensus       195 Ill~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-  270 (464)
T 3ttj_A          195 IVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-  270 (464)
T ss_dssp             EEECTTSCEEECCCCCC-----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-
T ss_pred             EEEeCCCCEEEEEEEeeeecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence            688999999999999998764322   2344679999999999998899999999999999999999999997532211 


Q ss_pred             cHHHHHHhhcCCcccc-------hhhhhcccc-----------------chhhhhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782           81 SLRDWVNKSLSGELTQ-------VIDANLARD-----------------EQSFFVKMDCLSSIMHLALDCCMESPDQRIY  136 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~-------~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  136 (159)
                      .+..... ........       .....+...                 +............+.+++.+||..||.+|||
T Consensus       271 ~~~~i~~-~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t  349 (464)
T 3ttj_A          271 QWNKVIE-QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS  349 (464)
T ss_dssp             HHHHHHH-HHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCC
T ss_pred             HHHHHHH-hcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCC
Confidence            0111111 00000000       000000000                 0000011123567899999999999999999


Q ss_pred             HHHHHH
Q 035782          137 MTDAAA  142 (159)
Q Consensus       137 ~~~ll~  142 (159)
                      +.|+++
T Consensus       350 a~e~L~  355 (464)
T 3ttj_A          350 VDDALQ  355 (464)
T ss_dssp             HHHHHT
T ss_pred             HHHHhc
Confidence            999984

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.88  E-value=1.5e-23  Score=142.96  Aligned_cols=146  Identities=23%  Similarity=0.379  Sum_probs=97.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++......... ......++..|+|||.+.+..++.++|+||+|++++++++|..|+.....  
T Consensus       176 Ili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~--  253 (326)
T 2w1i_A          176 ILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA--  253 (326)
T ss_dssp             EEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH--
T ss_pred             EEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH--
Confidence            578888999999999998875433221 12234467789999998888889999999999999999999888653210  


Q ss_pred             ccHHHHHHhhcCCcc--cchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGEL--TQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                       ..............  ..+. ..+... ...+.+..++..+.+++.+||+.||.+|||+.++++.|+++.+++
T Consensus       254 -~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l  324 (326)
T 2w1i_A          254 -EFMRMIGNDKQGQMIVFHLI-ELLKNN-GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM  324 (326)
T ss_dssp             -HHHHHHCTTCCTHHHHHHHH-HHHHTT-CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             -HHHHhhccccchhhhHHHHH-HHhhcC-CCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence             00000000000000  0000 000000 001112345678999999999999999999999999999998875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.88  E-value=6.5e-23  Score=137.81  Aligned_cols=136  Identities=25%  Similarity=0.318  Sum_probs=97.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||++.......... ......+++.|+|||.+.+..++.++|+||+|++++++++ |..||......
T Consensus       148 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~  227 (291)
T 1xbb_A          148 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS  227 (291)
T ss_dssp             EEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             EEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence            577888999999999998765433221 1222346788999999988888999999999999999998 99998653221


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhh
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDV  155 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~~  155 (159)
                        .....+......                 ..+...+..+.+++..||+.||.+|||+.++++.|+++....-...
T Consensus       228 --~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~  285 (291)
T 1xbb_A          228 --EVTAMLEKGERM-----------------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG  285 (291)
T ss_dssp             --HHHHHHHTTCCC-----------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHcCCCC-----------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcc
Confidence              111111111000                 0112445678999999999999999999999999999987765443

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.88  E-value=2.7e-23  Score=148.89  Aligned_cols=128  Identities=23%  Similarity=0.352  Sum_probs=94.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...... ........+++.|+|||++.+..++.++||||||++++++++ |..||...... 
T Consensus       349 Ill~~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-  426 (495)
T 1opk_A          349 CLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-  426 (495)
T ss_dssp             EEECGGGCEEECCTTCEECCTTCC-EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-
T ss_pred             EEECCCCcEEEeecccceeccCCc-eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-
Confidence            578889999999999998764322 222233446778999999988889999999999999999998 88998754321 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                       .....+...            ..     ...+..++..+.+++.+||+.||.+|||+.+|++.|+.+.
T Consensus       427 -~~~~~~~~~------------~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          427 -QVYELLEKD------------YR-----MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             -GHHHHHHTT------------CC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             -HHHHHHHcC------------CC-----CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence             111111111            00     0112245677899999999999999999999999998764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.88  E-value=6.3e-23  Score=137.01  Aligned_cols=128  Identities=27%  Similarity=0.397  Sum_probs=89.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++.......     ....+++.|+|||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus       148 il~~~~~~~~l~Dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~  222 (278)
T 1byg_A          148 VLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD  222 (278)
T ss_dssp             EEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG
T ss_pred             EEEeCCCcEEEeeccccccccccc-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            578889999999999987653221     12346788999999888888999999999999999998 999986532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                        ....+....            ..     ..+...+..+.+++.+||+.||.+|||+.++++.|+++...-.
T Consensus       223 --~~~~~~~~~------------~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~~  276 (278)
T 1byg_A          223 --VVPRVEKGY------------KM-----DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL  276 (278)
T ss_dssp             --HHHHHTTTC------------CC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred             --HHHHHhcCC------------CC-----CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhhc
Confidence              111111100            00     0112445678999999999999999999999999999987643

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.88  E-value=1.4e-22  Score=141.71  Aligned_cols=126  Identities=17%  Similarity=0.213  Sum_probs=84.0

Q ss_pred             CccCC---CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDE---DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.   ++.+||+|||+++......   .....+||+.|+|||++.+..++.++||||+|++++++++|..||.....
T Consensus       192 ill~~~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  268 (400)
T 1nxk_A          192 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG  268 (400)
T ss_dssp             EEESSSSTTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTT
T ss_pred             EEEecCCCCccEEEEecccccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcc
Confidence            46666   7899999999998764222   23346789999999999888999999999999999999999999975332


Q ss_pred             ccc--cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           78 GEM--SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        78 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      ...  .....+.....            ..+.  +.....+..+.+++.+||+.||.+|||+.++++.
T Consensus       269 ~~~~~~~~~~i~~~~~------------~~~~--~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          269 LAISPGMKTRIRMGQY------------EFPN--PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             CSSCCSHHHHHHHTCC------------CCCT--TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ccccHHHHHHHHcCcc------------cCCC--cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            111  11111111000            0000  0011345678999999999999999999999863

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.88  E-value=8.2e-23  Score=136.19  Aligned_cols=125  Identities=24%  Similarity=0.312  Sum_probs=89.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||.+..+.............|++.|+|||.+.+..+ +.++|+||+|++++++++|..||.......
T Consensus       136 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  215 (276)
T 2yex_A          136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC  215 (276)
T ss_dssp             EEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS
T ss_pred             EEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH
Confidence            5788899999999999987643322222344568999999999887664 778999999999999999999997643322


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....+......                 .......+..+.+++.+||+.||.+|||+.++++
T Consensus       216 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          216 QEYSDWKEKKTY-----------------LNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHHHHHHTTCTT-----------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHhhhcccc-----------------cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            222222111000                 0001134557889999999999999999999875

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.88  E-value=8.2e-23  Score=137.00  Aligned_cols=131  Identities=22%  Similarity=0.336  Sum_probs=96.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++....... ........+++.|+|||.+.+..++.++|+||+|++++++++ |..||...... 
T Consensus       142 il~~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-  219 (288)
T 3kfa_A          142 CLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-  219 (288)
T ss_dssp             EEECGGGCEEECCCCGGGTSCSSS-SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-
T ss_pred             EEEcCCCCEEEccCccceeccCCc-cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence            577888999999999998764332 222333456788999999888888999999999999999999 88898653221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                       ..........            ..     ..+...+..+.+++..||..||.+|||+.++++.|+++.++.
T Consensus       220 -~~~~~~~~~~------------~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~  273 (288)
T 3kfa_A          220 -QVYELLEKDY------------RM-----ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES  273 (288)
T ss_dssp             -GHHHHHHTTC------------CC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             -HHHHHHhccC------------CC-----CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence             1111111110            00     011234567899999999999999999999999999988764

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.88  E-value=5e-23  Score=138.80  Aligned_cols=122  Identities=25%  Similarity=0.267  Sum_probs=86.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc---cccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI---VSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.++.+||+|||+++.......  ......||+.|+|||.+.+..   ++.++|+||+|++++++++|..||.....
T Consensus       168 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~  245 (298)
T 2zv2_A          168 LLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI  245 (298)
T ss_dssp             EEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence            5788999999999999987643221  233457899999999987654   46789999999999999999999865321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  .....+....           .. .    +.....+..+.+++.+||+.||.+|||+.|+++
T Consensus       246 ~--~~~~~~~~~~-----------~~-~----~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          246 M--CLHSKIKSQA-----------LE-F----PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             H--HHHHHHHHCC-----------CC-C----CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             H--HHHHHHhccc-----------CC-C----CCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            1  1111111100           00 0    001134457889999999999999999999874

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.88  E-value=3.8e-23  Score=140.09  Aligned_cols=136  Identities=23%  Similarity=0.274  Sum_probs=84.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++....... ........|++.|+|||.+.+..++.++|+||+|++++++++|..||......  
T Consensus       165 Il~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--  241 (309)
T 2h34_A          165 ILVSADDFAYLVDFGIASATTDEK-LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--  241 (309)
T ss_dssp             EEECTTSCEEECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--
T ss_pred             EEEcCCCCEEEecCccCccccccc-cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--
Confidence            578889999999999997764322 11223356899999999998888899999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-cHHHHHHHHHHHHHHhhhh
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-YMTDAAAKLKKIKEKFLDD  154 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-t~~~ll~~l~~~~~~~~~~  154 (159)
                      .....+.....               .....+...+..+.+++.+||+.||.+|| +++++++.|+++.......
T Consensus       242 ~~~~~~~~~~~---------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~  301 (309)
T 2h34_A          242 VMGAHINQAIP---------------RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQD  301 (309)
T ss_dssp             HHHHHHHSCCC---------------CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-----
T ss_pred             HHHHHhccCCC---------------CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhccc
Confidence            11111111000               00011123455788999999999999999 8999999999876655443

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.88  E-value=2.8e-23  Score=147.32  Aligned_cols=131  Identities=28%  Similarity=0.434  Sum_probs=90.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...... ........+++.|+|||.+.+..++.++||||||++++++++ |..||.......
T Consensus       311 ill~~~~~~kl~DfG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~  389 (452)
T 1fmk_A          311 ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE  389 (452)
T ss_dssp             EEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             EEECCCCCEEECCCccceecCCCc-eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH
Confidence            578889999999999998764322 112223446788999999888889999999999999999999 899986532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                        ....+....                 ..+.+..++..+.+++.+||+.||++|||+.++++.|+++....
T Consensus       390 --~~~~i~~~~-----------------~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          390 --VLDQVERGY-----------------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             --HHHHHHTTC-----------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             --HHHHHHcCC-----------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence              111111100                 00112245678899999999999999999999999998876543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.88  E-value=2.3e-23  Score=139.80  Aligned_cols=134  Identities=22%  Similarity=0.322  Sum_probs=92.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||++.......... ......++..|+|||++.+..++.++|+||+|++++++++ |..||......
T Consensus       152 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~  231 (291)
T 1u46_A          152 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS  231 (291)
T ss_dssp             EEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             EEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH
Confidence            577888999999999998765433221 2223456778999999988888999999999999999999 99998653211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                        .....+..   ...             ..+.+...+..+.+++.+||..||.+|||+.++++.|+++...-.
T Consensus       232 --~~~~~~~~---~~~-------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  287 (291)
T 1u46_A          232 --QILHKIDK---EGE-------------RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM  287 (291)
T ss_dssp             --HHHHHHHT---SCC-------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred             --HHHHHHHc---cCC-------------CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence              11111110   000             000112445678999999999999999999999999998876543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.87  E-value=2.2e-22  Score=136.48  Aligned_cols=139  Identities=21%  Similarity=0.223  Sum_probs=89.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.......  ......||+.|+|||++.+ ..++.++|+||+|++++++++|..||......+
T Consensus       150 Il~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~  227 (311)
T 3niz_A          150 LLINSDGALKLADFGLARAFGIPVR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD  227 (311)
T ss_dssp             EEECTTCCEEECCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT
T ss_pred             EEECCCCCEEEccCcCceecCCCcc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH
Confidence            5788999999999999987643221  2333568999999998876 468899999999999999999999997643322


Q ss_pred             ccHHHHHHhh---cCCcccchhhh------hcc--ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKS---LSGELTQVIDA------NLA--RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~---~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      . ........   .+..+....+.      ...  ...............+.+++.+||+.||.+|||+.|+++
T Consensus       228 ~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          228 Q-LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             H-HHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             H-HHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            1 11111111   11111111000      000  000000111223457889999999999999999999985

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.87  E-value=7.4e-23  Score=138.54  Aligned_cols=138  Identities=20%  Similarity=0.203  Sum_probs=91.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++......   ......||+.|+|||++.+..++.++|+||+|++++++++|..||......+.
T Consensus       151 il~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~  227 (308)
T 3g33_A          151 ILVTSGGTVKLADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ  227 (308)
T ss_dssp             EEECTTSCEEECSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH
T ss_pred             EEEcCCCCEEEeeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            578899999999999998764322   22345689999999999888899999999999999999999999975332111


Q ss_pred             cHHHHHHhhc---CCcccchh---hhhcccc--chhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSL---SGELTQVI---DANLARD--EQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~---~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .........   ...+....   .......  .............+.+++.+||+.||.+|||+.|+++
T Consensus       228 -~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          228 -LGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             -HHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -HHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence             111111110   01111000   0000000  0000111234567899999999999999999999985

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.87  E-value=4.3e-22  Score=135.43  Aligned_cols=140  Identities=14%  Similarity=0.134  Sum_probs=92.7

Q ss_pred             CCCCceEEcccccceecCCCCCcccccccccccccccccccC--------CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            4 DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS--------EGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         4 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~--------~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      +.++.+||+|||+++.......   .....||+.|+|||++.        +..++.++|+||+|++++++++|..||...
T Consensus       150 ~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  226 (319)
T 4euu_A          150 DGQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF  226 (319)
T ss_dssp             TSCEEEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred             CCCceEEEccCCCceecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            6777899999999988754332   23356899999999865        457889999999999999999999999754


Q ss_pred             cccccc--HHHHHHhhcC-Ccccchh---hhhcc---ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           76 FIGEMS--LRDWVNKSLS-GELTQVI---DANLA---RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        76 ~~~~~~--~~~~~~~~~~-~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                      ......  ....+....+ ..+..+.   .....   ..+............+.+++.+||+.||.+|||+.|+++...+
T Consensus       227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d  306 (319)
T 4euu_A          227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD  306 (319)
T ss_dssp             TCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             CccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence            332211  1111111111 1111110   00000   0011112234667789999999999999999999999987764

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.87  E-value=1.4e-22  Score=136.25  Aligned_cols=140  Identities=16%  Similarity=0.133  Sum_probs=88.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc-cccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI-VSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.......  ......||+.|+|||++.+.. ++.++|+||+|++++++++|..||.......
T Consensus       132 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~  209 (292)
T 3o0g_A          132 LLINRNGELKLANFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  209 (292)
T ss_dssp             EEECTTSCEEECCCTTCEECCSCCS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHH
T ss_pred             EEEcCCCCEEEeecccceecCCccc--cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHH
Confidence            5788999999999999987643221  233456899999999987765 7999999999999999999888753322211


Q ss_pred             ccHHHHHHhhcC---Ccccchhh-hhccc------cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS---GELTQVID-ANLAR------DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~---~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ............   ..+..... +....      ..............+.+++.+||+.||.+|||+.|+++
T Consensus       210 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          210 DQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            112221111111   11111000 00000      00000111234567889999999999999999999985

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=1.7e-22  Score=138.27  Aligned_cols=133  Identities=28%  Similarity=0.436  Sum_probs=89.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||+++........ .......+++.|+|||.+.+..++.++|+||+|++++++++ |..||......
T Consensus       178 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~  257 (333)
T 1mqb_A          178 ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH  257 (333)
T ss_dssp             EEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             EEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH
Confidence            57889999999999999876432211 11222345778999999888888999999999999999998 99998653211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                        .....+.....                 .+.+..++..+.+++.+||+.||.+||++.++++.|+++.+...
T Consensus       258 --~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  312 (333)
T 1mqb_A          258 --EVMKAINDGFR-----------------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  312 (333)
T ss_dssp             --HHHHHHHTTCC-----------------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             --HHHHHHHCCCc-----------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence              11111111000                 00112345678999999999999999999999999999987654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.87  E-value=1.3e-22  Score=135.44  Aligned_cols=132  Identities=23%  Similarity=0.363  Sum_probs=95.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........ .......+++.|+|||.+.+..++.++|+||+|++++++++ |..||...... 
T Consensus       140 il~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-  217 (279)
T 1qpc_A          140 ILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-  217 (279)
T ss_dssp             EEECTTSCEEECCCTTCEECSSSCE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-
T ss_pred             EEEcCCCCEEECCCcccccccCccc-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-
Confidence            5788999999999999987653221 12223446778999999988888999999999999999998 88898653221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                       .....+.....            .     ..+...+..+.+++.+||..||.+|||+.++++.|+++.....
T Consensus       218 -~~~~~~~~~~~------------~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  272 (279)
T 1qpc_A          218 -EVIQNLERGYR------------M-----VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE  272 (279)
T ss_dssp             -HHHHHHHTTCC------------C-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             -HHHHHHhcccC------------C-----CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence             11111111000            0     0112345678999999999999999999999999999887654

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.87  E-value=2.5e-22  Score=142.05  Aligned_cols=124  Identities=17%  Similarity=0.151  Sum_probs=87.6

Q ss_pred             CccC---CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLD---EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++   .++.+||+|||++........  ......||+.|+|||++.+..++.++|+||+|++++++++|..||.....
T Consensus       141 Ill~~~~~~~~vkL~DFG~a~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~  218 (444)
T 3soa_A          141 LLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ  218 (444)
T ss_dssp             EEESBSSTTCCEEECCCSSCBCCCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             EEEeccCCCCcEEEccCceeEEecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH
Confidence            4565   467899999999987643222  22346799999999999888899999999999999999999999865321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ......+.......            +  .+.....+..+.+++.+||+.||.+|||+.|+++
T Consensus       219 --~~~~~~i~~~~~~~------------~--~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          219 --HRLYQQIKAGAYDF------------P--SPEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             --HHHHHHHHHTCCCC------------C--TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             --HHHHHHHHhCCCCC------------C--ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence              11111111110000            0  0001134567889999999999999999999985

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.87  E-value=5.7e-23  Score=136.35  Aligned_cols=130  Identities=25%  Similarity=0.382  Sum_probs=93.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++....... ........+++.|+|||++.+..++.++|+||+|++++++++ |..||...... 
T Consensus       135 ili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-  212 (267)
T 3t9t_A          135 CLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-  212 (267)
T ss_dssp             EEECGGGCEEECCTTGGGGBCCHH-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-
T ss_pred             EEECCCCCEEEccccccccccccc-ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-
Confidence            577888999999999998653211 111223456778999999888788999999999999999999 88998653211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       .....+.....            .     ..+...+..+.+++.+||+.||.+|||+.++++.|+++.++
T Consensus       213 -~~~~~i~~~~~------------~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          213 -EVVEDISTGFR------------L-----YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             -HHHHHHHTTCC------------C-----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             -HHHHHHhcCCc------------C-----CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence             11111111100            0     00112345788999999999999999999999999999864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.87  E-value=1.3e-22  Score=141.76  Aligned_cols=138  Identities=19%  Similarity=0.168  Sum_probs=89.7

Q ss_pred             CccC-CCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++ .++.+||+|||+++.......   .....||+.|+|||++.+. .++.++|+||+|++++++++|..||......
T Consensus       172 ill~~~~~~~kL~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~  248 (394)
T 4e7w_A          172 LLLDPPSGVLKLIDFGSAKILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI  248 (394)
T ss_dssp             EEEETTTTEEEECCCTTCEECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EEEcCCCCcEEEeeCCCcccccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            5677 789999999999987643322   2235689999999988665 5899999999999999999999999754221


Q ss_pred             cccHHHHHHhhcCCcccch----------hhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQV----------IDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      + .+.......-......+          .-+.....+.....+...+..+.+++.+||+.||.+|||+.|+++
T Consensus       249 ~-~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          249 D-QLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             H-HHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             H-HHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence            1 11111111000000000          000011111111112234568999999999999999999999985

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=1.3e-22  Score=138.17  Aligned_cols=123  Identities=18%  Similarity=0.221  Sum_probs=88.0

Q ss_pred             CccCC--CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDE--DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++.  ++.+||+|||+++.+....   ......||+.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus       133 Il~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  209 (321)
T 1tki_A          133 IIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ  209 (321)
T ss_dssp             EEESSSSCCCEEECCCTTCEECCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             EEEccCCCCCEEEEECCCCeECCCCC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH
Confidence            45665  7899999999998875332   223356899999999998888899999999999999999999998653211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        .....+....           ....   .......+..+.+++.+||..||.+|||+.|+++
T Consensus       210 --~~~~~i~~~~-----------~~~~---~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          210 --QIIENIMNAE-----------YTFD---EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             --HHHHHHHHTC-----------CCCC---HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --HHHHHHHcCC-----------CCCC---hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence              1111111100           0000   0011134567889999999999999999999986

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.87  E-value=2.3e-22  Score=137.77  Aligned_cols=120  Identities=20%  Similarity=0.231  Sum_probs=87.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+|+++++|++|..||......  
T Consensus       136 Ill~~~g~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--  211 (337)
T 1o6l_A          136 LMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--  211 (337)
T ss_dssp             EEECTTSCEEECCCTTCBCSCCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred             EEECCCCCEEEeeccchhhcccCC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--
Confidence            578999999999999997643222  1233467999999999999888999999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                      .....+...   .        +.       .+...+..+.+++.+||+.||.+||     ++.++++
T Consensus       212 ~~~~~i~~~---~--------~~-------~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          212 RLFELILME---E--------IR-------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHHHC---C--------CC-------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHHHcC---C--------CC-------CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            111111100   0        00       0113445788999999999999999     8998874

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.87  E-value=2.5e-22  Score=138.76  Aligned_cols=123  Identities=15%  Similarity=0.134  Sum_probs=87.1

Q ss_pred             CccCCCC----ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDM----VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~----~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      ||++.++    .+||+|||++........   ....+||+.|+|||++.+..++.++|+||+|++++++++|..||....
T Consensus       146 Ill~~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~  222 (361)
T 2yab_A          146 IMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT  222 (361)
T ss_dssp             EEESCTTSSSCCEEECCCSSCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred             EEEeCCCCCccCEEEEecCCceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence            4666665    799999999988654322   233569999999999988889999999999999999999999996532


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  ......+....   .        .. .  .......+..+.+++.+||..||.+|||+.|+++
T Consensus       223 ~--~~~~~~i~~~~---~--------~~-~--~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          223 K--QETLANITAVS---Y--------DF-D--EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             H--HHHHHHHHTTC---C--------CC-C--HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             H--HHHHHHHHhcC---C--------CC-C--chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1  11111111100   0        00 0  0011134557889999999999999999999984

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.87  E-value=8.6e-23  Score=141.81  Aligned_cols=122  Identities=11%  Similarity=0.162  Sum_probs=88.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-----------ccccchhhHhHHHHHHHHHhcC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-----------IVSTKCDVYSYGVLLMETFTRK   69 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-----------~~~~~~dv~s~g~~~~~~~~~~   69 (159)
                      ||++.++.+||+|||+++....     ......| +.|+|||++.+.           .++.++||||||++++++++|.
T Consensus       237 Ill~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~  310 (377)
T 3byv_A          237 IVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD  310 (377)
T ss_dssp             EEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred             EEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCC
Confidence            6889999999999999986421     2233567 899999998877           7899999999999999999999


Q ss_pred             CCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH--HHHHH
Q 035782           70 KPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA--KLKKI  147 (159)
Q Consensus        70 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~--~l~~~  147 (159)
                      .||.......             ....+..    .       ....+..+.+++.+||+.||.+|||+.++++  .++++
T Consensus       311 ~Pf~~~~~~~-------------~~~~~~~----~-------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          311 LPITKDAALG-------------GSEWIFR----S-------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             CCC------C-------------CSGGGGS----S-------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             CCCccccccc-------------chhhhhh----h-------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence            9986432110             0011110    0       0133457889999999999999999999994  66666


Q ss_pred             HHHhh
Q 035782          148 KEKFL  152 (159)
Q Consensus       148 ~~~~~  152 (159)
                      .+...
T Consensus       367 ~~~~~  371 (377)
T 3byv_A          367 RTELS  371 (377)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            65543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.87  E-value=2.4e-22  Score=138.70  Aligned_cols=66  Identities=23%  Similarity=0.247  Sum_probs=56.2

Q ss_pred             CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            5 EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         5 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      .++.+||+|||+++.....     .....||+.|+|||++.+..++.++|+||+|++++++++|..||...
T Consensus       197 ~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  262 (360)
T 3llt_A          197 KSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH  262 (360)
T ss_dssp             SCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence            3789999999999875322     22356899999999999889999999999999999999999999753

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.87  E-value=1.3e-22  Score=149.53  Aligned_cols=130  Identities=22%  Similarity=0.342  Sum_probs=92.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++........ ......+++.|+|||++.+..++.++|+||+|++++++++ |..||......+
T Consensus       522 ILl~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~  600 (656)
T 2j0j_A          522 VLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND  600 (656)
T ss_dssp             EEEEETTEEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             EEEeCCCCEEEEecCCCeecCCCcce-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence            57888999999999999876433221 2223456788999999888888999999999999999996 889987543211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                        ....+......                 ..+..++..+.+++.+||..||.+|||+.++++.|+++.++
T Consensus       601 --~~~~i~~~~~~-----------------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          601 --VIGRIENGERL-----------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             --HHHHHHHTCCC-----------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --HHHHHHcCCCC-----------------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence              11111111000                 01124556789999999999999999999999999999765

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.87  E-value=9.2e-23  Score=139.14  Aligned_cols=130  Identities=28%  Similarity=0.390  Sum_probs=92.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++....   ........+++.|+|||++.+..++.++|+||+|++++++++ |..||.......
T Consensus       173 Il~~~~~~~kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~  249 (327)
T 1fvr_A          173 ILVGENYVAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE  249 (327)
T ss_dssp             EEECGGGCEEECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             EEEcCCCeEEEcccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH
Confidence            5788889999999999875321   111222346788999999988888999999999999999998 999986532111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                        ....+...            ...     ..+...+..+.+++.+||..||.+|||+.++++.|+++.++..
T Consensus       250 --~~~~~~~~------------~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  303 (327)
T 1fvr_A          250 --LYEKLPQG------------YRL-----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  303 (327)
T ss_dssp             --HHHHGGGT------------CCC-----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             --HHHHhhcC------------CCC-----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence              11111100            000     0112345678999999999999999999999999999987653

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.87  E-value=1.6e-22  Score=137.12  Aligned_cols=117  Identities=20%  Similarity=0.199  Sum_probs=82.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++.......   ......||+.|+|||++.+ .++.++||||+|++++++++|..++....    
T Consensus       188 Ill~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----  259 (311)
T 3p1a_A          188 IFLGPRGRCKLGDFGLLVELGTAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----  259 (311)
T ss_dssp             EEECGGGCEEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----
T ss_pred             EEECCCCCEEEccceeeeecccCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----
Confidence            578899999999999998764322   2233568999999998876 68899999999999999999976653211    


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ......            ......     ..+...+..+.+++.+||+.||.+|||+.++++
T Consensus       260 ~~~~~~------------~~~~~~-----~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          260 GWQQLR------------QGYLPP-----EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHHHHT------------TTCCCH-----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHh------------ccCCCc-----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            011100            000000     011234567899999999999999999999985

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.87  E-value=3.1e-22  Score=136.58  Aligned_cols=123  Identities=16%  Similarity=0.164  Sum_probs=86.9

Q ss_pred             CccCCCC----ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDM----VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~----~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      ||++.++    .+||+|||+++.......   .....||+.|+|||++.+..++.++|+||+|++++++++|..||....
T Consensus       145 Ill~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  221 (326)
T 2y0a_A          145 IMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT  221 (326)
T ss_dssp             EEESCSSSSSCCEEECCCTTCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred             EEEecCCCCCCCEEEEECCCCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            4666666    799999999987643222   233568999999999988889999999999999999999999986432


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..  .....+..... ...             .......+..+.+++.+||..||.+|||+.++++
T Consensus       222 ~~--~~~~~~~~~~~-~~~-------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          222 KQ--ETLANVSAVNY-EFE-------------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HH--HHHHHHHHTCC-CCC-------------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HH--HHHHHHHhcCC-CcC-------------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            11  11111111000 000             0011133456889999999999999999999985

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.87  E-value=6.3e-22  Score=137.65  Aligned_cols=121  Identities=26%  Similarity=0.299  Sum_probs=85.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC---CccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE---GIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.+|.+||+|||++.......   .....+||+.|+|||++.+   ..++.++|+||+|+++|++++|..||.....
T Consensus       146 Ill~~~g~vkL~DFG~a~~~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~  222 (384)
T 4fr4_A          146 ILLDEHGHVHITDFNIAAMLPRET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS  222 (384)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT
T ss_pred             eEECCCCCEEEeccceeeeccCCC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC
Confidence            688999999999999998764322   2344679999999998864   3588999999999999999999999964322


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-HHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-MTDAA  141 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-~~~ll  141 (159)
                      ..  .........         .....      .+...+..+.+++.+||..||.+||+ +.+++
T Consensus       223 ~~--~~~~~~~~~---------~~~~~------~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~  270 (384)
T 4fr4_A          223 TS--SKEIVHTFE---------TTVVT------YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ  270 (384)
T ss_dssp             SC--HHHHHHHHH---------HCCCC------CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred             cc--HHHHHHHHh---------hcccC------CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence            11  111111000         00000      01134567899999999999999999 66655

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.87  E-value=1.2e-23  Score=143.45  Aligned_cols=148  Identities=24%  Similarity=0.286  Sum_probs=95.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++........ .......|++.|+|||++.+..++.++|+||+|++++++++|..||.......
T Consensus       158 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~  237 (327)
T 3lxl_A          158 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF  237 (327)
T ss_dssp             EEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH
T ss_pred             EEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh
Confidence            57888999999999999876533322 12233457888999999988888999999999999999999999976432110


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                      ..  .............+.......  .....+..++..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus       238 ~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  306 (327)
T 3lxl_A          238 LR--MMGCERDVPALSRLLELLEEG--QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR  306 (327)
T ss_dssp             HH--HCC----CCHHHHHHHHHHTT--CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred             hh--hcccccccccHHHHHHHhhcc--cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence            00  000000000001111100000  0011123456789999999999999999999999999998876543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.87  E-value=3.2e-22  Score=138.71  Aligned_cols=137  Identities=17%  Similarity=0.103  Sum_probs=81.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++......   ......||+.|+|||++.+..++.++|+||+|++++++++|..||......+ 
T Consensus       158 Il~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-  233 (371)
T 2xrw_A          158 IVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-  233 (371)
T ss_dssp             EEECTTSCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-
T ss_pred             EEEcCCCCEEEEEeeccccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence            578899999999999998754221   2233568999999999988889999999999999999999999997532211 


Q ss_pred             cHHHHHHhhcCCcccchh-------hhhccc-----------------cchhhhhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782           81 SLRDWVNKSLSGELTQVI-------DANLAR-----------------DEQSFFVKMDCLSSIMHLALDCCMESPDQRIY  136 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~-------~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  136 (159)
                      .+.. +............       ......                 .+............+.+++.+||..||.+|||
T Consensus       234 ~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t  312 (371)
T 2xrw_A          234 QWNK-VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS  312 (371)
T ss_dssp             HHHH-HHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCC
T ss_pred             HHHH-HHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCC
Confidence            0111 1000000000000       000000                 00000111234677999999999999999999


Q ss_pred             HHHHHH
Q 035782          137 MTDAAA  142 (159)
Q Consensus       137 ~~~ll~  142 (159)
                      +.|+++
T Consensus       313 ~~e~l~  318 (371)
T 2xrw_A          313 VDEALQ  318 (371)
T ss_dssp             HHHHHH
T ss_pred             HHHHhC
Confidence            999985

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.87  E-value=8.5e-23  Score=135.67  Aligned_cols=124  Identities=23%  Similarity=0.291  Sum_probs=88.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcccc---chhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVST---KCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~---~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++.++|+|||++.....       ....||+.|+|||.+.+..++.   ++|+||+|++++++++|..||.....
T Consensus       144 il~~~~~~~~l~~~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  216 (271)
T 3kmu_A          144 VMIDEDMTARISMADVKFSFQS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN  216 (271)
T ss_dssp             EEECTTSCEEEEGGGSCCTTSC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH
T ss_pred             EEEcCCcceeEEeccceeeecc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh
Confidence            5788899999999888754321       2245789999999987665443   79999999999999999999865322


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                      .... ........            ..     ..+...+..+.+++.+||+.||.+|||+.++++.|+++.+
T Consensus       217 ~~~~-~~~~~~~~------------~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          217 MEIG-MKVALEGL------------RP-----TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHH-HHHHHSCC------------CC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHH-HHHHhcCC------------CC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            1110 00000000            00     0112345678999999999999999999999999999865

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.87  E-value=6.8e-22  Score=137.54  Aligned_cols=70  Identities=26%  Similarity=0.262  Sum_probs=58.7

Q ss_pred             Ccc--CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILL--DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili--~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||+  +.++.+||+|||+++.....     .....||+.|+|||++.+..++.++|+||+|++++++++|..||...
T Consensus       190 Ill~~~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          190 ILLCNPKRSAIKIVDFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             EEESSTTSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             EEEecCCCCcEEEEeccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            466  45788999999999876432     22356899999999999888999999999999999999999999753

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.87  E-value=1.2e-22  Score=136.31  Aligned_cols=122  Identities=20%  Similarity=0.260  Sum_probs=77.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCccccccccccccccccccc----CCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYG----SEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~----~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      |+++.++.+||+|||++.......   ......||+.|+|||.+    .+..++.++|+||+|++++++++|..||....
T Consensus       141 il~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  217 (290)
T 3fme_A          141 VLINALGQVKMCDFGISGYLVDDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG  217 (290)
T ss_dssp             CEECTTCCEEBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS
T ss_pred             EEECCCCCEEEeecCCcccccccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC
Confidence            688899999999999998764322   22234689999999985    45568889999999999999999999986432


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...............            ..+     ....+..+.+++.+||+.||.+|||+.++++
T Consensus       218 ~~~~~~~~~~~~~~~------------~~~-----~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          218 TPFQQLKQVVEEPSP------------QLP-----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             CHHHHHHHHHHSCCC------------CCC-----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             chHHHHHHHhccCCC------------Ccc-----cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            211111111111100            000     1133457889999999999999999999986

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.87  E-value=4.1e-23  Score=139.09  Aligned_cols=134  Identities=21%  Similarity=0.343  Sum_probs=90.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||+++...... ........||+.|+|||.+.+..++.++|+||+|++++++++|..||........
T Consensus       142 il~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~  220 (294)
T 4eqm_A          142 ILIDSNKTLKIFDFGIAKALSETS-LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI  220 (294)
T ss_dssp             EEECTTSCEEECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH
T ss_pred             EEECCCCCEEEEeCCCcccccccc-ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            578899999999999997764322 1122335689999999999888889999999999999999999999965321111


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-cHHHHHHHHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-YMTDAAAKLKKIKEK  150 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-t~~~ll~~l~~~~~~  150 (159)
                           .............          .......+..+.+++.+||..||.+|| ++.++.+.|+++..+
T Consensus       221 -----~~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          221 -----AIKHIQDSVPNVT----------TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             -----HHHHHSSCCCCHH----------HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             -----HHHHhhccCCCcc----------hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence                 0011111111000          011123456789999999999999998 899999988876543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.87  E-value=2.2e-22  Score=137.16  Aligned_cols=138  Identities=18%  Similarity=0.152  Sum_probs=85.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++......  .......||+.|+|||++.+ ..++.++|+||+|++++++++|..||......+
T Consensus       131 Il~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  208 (324)
T 3mtl_A          131 LLINERGELKLADFGLARAKSIPT--KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE  208 (324)
T ss_dssp             EEECTTCCEEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             EEECCCCCEEEccCcccccccCCc--cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            578899999999999998653221  12233568999999998876 468899999999999999999999997643221


Q ss_pred             ccHHHHHHhhc----CCcccchhhhhc------c--ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSL----SGELTQVIDANL------A--RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~----~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ....+....    ...+........      .  ...............+.+++.+||+.||.+|||+.|+++
T Consensus       209 --~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          209 --QLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             --HHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             --HHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence              111111111    111111111000      0  000001112234567889999999999999999999985

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.87  E-value=1.3e-22  Score=142.46  Aligned_cols=120  Identities=12%  Similarity=0.137  Sum_probs=87.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCccccccccccccccccccc----------CCCccccchhhHhHHHHHHHHHhcCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYG----------SEGIVSTKCDVYSYGVLLMETFTRKK   70 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~----------~~~~~~~~~dv~s~g~~~~~~~~~~~   70 (159)
                      ||++.++.+||+|||+++.....     ....+| +.|+|||++          .+..++.++||||||++++++++|..
T Consensus       242 ILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~  315 (413)
T 3dzo_A          242 IVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL  315 (413)
T ss_dssp             EEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred             EEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence            68899999999999999875322     233567 899999988          55568889999999999999999999


Q ss_pred             CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH--HHHHH
Q 035782           71 PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK--LKKIK  148 (159)
Q Consensus        71 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~--l~~~~  148 (159)
                      ||.......                 .....+...       ...+..+.+++.+||+.||.+|||+.++++.  ++++.
T Consensus       316 Pf~~~~~~~-----------------~~~~~~~~~-------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~  371 (413)
T 3dzo_A          316 PNTDDAALG-----------------GSEWIFRSC-------KNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR  371 (413)
T ss_dssp             CCCTTGGGS-----------------CSGGGGSSC-------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             CCCCcchhh-----------------hHHHHHhhc-------ccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHHH
Confidence            986532111                 111111110       1234578999999999999999999888642  44444


Q ss_pred             HH
Q 035782          149 EK  150 (159)
Q Consensus       149 ~~  150 (159)
                      +.
T Consensus       372 ~~  373 (413)
T 3dzo_A          372 TE  373 (413)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.87  E-value=3.5e-22  Score=135.80  Aligned_cols=138  Identities=21%  Similarity=0.235  Sum_probs=88.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.......  ......||+.|+|||++.+. .++.++|+||+|++++++++|..||.......
T Consensus       139 Il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  216 (317)
T 2pmi_A          139 LLINKRGQLKLGDFGLARAFGIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE  216 (317)
T ss_dssp             EEECTTCCEEECCCSSCEETTSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             eEEcCCCCEEECcCccceecCCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            5788999999999999987643221  22335689999999998764 57899999999999999999999997543211


Q ss_pred             ccHHHHHHhhcC----Ccccchhh-----hhccc----cch---hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS----GELTQVID-----ANLAR----DEQ---SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~----~~~~~~~~-----~~~~~----~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ....+.....    ..+.....     +.+..    ...   ...........+.+++.+||+.||.+|||+.|+++
T Consensus       217 --~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          217 --QLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             --HHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             --HHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence              1111111110    00000000     00000    000   00001123457899999999999999999999874

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.87  E-value=1.2e-22  Score=138.52  Aligned_cols=132  Identities=23%  Similarity=0.361  Sum_probs=91.7

Q ss_pred             CccC---CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccc
Q 035782            1 ILLD---EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMF   76 (159)
Q Consensus         1 ili~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~   76 (159)
                      ||++   .++.+||+|||++................|++.|+|||.+.+..++.++|+||+|++++++++ |..||....
T Consensus       171 Ili~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~  250 (327)
T 2yfx_A          171 CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS  250 (327)
T ss_dssp             EEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             EEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC
Confidence            4666   345699999999976543332222333567889999999888888999999999999999998 888986532


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      ..  .....+.....            ..     .+..++..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus       251 ~~--~~~~~~~~~~~------------~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~  306 (327)
T 2yfx_A          251 NQ--EVLEFVTSGGR------------MD-----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  306 (327)
T ss_dssp             HH--HHHHHHHTTCC------------CC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             HH--HHHHHHhcCCC------------CC-----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence            11  11111111100            00     01234567889999999999999999999999999887654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.87  E-value=2.9e-22  Score=137.24  Aligned_cols=114  Identities=22%  Similarity=0.282  Sum_probs=86.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||++........   .....||+.|+|||++.+..+ +.++|+||+|++++++++|..||.....  
T Consensus       161 Ill~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--  235 (335)
T 3dls_A          161 IVIAEDFTIKLIDFGSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--  235 (335)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--
T ss_pred             EEEcCCCcEEEeecccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--
Confidence            5788999999999999987653322   233568999999999887766 7889999999999999999999864211  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                                       ........       +...+..+.+++.+||+.||.+|||+.++++.
T Consensus       236 -----------------~~~~~~~~-------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          236 -----------------TVEAAIHP-------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             -----------------GTTTCCCC-------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             -----------------HHhhccCC-------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                             00000000       11234568899999999999999999999863

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.87  E-value=2.9e-22  Score=141.29  Aligned_cols=70  Identities=26%  Similarity=0.195  Sum_probs=59.0

Q ss_pred             CccCCCCc--eEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMV--AHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||++.++.  +||+|||+++.....     ....+||+.|+|||++.+..++.++||||+|++++++++|..||...
T Consensus       231 ILl~~~~~~~vkL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          231 ILLKQQGRSGIKVIDFGSSCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             EEESSTTSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             eEEccCCCcceEEeecccceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence            57888877  999999999765322     22356899999999998888999999999999999999999998754

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.86  E-value=2.4e-22  Score=141.38  Aligned_cols=138  Identities=20%  Similarity=0.180  Sum_probs=88.5

Q ss_pred             CccCCC-CceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDED-MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++.+ +.+||+|||+++.+.....   ....+||+.|+|||++.+. .++.++||||+||++++|++|+.||......
T Consensus       187 ILl~~~~~~~kl~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~  263 (420)
T 1j1b_A          187 LLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV  263 (420)
T ss_dssp             EEEETTTTEEEECCCTTCEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EEEeCCCCeEEeccchhhhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence            567744 6789999999987643322   2235689999999988765 6899999999999999999999999753221


Q ss_pred             cccHHHHHHhhcCC----------cccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSG----------ELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      + .+...+...-..          .......+.+...+.....+...+..+.+++.+||..||.+|||+.|+++
T Consensus       264 ~-~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          264 D-QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             H-HHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             H-HHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            1 111111111000          00111001111111111111234567899999999999999999999984

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.86  E-value=4.8e-22  Score=137.43  Aligned_cols=123  Identities=19%  Similarity=0.178  Sum_probs=86.3

Q ss_pred             CccCCC---CceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDED---MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.+   +.+||+|||++.......   ......||+.|+|||++.+..++.++|+||+|+++|++++|..||.....
T Consensus       159 Ill~~~~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~  235 (362)
T 2bdw_A          159 LLLASKAKGAAVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ  235 (362)
T ss_dssp             EEESCSSTTCCEEECCCTTCBCCTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEEecCCCCCCEEEeecCcceEecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH
Confidence            456543   469999999998764322   22345799999999999888899999999999999999999999865321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ......+.......            +  .......+..+.+++.+||..||.+|||+.++++
T Consensus       236 --~~~~~~i~~~~~~~------------~--~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          236 --HRLYAQIKAGAYDY------------P--SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             --HHHHHHHHHTCCCC------------C--TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             --HHHHHHHHhCCCCC------------C--cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence              11111111110000            0  0001134567889999999999999999999884

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.86  E-value=3.1e-22  Score=142.16  Aligned_cols=68  Identities=25%  Similarity=0.356  Sum_probs=50.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-------------------------cccccccccccccccccc-CCCccccchh
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-------------------------VTQTMTMATIGYMAPEYG-SEGIVSTKCD   54 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-------------------------~~~~~~~gt~~~~~pe~~-~~~~~~~~~d   54 (159)
                      ||++.++.+||+|||+++........                         ...+..+||++|+|||++ ....++.++|
T Consensus       187 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~D  266 (458)
T 3rp9_A          187 CLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAID  266 (458)
T ss_dssp             EEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHH
T ss_pred             EEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhH
Confidence            68899999999999999876422111                         122345789999999975 4557899999


Q ss_pred             hHhHHHHHHHHHhc
Q 035782           55 VYSYGVLLMETFTR   68 (159)
Q Consensus        55 v~s~g~~~~~~~~~   68 (159)
                      |||+||++++|++|
T Consensus       267 iwSlG~il~elltg  280 (458)
T 3rp9_A          267 VWSIGCIFAELLNM  280 (458)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999983

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.86  E-value=2.7e-22  Score=138.04  Aligned_cols=124  Identities=20%  Similarity=0.220  Sum_probs=78.5

Q ss_pred             CccCC---CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDE---DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.   ++.+||+|||+++......   ......||+.|+|||++.+..++.++|+||+|++++++++|..||.....
T Consensus       179 Ill~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  255 (349)
T 2w4o_A          179 LLYATPAPDAPLKIADFGLSKIVEHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG  255 (349)
T ss_dssp             EEESSSSTTCCEEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC
T ss_pred             EEEecCCCCCCEEEccCccccccCccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc
Confidence            45654   8899999999998764322   22335689999999999888899999999999999999999999865322


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...........    .. ....          +.....+..+.+++.+||..||.+|||+.++++
T Consensus       256 ~~~~~~~i~~~----~~-~~~~----------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          256 DQFMFRRILNC----EY-YFIS----------PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             HHHHHHHHHTT----CC-CCCT----------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHhC----CC-ccCC----------chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            11111111110    00 0000          001134557889999999999999999999985

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.86  E-value=6.3e-22  Score=137.34  Aligned_cols=123  Identities=18%  Similarity=0.196  Sum_probs=87.5

Q ss_pred             Ccc--CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILL--DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili--~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||+  +.++.+||+|||+++.+.....   .....||+.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus       218 Ill~~~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~  294 (373)
T 2x4f_A          218 ILCVNRDAKQIKIIDFGLARRYKPREK---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA  294 (373)
T ss_dssp             EEEEETTTTEEEECCCSSCEECCTTCB---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             EEEecCCCCcEEEEeCCCceecCCccc---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            455  5678999999999988753322   22346899999999998888899999999999999999999998653211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      . ...........            ...   ......+..+.+++.+||..||.+|||+.|+++
T Consensus       295 ~-~~~~i~~~~~~------------~~~---~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          295 E-TLNNILACRWD------------LED---EEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             H-HHHHHHHTCCC------------SCS---GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             H-HHHHHHhccCC------------CCh---hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1 11111111000            000   001134567899999999999999999999985

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.86  E-value=2.8e-22  Score=134.60  Aligned_cols=139  Identities=20%  Similarity=0.163  Sum_probs=86.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++......  .......||+.|+|||++.+. .++.++|+||+|++++++++|..||......+
T Consensus       131 il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  208 (288)
T 1ob3_A          131 LLINREGELKIADFGLARAFGIPV--RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD  208 (288)
T ss_dssp             EEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             EEEcCCCCEEEeECccccccCccc--cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            578899999999999998764221  122335689999999988764 57899999999999999999999997543211


Q ss_pred             ccHHHHHHhhc---CCcccchh-----hhhcccc--chhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSL---SGELTQVI-----DANLARD--EQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~---~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      . .........   ...+....     ++.....  ..........+..+.+++.+||+.||++|||+.|+++
T Consensus       209 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          209 Q-LMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             H-HHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             H-HHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            1 111111100   01111100     0000000  0000011234567889999999999999999999875

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.86  E-value=2.1e-22  Score=136.59  Aligned_cols=124  Identities=25%  Similarity=0.334  Sum_probs=78.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----------CccccchhhHhHHHHHHHHHhcC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----------GIVSTKCDVYSYGVLLMETFTRK   69 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----------~~~~~~~dv~s~g~~~~~~~~~~   69 (159)
                      |+++ ++.+||+|||++................|++.|+|||.+.+           ..++.++|+||+|++++++++|.
T Consensus       158 Il~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~  236 (313)
T 3cek_A          158 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK  236 (313)
T ss_dssp             EEEE-TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSS
T ss_pred             EEEE-CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCC
Confidence            3554 48899999999987643332222334568999999998765           36788999999999999999999


Q ss_pred             CCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           70 KPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        70 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .||..............            ++......     +...+..+.+++.+||+.||.+|||+.++++
T Consensus       237 ~pf~~~~~~~~~~~~~~------------~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          237 TPFQQIINQISKLHAII------------DPNHEIEF-----PDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             CTTTTCCSHHHHHHHHH------------CTTSCCCC-----CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CchhhHHHHHHHHHHHH------------hcccccCC-----cccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            99865322111111111            11000000     0122456889999999999999999999985

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.86  E-value=2.7e-22  Score=136.21  Aligned_cols=133  Identities=22%  Similarity=0.209  Sum_probs=92.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-------cccccccccccccccccCCCc---cccchhhHhHHHHHHHHHhcCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-------TQTMTMATIGYMAPEYGSEGI---VSTKCDVYSYGVLLMETFTRKK   70 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~gt~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~~~~   70 (159)
                      |+++.++.+||+|||++..........       ......|++.|+|||.+.+..   ++.++|+||+|++++++++|..
T Consensus       165 Il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~  244 (317)
T 2buj_A          165 ILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG  244 (317)
T ss_dssp             EEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSC
T ss_pred             EEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCC
Confidence            578899999999999987653111100       012234689999999887543   6889999999999999999999


Q ss_pred             CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           71 PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        71 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      ||..................            .     .+.....+..+.+++.+||+.||.+|||+.++++.|+++...
T Consensus       245 p~~~~~~~~~~~~~~~~~~~------------~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  307 (317)
T 2buj_A          245 PYDMVFQKGDSVALAVQNQL------------S-----IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP  307 (317)
T ss_dssp             TTHHHHHTTSCHHHHHHCC-------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred             ChhhhhcccchhhHHhhccC------------C-----CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence            98653222111111111100            0     001123456789999999999999999999999999987643

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.86  E-value=1.3e-22  Score=135.66  Aligned_cols=126  Identities=20%  Similarity=0.230  Sum_probs=91.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........   .....|++.|+|||.+.+..++.++|+||+|++++++++|..|+....    
T Consensus       153 il~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----  225 (284)
T 2a19_B          153 IFLVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----  225 (284)
T ss_dssp             EEEEETTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----
T ss_pred             EEEcCCCCEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----
Confidence            5778889999999999987653322   223468999999999888888999999999999999999988754211    


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~  153 (159)
                         ......        ....+.         ...+..+.+++.+||+.||.+|||+.++++.|+.+.+....
T Consensus       226 ---~~~~~~--------~~~~~~---------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~  278 (284)
T 2a19_B          226 ---KFFTDL--------RDGIIS---------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK  278 (284)
T ss_dssp             ---HHHHHH--------HTTCCC---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred             ---HHHHHh--------hccccc---------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence               011100        000000         12334578899999999999999999999999998766543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.86  E-value=4.5e-22  Score=139.04  Aligned_cols=145  Identities=14%  Similarity=0.139  Sum_probs=96.4

Q ss_pred             CCCCceEEcccccceecCCCCCcccccccccccccccccccCC--------CccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            4 DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE--------GIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         4 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~--------~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      +.++.+||+|||+++......   ......||+.|+|||++.+        ..++.++|+||+|++++++++|..||...
T Consensus       150 ~~~~~~kL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~  226 (396)
T 4eut_A          150 DGQSVYKLTDFGAARELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF  226 (396)
T ss_dssp             TSCEEEEECCGGGCEECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred             CCceeEEEecCCCceEccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            667789999999998764322   2233568999999998754        46788999999999999999999999754


Q ss_pred             cccccc--HHHHHHhhcC-Ccccchh---hhhcc---ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           76 FIGEMS--LRDWVNKSLS-GELTQVI---DANLA---RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        76 ~~~~~~--~~~~~~~~~~-~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                      ......  ....+....+ ..+..+.   ...+.   ..+............+.+++.+||+.||.+||++.++++.+++
T Consensus       227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~  306 (396)
T 4eut_A          227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD  306 (396)
T ss_dssp             TCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             CcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence            322211  1111111111 1111110   00000   0011112234677789999999999999999999999999998


Q ss_pred             HHHHh
Q 035782          147 IKEKF  151 (159)
Q Consensus       147 ~~~~~  151 (159)
                      +.+..
T Consensus       307 il~~~  311 (396)
T 4eut_A          307 ILHRM  311 (396)
T ss_dssp             HHTCE
T ss_pred             Hhhce
Confidence            87754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.86  E-value=6.4e-22  Score=136.47  Aligned_cols=137  Identities=19%  Similarity=0.159  Sum_probs=88.2

Q ss_pred             CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++. ++.+||+|||+++.......   .....||+.|+|||++.+. .++.++|+||+|++++++++|..||......
T Consensus       162 Ill~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~  238 (360)
T 3e3p_A          162 VLVNEADGTLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA  238 (360)
T ss_dssp             EEEETTTTEEEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EEEeCCCCcEEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH
Confidence            56775 89999999999987643322   2235689999999988655 4899999999999999999999999753221


Q ss_pred             cccHHHHHHhhcCCcccchhhhh-----------ccccchh---hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDAN-----------LARDEQS---FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      . ........ ........+...           ....+..   ..........+.+++.+||+.||.+|||+.|+++
T Consensus       239 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          239 G-QLHEIVRV-LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             H-HHHHHHHH-HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             H-HHHHHHHH-cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            1 11111111 100000010000           0000000   0011124678999999999999999999999984

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.86  E-value=8.6e-22  Score=135.54  Aligned_cols=140  Identities=18%  Similarity=0.174  Sum_probs=89.0

Q ss_pred             CccCCCCceEEcccccceecCCCCC--cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD--SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.++.+||+|||+++.+.....  ........||+.|+|||++.+. .++.++|+||+|++++++++|..||.....
T Consensus       155 Il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  234 (351)
T 3mi9_A          155 VLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE  234 (351)
T ss_dssp             EEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             EEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh
Confidence            5788999999999999987642221  1223345689999999988764 578999999999999999999999875332


Q ss_pred             ccccHHHHHHhhc---C-Ccccchhhhhc-------cc---cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSL---S-GELTQVIDANL-------AR---DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~---~-~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..  ....+....   . ..+...-....       ..   ............+.+.+++.+||+.||.+|||+.|+++
T Consensus       235 ~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          235 QH--QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             HH--HHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HH--HHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            11  111111111   1 11111100000       00   00000000112356889999999999999999999985

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.86  E-value=8.4e-22  Score=135.70  Aligned_cols=123  Identities=21%  Similarity=0.208  Sum_probs=86.4

Q ss_pred             CccCCCC---ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDM---VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.++   .+||+|||++........  ......||+.|+|||++.+..++.++|+||+|++++++++|..||.....
T Consensus       161 Il~~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  238 (351)
T 3c0i_A          161 VLLASKENSAPVKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE  238 (351)
T ss_dssp             EEECSSSTTCCEEECCCTTCEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH
T ss_pred             eEEecCCCCCcEEEecCcceeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH
Confidence            4565444   499999999988753221  23345799999999999888899999999999999999999999865311


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                         .....+...           .....+   ......+..+.+++.+||+.||.+|||+.++++
T Consensus       239 ---~~~~~i~~~-----------~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          239 ---RLFEGIIKG-----------KYKMNP---RQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             ---HHHHHHHHT-----------CCCCCH---HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ---HHHHHHHcC-----------CCCCCc---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence               111111110           000000   001134567889999999999999999999984

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.86  E-value=9.4e-22  Score=137.23  Aligned_cols=121  Identities=18%  Similarity=0.245  Sum_probs=84.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+|+++++|++|..||......+.
T Consensus       184 ILl~~~g~ikL~DFGla~~~~~~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~  261 (396)
T 4dc2_A          184 VLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN  261 (396)
T ss_dssp             EEECTTSCEEECCCTTCBCCCCTT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC---
T ss_pred             EEECCCCCEEEeecceeeecccCC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccc
Confidence            688999999999999997632221  123446799999999999998999999999999999999999999964321110


Q ss_pred             c---HHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           81 S---LRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        81 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                      .   .......       .+....+       ..+......+.+++.+||+.||.+||++
T Consensus       262 ~~~~~~~~~~~-------~i~~~~~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          262 PDQNTEDYLFQ-------VILEKQI-------RIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             ---CCHHHHHH-------HHHHCCC-------CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             cchhhHHHHHH-------HHhcccc-------CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            0   0000000       0000000       0112345578899999999999999995

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.86  E-value=9e-23  Score=147.38  Aligned_cols=130  Identities=28%  Similarity=0.435  Sum_probs=93.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...... ........++..|+|||++.+..++.++||||||++++++++ |..||...... 
T Consensus       394 Ill~~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-  471 (535)
T 2h8h_A          394 ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-  471 (535)
T ss_dssp             EEECGGGCEEECCTTSTTTCCCHH-HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-
T ss_pred             EEEcCCCcEEEcccccceecCCCc-eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence            578889999999999998653211 111223346778999999888889999999999999999999 89998653221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       .....+.....                 ...+..++..+.+++.+||+.||++|||+.+|++.|+.+...
T Consensus       472 -~~~~~i~~~~~-----------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          472 -EVLDQVERGYR-----------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             -HHHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             -HHHHHHHcCCC-----------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence             11111111000                 011224566789999999999999999999999999887543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.86  E-value=1.7e-22  Score=139.01  Aligned_cols=118  Identities=25%  Similarity=0.262  Sum_probs=84.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.++.+||+|||+++.....      ....||+.|+|||++.   ...++.++|+||+|++++++++|..||.....
T Consensus       185 Ill~~~~~~kL~DfG~a~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~  258 (348)
T 1u5q_A          185 ILLSEPGLVKLGDFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA  258 (348)
T ss_dssp             EEEETTTEEEECCCTTCBSSSSB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             EEECCCCCEEEeeccCceecCCC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence            57889999999999999775321      2356899999999873   45788999999999999999999999864321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..  ....+.....   ..     .        .+...+..+.+++.+||+.||.+|||+.++++
T Consensus       259 ~~--~~~~~~~~~~---~~-----~--------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          259 MS--ALYHIAQNES---PA-----L--------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             HH--HHHHHHHSCC---CC-----C--------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HH--HHHHHHhcCC---CC-----C--------CCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            11  1111111000   00     0        01133456889999999999999999999884

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.86  E-value=4.9e-22  Score=134.61  Aligned_cols=138  Identities=19%  Similarity=0.175  Sum_probs=84.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........  ......||+.|+|||++.+ ..++.++|+||+|++++++++|..||......+
T Consensus       133 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  210 (311)
T 4agu_A          133 ILITKHSVIKLCDFGFARLLTGPSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD  210 (311)
T ss_dssp             EEECTTSCEEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             EEEcCCCCEEEeeCCCchhccCccc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            5788999999999999987643222  2234568999999998865 467899999999999999999999997543221


Q ss_pred             ccHHHHHHhhcCCccc---------chhhhh----ccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELT---------QVIDAN----LARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~---------~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  ...+.........         ......    ..............+..+.+++.+||+.||.+|||+.|+++
T Consensus       211 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          211 Q--LYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             H--HHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             H--HHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            1  1111111000000         000000    00000000111234567899999999999999999999983

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.86  E-value=1.8e-22  Score=142.96  Aligned_cols=120  Identities=20%  Similarity=0.217  Sum_probs=87.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       280 Ill~~~~~~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--  355 (446)
T 4ejn_A          280 LMLDKDGHIKITDFGLCKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--  355 (446)
T ss_dssp             EEECSSSCEEECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred             EEECCCCCEEEccCCCceeccCCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--
Confidence            688999999999999997643221  2234467999999999998888999999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                      .....+....           . .      .+...+..+.+++.+||+.||.+||     ++.|+++
T Consensus       356 ~~~~~i~~~~-----------~-~------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          356 KLFELILMEE-----------I-R------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHHHHHHCC-----------C-C------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHHHhCC-----------C-C------CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            1111111000           0 0      0113345788999999999999999     9999984

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.86  E-value=3.4e-22  Score=136.36  Aligned_cols=139  Identities=14%  Similarity=0.187  Sum_probs=87.8

Q ss_pred             CccCCCC-ceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDM-VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++.++ .+||+|||+++.......   .....|++.|+|||.+.+ ..++.++|+||+|++++++++|..||......
T Consensus       161 il~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~  237 (330)
T 3nsz_A          161 VMIDHEHRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  237 (330)
T ss_dssp             EEEETTTTEEEECCCTTCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             EEEcCCCCEEEEEeCCCceEcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch
Confidence            5677666 899999999987643332   233568899999998876 56889999999999999999999998532221


Q ss_pred             cccHH------------HHHHhhcC---Ccccchhhhhcccc---chhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHH
Q 035782           79 EMSLR------------DWVNKSLS---GELTQVIDANLARD---EQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDA  140 (159)
Q Consensus        79 ~~~~~------------~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~l  140 (159)
                      .....            .++.....   ......+.......   .............+.+++.+||+.||.+|||+.|+
T Consensus       238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~  317 (330)
T 3nsz_A          238 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA  317 (330)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             HHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence            11111            11111100   00000000000000   00001112346678999999999999999999999


Q ss_pred             HH
Q 035782          141 AA  142 (159)
Q Consensus       141 l~  142 (159)
                      ++
T Consensus       318 l~  319 (330)
T 3nsz_A          318 ME  319 (330)
T ss_dssp             HT
T ss_pred             hc
Confidence            85

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=7.5e-22  Score=136.68  Aligned_cols=135  Identities=17%  Similarity=0.133  Sum_probs=88.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.....     .+...+|++|+|||++.+ ..++.++|+||+||+++++++|..||......+
T Consensus       159 Ill~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  233 (367)
T 1cm8_A          159 LAVNEDCELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD  233 (367)
T ss_dssp             EEECTTCCEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             EEEcCCCCEEEEeeecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            57889999999999999876422     233568999999998776 578999999999999999999999997532211


Q ss_pred             ccHHHHHHhhcCCcccc------------hhhhhccccc-hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQ------------VIDANLARDE-QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ....+..........            .+........ .-..........+.+++.+||..||.+|||+.++++
T Consensus       234 --~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          234 --QLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             --HHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             --HHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence              111111111100000            0000000000 000111234567899999999999999999999986

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.86  E-value=5.4e-22  Score=138.09  Aligned_cols=145  Identities=19%  Similarity=0.157  Sum_probs=93.0

Q ss_pred             CccC-CCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++ .++.+||+|||+++.......   .....||+.|+|||.+.+. .++.++|+||+|++++++++|..||......
T Consensus       172 il~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  248 (383)
T 3eb0_A          172 LLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI  248 (383)
T ss_dssp             EEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChH
Confidence            4676 678999999999987643322   2235689999999987765 5899999999999999999999999753221


Q ss_pred             cccHHHHHHhhcCCcccchh----------hhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH--HHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVI----------DANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA--AKLKK  146 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll--~~l~~  146 (159)
                      + .....+..........+.          -+...........+...+..+.+++.+||+.||.+|||+.|++  ..+++
T Consensus       249 ~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          249 D-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             H-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             H-HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence            1 111111111111000000          0011111111112234556789999999999999999999998  34555


Q ss_pred             HHH
Q 035782          147 IKE  149 (159)
Q Consensus       147 ~~~  149 (159)
                      +..
T Consensus       328 ~~~  330 (383)
T 3eb0_A          328 LRN  330 (383)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            544

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.86  E-value=5.1e-22  Score=134.68  Aligned_cols=123  Identities=23%  Similarity=0.262  Sum_probs=88.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++.......  .......|++.|+|||.+.+..++.++|+||+|++++++++|..||....... 
T Consensus       156 il~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-  232 (314)
T 3com_A          156 ILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-  232 (314)
T ss_dssp             EEECTTCCEEECCCTTCEECBTTB--SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-
T ss_pred             EEECCCCCEEEeecccchhhhhhc--cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH-
Confidence            578889999999999998764321  12233568999999999988889999999999999999999999986532111 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ............               ...+...+..+.+++.+||..||.+|||+.++++
T Consensus       233 -~~~~~~~~~~~~---------------~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          233 -AIFMIPTNPPPT---------------FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             -HHHHHHHSCCCC---------------CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -HHHHHhcCCCcc---------------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence             000111100000               0011234567889999999999999999999985

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.86  E-value=3.1e-22  Score=138.61  Aligned_cols=135  Identities=19%  Similarity=0.145  Sum_probs=79.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.....     .+...||+.|+|||++.+ ..++.++|+||+||+++++++|..||...... 
T Consensus       163 Ill~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-  236 (367)
T 2fst_X          163 LAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-  236 (367)
T ss_dssp             EEECTTCCEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-
T ss_pred             EEECCCCCEEEeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence            57889999999999999875321     233568999999998876 57889999999999999999999999753221 


Q ss_pred             ccHHHHHHhhcCCcccc------------hhhhhccc-cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQ------------VIDANLAR-DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~------------~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .....+..........            .+...... ............+.+.+++.+||..||.+|||+.++++
T Consensus       237 -~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          237 -DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             -HHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -HHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence             1111111111110000            11000000 00000011233567899999999999999999999985

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.86  E-value=1.6e-21  Score=134.13  Aligned_cols=132  Identities=22%  Similarity=0.182  Sum_probs=87.1

Q ss_pred             CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHH
Q 035782            4 DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLR   83 (159)
Q Consensus         4 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~   83 (159)
                      +.++.+||+|||+++.....     .....||+.|+|||++.+..++.++|+||+|++++++++|..||.......  ..
T Consensus       176 ~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~  248 (355)
T 2eu9_A          176 VKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE--HL  248 (355)
T ss_dssp             ESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HH
T ss_pred             cCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HH
Confidence            46789999999999875322     223568999999999988889999999999999999999999997533211  11


Q ss_pred             HHHHhhcCCcccchh--------------------------hhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           84 DWVNKSLSGELTQVI--------------------------DANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        84 ~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                      ..+............                          ....................+.+++.+||+.||++|||+
T Consensus       249 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~  328 (355)
T 2eu9_A          249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITL  328 (355)
T ss_dssp             HHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCH
Confidence            111111100000000                          000000000111223456789999999999999999999


Q ss_pred             HHHHH
Q 035782          138 TDAAA  142 (159)
Q Consensus       138 ~~ll~  142 (159)
                      .|+++
T Consensus       329 ~e~l~  333 (355)
T 2eu9_A          329 AEALL  333 (355)
T ss_dssp             HHHTT
T ss_pred             HHHhc
Confidence            99983

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.86  E-value=1.9e-21  Score=132.82  Aligned_cols=130  Identities=19%  Similarity=0.160  Sum_probs=86.0

Q ss_pred             CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHH
Q 035782            6 DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDW   85 (159)
Q Consensus         6 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~   85 (159)
                      ++.+||+|||+++.....     .....||+.|+|||++.+..++.++|+||+|++++++++|..||.......  ....
T Consensus       173 ~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~~  245 (339)
T 1z57_A          173 NPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE--HLAM  245 (339)
T ss_dssp             CCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH--HHHH
T ss_pred             CCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH--HHHH
Confidence            668999999999875322     223568999999999988889999999999999999999999997532211  1111


Q ss_pred             HHhhcCCcccchh--------------------------hhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHH
Q 035782           86 VNKSLSGELTQVI--------------------------DANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTD  139 (159)
Q Consensus        86 ~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~  139 (159)
                      +..........++                          .................+..+.+++.+||+.||.+|||+.|
T Consensus       246 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  325 (339)
T 1z57_A          246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLRE  325 (339)
T ss_dssp             HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHH
Confidence            1111100000000                          00000000111122356778999999999999999999999


Q ss_pred             HHH
Q 035782          140 AAA  142 (159)
Q Consensus       140 ll~  142 (159)
                      +++
T Consensus       326 ll~  328 (339)
T 1z57_A          326 ALK  328 (339)
T ss_dssp             HTT
T ss_pred             Hhc
Confidence            984

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=6.9e-22  Score=135.86  Aligned_cols=139  Identities=21%  Similarity=0.193  Sum_probs=89.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.+.....  ......||+.|+|||++.+. .++.++|+||+|++++++++|..||......+
T Consensus       143 il~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~  220 (346)
T 1ua2_A          143 LLLDENGVLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD  220 (346)
T ss_dssp             EEECTTCCEEECCCGGGSTTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             EEEcCCCCEEEEecccceeccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH
Confidence            5788999999999999987643221  23345689999999988654 57889999999999999999999986532211


Q ss_pred             ccHHHHHHhhc---CCcccchh---hhhc-ccc--chhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSL---SGELTQVI---DANL-ARD--EQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~---~~~~~~~~---~~~~-~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .+........   ...+....   +... ...  ..........+..+.+++.+||..||.+|||+.|+++
T Consensus       221 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          221 -QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             -HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             -HHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence             1111111111   01111100   0000 000  0000111234567999999999999999999999985

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.86  E-value=7.4e-22  Score=137.51  Aligned_cols=123  Identities=18%  Similarity=0.162  Sum_probs=87.0

Q ss_pred             CccC--CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLD--EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~--~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++  .++.+||+|||+++.......   .....||+.|+|||++.+..++.++|+||+|++++++++|..||..... 
T Consensus       180 Ill~~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-  255 (387)
T 1kob_A          180 IMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-  255 (387)
T ss_dssp             EEESSTTCCCEEECCCTTCEECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-
T ss_pred             eEEecCCCCceEEEecccceecCCCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-
Confidence            4565  457899999999988643322   2234689999999999888899999999999999999999999865321 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ......+.......         ..     ......+..+.+++.+||..||.+|||+.++++
T Consensus       256 -~~~~~~i~~~~~~~---------~~-----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          256 -LETLQNVKRCDWEF---------DE-----DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             -HHHHHHHHHCCCCC---------CS-----STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             -HHHHHHHHhCCCCC---------Cc-----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence             11111111110000         00     001134567889999999999999999999985

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.86  E-value=2.4e-22  Score=137.29  Aligned_cols=139  Identities=20%  Similarity=0.187  Sum_probs=85.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++.......  ......|++.|+|||++.+. .++.++|+||+|++++++++|..||.......
T Consensus       155 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  232 (331)
T 4aaa_A          155 ILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID  232 (331)
T ss_dssp             EEECTTSCEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             EEEcCCCcEEEEeCCCceeecCCcc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence            5788999999999999977543221  22335689999999988775 67899999999999999999999987543221


Q ss_pred             ccHHHHHHhh--c----------CCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKS--L----------SGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~--~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .. .......  .          .........+.+.............+..+.+++.+||+.||.+|||+.|+++
T Consensus       233 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          233 QL-YHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HH-HHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HH-HHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            11 0000000  0          0000000001111111111112244678999999999999999999999984

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.86  E-value=7.8e-22  Score=137.51  Aligned_cols=130  Identities=14%  Similarity=0.087  Sum_probs=85.4

Q ss_pred             ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccccc----HH
Q 035782            8 VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMS----LR   83 (159)
Q Consensus         8 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~----~~   83 (159)
                      .+||+|||+++.....     .....||+.|+|||++.+..++.++||||+|++++++++|..||.........    ..
T Consensus       234 ~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~  308 (397)
T 1wak_A          234 KVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHI  308 (397)
T ss_dssp             CEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHH
T ss_pred             ceEecccccccccccc-----CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHH
Confidence            7999999999876422     23356899999999998888999999999999999999999999754322211    11


Q ss_pred             HHHHhhcCCcccchh----------hh--hccc----c--------chhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHH
Q 035782           84 DWVNKSLSGELTQVI----------DA--NLAR----D--------EQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTD  139 (159)
Q Consensus        84 ~~~~~~~~~~~~~~~----------~~--~~~~----~--------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~  139 (159)
                      ..+...........+          ..  .+..    .        ......+......+.+++.+||+.||.+|||+.|
T Consensus       309 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  388 (397)
T 1wak_A          309 ALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE  388 (397)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHH
T ss_pred             HHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHH
Confidence            111111000000000          00  0000    0        0001123456778999999999999999999999


Q ss_pred             HHH
Q 035782          140 AAA  142 (159)
Q Consensus       140 ll~  142 (159)
                      +++
T Consensus       389 ~l~  391 (397)
T 1wak_A          389 CLR  391 (397)
T ss_dssp             HHT
T ss_pred             Hhh
Confidence            985

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.86  E-value=6.2e-22  Score=136.94  Aligned_cols=140  Identities=19%  Similarity=0.162  Sum_probs=89.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||+++........ .......||+.|+|||++.+ ..++.++|+||+|++++++++|..||......
T Consensus       159 Il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  238 (364)
T 3qyz_A          159 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL  238 (364)
T ss_dssp             EEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG
T ss_pred             EEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH
Confidence            57889999999999999876432211 11234578999999997654 45889999999999999999999999754322


Q ss_pred             cccHHHHHHhhcCCcccchhh------------hhccc-cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVID------------ANLAR-DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      +  ....+...........+.            ..... ..............+.+++.+||+.||.+|||+.|+++
T Consensus       239 ~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          239 D--QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             G--HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             H--HHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1  111111111100000000            00000 00000111234567899999999999999999999985

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.86  E-value=8e-22  Score=132.39  Aligned_cols=120  Identities=20%  Similarity=0.312  Sum_probs=84.1

Q ss_pred             CccC-CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++ .++.+||+|||++......    ......|++.|+|||.+.+ .++.++|+||+|++++++++|..||.......
T Consensus       162 il~~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~  236 (290)
T 1t4h_A          162 IFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA  236 (290)
T ss_dssp             EEESSTTSCEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH
T ss_pred             EEEECCCCCEEEeeCCCccccccc----ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH
Confidence            4676 7889999999999764322    1223568999999998765 58899999999999999999999986532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                          .............             ..+...++.+.+++.+||+.||.+|||+.++++
T Consensus       237 ----~~~~~~~~~~~~~-------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          237 ----QIYRRVTSGVKPA-------------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ----HHHHHHTTTCCCG-------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----HHHHHHhccCCcc-------------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence                1111111100000             001123356889999999999999999999985

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.86  E-value=4.4e-22  Score=140.50  Aligned_cols=73  Identities=25%  Similarity=0.361  Sum_probs=53.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCc--------------------cccccccccccccccccc-CCCccccchhhHhHH
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS--------------------VTQTMTMATIGYMAPEYG-SEGIVSTKCDVYSYG   59 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~--------------------~~~~~~~gt~~~~~pe~~-~~~~~~~~~dv~s~g   59 (159)
                      ||++.++.+||+|||+++........                    ...+..+||++|+|||++ ....++.++|+||+|
T Consensus       160 ILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG  239 (432)
T 3n9x_A          160 CLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTG  239 (432)
T ss_dssp             EEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred             eEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHH
Confidence            68899999999999999876432211                    112456789999999985 555789999999999


Q ss_pred             HHHHHHHhcCCCCc
Q 035782           60 VLLMETFTRKKPTD   73 (159)
Q Consensus        60 ~~~~~~~~~~~p~~   73 (159)
                      |+++++++|..||.
T Consensus       240 ~il~ell~g~~p~~  253 (432)
T 3n9x_A          240 CIFAELLNMLQSHI  253 (432)
T ss_dssp             HHHHHHHTTCTTTC
T ss_pred             HHHHHHHhcccccc
Confidence            99999998655543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.86  E-value=8.8e-23  Score=140.65  Aligned_cols=120  Identities=21%  Similarity=0.216  Sum_probs=83.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+|+++++|++|..||......  
T Consensus       155 ILl~~~g~ikL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--  230 (353)
T 3txo_A          155 VLLDHEGHCKLADFGMCKEGICNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--  230 (353)
T ss_dssp             EEECTTSCEEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred             EEECCCCCEEEccccceeecccCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--
Confidence            688999999999999997643221  1233467999999999998888999999999999999999999999653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH------HHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM------TDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~------~~ll~  142 (159)
                      .....+...           ...       .+......+.+++.+||..||.+||++      .++++
T Consensus       231 ~~~~~i~~~-----------~~~-------~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          231 DLFEAILND-----------EVV-------YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             HHHHHHHHC-----------CCC-------CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             HHHHHHHcC-----------CCC-------CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            111111110           000       011234568889999999999999998      66663

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.86  E-value=1.1e-21  Score=134.69  Aligned_cols=126  Identities=21%  Similarity=0.171  Sum_probs=83.8

Q ss_pred             CccCCCC--ceEEcccccceecCCCC--CcccccccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDM--VAHVSDFGISKLLGDGD--DSVTQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~--~~kl~Dfg~~~~~~~~~--~~~~~~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      |+++.++  .+||+|||+++.+....  .........||+.|+|||.+.+  ..++.++|+||+|++++++++|..||..
T Consensus       199 Ill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  278 (345)
T 3hko_A          199 FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPG  278 (345)
T ss_dssp             EEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            4676555  89999999998753221  1112334568999999998865  5688999999999999999999999865


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...... .........            ..   ..+.....+..+.+++.+||+.||.+|||+.++++
T Consensus       279 ~~~~~~-~~~~~~~~~------------~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          279 VNDADT-ISQVLNKKL------------CF---ENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             SSHHHH-HHHHHHCCC------------CT---TSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             CChHHH-HHHHHhccc------------cc---CCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            332111 111111000            00   00011134567889999999999999999999986

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.86  E-value=8.5e-22  Score=133.00  Aligned_cols=122  Identities=20%  Similarity=0.290  Sum_probs=89.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++.......  .......|++.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       150 il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--  225 (303)
T 3a7i_A          150 VLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--  225 (303)
T ss_dssp             EEECTTSCEEECCCTTCEECBTTB--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--
T ss_pred             EEECCCCCEEEeecccceecCccc--cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--
Confidence            578899999999999998764322  1223456899999999998888899999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                      .....+.......                 .+...+..+.+++.+||+.||.+|||+.++++.
T Consensus       226 ~~~~~~~~~~~~~-----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          226 KVLFLIPKNNPPT-----------------LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHHHHHSCCCC-----------------CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             HHHHHhhcCCCCC-----------------CccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            1111111111000                 011334568899999999999999999999864

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.85  E-value=6.3e-22  Score=135.09  Aligned_cols=123  Identities=19%  Similarity=0.159  Sum_probs=84.3

Q ss_pred             CccCC---CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDE---DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.   ++.+||+|||+++.......   .....||+.|+|||++.+..++.++|+||+|++++++++|..||.....
T Consensus       162 Il~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  238 (327)
T 3lm5_A          162 ILLSSIYPLGDIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN  238 (327)
T ss_dssp             EEESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEEecCCCCCcEEEeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence            45665   78999999999987643221   2335689999999999888899999999999999999999999865322


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..  ....+.......              ........+..+.+++.+||+.||.+|||+.++++
T Consensus       239 ~~--~~~~i~~~~~~~--------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          239 QE--TYLNISQVNVDY--------------SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HH--HHHHHHHTCCCC--------------CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hH--HHHHHHhccccc--------------CchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            11  111111100000              00011234557889999999999999999999974

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.85  E-value=6.6e-22  Score=136.27  Aligned_cols=119  Identities=22%  Similarity=0.255  Sum_probs=86.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+|+++++|++|..||......  
T Consensus       152 Ill~~~g~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--  227 (353)
T 2i0e_A          152 VMLDSEGHIKIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--  227 (353)
T ss_dssp             EEECTTSCEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred             EEEcCCCcEEEEeCCcccccccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--
Confidence            688999999999999997643221  1233467999999999998888999999999999999999999999653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll  141 (159)
                      .....+..           ..+.       .+...+..+.+++.+||..||.+||+     +.+++
T Consensus       228 ~~~~~i~~-----------~~~~-------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~  275 (353)
T 2i0e_A          228 ELFQSIME-----------HNVA-------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK  275 (353)
T ss_dssp             HHHHHHHH-----------CCCC-------CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHH
T ss_pred             HHHHHHHh-----------CCCC-------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence            11111111           0000       01134567889999999999999995     56665

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.85  E-value=5.1e-22  Score=141.47  Aligned_cols=119  Identities=24%  Similarity=0.380  Sum_probs=87.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||++.......   .....+||+.|+|||++.+..+ +.++|+||+|++++++++|..||...... 
T Consensus       147 Ill~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-  222 (476)
T 2y94_A          147 VLLDAHMNAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-  222 (476)
T ss_dssp             EEECTTCCEEECCCSSCEECCTTC---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-
T ss_pred             EEEecCCCeEEEeccchhhccccc---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-
Confidence            578899999999999998864332   2234579999999999888765 67899999999999999999998653211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .....+....           . .      .+......+.+++.+||..||.+|||+.++++
T Consensus       223 -~~~~~i~~~~-----------~-~------~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          223 -TLFKKICDGI-----------F-Y------TPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             -HHHHHHHTTC-----------C-C------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -HHHHHHhcCC-----------c-C------CCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence             1111111100           0 0      01123456889999999999999999999985

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.85  E-value=1.8e-21  Score=132.50  Aligned_cols=123  Identities=15%  Similarity=0.158  Sum_probs=86.9

Q ss_pred             CccCCCC----ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDM----VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~----~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      |+++.++    .+||+|||++........   .....||+.|+|||++.+..++.++|+||+|++++++++|..||....
T Consensus       146 Il~~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  222 (321)
T 2a2a_A          146 IMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT  222 (321)
T ss_dssp             EEESCTTSSSCCEEECCCTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred             EEEecCCCCcCCEEEccCccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC
Confidence            4677776    799999999987653322   233568999999999988889999999999999999999999986532


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..  .....+..... ...           .  ......+..+.+++.+||..||.+|||+.++++
T Consensus       223 ~~--~~~~~i~~~~~-~~~-----------~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          223 KQ--ETLANITSVSY-DFD-----------E--EFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HH--HHHHHHHTTCC-CCC-----------H--HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             HH--HHHHHHHhccc-ccC-----------h--hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            11  11111110000 000           0  001133457889999999999999999999985

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.85  E-value=2.4e-22  Score=136.22  Aligned_cols=132  Identities=21%  Similarity=0.343  Sum_probs=82.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.+...... .......||+.|+|||++.+..++.++|+||+|++++++++|..||.......
T Consensus       147 il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~  226 (311)
T 3ork_A          147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS  226 (311)
T ss_dssp             EEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             EEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            57888999999999999876433221 12233568999999999988889999999999999999999999996532211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHH-HHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTD-AAAKLKKIK  148 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~-ll~~l~~~~  148 (159)
                      ... .....    .           ...........+..+.+++.+||+.||.+||++.+ +.+.+.++.
T Consensus       227 ~~~-~~~~~----~-----------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          227 VAY-QHVRE----D-----------PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             HHH-HHHHC----C-----------CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHH-HHhcC----C-----------CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence            110 00000    0           00000111234567889999999999999997555 445555554

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.85  E-value=1.7e-21  Score=130.41  Aligned_cols=123  Identities=19%  Similarity=0.177  Sum_probs=86.0

Q ss_pred             CccCCCC---ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDM---VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++   .+||+|||++........   .....|++.|+|||.+.+..++.++|+||+|++++++++|..||.....
T Consensus       136 il~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~  212 (284)
T 3kk8_A          136 LLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ  212 (284)
T ss_dssp             EEESSSSTTCCEEECCCTTCEECCSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEEecCCCCCcEEEeeceeeEEcccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch
Confidence            4565444   499999999987643222   2335689999999999888899999999999999999999999865321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  .....+.......              ..+.....+..+.+++.+||+.||.+|||+.|+++
T Consensus       213 ~--~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          213 H--RLYAQIKAGAYDY--------------PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             H--HHHHHHHHTCCCC--------------CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             h--HHHHHHHhccccC--------------CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            1  1111111110000              00001134457889999999999999999999985

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.85  E-value=1.5e-21  Score=135.03  Aligned_cols=123  Identities=24%  Similarity=0.259  Sum_probs=86.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC------CccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE------GIVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~------~~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      |+++.+|.+||+|||++........   .....||+.|+|||++.+      ..++.++|+||+|++++++++|..||..
T Consensus       231 Il~~~~~~ikl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~  307 (365)
T 2y7j_A          231 ILLDDNMQIRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH  307 (365)
T ss_dssp             EEECTTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EEECCCCCEEEEecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence            5788999999999999987653322   233578999999998753      2578899999999999999999999864


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...  ......+....           ...   ..+.....+..+.+++.+||+.||.+|||+.++++
T Consensus       308 ~~~--~~~~~~i~~~~-----------~~~---~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          308 RRQ--ILMLRMIMEGQ-----------YQF---SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             SSH--HHHHHHHHHTC-----------CCC---CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCH--HHHHHHHHhCC-----------CCC---CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            221  11111111100           000   00001133456889999999999999999999985

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.85  E-value=2.1e-22  Score=138.37  Aligned_cols=119  Identities=24%  Similarity=0.249  Sum_probs=86.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+++.......  .....+||+.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       149 Ill~~~g~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--  224 (345)
T 1xjd_A          149 ILLDKDGHIKIADFGMCKENMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--  224 (345)
T ss_dssp             EEECTTSCEEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred             EEECCCCCEEEeEChhhhhcccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--
Confidence            6789999999999999976432221  233467999999999999888999999999999999999999999653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH-HHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT-DAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~-~ll  141 (159)
                      .....+.... .           .      .+......+.+++.+||..||.+||++. +++
T Consensus       225 ~~~~~i~~~~-~-----------~------~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          225 ELFHSIRMDN-P-----------F------YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HHHHHHHHCC-C-----------C------CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HHHHHHHhCC-C-----------C------CCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            1111111100 0           0      0112345788999999999999999987 554

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.85  E-value=9.1e-22  Score=138.96  Aligned_cols=123  Identities=21%  Similarity=0.325  Sum_probs=79.9

Q ss_pred             CCCceEEcccccceecCCCCCcc--cccccccccccccccccCC-------CccccchhhHhHHHHHHHHHh-cCCCCcc
Q 035782            5 EDMVAHVSDFGISKLLGDGDDSV--TQTMTMATIGYMAPEYGSE-------GIVSTKCDVYSYGVLLMETFT-RKKPTDE   74 (159)
Q Consensus         5 ~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~~~~pe~~~~-------~~~~~~~dv~s~g~~~~~~~~-~~~p~~~   74 (159)
                      .++.+||+|||+++.........  ......||+.|+|||++.+       ..++.++|+||+|++++++++ |..||..
T Consensus       163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~  242 (434)
T 2rio_A          163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD  242 (434)
T ss_dssp             CSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred             CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence            34589999999998875432211  1234579999999998865       467899999999999999998 8999864


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....   .........  ...     .     ........+..+.+++.+||+.||.+|||+.++++
T Consensus       243 ~~~~~---~~i~~~~~~--~~~-----~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          243 KYSRE---SNIIRGIFS--LDE-----M-----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             TTTHH---HHHHHTCCC--CCC-----C-----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             chhhH---HHHhcCCCC--ccc-----c-----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            32211   111111100  000     0     00112245678999999999999999999999984

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.85  E-value=5.2e-22  Score=132.64  Aligned_cols=119  Identities=21%  Similarity=0.226  Sum_probs=84.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++.......    .....|++.|+|||.+.+..++.++|+||+|++++++++|..||....... 
T Consensus       140 ili~~~~~~~l~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-  214 (279)
T 3fdn_A          140 LLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-  214 (279)
T ss_dssp             EEECTTSCEEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-
T ss_pred             EEEcCCCCEEEEeccccccCCccc----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH-
Confidence            578899999999999986543221    233468999999999988888999999999999999999999986432111 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                       ....+.... .           .      .+...+..+.+++.+||+.||.+|||+.|+++.
T Consensus       215 -~~~~~~~~~-~-----------~------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          215 -TYKRISRVE-F-----------T------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             -HHHHHHHTC-C-----------C------CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             -HHHHHHhCC-C-----------C------CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence             111111000 0           0      011234568899999999999999999999953

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.85  E-value=1.8e-21  Score=132.66  Aligned_cols=121  Identities=23%  Similarity=0.286  Sum_probs=84.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCc----------ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS----------VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKK   70 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~   70 (159)
                      ||++.++.+||+|||+++........          .......||+.|+|||++.+..++.++|+||+|++++++++|..
T Consensus       195 Ill~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~  274 (332)
T 3qd2_B          195 IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS  274 (332)
T ss_dssp             EEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCC
Confidence            57888999999999999887543211          12234569999999999988889999999999999999999876


Q ss_pred             CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           71 PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        71 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ++....       ............              .......+.+.+++.+||+.||.+|||+.|+++
T Consensus       275 ~~~~~~-------~~~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          275 TQMERV-------RIITDVRNLKFP--------------LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             CHHHHH-------HHHHHHHTTCCC--------------HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             ChhHHH-------HHHHHhhccCCC--------------cccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            632110       000000000000              011234556789999999999999999999985

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.85  E-value=5.5e-22  Score=132.41  Aligned_cols=120  Identities=18%  Similarity=0.296  Sum_probs=67.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......|++.|+|||.+.+..++.++|+||+|++++++++|..||........
T Consensus       143 ili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  220 (278)
T 3cok_A          143 LLLTRNMNIKIADFGLATQLKMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT  220 (278)
T ss_dssp             EEECTTCCEEECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--
T ss_pred             EEEcCCCCEEEEeecceeeccCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH
Confidence            5788999999999999987642221  12234689999999999888889999999999999999999999865321110


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                           .        ........       ..+...+..+.+++.+||+.||.+|||+.++++
T Consensus       221 -----~--------~~~~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          221 -----L--------NKVVLADY-------EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             ----------------CCSSCC-------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             -----H--------HHHhhccc-------CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence                 0        00000000       011234457889999999999999999999985

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.85  E-value=3.4e-22  Score=135.65  Aligned_cols=123  Identities=24%  Similarity=0.261  Sum_probs=78.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      |+++.++.+||+|||++.......   ......|++.|+|||++.     ...++.++|+||+|++++++++|..||...
T Consensus       156 il~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  232 (318)
T 2dyl_A          156 ILLDERGQIKLCDFGISGRLVDDK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC  232 (318)
T ss_dssp             EEECTTSCEEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             EEECCCCCEEEEECCCchhccCCc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCC
Confidence            578899999999999997664322   123346899999999874     446788999999999999999999998653


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ............ ....               ..+.....+..+.+++.+||+.||.+|||+.++++
T Consensus       233 ~~~~~~~~~~~~-~~~~---------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          233 KTDFEVLTKVLQ-EEPP---------------LLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             CSHHHHHHHHHH-SCCC---------------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CccHHHHHHHhc-cCCC---------------CCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            221111111111 0000               00001124457889999999999999999999985

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.85  E-value=5.8e-22  Score=138.15  Aligned_cols=141  Identities=18%  Similarity=0.203  Sum_probs=85.6

Q ss_pred             CccCCCCceEEcccccceecCCCCC-----cccccccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCCc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD-----SVTQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPTD   73 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~~   73 (159)
                      ||++.++.+||+|||.+........     ........||+.|+|||++.+  ..++.++|+||+|++++++++|..||.
T Consensus       159 Ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  238 (389)
T 3gni_B          159 ILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK  238 (389)
T ss_dssp             EEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             EEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence            6788999999999999865422111     111122468899999999877  578999999999999999999999997


Q ss_pred             ccccccccHHHHHHhhcCC-----------------------cccchhhh----hccccchhhhhchHHHHHHHHHHhhh
Q 035782           74 EMFIGEMSLRDWVNKSLSG-----------------------ELTQVIDA----NLARDEQSFFVKMDCLSSIMHLALDC  126 (159)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~c  126 (159)
                      .......... ........                       .....+..    .........+.+......+.+++.+|
T Consensus       239 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~  317 (389)
T 3gni_B          239 DMPATQMLLE-KLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQC  317 (389)
T ss_dssp             TCCSTTHHHH-C--------------------------------------------------------CCHHHHHHHHHH
T ss_pred             CCCHHHHHHH-HhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHH
Confidence            5332211100 00000000                       00000000    00000001112233456799999999


Q ss_pred             cCCCCCCCCcHHHHHH
Q 035782          127 CMESPDQRIYMTDAAA  142 (159)
Q Consensus       127 l~~~p~~Rpt~~~ll~  142 (159)
                      |+.||.+|||+.|+++
T Consensus       318 L~~dP~~Rpta~ell~  333 (389)
T 3gni_B          318 LQRNPDARPSASTLLN  333 (389)
T ss_dssp             TCSCTTTSCCHHHHTT
T ss_pred             hhcCcccCCCHHHHhc
Confidence            9999999999999984

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.85  E-value=2.5e-22  Score=136.39  Aligned_cols=132  Identities=17%  Similarity=0.215  Sum_probs=84.0

Q ss_pred             CccCCCCceEEcccccceecCCCC---CcccccccccccccccccccCC---------CccccchhhHhHHHHHHHHHhc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGD---DSVTQTMTMATIGYMAPEYGSE---------GIVSTKCDVYSYGVLLMETFTR   68 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~gt~~~~~pe~~~~---------~~~~~~~dv~s~g~~~~~~~~~   68 (159)
                      |+++ ++.+||+|||+++......   .........|++.|+|||.+.+         ..++.++|+||+|++++++++|
T Consensus       161 Il~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g  239 (319)
T 2y4i_B          161 VFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR  239 (319)
T ss_dssp             EEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHS
T ss_pred             EEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhC
Confidence            4565 6789999999987643211   1112233458899999998764         3478899999999999999999


Q ss_pred             CCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           69 KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        69 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                      ..||.......  ...........   .     ..        ....+..+.+++.+||..||.+|||+.++++.|+++.
T Consensus       240 ~~p~~~~~~~~--~~~~~~~~~~~---~-----~~--------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~  301 (319)
T 2y4i_B          240 EWPFKTQPAEA--IIWQMGTGMKP---N-----LS--------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP  301 (319)
T ss_dssp             SCSSSSCCHHH--HHHHHHTTCCC---C-----CC--------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred             CCCCCCCCHHH--HHHHhccCCCC---C-----CC--------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            99986532211  11111111000   0     00        0123346889999999999999999999999999887


Q ss_pred             HHh
Q 035782          149 EKF  151 (159)
Q Consensus       149 ~~~  151 (159)
                      +..
T Consensus       302 ~~~  304 (319)
T 2y4i_B          302 KRN  304 (319)
T ss_dssp             ---
T ss_pred             Hhh
Confidence            654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.85  E-value=1.1e-21  Score=131.84  Aligned_cols=123  Identities=24%  Similarity=0.318  Sum_probs=84.0

Q ss_pred             CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++. ++.+||+|||++........  ......|++.|+|||++.+.  .++.++|+||+|++++++++|..||.....
T Consensus       153 il~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  230 (295)
T 2clq_A          153 VLINTYSGVLKISDFGTSKRLAGINP--CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE  230 (295)
T ss_dssp             EEEETTTCCEEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS
T ss_pred             EEEECCCCCEEEeecccccccCCCCC--cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc
Confidence            46666 88999999999987643221  12335689999999987654  378899999999999999999999865322


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .............            ...     .+...+..+.+++.+||+.||.+|||+.++++
T Consensus       231 ~~~~~~~~~~~~~------------~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          231 PQAAMFKVGMFKV------------HPE-----IPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHHHHHHHHHHCC------------CCC-----CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             hhHHHHhhccccc------------ccc-----ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1111100000000            000     11234567889999999999999999999974

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.85  E-value=1.7e-22  Score=137.80  Aligned_cols=125  Identities=26%  Similarity=0.290  Sum_probs=68.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCccccccccccccccccccc----CCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYG----SEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~----~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      |+++.++.+||+|||+++......   ......|++.|+|||++    .+..++.++|+||+|++++++++|..||....
T Consensus       157 Ill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  233 (327)
T 3aln_A          157 ILLDRSGNIKLCDFGISGQLVDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN  233 (327)
T ss_dssp             EEEETTTEEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-
T ss_pred             EEEcCCCCEEEccCCCceeccccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence            578899999999999997764322   12234689999999998    45568899999999999999999999986432


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..    .............     .+...     .....+..+.+++.+||+.||.+|||+.++++
T Consensus       234 ~~----~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          234 SV----FDQLTQVVKGDPP-----QLSNS-----EEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             ----------CCCCCSCCC-----CCCCC-----SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             hH----HHHHHHHhcCCCC-----CCCCc-----ccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            10    0001000000000     00000     01134567899999999999999999999985

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.85  E-value=2.8e-21  Score=135.97  Aligned_cols=124  Identities=24%  Similarity=0.313  Sum_probs=79.5

Q ss_pred             CccCC---CCceEEcccccceecCCCCCcccccccccccccccccccCC---CccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDE---DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE---GIVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      ||++.   ++.+||+|||+++......   .....+||+.|+|||++.+   ..++.++|+||+|++++++++|..||..
T Consensus       270 Ill~~~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~  346 (419)
T 3i6u_A          270 VLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE  346 (419)
T ss_dssp             EEESSSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EEEecCCCcceEEEeecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            45643   3469999999998764322   2234578999999998753   4678899999999999999999999975


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .... ......+........              .......+..+.+++.+||+.||.+|||+.++++
T Consensus       347 ~~~~-~~~~~~i~~~~~~~~--------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          347 HRTQ-VSLKDQITSGKYNFI--------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             CSSS-CCHHHHHHTTCCCCC--------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             Ccch-HHHHHHHhcCCCCCC--------------chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            3221 112111111110000              0011134567899999999999999999999985

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.85  E-value=1.3e-21  Score=132.08  Aligned_cols=122  Identities=20%  Similarity=0.206  Sum_probs=87.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc--cccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI--VSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~--~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||++................|++.|+|||++.+..  ++.++|+||+|++++++++|..||..... 
T Consensus       140 Il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-  218 (305)
T 2wtk_C          140 LLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-  218 (305)
T ss_dssp             EEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-
T ss_pred             EEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-
Confidence            578899999999999998764333322333456899999999887643  46789999999999999999999865321 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ......+....           .       ..+..++..+.+++.+||+.||.+|||+.++++
T Consensus       219 -~~~~~~i~~~~-----------~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          219 -YKLFENIGKGS-----------Y-------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             -HHHHHHHHHCC-----------C-------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             -HHHHHHHhcCC-----------C-------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             11111111100           0       011134567889999999999999999999985

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.85  E-value=4.3e-22  Score=132.96  Aligned_cols=123  Identities=18%  Similarity=0.222  Sum_probs=87.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||+++......  .......|++.|+|||.+.+..++.++|+||+|++++++++|..||......  
T Consensus       147 Il~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--  222 (279)
T 2w5a_A          147 VFLDGKQNVKLGDFGLARILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--  222 (279)
T ss_dssp             EEECSSSCEEECCCCHHHHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred             EEEcCCCCEEEecCchheeecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--
Confidence            578889999999999998764321  1122346889999999988888899999999999999999999998653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL  144 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l  144 (159)
                      .....+.....   .        .      .+...+..+.+++.+||+.||.+|||+.++++.+
T Consensus       223 ~~~~~i~~~~~---~--------~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          223 ELAGKIREGKF---R--------R------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             HHHHHHHHTCC---C--------C------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             HHHHHHhhccc---c--------c------CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            11111111100   0        0      0113456788999999999999999999998754

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.85  E-value=2.1e-21  Score=133.34  Aligned_cols=135  Identities=21%  Similarity=0.207  Sum_probs=88.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-cccc-chhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVST-KCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~-~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      |+++.++.+||+|||.+......    ......|++.|+|||.+.+. .++. ++|+||+|++++++++|..||......
T Consensus       183 il~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  258 (348)
T 2pml_X          183 ILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL  258 (348)
T ss_dssp             EEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS
T ss_pred             EEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence            57889999999999999876432    23345689999999998877 6666 899999999999999999998753321


Q ss_pred             cccHHHHHHhhc---CCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSL---SGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ......+....   +........+....  .........+..+.+++.+||+.||.+|||+.++++
T Consensus       259 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          259 -VELFNNIRTKNIEYPLDRNHFLYPLTNK--KSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             -HHHHHHHTSCCCCCCCSSSSSTTTTCC----------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             -HHHHHHHhccCcCCccchhhhhcccccc--ccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             11111111110   00000000000000  000011234567899999999999999999999985

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.85  E-value=8.4e-22  Score=134.04  Aligned_cols=116  Identities=24%  Similarity=0.275  Sum_probs=86.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+++.....     ....+||+.|+|||++.+..++.++|+||+|++++++++|..||.....  .
T Consensus       137 Ill~~~g~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~  209 (318)
T 1fot_A          137 ILLDKNGHIKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--M  209 (318)
T ss_dssp             EEECTTSCEEECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--H
T ss_pred             EEEcCCCCEEEeecCcceecCCc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--H
Confidence            57899999999999999876422     2235689999999999888899999999999999999999999865321  1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll  141 (159)
                      .....+..           ..+.       .+......+.+++.+||..||.+||     ++++++
T Consensus       210 ~~~~~i~~-----------~~~~-------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~  257 (318)
T 1fot_A          210 KTYEKILN-----------AELR-------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVK  257 (318)
T ss_dssp             HHHHHHHH-----------CCCC-------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHH
T ss_pred             HHHHHHHh-----------CCCC-------CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHh
Confidence            11111110           0000       0112345788999999999999999     888887

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.85  E-value=3.8e-22  Score=138.35  Aligned_cols=116  Identities=22%  Similarity=0.246  Sum_probs=84.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+|+++++|++|..||......  
T Consensus       170 Ill~~~g~ikL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--  245 (373)
T 2r5t_A          170 ILLDSQGHIVLTDFGLCKENIEHN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--  245 (373)
T ss_dssp             EEECTTSCEEECCCCBCGGGBCCC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH--
T ss_pred             EEECCCCCEEEeeCccccccccCC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--
Confidence            688999999999999997643221  1233467999999999999888999999999999999999999999653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT  138 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  138 (159)
                         .....        ++...+.       .+...+..+.+++.+||+.||.+||++.
T Consensus       246 ---~~~~~--------i~~~~~~-------~~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          246 ---EMYDN--------ILNKPLQ-------LKPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             ---HHHHH--------HHHSCCC-------CCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             ---HHHHH--------HHhcccC-------CCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence               11111        0000000       0113345688999999999999999975

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.85  E-value=2.7e-21  Score=131.69  Aligned_cols=138  Identities=20%  Similarity=0.215  Sum_probs=90.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||+++.....   .......|++.|+|||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       151 ili~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-  226 (326)
T 1blx_A          151 ILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-  226 (326)
T ss_dssp             EEECTTCCEEECSCCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-
T ss_pred             eEEcCCCCEEEecCcccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-
Confidence            57889999999999999765321   12334568999999999988889999999999999999999999987533211 


Q ss_pred             cHHHHHHhhc-C--Ccccchh---hhhccc--cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSL-S--GELTQVI---DANLAR--DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~-~--~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .......... +  ..+....   ......  ...........+..+.+++.+||..||.+|||+.++++
T Consensus       227 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          227 QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             HHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            1111111100 0  0000000   000000  00000111235567889999999999999999999984

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.85  E-value=7.8e-22  Score=135.79  Aligned_cols=117  Identities=19%  Similarity=0.181  Sum_probs=86.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+++.....     ....+||+.|+|||++.+..++.++|+||+|++++++++|..||.....  .
T Consensus       172 Ill~~~g~~kL~DFg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~  244 (350)
T 1rdq_E          172 LLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--I  244 (350)
T ss_dssp             EEECTTSCEEECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--H
T ss_pred             EEECCCCCEEEcccccceeccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--H
Confidence            57899999999999999876432     1235699999999999888899999999999999999999999865321  1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll~  142 (159)
                      .....+...   .        + .      .+...+..+.+++.+||+.||.+||+     +.++++
T Consensus       245 ~~~~~i~~~---~--------~-~------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          245 QIYEKIVSG---K--------V-R------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHHHHC---C--------C-C------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHHHcC---C--------C-C------CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            111111110   0        0 0      01134557889999999999999998     787763

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.84  E-value=3.6e-21  Score=133.13  Aligned_cols=124  Identities=14%  Similarity=-0.033  Sum_probs=90.9

Q ss_pred             CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHH
Q 035782            6 DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDW   85 (159)
Q Consensus         6 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~   85 (159)
                      ++.+||+|||+++.+.........+..+||+.|+|||++.+..++.++|+||+|++++++++|..||.....+...    
T Consensus       219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----  294 (365)
T 3e7e_A          219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK----  294 (365)
T ss_dssp             CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE----
T ss_pred             cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee----
Confidence            7999999999998754333333445567999999999999988999999999999999999999998643221100    


Q ss_pred             HHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCC-CcHHHHHHHHHHHHHHhhh
Q 035782           86 VNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQR-IYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R-pt~~~ll~~l~~~~~~~~~  153 (159)
                                  +.......        .....+.+++..|++.+|.+| |++.++.+.|+++.++..+
T Consensus       295 ------------~~~~~~~~--------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~~  343 (365)
T 3e7e_A          295 ------------PEGLFRRL--------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYT  343 (365)
T ss_dssp             ------------ECSCCTTC--------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHTT
T ss_pred             ------------echhcccc--------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhhh
Confidence                        00001110        113456678999999999998 6688888888888776543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.84  E-value=7.3e-22  Score=138.32  Aligned_cols=72  Identities=18%  Similarity=0.222  Sum_probs=51.6

Q ss_pred             CCCCceEEcccccceecCCCCC-cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            4 DEDMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         4 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      +.++.+||+|||+++.+..... .......+||+.|+|||++.+. .++.++||||+||+++++++|..||...
T Consensus       166 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  239 (405)
T 3rgf_A          166 PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  239 (405)
T ss_dssp             TTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred             CCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence            6778999999999987643211 1223346789999999988774 5899999999999999999999999653

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.84  E-value=1.2e-21  Score=135.66  Aligned_cols=132  Identities=13%  Similarity=0.067  Sum_probs=83.9

Q ss_pred             CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc-----
Q 035782            5 EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE-----   79 (159)
Q Consensus         5 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~-----   79 (159)
                      ..+.+||+|||+++.....     .....||+.|+|||++.+..++.++|+||+|++++++++|..||.......     
T Consensus       173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  247 (373)
T 1q8y_A          173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD  247 (373)
T ss_dssp             TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred             CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence            4458999999999876422     223468999999999988889999999999999999999999997543211     


Q ss_pred             ccHHHHHHhhcCCcccchhhh------h---------c---cc------cchhhhhchHHHHHHHHHHhhhcCCCCCCCC
Q 035782           80 MSLRDWVNKSLSGELTQVIDA------N---------L---AR------DEQSFFVKMDCLSSIMHLALDCCMESPDQRI  135 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~------~---------~---~~------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  135 (159)
                      ......... ....-..+...      .         +   ..      .......+...+..+.+++.+||+.||.+||
T Consensus       248 ~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  326 (373)
T 1q8y_A          248 DHIAQIIEL-LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA  326 (373)
T ss_dssp             HHHHHHHHH-HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred             HHHHHHHHh-cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence            011111110 00000000000      0         0   00      0000112346778899999999999999999


Q ss_pred             cHHHHHH
Q 035782          136 YMTDAAA  142 (159)
Q Consensus       136 t~~~ll~  142 (159)
                      |+.|+++
T Consensus       327 t~~ell~  333 (373)
T 1q8y_A          327 DAGGLVN  333 (373)
T ss_dssp             CHHHHHT
T ss_pred             CHHHHhh
Confidence            9999985

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.84  E-value=1.3e-21  Score=144.55  Aligned_cols=119  Identities=18%  Similarity=0.228  Sum_probs=87.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+++.......  .....+||+.|+|||++.+..++.++|+||+|+++|+|++|..||......  
T Consensus       473 ILl~~~g~ikL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~--  548 (674)
T 3pfq_A          473 VMLDSEGHIKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--  548 (674)
T ss_dssp             EEECSSSCEEECCCTTCEECCCTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred             EEEcCCCcEEEeecceeeccccCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH--
Confidence            6889999999999999986432221  234467999999999999889999999999999999999999999753211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH-----HHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM-----TDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~-----~~ll  141 (159)
                         ..........        +       ..+......+.+++.+||+.||.+||++     .||+
T Consensus       549 ---~~~~~i~~~~--------~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~  596 (674)
T 3pfq_A          549 ---ELFQSIMEHN--------V-------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK  596 (674)
T ss_dssp             ---HHHHHHHSSC--------C-------CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred             ---HHHHHHHhCC--------C-------CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence               1111111100        0       0011345678999999999999999997     6665

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.84  E-value=8.2e-22  Score=132.14  Aligned_cols=118  Identities=21%  Similarity=0.260  Sum_probs=77.7

Q ss_pred             CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHH
Q 035782            4 DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLR   83 (159)
Q Consensus         4 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~   83 (159)
                      +.++.+||+|||++..+....   ......|++.|+|||.+.+ .++.++|+||+|++++++++|..||........  .
T Consensus       161 ~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~--~  234 (285)
T 3is5_A          161 SPHSPIKIIDFGLAELFKSDE---HSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV--Q  234 (285)
T ss_dssp             STTCCEEECCCCCCCC-------------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--H
T ss_pred             CCCCCEEEEeeecceecCCcc---cCcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH--H
Confidence            456789999999998764322   2233568999999998764 678899999999999999999999875322111  1


Q ss_pred             HHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           84 DWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ....... ...        ...      ....++.+.+++.+||+.||.+|||+.|+++
T Consensus       235 ~~~~~~~-~~~--------~~~------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          235 QKATYKE-PNY--------AVE------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHCC-CCC--------CC--------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             hhhccCC-ccc--------ccc------cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1110000 000        000      0012456789999999999999999999985

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.84  E-value=2.1e-21  Score=133.43  Aligned_cols=121  Identities=19%  Similarity=0.266  Sum_probs=83.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+++.......  .....+||+.|+|||++.+..++.++|+||+|+++++|++|..||........
T Consensus       141 Ill~~~g~~kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  218 (345)
T 3a8x_A          141 VLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN  218 (345)
T ss_dssp             EEECTTSCEEECCGGGCBCSCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC---
T ss_pred             EEECCCCCEEEEeccccccccCCCC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccc
Confidence            5789999999999999986432221  23346799999999999988899999999999999999999999964321110


Q ss_pred             c---HHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           81 S---LRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        81 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                      .   .......       .+.....       ..+...+..+.+++.+||+.||.+||++
T Consensus       219 ~~~~~~~~~~~-------~i~~~~~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          219 PDQNTEDYLFQ-------VILEKQI-------RIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             ----CHHHHHH-------HHHHCCC-------CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             cccccHHHHHH-------HHHcCCC-------CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            0   0000000       0000000       0112345678899999999999999995

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.84  E-value=4.5e-21  Score=129.54  Aligned_cols=122  Identities=22%  Similarity=0.242  Sum_probs=86.8

Q ss_pred             Ccc---CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILL---DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |++   +.++.+||+|||++......    ......|++.|+|||.+.+..++.++|+||+|++++++++|..||.....
T Consensus       137 Il~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  212 (304)
T 2jam_A          137 LLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE  212 (304)
T ss_dssp             CEESSSSTTCCEEBCSCSTTCCCCCB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             EEEecCCCCCCEEEccCCcceecCCC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH
Confidence            456   67889999999998764321    12234689999999999888899999999999999999999999865321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  .....+.......              ........+..+.+++.+||..||.+|||+.++++
T Consensus       213 ~--~~~~~i~~~~~~~--------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          213 S--KLFEKIKEGYYEF--------------ESPFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             H--HHHHHHHHCCCCC--------------CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             H--HHHHHHHcCCCCC--------------CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1  1111111110000              00011234567899999999999999999999985

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.84  E-value=2.5e-21  Score=134.23  Aligned_cols=135  Identities=18%  Similarity=0.118  Sum_probs=85.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.....     .....||+.|+|||++.+ ..++.++|+||+|++++++++|..||......+
T Consensus       175 Ill~~~~~~kL~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  249 (371)
T 4exu_A          175 LAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD  249 (371)
T ss_dssp             EEECTTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             eEECCCCCEEEEecCcccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            57889999999999999765322     233568999999998876 578899999999999999999999997532211


Q ss_pred             ccHHHHHHhhcCCcccch------------hhhhccc-cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQV------------IDANLAR-DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~------------~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      . ...... .........            +...... ..............+.+++.+||+.||.+|||+.|+++
T Consensus       250 ~-~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          250 Q-LTQILK-VTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             H-HHHHHH-HHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             H-HHHHHH-HhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            1 111111 000000000            0000000 00000111234578999999999999999999999984

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.84  E-value=6.7e-22  Score=136.66  Aligned_cols=125  Identities=25%  Similarity=0.257  Sum_probs=75.7

Q ss_pred             CccCCCCc--eEEcccccceecCCCCCcccccccccccccccccccCCCccccc-hhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMV--AHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTK-CDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~-~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.++.  +||+|||+++......   ......||+.|+|||++.+..+..+ +|+||+|++++++++|..||.....
T Consensus       147 ill~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  223 (361)
T 3uc3_A          147 TLLDGSPAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE  223 (361)
T ss_dssp             EEECSSSSCCEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----
T ss_pred             EEEcCCCCceEEEeecCccccccccC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc
Confidence            46766655  9999999997542211   1233568999999999877766544 8999999999999999999975432


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .. ..............             ..+.....+..+.+++.+||+.||.+|||+.|+++
T Consensus       224 ~~-~~~~~~~~~~~~~~-------------~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          224 PR-DYRKTIQRILSVKY-------------SIPDDIRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             CC-CHHHHHHHHHTTCC-------------CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HH-HHHHHHHHHhcCCC-------------CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            11 11111111111000             00001123457889999999999999999999985

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.84  E-value=1.2e-21  Score=133.76  Aligned_cols=120  Identities=21%  Similarity=0.198  Sum_probs=82.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++.......  ......||+.|+|||++.+..++.++|+||+|++++++++|..||......  
T Consensus       152 ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--  227 (327)
T 3a62_A          152 IMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--  227 (327)
T ss_dssp             EEECTTSCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--
T ss_pred             eEECCCCcEEEEeCCcccccccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH--
Confidence            5788999999999999976432221  223456899999999998888899999999999999999999999653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                      .....+...           .. .      .+...+..+.+++.+||..||.+||     ++.++++
T Consensus       228 ~~~~~i~~~-----------~~-~------~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          228 KTIDKILKC-----------KL-N------LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HHHHHHHHT-----------CC-C------CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HHHHHHHhC-----------CC-C------CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            111111110           00 0      0113345788999999999999999     7778764

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.84  E-value=4.3e-21  Score=128.35  Aligned_cols=132  Identities=15%  Similarity=0.173  Sum_probs=88.9

Q ss_pred             CccCCCC----ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDM----VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~----~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      |+++.++    .+||+|||++........   .....|++.|+|||.+.+..++.++|+||+|++++++++|..||....
T Consensus       139 il~~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  215 (283)
T 3bhy_A          139 IMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET  215 (283)
T ss_dssp             EEESCSSSSSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             EEEecCCCCCCceEEEecccceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc
Confidence            4566665    899999999987643221   233468999999999988888999999999999999999999986532


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH--HHHHHHHHh
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA--KLKKIKEKF  151 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~--~l~~~~~~~  151 (159)
                      ..  .....+.... ...             ........+..+.+++.+||..||.+|||+.++++  .++.+....
T Consensus       216 ~~--~~~~~~~~~~-~~~-------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~  276 (283)
T 3bhy_A          216 KQ--ETLTNISAVN-YDF-------------DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN  276 (283)
T ss_dssp             HH--HHHHHHHTTC-CCC-------------CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred             hH--HHHHHhHhcc-cCC-------------cchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence            11  1111111000 000             00011133557889999999999999999999996  566665543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.84  E-value=7.1e-22  Score=134.77  Aligned_cols=128  Identities=19%  Similarity=0.260  Sum_probs=68.9

Q ss_pred             CccCCCC---ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDM---VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.++   .+||+|||+++......  .......||+.|+|||++.+..++.++|+||+|++++++++|..||.....
T Consensus       137 Ill~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  214 (325)
T 3kn6_A          137 LLFTDENDNLEIKIIDFGFARLKPPDN--QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDR  214 (325)
T ss_dssp             EEEEC----CEEEECCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC----
T ss_pred             EEEecCCCcccEEEeccccceecCCCC--CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcc
Confidence            4565444   89999999998764322  123345689999999999888899999999999999999999999975332


Q ss_pred             cc--ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           78 GE--MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        78 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      ..  ................        .   ........+..+.+++.+||+.||.+|||+.+++
T Consensus       215 ~~~~~~~~~~~~~i~~~~~~--------~---~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell  269 (325)
T 3kn6_A          215 SLTCTSAVEIMKKIKKGDFS--------F---EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR  269 (325)
T ss_dssp             ---CCCHHHHHHHHTTTCCC--------C---CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred             ccccccHHHHHHHHHcCCCC--------C---CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence            11  1111111111111000        0   0001123456789999999999999999999887

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.84  E-value=5.4e-22  Score=136.97  Aligned_cols=135  Identities=19%  Similarity=0.234  Sum_probs=87.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||++......    ......||+.|+|||++.+..++.++|+||+|++++++++|..||........
T Consensus       163 il~~~~~~~kl~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  238 (360)
T 3eqc_A          163 ILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL  238 (360)
T ss_dssp             EEECTTCCEEECCCCCCHHHHHH----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHH
T ss_pred             EEECCCCCEEEEECCCCcccccc----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            57889999999999998754221    12234689999999999888899999999999999999999999875322111


Q ss_pred             cHHHHHHhh---------------------------cCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC
Q 035782           81 SLRDWVNKS---------------------------LSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ  133 (159)
Q Consensus        81 ~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  133 (159)
                      ..  .....                           ........++........ .......+..+.+++.+||+.||.+
T Consensus       239 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~  315 (360)
T 3eqc_A          239 EL--MFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPP-KLPSGVFSLEFQDFVNKCLIKNPAE  315 (360)
T ss_dssp             HH--HHC------------------------------CCCHHHHHHHHHHSCCC-CCCTTTSCHHHHHHHHHHHCSSTTT
T ss_pred             HH--HhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCC-CCCcccccHHHHHHHHHHhhcChhh
Confidence            00  00000                           000000111111111000 0011124567899999999999999


Q ss_pred             CCcHHHHHH
Q 035782          134 RIYMTDAAA  142 (159)
Q Consensus       134 Rpt~~~ll~  142 (159)
                      |||+.++++
T Consensus       316 Rpt~~ell~  324 (360)
T 3eqc_A          316 RADLKQLMV  324 (360)
T ss_dssp             SCCHHHHHT
T ss_pred             CCCHHHHhh
Confidence            999999984

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.84  E-value=2.2e-21  Score=129.94  Aligned_cols=123  Identities=20%  Similarity=0.171  Sum_probs=88.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++.......    .....|++.|+|||.+.+..++.++|+||+|++++++++|..||....... 
T Consensus       145 il~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-  219 (284)
T 2vgo_A          145 LLMGYKGELKIADFGWSVHAPSLR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE-  219 (284)
T ss_dssp             EEECTTCCEEECCCTTCEECSSSC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-
T ss_pred             EEEcCCCCEEEecccccccCcccc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH-
Confidence            578889999999999997654221    223568999999999988888999999999999999999999986532111 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH--HHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA--KLKKI  147 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~--~l~~~  147 (159)
                          .........        . .      .+...+..+.+++.+||+.||.+|||+.++++  .+...
T Consensus       220 ----~~~~~~~~~--------~-~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~  269 (284)
T 2vgo_A          220 ----THRRIVNVD--------L-K------FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN  269 (284)
T ss_dssp             ----HHHHHHTTC--------C-C------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             ----HHHHHhccc--------c-C------CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence                111100000        0 0      01123456889999999999999999999985  44443

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.84  E-value=9.5e-21  Score=135.47  Aligned_cols=122  Identities=24%  Similarity=0.245  Sum_probs=84.2

Q ss_pred             Ccc---CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILL---DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||+   +.++.+||+|||+++.+....   .....+||+.|+|||++.+ .++.++|+||+|++++++++|..||.....
T Consensus       152 il~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~  227 (486)
T 3mwu_A          152 ILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE  227 (486)
T ss_dssp             EEESSSSTTCCEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEEecCCCCCCEEEEECCcCeECCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            456   345679999999998764322   2233569999999999876 588999999999999999999999865321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ......+.....           .   ...+.....+..+.+++.+||..||.+|||+.++++
T Consensus       228 --~~~~~~i~~~~~-----------~---~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          228 --YDILKRVETGKY-----------A---FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             --HHHHHHHHHTCC-----------C---SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --HHHHHHHHhCCC-----------C---CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence              111111111100           0   000111234567889999999999999999999985

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.84  E-value=4.5e-21  Score=127.93  Aligned_cols=122  Identities=18%  Similarity=0.178  Sum_probs=85.5

Q ss_pred             Ccc---CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILL---DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |++   +.++.+||+|||++..+....   ......||+.|+|||.+.+. ++.++|+||+|++++++++|..||.....
T Consensus       137 il~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~  212 (277)
T 3f3z_A          137 FLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD  212 (277)
T ss_dssp             EEESSSSTTCCEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEEecCCCCCcEEEEecccceeccCcc---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH
Confidence            456   678899999999998764332   22335689999999988764 88999999999999999999999865322


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  .....+......            .+.  ......+..+.+++.+||+.||.+|||+.++++
T Consensus       213 ~--~~~~~~~~~~~~------------~~~--~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          213 S--EVMLKIREGTFT------------FPE--KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             H--HHHHHHHHCCCC------------CCH--HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             H--HHHHHHHhCCCC------------CCc--hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1  111111110000            000  000133567889999999999999999999985

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.84  E-value=1.7e-21  Score=141.06  Aligned_cols=121  Identities=21%  Similarity=0.296  Sum_probs=88.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+++.......   ....+||+.|+|||++.+..++.++|+||+|+++++|++|..||........
T Consensus       317 ILld~~g~vKL~DFGla~~~~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~  393 (576)
T 2acx_A          317 ILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK  393 (576)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC
T ss_pred             EEEeCCCCeEEEecccceecccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh
Confidence            6889999999999999987643322   2335799999999999988899999999999999999999999975322111


Q ss_pred             --cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 --SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                        .....+... ...                 .+...+..+.+++.+||..||.+||     ++.|+++
T Consensus       394 ~~~i~~~i~~~-~~~-----------------~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          394 REEVERLVKEV-PEE-----------------YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             HHHHHHHHHHC-CCC-----------------CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             HHHHHHHhhcc-ccc-----------------CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence              111111110 000                 0113446788999999999999999     7888873

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.84  E-value=4.5e-22  Score=133.48  Aligned_cols=129  Identities=19%  Similarity=0.189  Sum_probs=83.4

Q ss_pred             CccCCCCc--------eEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCC
Q 035782            1 ILLDEDMV--------AHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKP   71 (159)
Q Consensus         1 ili~~~~~--------~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p   71 (159)
                      ||++.++.        +||+|||++.....      .....|++.|+|||.+.+ ..++.++|+||+|++++++++|..+
T Consensus       144 Ill~~~~~~~~~~~~~~kl~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~  217 (289)
T 4fvq_A          144 ILLIREEDRKTGNPPFIKLSDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK  217 (289)
T ss_dssp             EEEEECCBGGGTBCCEEEECCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             EEEecCCcccccccceeeeccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCC
Confidence            45555555        99999999865421      122457889999998877 5688999999999999999996544


Q ss_pred             -CcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           72 -TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        72 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       +..... . ........ . ...                 +...+..+.+++.+||+.||.+|||+.++++.|+++...
T Consensus       218 ~~~~~~~-~-~~~~~~~~-~-~~~-----------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          218 PLSALDS-Q-RKLQFYED-R-HQL-----------------PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             TTTTSCH-H-HHHHHHHT-T-CCC-----------------CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             Cccccch-H-HHHHHhhc-c-CCC-----------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence             432211 1 00010100 0 000                 001233578899999999999999999999999988776


Q ss_pred             hhhhhc
Q 035782          151 FLDDVA  156 (159)
Q Consensus       151 ~~~~~~  156 (159)
                      .....+
T Consensus       277 ~~~~~~  282 (289)
T 4fvq_A          277 DLVPRG  282 (289)
T ss_dssp             ------
T ss_pred             CCCCCC
Confidence            554443

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.84  E-value=1.1e-21  Score=133.74  Aligned_cols=122  Identities=19%  Similarity=0.232  Sum_probs=79.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      |+++.++.+||+|||++.......  .......|++.|+|||++.     +..++.++|+||+|++++++++|..||...
T Consensus       160 Il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  237 (326)
T 2x7f_A          160 VLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM  237 (326)
T ss_dssp             EEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             EEEcCCCCEEEeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence            578889999999999997753221  1223356899999999876     446788999999999999999999998643


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ....  ....+.....   ..             ......+..+.+++.+||..||.+|||+.++++
T Consensus       238 ~~~~--~~~~~~~~~~---~~-------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          238 HPMR--ALFLIPRNPA---PR-------------LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             CHHH--HHHHHHHSCC---CC-------------CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cHHH--HHHHhhcCcc---cc-------------CCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            2111  1111111000   00             001133457889999999999999999999985

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.84  E-value=9.3e-22  Score=132.32  Aligned_cols=121  Identities=20%  Similarity=0.276  Sum_probs=88.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......|++.|+|||.+.+..++.++|+||+|++++++++|..||....... 
T Consensus       146 il~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-  222 (294)
T 2rku_A          146 LFLNEDLEVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-  222 (294)
T ss_dssp             EEECTTCCEEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-
T ss_pred             EEEcCCCCEEEEeccCceecccCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence            5788999999999999987642222  2233568999999999988888999999999999999999999986532111 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK  143 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~  143 (159)
                          ..........               ..+...+..+.+++.+||+.||.+|||+.++++.
T Consensus       223 ----~~~~~~~~~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          223 ----TYLRIKKNEY---------------SIPKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             ----HHHHHHTTCC---------------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ----HHHHHhhccC---------------CCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence                1110000000               0011334568899999999999999999999863

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.84  E-value=2.3e-21  Score=132.41  Aligned_cols=136  Identities=18%  Similarity=0.119  Sum_probs=80.0

Q ss_pred             CCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccccccH
Q 035782            4 DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSL   82 (159)
Q Consensus         4 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~   82 (159)
                      +.++.+||+|||+++.......  ......||+.|+|||++.+. .++.++|+||+|++++++++|..||......+. .
T Consensus       171 ~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~  247 (329)
T 3gbz_A          171 SETPVLKIGDFGLARAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ-L  247 (329)
T ss_dssp             --CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-H
T ss_pred             CccceEEECcCCCccccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH-H
Confidence            4456699999999987642221  23335689999999998765 479999999999999999999999875332111 1


Q ss_pred             HHHHHhh-cC--Ccccchhh--------hhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           83 RDWVNKS-LS--GELTQVID--------ANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        83 ~~~~~~~-~~--~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ....... .+  ..+.....        +..................+.+++.+||+.||.+|||+.|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          248 FKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             HHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            1111110 00  00000000        0000000011111224567889999999999999999999975

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=2.2e-21  Score=133.79  Aligned_cols=126  Identities=24%  Similarity=0.259  Sum_probs=86.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||+++.+.... ........||+.|+|||++.+.  .++.++|+||+|++++++++|..||......
T Consensus       190 Ill~~~~~~kl~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~  268 (355)
T 1vzo_A          190 ILLDSNGHVVLTDFGLSKEFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK  268 (355)
T ss_dssp             EEECTTSCEEESCSSEEEECCGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC
T ss_pred             EEECCCCcEEEeeCCCCeecccCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc
Confidence            578899999999999998764222 1122335689999999998753  4788999999999999999999998643221


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAAK  143 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~~  143 (159)
                      . .........            ....+   ..+...+..+.+++.+||..||.+||     |+.++++.
T Consensus       269 ~-~~~~~~~~~------------~~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          269 N-SQAEISRRI------------LKSEP---PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             C-CHHHHHHHH------------HHCCC---CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             c-hHHHHHHHH------------hccCC---CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            1 111111100            00000   01123445688999999999999999     89998853

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.84  E-value=1.2e-21  Score=137.25  Aligned_cols=125  Identities=18%  Similarity=0.211  Sum_probs=87.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc----cccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI----VSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~----~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      ||++.+|.+||+|||+++...... .......+||+.|+|||++.+..    ++.++|+||+|+++|+|++|..||....
T Consensus       199 ILl~~~g~ikL~DFG~a~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~  277 (410)
T 3v8s_A          199 MLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS  277 (410)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             eeECCCCCEEEeccceeEeeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC
Confidence            688999999999999998764322 22233467999999999886654    7899999999999999999999996532


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC--CCcHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ--RIYMTDAAA  142 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~~ll~  142 (159)
                      ..  .....+           +......   ..+........+.+++.+||..+|.+  ||++.|+++
T Consensus       278 ~~--~~~~~i-----------~~~~~~~---~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          278 LV--GTYSKI-----------MNHKNSL---TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             HH--HHHHHH-----------HTHHHHC---CCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             hh--hHHHHH-----------Hhccccc---cCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            11  111111           0000000   00001123457889999999999988  999999884

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.84  E-value=1.7e-21  Score=133.75  Aligned_cols=120  Identities=19%  Similarity=0.182  Sum_probs=83.4

Q ss_pred             CceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc-ccHHHH
Q 035782            7 MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE-MSLRDW   85 (159)
Q Consensus         7 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~-~~~~~~   85 (159)
                      +.+||+|||++........  .....+||+.|+|||++.+..++.++|+||+|++++++++|..||....... ......
T Consensus       157 ~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~  234 (342)
T 2qr7_A          157 ESIRICDFGFAKQLRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILAR  234 (342)
T ss_dssp             GGEEECCCTTCEECBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHH
T ss_pred             CeEEEEECCCcccCcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHH
Confidence            4599999999987643222  2234578999999999888788999999999999999999999997532111 111111


Q ss_pred             HHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           86 VNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      +......         ...     ......+..+.+++.+||..||.+|||+.++++
T Consensus       235 i~~~~~~---------~~~-----~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          235 IGSGKFS---------LSG-----GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHCCCC---------CCS-----TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HccCCcc---------cCc-----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1111000         000     001134567889999999999999999999985

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.83  E-value=8.1e-22  Score=134.96  Aligned_cols=120  Identities=20%  Similarity=0.287  Sum_probs=87.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      |+++.++.+||+|||++........  ......|++.|+|||++.+..++.++|+||+|++++++++|..||....... 
T Consensus       172 Il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-  248 (335)
T 2owb_A          172 LFLNEDLEVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-  248 (335)
T ss_dssp             EEECTTCCEEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-
T ss_pred             EEEcCCCCEEEeeccCceecccCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-
Confidence            5788999999999999987643222  2233568999999999888888999999999999999999999986532111 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ....+....           . .      .+......+.+++.+||+.||.+|||+.++++
T Consensus       249 -~~~~~~~~~-----------~-~------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          249 -TYLRIKKNE-----------Y-S------IPKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             -HHHHHHHTC-----------C-C------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             -HHHHHhcCC-----------C-C------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             000010000           0 0      01123456888999999999999999999985

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.83  E-value=3e-21  Score=132.84  Aligned_cols=140  Identities=19%  Similarity=0.171  Sum_probs=87.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc--------cccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV--------TQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKP   71 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p   71 (159)
                      ||++.++.+||+|||+++.........        ......||+.|+|||++.+ ..++.++|+||+|++++++++|..|
T Consensus       143 il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p  222 (353)
T 2b9h_A          143 LLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI  222 (353)
T ss_dssp             EEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             eEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCC
Confidence            578899999999999998764322111        1223468999999998654 5788999999999999999999999


Q ss_pred             CcccccccccHHHHHHhhcC-C----ccc--------chhhhhcc-ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           72 TDEMFIGEMSLRDWVNKSLS-G----ELT--------QVIDANLA-RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~-~----~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                      |........  ...+..... .    ...        ..+..... ............+..+.+++.+||+.||.+|||+
T Consensus       223 f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  300 (353)
T 2b9h_A          223 FPGRDYRHQ--LLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA  300 (353)
T ss_dssp             CCCSSHHHH--HHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             CCCCCcHHH--HHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCH
Confidence            975432111  111111000 0    000        00000000 0000011112455678999999999999999999


Q ss_pred             HHHHH
Q 035782          138 TDAAA  142 (159)
Q Consensus       138 ~~ll~  142 (159)
                      .++++
T Consensus       301 ~ell~  305 (353)
T 2b9h_A          301 KEALE  305 (353)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            99985

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.83  E-value=2.8e-21  Score=139.34  Aligned_cols=123  Identities=19%  Similarity=0.247  Sum_probs=87.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+++.+.....  .....+||+.|+|||++.+..++.++|+||+|+++|+|++|..||....... 
T Consensus       320 ILl~~~g~vkL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-  396 (543)
T 3c4z_A          320 VLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-  396 (543)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-
T ss_pred             EEEeCCCCEEEeecceeeeccCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-
Confidence            6889999999999999987643322  2233579999999999999889999999999999999999999997532111 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH-----HHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM-----TDAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~-----~~ll  141 (159)
                      .........        ..... .      .+...+..+.+++.+||..||.+||++     .+++
T Consensus       397 ~~~~~~~~i--------~~~~~-~------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~  447 (543)
T 3c4z_A          397 ENKELKQRV--------LEQAV-T------YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLR  447 (543)
T ss_dssp             CHHHHHHHH--------HHCCC-C------CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHH
T ss_pred             hHHHHHHHH--------hhccc-C------CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHH
Confidence            111111110        00000 0      012345678899999999999999964     5665

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.83  E-value=3.3e-21  Score=130.77  Aligned_cols=140  Identities=15%  Similarity=0.144  Sum_probs=81.1

Q ss_pred             CccCCCCc---eEEcccccceecCCCCCc-----ccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHh
Q 035782            1 ILLDEDMV---AHVSDFGISKLLGDGDDS-----VTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFT   67 (159)
Q Consensus         1 ili~~~~~---~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~   67 (159)
                      ||++.++.   +||+|||++.........     .......||+.|+|||++.+     ..++.++|+||+|++++++++
T Consensus       142 il~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~  221 (316)
T 2ac3_A          142 ILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS  221 (316)
T ss_dssp             EEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred             EEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHH
Confidence            46666655   999999998765322111     11223458999999998764     457889999999999999999


Q ss_pred             cCCCCcccccccccHHHHHHhhcCCcccchhhhhccccch-hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           68 RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        68 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      |..||......+..+....  ........+.......... ........+..+.+++.+||+.||.+|||+.|+++
T Consensus       222 g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          222 GYPPFVGRCGSDCGWDRGE--ACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             SSCSCCCCCCSCSCC------CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCcccccccccccccc--cchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            9999976433221100000  0000000000000000000 00001124567899999999999999999999986

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.83  E-value=2.9e-21  Score=138.04  Aligned_cols=122  Identities=25%  Similarity=0.262  Sum_probs=86.4

Q ss_pred             Ccc---CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILL---DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||+   +.++.+||+|||+++.+....   .....+||+.|+|||++.+ .++.++|+||+|++++++++|..||.....
T Consensus       157 il~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~  232 (484)
T 3nyv_A          157 LLLESKSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE  232 (484)
T ss_dssp             EEESSSSTTCCEEECCTTHHHHBCCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEEecCCCCCcEEEEeeeeeEEccccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH
Confidence            456   467899999999998764332   2233569999999998876 688999999999999999999999975321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ......+.....           .   ...+.....+..+.+++.+||+.||.+|||+.++++
T Consensus       233 --~~~~~~i~~~~~-----------~---~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          233 --YDILKKVEKGKY-----------T---FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             --HHHHHHHHHCCC-----------C---CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --HHHHHHHHcCCC-----------C---CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence              111111111100           0   000111234567889999999999999999999984

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.83  E-value=7.5e-21  Score=131.29  Aligned_cols=138  Identities=19%  Similarity=0.159  Sum_probs=81.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||++.......   ......||+.|+|||++.+ ..++.++|+||+|++++++++|..||.......
T Consensus       165 Il~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  241 (362)
T 3pg1_A          165 ILLADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN  241 (362)
T ss_dssp             EEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             EEEcCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence            578889999999999997643222   2233568899999998776 568899999999999999999999997532211


Q ss_pred             ccHHHHHHhhcCCc-----------ccchhhhhccccc--hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGE-----------LTQVIDANLARDE--QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      . ............           ....+.......+  ..........+.+.+++.+||+.||.+|||+.++++
T Consensus       242 ~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          242 Q-LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             H-HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             H-HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            0 111110000000           0001111111000  001112234567899999999999999999999985

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.83  E-value=5.6e-22  Score=133.77  Aligned_cols=123  Identities=18%  Similarity=0.167  Sum_probs=82.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCccccccccccccccccccc-----CCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYG-----SEGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~-----~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      |+++.++.+||+|||++......  ........|++.|+|||.+     .+..++.++|+||+|++++++++|..||...
T Consensus       148 il~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  225 (302)
T 2j7t_A          148 VLMTLEGDIRLADFGVSAKNLKT--LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL  225 (302)
T ss_dssp             EEECTTSCEEECCCHHHHHHHHH--HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             EEECCCCCEEEEECCCCcccccc--ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC
Confidence            57888999999999987543110  1112234689999999987     3556788999999999999999999998653


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ....  .........               ......+...+..+.+++.+||+.||.+|||+.++++
T Consensus       226 ~~~~--~~~~~~~~~---------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          226 NPMR--VLLKIAKSD---------------PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             CHHH--HHHHHHHSC---------------CCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             CHHH--HHHHHhccC---------------CcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            2111  111011000               0000111234567889999999999999999999984

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.83  E-value=3.9e-21  Score=128.13  Aligned_cols=119  Identities=24%  Similarity=0.373  Sum_probs=78.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||++........   .....|++.|+|||.+.+..+ +.++|+||+|++++++++|..||...... 
T Consensus       142 il~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-  217 (276)
T 2h6d_A          142 VLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP-  217 (276)
T ss_dssp             EEECTTSCEEECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH-
T ss_pred             EEECCCCCEEEeecccccccCCCcc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-
Confidence            5788899999999999987643221   223468899999999887655 68899999999999999999998643211 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       .....+....            ..      .+...+..+.+++.+||+.||.+|||+.++++
T Consensus       218 -~~~~~~~~~~------------~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          218 -TLFKKIRGGV------------FY------IPEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             -HHHHHHHHCC------------CC------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -HHHHHhhcCc------------cc------CchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence             1111111100            00      01123456889999999999999999999986

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.83  E-value=1.1e-20  Score=133.44  Aligned_cols=118  Identities=20%  Similarity=0.216  Sum_probs=75.9

Q ss_pred             CceEEcccccceecCCCCC-cccccccccccccccccccCC---CccccchhhHhHHHHHHHHHh-cCCCCccccccccc
Q 035782            7 MVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSE---GIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGEMS   81 (159)
Q Consensus         7 ~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~~~   81 (159)
                      ..+||+|||+++....... ........||+.|+|||++.+   ..++.++||||+||+++++++ |..||......   
T Consensus       160 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---  236 (432)
T 3p23_A          160 IKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---  236 (432)
T ss_dssp             CCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---
T ss_pred             eeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---
Confidence            4678999999987643221 122344679999999999873   456779999999999999999 88898542211   


Q ss_pred             HHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           82 LRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      .....   ........    .       .........+.+++.+||+.||.+|||+.+++
T Consensus       237 ~~~~~---~~~~~~~~----~-------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl  282 (432)
T 3p23_A          237 QANIL---LGACSLDC----L-------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVL  282 (432)
T ss_dssp             HHHHH---TTCCCCTT----S-------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             HHHHH---hccCCccc----c-------CccccccHHHHHHHHHHHhCCHhhCCCHHHHH
Confidence            00000   00000000    0       00123455678999999999999999999998

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.83  E-value=1.6e-21  Score=131.55  Aligned_cols=131  Identities=24%  Similarity=0.286  Sum_probs=83.7

Q ss_pred             CccCCCCceEEcccccceecCCCCC---cccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD---SVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      |+++.++.+||+|||++........   ........|++.|+|||++.+ ..++.++|+||+|++++++++|..||....
T Consensus       152 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  231 (303)
T 2vwi_A          152 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP  231 (303)
T ss_dssp             EEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             EEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCc
Confidence            5788899999999999976543221   111233468999999998765 357889999999999999999999987543


Q ss_pred             cccccHHHHHHhhcCCcccc-hhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQ-VIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..... ...... ....... ....         ......+..+.+++.+||+.||.+|||+.++++
T Consensus       232 ~~~~~-~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          232 PMKVL-MLTLQN-DPPSLETGVQDK---------EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             GGGHH-HHHHTS-SCCCTTC--------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hhhHH-HHHhcc-CCCccccccccc---------hhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            22111 111111 0000000 0000         001133457889999999999999999999985

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.83  E-value=6.1e-21  Score=131.41  Aligned_cols=135  Identities=18%  Similarity=0.093  Sum_probs=85.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++.....     .....||+.|+|||++.+ ..++.++|+||+|++++++++|..||......+
T Consensus       157 Il~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  231 (353)
T 3coi_A          157 LAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD  231 (353)
T ss_dssp             EEECTTCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH
T ss_pred             EeECCCCcEEEeecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            57889999999999999765321     223468999999998876 578899999999999999999999997533211


Q ss_pred             ccHHHHHHhhcCCccc------------chhhhhccc-cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELT------------QVIDANLAR-DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~------------~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ....+.........            ..+...... ...........+..+.+++.+||+.||.+|||+.++++
T Consensus       232 --~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          232 --QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             --HHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             --HHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence              11111110000000            000000000 00000111244678899999999999999999999984

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.83  E-value=1.2e-20  Score=135.26  Aligned_cols=128  Identities=22%  Similarity=0.245  Sum_probs=87.6

Q ss_pred             CccCC---CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDE---DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.   ++.+||+|||++..+....   .....+||+.|+|||++.+ .++.++|+||+|++++++++|..||.....
T Consensus       167 il~~~~~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~  242 (494)
T 3lij_A          167 LLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTD  242 (494)
T ss_dssp             EEESCSSTTCCEEECCCTTCEECBTTB---CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEEeCCCCCCcEEEEECCCCeECCCCc---cccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            45654   4569999999998765332   2334569999999998764 688999999999999999999999975322


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH--HHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA--KLKKIK  148 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~--~l~~~~  148 (159)
                      .  .....+.......              ..+.....+..+.+++.+||+.||.+|||+.++++  .+.+..
T Consensus       243 ~--~~~~~i~~~~~~~--------------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~  299 (494)
T 3lij_A          243 Q--EILRKVEKGKYTF--------------DSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMC  299 (494)
T ss_dssp             H--HHHHHHHHTCCCC--------------CSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHH
T ss_pred             H--HHHHHHHhCCCCC--------------CchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCc
Confidence            1  1111111110000              00001134557889999999999999999999983  455443

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.83  E-value=2.5e-21  Score=131.78  Aligned_cols=112  Identities=23%  Similarity=0.255  Sum_probs=83.3

Q ss_pred             CccC-CCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++ .++.+||+|||+++......    .....||+.|+|||++.+..+ +.++|+||+|++++++++|..||....  
T Consensus       180 Ill~~~~~~~kL~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--  253 (320)
T 3a99_A          180 ILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--  253 (320)
T ss_dssp             EEEETTTTEEEECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--
T ss_pred             EEEeCCCCCEEEeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--
Confidence            5677 67899999999998764322    223568999999998876655 678999999999999999999986421  


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                           ......            ..       .+...+..+.+++.+||+.||.+|||+.++++
T Consensus       254 -----~~~~~~------------~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          254 -----EIIRGQ------------VF-------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             -----HHHHCC------------CC-------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -----hhhccc------------cc-------ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                 000000            00       00123457889999999999999999999985

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.83  E-value=4.7e-21  Score=131.24  Aligned_cols=126  Identities=19%  Similarity=0.161  Sum_probs=67.1

Q ss_pred             CccCC---CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDE---DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.   ++.+||+|||+++......    .....||+.|+|||++.+..++.++|+||+|++++++++|..||.....
T Consensus       159 Ill~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  234 (336)
T 3fhr_A          159 LLYTSKEKDAVLKLTDFGFAKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG  234 (336)
T ss_dssp             EEESCSSTTCCEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             EEEEecCCCceEEEeccccceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccc
Confidence            45654   4569999999998764221    2235689999999999888899999999999999999999999865332


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ......          ....+.......+  .+.....+..+.+++.+||+.||.+|||+.++++
T Consensus       235 ~~~~~~----------~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          235 QAISPG----------MKRRIRLGQYGFP--NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             --------------------------CCC--TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hhhhhh----------HHHhhhccccccC--chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            111000          0000000000000  0011234567889999999999999999999996

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.82  E-value=1.6e-20  Score=126.45  Aligned_cols=123  Identities=24%  Similarity=0.256  Sum_probs=86.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC------CCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS------EGIVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~------~~~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      |+++.++.+||+|||++........   .....|++.|+|||++.      ...++.++|+||+|++++++++|..||..
T Consensus       155 il~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  231 (298)
T 1phk_A          155 ILLDDDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH  231 (298)
T ss_dssp             EEECTTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EEEcCCCcEEEecccchhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC
Confidence            5788999999999999987643322   23356899999999864      34678899999999999999999999864


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...  ......+....           ....   .+.....+..+.+++.+||+.||.+|||+.++++
T Consensus       232 ~~~--~~~~~~~~~~~-----------~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          232 RKQ--MLMLRMIMSGN-----------YQFG---SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             SSH--HHHHHHHHHTC-----------CCCC---TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccH--HHHHHHHhcCC-----------cccC---cccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            321  11111111100           0000   0011234567899999999999999999999985

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.82  E-value=1.2e-20  Score=128.43  Aligned_cols=124  Identities=23%  Similarity=0.300  Sum_probs=84.5

Q ss_pred             CccCCCC---ceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDM---VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      ||++.++   .+||+|||++.......   ......||+.|+|||++.   ...++.++|+||+|++++++++|..||..
T Consensus       145 Il~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  221 (322)
T 2ycf_A          145 VLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE  221 (322)
T ss_dssp             EEESSSSSSCCEEECCCTTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             EEEecCCCCCeEEEccCccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence            4666554   49999999998764221   223356899999999863   45678899999999999999999999865


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..... .....+.........              ......+..+.+++.+||..||.+|||+.++++
T Consensus       222 ~~~~~-~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          222 HRTQV-SLKDQITSGKYNFIP--------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             TTCSS-CHHHHHHHTCCCCCH--------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cchHH-HHHHHHHhCccccCc--------------hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            32211 111111111100000              001134567889999999999999999999983

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.82  E-value=3.5e-21  Score=135.93  Aligned_cols=126  Identities=20%  Similarity=0.244  Sum_probs=86.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||++.+|.+||+|||+++....... ......+||+.|+|||++.     ...++.++|+||+|+++++|++|..||...
T Consensus       206 ILl~~~g~vkL~DFGla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~  284 (437)
T 4aw2_A          206 ILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE  284 (437)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             eeEcCCCCEEEcchhhhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC
Confidence            6889999999999999987643322 2233467999999999876     456899999999999999999999999753


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC--CCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ--RIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~~ll~  142 (159)
                      ...+. +........          .+ ..+.   ........+.+++.+||..+|.+  |++++|+++
T Consensus       285 ~~~~~-~~~i~~~~~----------~~-~~p~---~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          285 SLVET-YGKIMNHKE----------RF-QFPT---QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             SHHHH-HHHHHTHHH----------HC-CCCS---SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             ChhHH-HHhhhhccc----------cc-cCCc---ccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            21110 111110000          00 0000   00123457888999999888888  999999874

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.82  E-value=1.8e-20  Score=134.62  Aligned_cols=122  Identities=21%  Similarity=0.211  Sum_probs=85.3

Q ss_pred             CccCCCC---ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDM---VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.++   .+||+|||++..+....   ......||+.|+|||++.+ .++.++|+||+|++++++++|..||.....
T Consensus       177 il~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~  252 (504)
T 3q5i_A          177 ILLENKNSLLNIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND  252 (504)
T ss_dssp             EEESSTTCCSSEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEEecCCCCccEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            4666554   69999999998774332   2233569999999998875 688999999999999999999999975321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  .....+....           ..   .........+..+.+++.+||..||.+|||+.|+++
T Consensus       253 ~--~~~~~i~~~~-----------~~---~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          253 Q--DIIKKVEKGK-----------YY---FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             H--HHHHHHHHCC-----------CC---CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             H--HHHHHHHcCC-----------CC---CCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            1  1111111100           00   000011234567899999999999999999999984

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.82  E-value=6e-21  Score=133.86  Aligned_cols=125  Identities=22%  Similarity=0.261  Sum_probs=84.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-------CCccccchhhHhHHHHHHHHHhcCCCCc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-------EGIVSTKCDVYSYGVLLMETFTRKKPTD   73 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-------~~~~~~~~dv~s~g~~~~~~~~~~~p~~   73 (159)
                      ||++.+|.+||+|||+++....... ......+||+.|+|||++.       ...++.++|+||+|+++|+|++|..||.
T Consensus       193 ILld~~g~vkL~DFGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~  271 (412)
T 2vd5_A          193 ILLDRCGHIRLADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY  271 (412)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             eeecCCCCEEEeechhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCC
Confidence            6889999999999999987643322 1223457999999999876       3568899999999999999999999996


Q ss_pred             ccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCC---CcHHHHHH
Q 035782           74 EMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQR---IYMTDAAA  142 (159)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R---pt~~~ll~  142 (159)
                      ...... .+.......          ..+. .+.   .....+..+.+++.+||. +|.+|   |+++|+++
T Consensus       272 ~~~~~~-~~~~i~~~~----------~~~~-~p~---~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          272 ADSTAE-TYGKIVHYK----------EHLS-LPL---VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             CSSHHH-HHHHHHTHH----------HHCC-CC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             CCCHHH-HHHHHHhcc----------cCcC-CCc---cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            532111 011100000          0000 000   011345678899999999 99998   58888863

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.81  E-value=1.4e-20  Score=127.69  Aligned_cols=140  Identities=14%  Similarity=0.167  Sum_probs=85.8

Q ss_pred             CccC-CCCceEEcccccceecCCCCC-cccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLD-EDMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~-~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++ .++.+||+|||+++....... ........++..|+|||.+.+ ..++.++|+||+|++++++++|..||.....
T Consensus       151 il~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~  230 (320)
T 2i6l_A          151 LFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE  230 (320)
T ss_dssp             EEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH
Confidence            4665 567999999999987642211 111233457889999998755 5788999999999999999999999975432


Q ss_pred             ccccHHHHHHhhcCCcc-----------cchhhhhcc-ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGEL-----------TQVIDANLA-RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  .....+....+...           ...+..... ............+..+.+++.+||+.||.+|||+.++++
T Consensus       231 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          231 L--EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             H--HHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             H--HHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            1  11111111111000           000000000 000001111234667899999999999999999999985

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.80  E-value=3.5e-20  Score=125.57  Aligned_cols=112  Identities=24%  Similarity=0.295  Sum_probs=83.2

Q ss_pred             CccC-CCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      |+++ .++.+||+|||++.......    .....|++.|+|||++.+..+ +.++|+||+|++++++++|..||....  
T Consensus       170 il~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--  243 (312)
T 2iwi_A          170 ILIDLRRGCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--  243 (312)
T ss_dssp             EEEETTTTEEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--
T ss_pred             EEEeCCCCeEEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH--
Confidence            4677 78999999999998764322    233568999999998876655 458999999999999999999986421  


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                           .....            ...       .+......+.+++.+||+.||.+|||+.++++
T Consensus       244 -----~~~~~------------~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          244 -----EILEA------------ELH-------FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             -----HHHHT------------CCC-------CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             -----HHhhh------------ccC-------CcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                 00000            000       01133456889999999999999999999986

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.80  E-value=1e-19  Score=122.03  Aligned_cols=122  Identities=24%  Similarity=0.233  Sum_probs=83.5

Q ss_pred             CccCC---CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDE---DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.   ++.+||+|||++........   .....|++.|+|||.+.+ .++.++|+||+|++++++++|..||.....
T Consensus       152 Ilv~~~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~  227 (287)
T 2wei_A          152 ILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE  227 (287)
T ss_dssp             EEESCSSTTCCEEECSTTGGGTBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEEecCCCcccEEEeccCcceeecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH
Confidence            45544   34799999999987643222   223458899999998876 478899999999999999999999865321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  .....+.....           .   ...+.....+..+.+++.+||..||.+|||+.++++
T Consensus       228 ~--~~~~~~~~~~~-----------~---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          228 Y--DILKRVETGKY-----------A---FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             H--HHHHHHHHCCC-----------C---CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             H--HHHHHHHcCCC-----------C---CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            1  11111111100           0   000111234567889999999999999999999986

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.79  E-value=1.6e-19  Score=120.73  Aligned_cols=110  Identities=11%  Similarity=0.132  Sum_probs=77.3

Q ss_pred             CCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccccccHH
Q 035782            5 EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLR   83 (159)
Q Consensus         5 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~   83 (159)
                      ..+.+||+|||.+.......      ...|++.|+|||.+.+. .++.++|+||+|++++++++|..++....    ...
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~  238 (289)
T 1x8b_A          169 NKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----QWH  238 (289)
T ss_dssp             -CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----HHH
T ss_pred             CceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh----HHH
Confidence            44579999999998764322      23489999999988765 56789999999999999999887653211    111


Q ss_pred             HHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           84 DWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      . +....           ...      .+...+..+.+++.+||+.||.+|||+.++++
T Consensus       239 ~-~~~~~-----------~~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          239 E-IRQGR-----------LPR------IPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             H-HHTTC-----------CCC------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             H-HHcCC-----------CCC------CCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            1 11100           000      01134467889999999999999999999874

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.79  E-value=1.4e-19  Score=121.86  Aligned_cols=124  Identities=20%  Similarity=0.213  Sum_probs=76.9

Q ss_pred             CccCCCCceEEcccccceecCCCCC------------cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHh
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD------------SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFT   67 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~   67 (159)
                      |+++.++.+||+|||++........            ........|++.|+|||++.+. .++.++|+||+|++++++++
T Consensus       147 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  226 (303)
T 1zy4_A          147 IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY  226 (303)
T ss_dssp             EEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred             EEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence            5788999999999999976542210            1112335688999999998765 68899999999999999997


Q ss_pred             cCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           68 RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        68 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                         ||..... .......+... ...        ...     ..+...+..+.+++.+||+.||.+|||+.++++
T Consensus       227 ---p~~~~~~-~~~~~~~~~~~-~~~--------~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          227 ---PFSTGME-RVNILKKLRSV-SIE--------FPP-----DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             ---CCSSHHH-HHHHHHHHHST-TCC--------CCT-----TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---ccCCchh-HHHHHHhcccc-ccc--------cCc-----cccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence               4432111 01111111100 000        000     011234556889999999999999999999985

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.77  E-value=7.4e-19  Score=128.94  Aligned_cols=142  Identities=19%  Similarity=0.192  Sum_probs=87.1

Q ss_pred             CccCCCC---ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDM---VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.++   .+||+|||++.......   ......|++.|+|||.+.+..++.++|+||+|++++++++|..||.....
T Consensus       152 ILl~~~g~~~~vKL~DFG~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~  228 (676)
T 3qa8_A          152 IVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ  228 (676)
T ss_dssp             EEEECCSSSCEEEECSCCCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH
T ss_pred             eEeecCCCceeEEEccccccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc
Confidence            4566554   48999999998764332   22335689999999999988899999999999999999999999864211


Q ss_pred             ccccHHHHHHhhcCCcc-----cchhhhhc--cc-cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH-----HHH
Q 035782           78 GEMSLRDWVNKSLSGEL-----TQVIDANL--AR-DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA-----AKL  144 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll-----~~l  144 (159)
                          ...|.........     ........  .. .+.........+..+.+++.+||..||.+|||+.+++     +.+
T Consensus       229 ----~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l  304 (676)
T 3qa8_A          229 ----PVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL  304 (676)
T ss_dssp             ----HHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred             ----hhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence                1111000000000     00000000  00 0011112234677899999999999999999998844     555


Q ss_pred             HHHHH
Q 035782          145 KKIKE  149 (159)
Q Consensus       145 ~~~~~  149 (159)
                      +.+.+
T Consensus       305 ~~iL~  309 (676)
T 3qa8_A          305 DSILS  309 (676)
T ss_dssp             HHHHC
T ss_pred             HHHHh
Confidence            55443

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.74  E-value=3.3e-18  Score=126.80  Aligned_cols=118  Identities=20%  Similarity=0.279  Sum_probs=85.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+ .+||+|||+++.....      +...||+.|+|||++.+.. +.++||||+|++++++++|..||....... 
T Consensus       213 Ill~~~-~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-  283 (681)
T 2pzi_A          213 IMLTEE-QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG-  283 (681)
T ss_dssp             EEECSS-CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS-
T ss_pred             eEEeCC-cEEEEecccchhcccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc-
Confidence            466664 8999999999876432      3356899999999876643 789999999999999999988765422110 


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-HHHHHHHHHHHHHHhh
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-MTDAAAKLKKIKEKFL  152 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-~~~ll~~l~~~~~~~~  152 (159)
                                   ..       ...     ........+.+++.+||+.||.+||+ ++++.+.|..+.++..
T Consensus       284 -------------~~-------~~~-----~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~  331 (681)
T 2pzi_A          284 -------------LP-------EDD-----PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREVV  331 (681)
T ss_dssp             -------------CC-------TTC-----HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHHH
T ss_pred             -------------cc-------ccc-----cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHhh
Confidence                         00       000     01123457889999999999999995 7777788888776554

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.68  E-value=7.8e-17  Score=108.62  Aligned_cols=106  Identities=17%  Similarity=0.189  Sum_probs=68.8

Q ss_pred             CccCC---CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDE---DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      |+++.   ++.+||+|||++....                        +..++.++|+||+|++++++++|..||.....
T Consensus       148 il~~~~~~~~~~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~  203 (299)
T 3m2w_A          148 LLYTSKRPNAILKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG  203 (299)
T ss_dssp             EEESSSSTTCCEEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---
T ss_pred             EEEecCCCCCcEEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence            46666   7889999999986542                        13467889999999999999999999864321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..          ........+.......  ........+..+.+++.+||+.||.+|||+.|+++
T Consensus       204 ~~----------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          204 LA----------ISPGMKTRIRMGQYEF--PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             --------------CCSCCSSCTTCCSS--CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hh----------hhHHHHHHHhhccccC--CchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            10          0000000000000000  00111234667899999999999999999999985

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.58  E-value=3.6e-15  Score=100.02  Aligned_cols=88  Identities=13%  Similarity=0.046  Sum_probs=58.8

Q ss_pred             cccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccc-cchhhhhchHHHHHHHHHHhhhc
Q 035782           49 VSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLAR-DEQSFFVKMDCLSSIMHLALDCC  127 (159)
Q Consensus        49 ~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl  127 (159)
                      ++.++|+||+|+++|++++|..||........             ..... ..+.. ...........+..+.+++.+||
T Consensus       179 ~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-------------~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l  244 (286)
T 3uqc_A          179 ANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-------------LAPAE-RDTAGQPIEPADIDRDIPFQISAVAARSV  244 (286)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-------------SEECC-BCTTSCBCCHHHHCTTSCHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-------------hHHHH-HHhccCCCChhhcccCCCHHHHHHHHHHc
Confidence            57889999999999999999999875322110             00000 00000 00011112245667899999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHh
Q 035782          128 MESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus       128 ~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      +.||.+| |+.++++.|+++....
T Consensus       245 ~~dP~~R-s~~el~~~L~~~~~~~  267 (286)
T 3uqc_A          245 QGDGGIR-SASTLLNLMQQATAVA  267 (286)
T ss_dssp             CTTSSCC-CHHHHHHHHHHHHC--
T ss_pred             ccCCccC-CHHHHHHHHHHHhccC
Confidence            9999999 9999999999987543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.55  E-value=2.6e-15  Score=102.73  Aligned_cols=109  Identities=12%  Similarity=0.082  Sum_probs=70.9

Q ss_pred             ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHH-HHHHHhcCCCCcccccccccHHHHH
Q 035782            8 VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVL-LMETFTRKKPTDEMFIGEMSLRDWV   86 (159)
Q Consensus         8 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~-~~~~~~~~~p~~~~~~~~~~~~~~~   86 (159)
                      .+||+|||+++.....       ..+||+.|+|||++.+.. +.++||||++++ .++++.|..||....     +....
T Consensus       220 ~vkL~DFG~a~~~~~~-------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~-----~~~~~  286 (336)
T 2vuw_A          220 QVSIIDYTLSRLERDG-------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL-----WLHYL  286 (336)
T ss_dssp             EEEECCCTTCBEEETT-------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH-----HHHHH
T ss_pred             eEEEeeccccEecCCC-------cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh-----hhhHH
Confidence            8999999999876421       246899999999998766 889999998776 666777888864310     00000


Q ss_pred             HhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782           87 NKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA  141 (159)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll  141 (159)
                      .       ..+..................+..+.+++.+||+.|     |+.|++
T Consensus       287 ~-------~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          287 T-------DKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             H-------HHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             H-------HhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence            0       000000000011111123467788999999999977     888887

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.97  E-value=1.9e-11  Score=89.07  Aligned_cols=65  Identities=17%  Similarity=-0.035  Sum_probs=36.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTR   68 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~   68 (159)
                      ||++.+|.+||+|||+|+......  ...+..+||+.|++||++.+ .+...+|+|++|++.+.+..+
T Consensus       370 ILL~~dg~vKL~DFGlAr~~~~~~--~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          370 VMVDARQHARLIDFGSIVTTPQDC--SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             EEECTTSCEEECCCTTEESCC-----CCSHHHHHHHHHHHHHHC------------------CCCCTT
T ss_pred             EEECCCCCEEEeecccCeeCCCCC--ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccc
Confidence            689999999999999998764322  22344679999999999876 456678999999887665544

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.24  E-value=5.3e-08  Score=70.71  Aligned_cols=70  Identities=17%  Similarity=0.181  Sum_probs=51.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-----cccccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-----TQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPT   72 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~   72 (159)
                      ||++.  .+||+|||+++.........     ......||+.|+|||++..  ..|+...|.|+..+-..+...++.+|
T Consensus       462 ILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          462 FIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             EEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             EEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            46666  89999999999874322111     1234679999999999876  46788889999888877777666554

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=92.00  E-value=0.058  Score=35.85  Aligned_cols=19  Identities=21%  Similarity=0.251  Sum_probs=16.0

Q ss_pred             CccCCCCceEEcccccceec
Q 035782            1 ILLDEDMVAHVSDFGISKLL   20 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~   20 (159)
                      ||++ ++.+||+|||+++..
T Consensus       224 ILl~-~~~vkl~DFG~a~~~  242 (282)
T 1zar_A          224 VLVS-EEGIWIIDFPQSVEV  242 (282)
T ss_dssp             EEEE-TTEEEECCCTTCEET
T ss_pred             EEEE-CCcEEEEECCCCeEC
Confidence            5778 899999999998653

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=84.91  E-value=0.42  Score=31.15  Aligned_cols=18  Identities=22%  Similarity=0.248  Sum_probs=14.5

Q ss_pred             CccCCCCceEEcccccceec
Q 035782            1 ILLDEDMVAHVSDFGISKLL   20 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~   20 (159)
                      ||++.  .++|+|||+|...
T Consensus       202 ILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          202 IMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             EEESS--SEEECCCTTCEET
T ss_pred             EEEcC--cEEEEECcccccC
Confidence            46666  8999999999765

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=83.96  E-value=2.4  Score=27.27  Aligned_cols=30  Identities=13%  Similarity=0.183  Sum_probs=18.9

Q ss_pred             ccccccccCCCccccchhhHhHHHHHHHHHh
Q 035782           37 GYMAPEYGSEGIVSTKCDVYSYGVLLMETFT   67 (159)
Q Consensus        37 ~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~   67 (159)
                      .+.+||... ...+.+.-|||+|+++|.-+-
T Consensus       102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A          102 PPVAGKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             -----CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence            356777653 244577889999999998874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	159
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-27
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-24
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-24
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	7e-22
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-21
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-21
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-21
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-20
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-20
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	9e-20
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-19
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	8e-19
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	9e-19
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	9e-19
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-18
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-18
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-18
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	9e-18
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-17
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-17
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	7e-17
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	8e-17
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	8e-17
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-16
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-15
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-15
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-14
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-14
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-14
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	7e-14
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-13
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-12
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-12
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-12
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-11
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	9e-11
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-10
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-10
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-10
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-10
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-09
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-09
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-09
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-08
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-08
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	6e-08
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-06
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-04

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.7 bits (248), Expect = 8e-27
 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 17/152 (11%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEY---GSEGIVSTKCDVYS 57
           I L ED+   + DFG++ +      S        +I +MAPE      +   S + DVY+
Sbjct: 135 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194

Query: 58  YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLS 117
           +G++L E  T + P   +   +  +       LS +L++V                +C  
Sbjct: 195 FGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS--------------NCPK 240

Query: 118 SIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
           ++  L  +C  +  D+R       A ++ +  
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILASIELLAR 272

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.3 bits (231), Expect = 4e-24
 Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 20/156 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT--MATIGYMAPEYGSEGIVSTKCDVYSY 58
            +LDE     V+DFG+++ + D +       T     + +MA E       +TK DV+S+
Sbjct: 161 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 220

Query: 59  GVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSS 118
           GVLL E  TR  P       +++  D     L G                      C   
Sbjct: 221 GVLLWELMTRGAP----PYPDVNTFDITVYLLQGR--------------RLLQPEYCPDP 262

Query: 119 IMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD 154
           +  + L C     + R   ++  +++  I   F+ +
Sbjct: 263 LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 298

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.6 bits (229), Expect = 6e-24
 Identities = 27/159 (16%), Positives = 59/159 (37%), Gaps = 10/159 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT--MATIGYMAPEYGSEGI------VSTK 52
           IL+ ++    ++D G++       D++       + T  YMAPE   + I         +
Sbjct: 139 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 198

Query: 53  CDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQ--VIDANLARDEQSFF 110
            D+Y+ G++  E   R          ++   D V    S E  +  V +  L  +  + +
Sbjct: 199 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW 258

Query: 111 VKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
              + L  +  +  +C   +   R+        L ++ +
Sbjct: 259 QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 86.8 bits (214), Expect = 7e-22
 Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 18/149 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ E+MV  ++DFG+S+ +   D           I +M PE       +T+ DV++YGV
Sbjct: 171 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGV 230

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           +L E F+            M+  + +     G +    +              +C   + 
Sbjct: 231 VLWEIFSYGLQPYY----GMAHEEVIYYVRDGNILACPE--------------NCPLELY 272

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIKE 149
           +L   C  + P  R         L+++ E
Sbjct: 273 NLMRLCWSKLPADRPSFCSIHRILQRMCE 301

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.0 bits (212), Expect = 1e-21
 Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 19/150 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           IL++ ++V  VSDFG+S++L D  ++  T +     I + APE  S    ++  DV+S+G
Sbjct: 141 ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFG 200

Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           +++ E  T  +      +    +   +N                         MDC S+I
Sbjct: 201 IVMWEVMTYGERPYWE-LSNHEVMKAINDGFRLPTP-----------------MDCPSAI 242

Query: 120 MHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
             L + C  +   +R    D  + L K+  
Sbjct: 243 YQLMMQCWQQERARRPKFADIVSILDKLIR 272

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.2 bits (210), Expect = 3e-21
 Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 19/147 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E++V  V+DFG+++L+ D + +  Q      I + APE    G  + K DV+S+G+
Sbjct: 144 ILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGI 202

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           LL E  T+ +         M  R+ +++   G                     +C  S+ 
Sbjct: 203 LLTELTTKGRV----PYPGMVNREVLDQVERGYRMPCPP--------------ECPESLH 244

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKI 147
            L   C  + P++R       A L+  
Sbjct: 245 DLMCQCWRKEPEERPTFEYLQAFLEDY 271

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.0 bits (207), Expect = 5e-21
 Identities = 33/149 (22%), Positives = 59/149 (39%), Gaps = 19/149 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ E+ V  VSDFG+++ + D   + +       + + +PE  S    S+K DV+S+GV
Sbjct: 132 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGT-KFPVKWASPEVFSFSRYSSKSDVWSFGV 190

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           L+ E F+  K          S  + V    +G                 +      + + 
Sbjct: 191 LMWEVFSEGKI----PYENRSNSEVVEDISTGF--------------RLYKPRLASTHVY 232

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            +   C  E P+ R   +    +L +I E
Sbjct: 233 QIMNHCWKERPEDRPAFSRLLRQLAEIAE 261

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 83.6 bits (206), Expect = 1e-20
 Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 21/152 (13%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT---MATIGYMAPEYGSEGIVSTKCDVYS 57
           IL++ ++V  VSDFG+S+ L D     T T        I + APE       ++  DV+S
Sbjct: 159 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS 218

Query: 58  YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLS 117
           YG+++ E  +  +        +M+ +D +N                         MDC S
Sbjct: 219 YGIVMWEVMSYGERPYW----DMTNQDVINAIEQDY--------------RLPPPMDCPS 260

Query: 118 SIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149
           ++  L LDC  +  + R         L K+  
Sbjct: 261 ALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.8 bits (204), Expect = 1e-20
 Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 23/148 (15%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED VA VSDFG++K         TQ      + + APE   E   STK DV+S+G+
Sbjct: 134 VLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGI 188

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           LL E ++  +         + L+D V +   G      D               C  ++ 
Sbjct: 189 LLWEIYSFGRV----PYPRIPLKDVVPRVEKGYKMDAPD--------------GCPPAVY 230

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIK 148
            +  +C       R        +L+ IK
Sbjct: 231 EVMKNCWHLDAAMRPSFLQLREQLEHIK 258

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.9 bits (199), Expect = 9e-20
 Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 19/160 (11%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK LG  D   T        + + APE  +    S++ DV+SYG
Sbjct: 140 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 199

Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           V + E  +  +        +M   + +     G+  +                 +C   +
Sbjct: 200 VTMWEALSYGQK----PYKKMKGPEVMAFIEQGKRMECPP--------------ECPPEL 241

Query: 120 MHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDVASTN 159
             L  DC +   + R        +++         V   +
Sbjct: 242 YALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHH 281

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.6 bits (193), Expect = 5e-19
 Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 19/147 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+++  V  VSDFG+S+ + D D+  +   +   + +  PE       S+K D++++GV
Sbjct: 131 CLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGV 189

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           L+ E ++  K   E      +  +       G                 +        + 
Sbjct: 190 LMWEIYSLGKMPYE----RFTNSETAEHIAQGL--------------RLYRPHLASEKVY 231

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKI 147
            +   C  E  D+R       + +  +
Sbjct: 232 TIMYSCWHEKADERPTFKILLSNILDV 258

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 78.6 bits (193), Expect = 8e-19
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 19/150 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            L+ E+ +  V+DFG+S+L+  GD           I + APE  +    S K DV+++GV
Sbjct: 146 CLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 204

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           LL E  T         I    + + + K    E  +                  C   + 
Sbjct: 205 LLWEIATYGMSPYPG-IDLSQVYELLEKDYRMERPE-----------------GCPEKVY 246

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
            L   C   +P  R    +     + + ++
Sbjct: 247 ELMRACWQWNPSDRPSFAEIHQAFETMFQE 276

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (193), Expect = 8e-19
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 21/150 (14%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ E+ VA ++DFG+S+     +  V +TM    + +MA E  +  + +T  DV+SYGV
Sbjct: 158 ILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 214

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           LL E  +            M+  +   K   G                    ++C   + 
Sbjct: 215 LLWEIVSLGGT----PYCGMTCAELYEKLPQGY--------------RLEKPLNCDDEVY 256

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
            L   C  E P +R         L ++ E+
Sbjct: 257 DLMRQCWREKPYERPSFAQILVSLNRMLEE 286

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.2 bits (192), Expect = 9e-19
 Identities = 31/148 (20%), Positives = 50/148 (33%), Gaps = 19/148 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL     A +SDFG+SK L   ++           + + APE  +    S+K DV+S+G
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 197

Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           VL+ E F+  +         M   +       GE                     C   +
Sbjct: 198 VLMWEAFSYGQK----PYRGMKGSEVTAMLEKGERMGCPA--------------GCPREM 239

Query: 120 MHLALDCCMESPDQRIYMTDAAAKLKKI 147
             L   C     + R        +L+  
Sbjct: 240 YDLMNLCWTYDVENRPGFAAVELRLRNY 267

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (193), Expect = 9e-19
 Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 18/149 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+       ++DFG++KLLG  +           I +MA E     I + + DV+SYGV
Sbjct: 142 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 201

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
            + E  T            +   +  +    GE                     C   + 
Sbjct: 202 TVWELMTFGSK----PYDGIPASEISSILEKGERLPQPP--------------ICTIDVY 243

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIKE 149
            + + C M   D R    +   +  K+  
Sbjct: 244 MIMVKCWMIDADSRPKFRELIIEFSKMAR 272

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.9 bits (191), Expect = 2e-18
 Identities = 29/145 (20%), Positives = 53/145 (36%), Gaps = 17/145 (11%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+    V  + DFG+++ +    + V +      + +MAPE   EGI + K DV+SYG+
Sbjct: 195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGI 254

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           LL E F+                 +    +     ++I      D+            I 
Sbjct: 255 LLWEIFSLGVNP------------YPGIPVDANFYKLIQNGFKMDQPF-----YATEEIY 297

Query: 121 HLALDCCMESPDQRIYMTDAAAKLK 145
            +   C      +R    +  + L 
Sbjct: 298 IIMQSCWAFDSRKRPSFPNLTSFLG 322

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 5e-18
 Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 19/147 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+ + +   ++DFG+++L+ D ++   +      I + APE  + G  + K DV+S+G+
Sbjct: 140 ILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 198

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           LL E  T  +         M+  + +     G      D              +C   + 
Sbjct: 199 LLTEIVTHGRI----PYPGMTNPEVIQNLERGYRMVRPD--------------NCPEELY 240

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKI 147
            L   C  E P+ R       + L+  
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRSVLEDF 267

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.1 bits (186), Expect = 9e-18
 Identities = 31/157 (19%), Positives = 63/157 (40%), Gaps = 18/157 (11%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            ++ ED    + DFG+++ + + D        +  + +M+PE   +G+ +T  DV+S+GV
Sbjct: 164 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV 223

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           +L E  T  +   +     +S    +   + G L    D              +C   + 
Sbjct: 224 VLWEIATLAEQPYQ----GLSNEQVLRFVMEGGLLDKPD--------------NCPDMLF 265

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDVAS 157
            L   C   +P  R    +  + +K+  E    +V+ 
Sbjct: 266 ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 302

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.4 bits (185), Expect = 9e-18
 Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 21/140 (15%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           + LD      + DFG++++L   D S  +     T  YM+PE  +    + K D++S G 
Sbjct: 145 VFLDGKQNVKLGDFGLARILNH-DTSFAKAFVG-TPYYMSPEQMNRMSYNEKSDIWSLGC 202

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           LL E      P         S ++   K   G+  ++                     + 
Sbjct: 203 LLYELCALMPPFT-----AFSQKELAGKIREGKFRRIPY--------------RYSDELN 243

Query: 121 HLALDCCMESPDQRIYMTDA 140
            +           R  + + 
Sbjct: 244 EIITRMLNLKDYHRPSVEEI 263

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.6 bits (180), Expect = 5e-17
 Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 18/149 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +LL    +  + DFG+ + L   DD  V Q        + APE       S   D + +G
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201

Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           V L E FT  +         ++    ++K             + ++ +      DC   I
Sbjct: 202 VTLWEMFTYGQEPWI----GLNGSQILHK-------------IDKEGERLPRPEDCPQDI 244

Query: 120 MHLALDCCMESPDQRIYMTDAAAKLKKIK 148
            ++ + C    P+ R         L + +
Sbjct: 245 YNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 6e-17
 Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 4/133 (3%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL++      + DFG+S  L D          + T  YM+PE       S + D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
            L+E    + P       E+ L            T        R   S+ +      +I 
Sbjct: 192 SLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIF 251

Query: 121 HLALDCCMESPDQ 133
            L      E P +
Sbjct: 252 ELLDYIVNEPPPK 264

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.1 bits (179), Expect = 7e-17
 Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 22/140 (15%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
            +        + D G++ L      S  + + + T  +MAPE   E       DVY++G+
Sbjct: 146 FITGPTGSVKIGDLGLATLK---RASFAKAV-IGTPEFMAPEMYEEK-YDESVDVYAFGM 200

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
            ++E  T + P    +    +      +  SG      D                +  + 
Sbjct: 201 CMLEMATSEYP----YSECQNAAQIYRRVTSGVKPASFDKV-------------AIPEVK 243

Query: 121 HLALDCCMESPDQRIYMTDA 140
            +   C  ++ D+R  + D 
Sbjct: 244 EIIEGCIRQNKDERYSIKDL 263

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 8e-17
 Identities = 23/147 (15%), Positives = 50/147 (34%), Gaps = 17/147 (11%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL    +  + DFG+++ + +  + V +      + +MAPE     + + + DV+SYG+
Sbjct: 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 235

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
            L E F+           +      + +       +                    + + 
Sbjct: 236 FLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE-----------------HAPAEMY 278

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKI 147
            +   C    P +R         ++K 
Sbjct: 279 DIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 8e-17
 Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 17/149 (11%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL E  V  + DFG+++ +    D V +      + +MAPE   + + + + DV+S+GV
Sbjct: 165 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 224

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           LL E F+            + + +   + L             ++             + 
Sbjct: 225 LLWEIFSLGASPYP----GVKIDEEFCRRL-------------KEGTRMRAPDYTTPEMY 267

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIKE 149
              LDC    P QR   ++    L  + +
Sbjct: 268 QTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 2e-16
 Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 19/150 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+  +    + DFG+S+ + D          +  I +MAPE  +    ++  DV+ +GV
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGV 197

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
            + E               +   D + +  +GE   +                +C  ++ 
Sbjct: 198 CMWEILMHGVK----PFQGVKNNDVIGRIENGERLPMPP--------------NCPPTLY 239

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIKEK 150
            L   C    P +R   T+  A+L  I E+
Sbjct: 240 SLMTKCWAYDPSRRPRFTELKAQLSTILEE 269

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.7 bits (170), Expect = 1e-15
 Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 18/141 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEY-GSEGIVSTKCDVYSYG 59
           +LLDE     +SDFG++ +    +          T+ Y+APE        +   DV+S G
Sbjct: 134 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 193

Query: 60  VLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119
           ++L      + P D+         DW  K       + ID                 S+ 
Sbjct: 194 IVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID-----------------SAP 236

Query: 120 MHLALDCCMESPDQRIYMTDA 140
           + L     +E+P  RI + D 
Sbjct: 237 LALLHKILVENPSARITIPDI 257

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (166), Expect = 4e-15
 Identities = 33/147 (22%), Positives = 56/147 (38%), Gaps = 18/147 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+ ED V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GV
Sbjct: 166 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 225

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           LL E FT            + + +       G                     +C + + 
Sbjct: 226 LLWEIFTLGGS----PYPGVPVEELFKLLKEGHRMDKPS--------------NCTNELY 267

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKI 147
            +  DC    P QR         L +I
Sbjct: 268 MMMRDCWHAVPSQRPTFKQLVEDLDRI 294

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 3e-14
 Identities = 26/140 (18%), Positives = 43/140 (30%), Gaps = 24/140 (17%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +LL       ++DFG S           +T    T+ Y+ PE     +   K D++S GV
Sbjct: 137 LLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 192

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           L  E    K P +       + ++   +    E T                         
Sbjct: 193 LCYEFLVGKPPFE-----ANTYQETYKRISRVEFT---------------FPDFVTEGAR 232

Query: 121 HLALDCCMESPDQRIYMTDA 140
            L       +P QR  + + 
Sbjct: 233 DLISRLLKHNPSQRPMLREV 252

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 65.8 bits (160), Expect = 5e-14
 Identities = 29/143 (20%), Positives = 45/143 (31%), Gaps = 27/143 (18%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEY---GSEGIVSTKCDVYS 57
           ILL E  +  + DFG + ++            + T  +MAPE      EG    K DV+S
Sbjct: 146 ILLSEPGLVKLGDFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWS 199

Query: 58  YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLS 117
            G+  +E   RK P   M                         ++A++E           
Sbjct: 200 LGITCIELAERKPPLFNMNAMSALY------------------HIAQNESPALQSGHWSE 241

Query: 118 SIMHLALDCCMESPDQRIYMTDA 140
              +    C  + P  R      
Sbjct: 242 YFRNFVDSCLQKIPQDRPTSEVL 264

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (158), Expect = 6e-14
 Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 20/155 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL+EDM   ++DFG +K+L            + T  Y++PE  +E       D+++ G 
Sbjct: 139 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGC 198

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           ++ +      P             +   +      ++I       E              
Sbjct: 199 IIYQLVAGLPP-------------FRAGNEYLIFQKIIKLEYDFPE-------KFFPKAR 238

Query: 121 HLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDV 155
            L     +    +R+   +           F + V
Sbjct: 239 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (158), Expect = 7e-14
 Identities = 27/140 (19%), Positives = 52/140 (37%), Gaps = 19/140 (13%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILL  D    ++DFG    +        ++  + T  +MAPE  +      K D++S G+
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIM 120
           + +E    + P    ++ E  LR     + +G         L+   + F  +        
Sbjct: 205 MAIEMIEGEPP----YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC------- 253

Query: 121 HLALDCCMESPDQRIYMTDA 140
            L +D      ++R    + 
Sbjct: 254 -LDMD-----VEKRGSAKEL 267

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 2e-13
 Identities = 25/145 (17%), Positives = 44/145 (30%), Gaps = 24/145 (16%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEY-----GSEGIVSTKCDV 55
           IL   D    ++DFG+S             +      +MAPE        +     K DV
Sbjct: 141 ILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGT--PYWMAPEVVMCETSKDRPYDYKADV 198

Query: 56  YSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDC 115
           +S G+ L+E    + P  E+                    +V+      +  +       
Sbjct: 199 WSLGITLIEMAEIEPPHHEL-----------------NPMRVLLKIAKSEPPTLAQPSRW 241

Query: 116 LSSIMHLALDCCMESPDQRIYMTDA 140
            S+       C  ++ D R   +  
Sbjct: 242 SSNFKDFLKKCLEKNVDARWTTSQL 266

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 1e-12
 Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLD+D    ++DFG+ K    GD          T  Y+APE       +   D +S+GV
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGV 191

Query: 61  LLMETFTRKKP-----TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
           LL E    + P      +E+F        +  + L  E   ++     R+
Sbjct: 192 LLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVRE 241

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.5 bits (146), Expect = 3e-12
 Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 10/110 (9%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ILLD++    ++DFG +K + D   ++  T       Y+APE  S    +   D +S+G+
Sbjct: 135 ILLDKNGHIKITDFGFAKYVPDVTYTLCGT-----PDYIAPEVVSTKPYNKSIDWWSFGI 189

Query: 61  LLMETFTRKKP-----TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
           L+ E      P     T + +   ++         + ++  ++   + RD
Sbjct: 190 LIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRD 239

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 59.4 bits (143), Expect = 7e-12
 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 10/115 (8%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-TIGYMAPEYGSEGIVSTKCDVYSYG 59
           I++       V DFGI++ + D  +SVTQT  +  T  Y++PE      V  + DVYS G
Sbjct: 142 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 201

Query: 60  VLLMETFTRKKPTDEMFIGEMSLR---------DWVNKSLSGELTQVIDANLARD 105
            +L E  T + P        ++ +            ++ LS +L  V+   LA++
Sbjct: 202 CVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN 256

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 58.5 bits (141), Expect = 2e-11
 Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 12/114 (10%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
                     + DFG++  L   D   +  +T  T  + APE      V    D++S GV
Sbjct: 157 FTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 213

Query: 61  LLMETFTRKKP---------TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
           L     +   P            +   + ++ D     +S +    I   L  D
Sbjct: 214 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLAD 267

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.7 bits (139), Expect = 3e-11
 Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 14/116 (12%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSY 58
           I+      + +   +FG ++ L  GD      +      Y APE     +VST  D++S 
Sbjct: 133 IIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSL 189

Query: 59  GVLLMETFTRKKP---------TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
           G L+    +   P          + +   E +  +   K +S E    +D  L ++
Sbjct: 190 GTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKE 245

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 5e-11
 Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 15/161 (9%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           IL+       ++DFG++++       +  T  + T+ Y APE   +   +T  D++S G 
Sbjct: 147 ILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGC 203

Query: 61  LLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKM---DCLS 117
           +  E F RK         +   +      L GE     D  L R              ++
Sbjct: 204 IFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVT 263

Query: 118 SIMHLALD----CCMESPDQRIYMTDAAA-----KLKKIKE 149
            I  L  D    C   +P +RI    A +      L++ KE
Sbjct: 264 DIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKE 304

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 7e-11
 Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 13/110 (11%)

Query: 1   ILLDED-MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEY-GSEGIVSTKCDVYSY 58
           IL+D +     + DFG   LL D       T    T  Y  PE+            V+S 
Sbjct: 141 ILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196

Query: 59  GVLLMETFTRKKP---TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
           G+LL +      P    +E+  G++  R  V    S E   +I   LA  
Sbjct: 197 GILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----SSECQHLIRWCLALR 242

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 56.7 bits (136), Expect = 9e-11
 Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 13/114 (11%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI-VSTKCDVYSYG 59
           ILLDE     +SD G++              ++ T GYMAPE   +G+   +  D +S G
Sbjct: 138 ILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG 193

Query: 60  VLLMETFTRKKPTD--------EMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
            +L +      P          E+    +++   +  S S EL  +++  L RD
Sbjct: 194 CMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRD 247

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.8 bits (134), Expect = 1e-10
 Identities = 27/114 (23%), Positives = 42/114 (36%), Gaps = 12/114 (10%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
             LDED    +SDFG+SK+   G      +    T GY+APE  ++   S   D +S GV
Sbjct: 141 YSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 197

Query: 61  LLMETFTRKKPT---------DEMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
           +         P          +++   E          +S      I   + +D
Sbjct: 198 IAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKD 251

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.0 bits (134), Expect = 1e-10
 Identities = 21/158 (13%), Positives = 45/158 (28%), Gaps = 19/158 (12%)

Query: 4   DEDMVAHVSDFGISKLLGDGDDSVTQTMTMA-----TIGYMAPEYGSEGIVSTKCDVYSY 58
            +  + ++ DFG++K   D                 T  Y +         S + D+ S 
Sbjct: 140 KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESL 199

Query: 59  GVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSS 118
           G +LM       P   +     + R    +    +++  I+           +     S 
Sbjct: 200 GYVLMYFNLGSLPWQGLK--AATKRQKYERISEKKMSTPIEV----------LCKGYPSE 247

Query: 119 IMHLALDCCMESPDQRIYMTDAAAKLKKI--KEKFLDD 154
                  C     D +   +      + +  ++ F  D
Sbjct: 248 FATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD 285

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 2e-10
 Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 16/118 (13%)

Query: 1   ILLDEDMVA----HVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVY 56
           I+L +  V      + DFG++  +  G++         T  ++APE  +   +  + D++
Sbjct: 144 IMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMW 200

Query: 57  SYGVLLMETFTRKKPTD---------EMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
           S GV+     +   P            +        D    + S      I   L +D
Sbjct: 201 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 258

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 55.1 bits (132), Expect = 3e-10
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 14/116 (12%)

Query: 1   ILLDEDMVAHV--SDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSY 58
           I+ +    + V   DFG++  L   +      +T AT  + APE      V    D+++ 
Sbjct: 158 IMCETKKASSVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAI 214

Query: 59  GVLLMETFTRKKP---------TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
           GVL     +   P            +   +    +    S+S E    I   L ++
Sbjct: 215 GVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKE 270

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 54.4 bits (130), Expect = 4e-10
 Identities = 18/166 (10%), Positives = 39/166 (23%), Gaps = 24/166 (14%)

Query: 1   ILLDEDMVAH-----VSDFGISKLLGDGDDSVTQTMTMA-----TIGYMAPEYGSEGIVS 50
            L+      +     V DFG+ K   D                 T  YM+         S
Sbjct: 132 FLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQS 191

Query: 51  TKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFF 110
            + D+ + G + M              G +  +     +   +  ++ +   +   +   
Sbjct: 192 RRDDLEALGHVFM----------YFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELC 241

Query: 111 VKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI--KEKFLDD 154
                              + D             K+  +    +D
Sbjct: 242 --AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTED 285

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 6e-10
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 15/155 (9%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT--MATIGYMAPE-YGSEGIVSTKCDVYS 57
           +L+  D V  ++DFG+++      +S     T  + T+ Y  PE    E       D++ 
Sbjct: 148 VLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWG 207

Query: 58  YGVLLMETFTRKKPTDEM-----------FIGEMSLRDWVNKSLSGELTQVIDANLARDE 106
            G ++ E +TR                    G ++   W N        ++      + +
Sbjct: 208 AGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK 267

Query: 107 QSFFVKMDCLSSIMHLALDCCME-SPDQRIYMTDA 140
               +K           +D  +   P QRI   DA
Sbjct: 268 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 1e-09
 Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 16/152 (10%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE-YGSEGIVSTKCDVYSYG 59
           +L++ +    ++DFG+++  G    + T  +    + Y APE        ST  D++S G
Sbjct: 133 LLINTEGAIKLADFGLARAFGVPVRTYTHEVVT--LWYRAPEILLGCKYYSTAVDIWSLG 190

Query: 60  VLLMETFTRKKP------TDEMF-----IGEMSLRDWVNKSLSGELTQVIDANLARDEQS 108
            +  E  TR+         D++F     +G      W   +   +          +D   
Sbjct: 191 CIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSK 250

Query: 109 FFVKMDCLSSIMHLALDCCMESPDQRIYMTDA 140
               +D       L        P++RI    A
Sbjct: 251 VVPPLD--EDGRSLLSQMLHYDPNKRISAKAA 280

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 53.4 bits (127), Expect = 1e-09
 Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 16/152 (10%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE-YGSEGIVSTKCDVYSYG 59
           +L++ +    ++DFG+++  G      T  +    + Y AP+        ST  D++S G
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEIVT--LWYRAPDVLMGSKKYSTTIDIWSVG 188

Query: 60  VLLMETFTRKKPTDEM-----------FIGEMSLRDWVNKSLSGELTQVIDANLARDEQS 108
            +  E          +            +G  + ++W N +   +             +S
Sbjct: 189 CIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWES 248

Query: 109 FFVKMDCLSSIMHLALDCCMESPDQRIYMTDA 140
           F   +D   S + L        P+QRI    A
Sbjct: 249 FLKGLD--ESGIDLLSKMLKLDPNQRITAKQA 278

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 52.8 bits (126), Expect = 1e-09
 Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 12/117 (10%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT---MATIGYMAPEYGSEGIVSTKCDVYS 57
           ILLD+DM   ++DFG S  L  G+       T   +A          +      + D++S
Sbjct: 141 ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 200

Query: 58  YGVLLMETFTRKKPTDE---------MFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
            GV++        P            +  G            S  +  ++   L   
Sbjct: 201 TGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQ 257

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 2e-09
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE-YGSEGIVSTKCDVYSYG 59
           +LLDE+ V  ++DFG++K  G  +     T  + T  Y APE      +     D+++ G
Sbjct: 131 LLLDENGVLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVG 188

Query: 60  VLLMETFTRKKP 71
            +L E   R   
Sbjct: 189 CILAELLLRVPF 200

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 7e-09
 Identities = 27/153 (17%), Positives = 49/153 (32%), Gaps = 13/153 (8%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT-MATIGYMAPEYGSEGIVST-KCDVYSY 58
           +LL+      + DFG++++     D        +AT  Y APE        T   D++S 
Sbjct: 140 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 199

Query: 59  GVLLMETFTRKKPTDEM-----------FIGEMSLRDWVNKSLSGELTQVIDANLARDEQ 107
           G +L E  + +                  +G  S  D            ++         
Sbjct: 200 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP 259

Query: 108 SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDA 140
              +  +  S  + L       +P +RI +  A
Sbjct: 260 WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 1e-08
 Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           ++LD+D    ++DFG+ K         T      T  Y+APE   +       D +  GV
Sbjct: 136 LMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193

Query: 61  LLMETFTRKKP---TDEMFIGEMSLRDWVN--KSLSGELTQVIDANLARD 105
           ++ E    + P    D   + E+ L + +   ++LS E   ++   L +D
Sbjct: 194 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKD 243

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 2e-08
 Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 19/121 (15%)

Query: 1   ILLD---EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYS 57
           +L      + +  ++DFG +K     +   + T    T  Y+APE          CD++S
Sbjct: 142 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 198

Query: 58  YGVLLMETFTRKKPTDEMF-------------IGEMSLRDWVNKSLSGELTQVIDANLAR 104
            GV++        P                  +G+    +     +S E+  +I   L  
Sbjct: 199 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 258

Query: 105 D 105
           +
Sbjct: 259 E 259

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 6e-08
 Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 12/116 (10%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPE--YGSEGIVSTKCDVYSY 58
           ILLD +    ++DFG+SK     +          TI YMAP+   G +       D +S 
Sbjct: 160 ILLDSNGHVVLTDFGLSKEFVADETERAYDF-CGTIEYMAPDIVRGGDSGHDKAVDWWSL 218

Query: 59  GVLLMETFTRKKP---------TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
           GVL+ E  T   P           E+    +       + +S     +I   L +D
Sbjct: 219 GVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKD 274

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 10/110 (9%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L+D+     V+DFG +K +              T   +APE       +   D ++ GV
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEALAPEIILSKGYNKAVDWWALGV 226

Query: 61  LLMETFTRKKP-----TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARD 105
           L+ E      P       +++   +S +       S +L  ++   L  D
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 1e-06
 Identities = 20/149 (13%), Positives = 45/149 (30%), Gaps = 11/149 (7%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           +L  +  V  + DFG +K L  G+     +   +               ++  DV+S G 
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 211

Query: 61  LLMETFTRKKP---------TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV 111
           +L E    +             E+     +      + ++   T+     +     +   
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVF 271

Query: 112 KMDCLSSIMHLALDCCMESPDQRIYMTDA 140
           +       + L       +P  R+   +A
Sbjct: 272 RPRTPPEAIALCSRLLEYTPTARLTPLEA 300

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.1 bits (100), Expect = 4e-06
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 1/72 (1%)

Query: 1   ILLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 59
           +L++  D   ++    I+ L          T ++ T  Y +PE           D++S  
Sbjct: 157 VLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTA 216

Query: 60  VLLMETFTRKKP 71
            L+ E  T    
Sbjct: 217 CLIFELITGDFL 228

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 6e-05
 Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 19/153 (12%)

Query: 1   ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 60
           + ++ED    + DFG+++      D                   +    +   D++S G 
Sbjct: 152 LAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207

Query: 61  LLMETFTRKKP---TDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKM---- 113
           ++ E  T +     TD +   ++ LR  +  +   EL + I +  AR+      +M    
Sbjct: 208 IMAELLTGRTLFPGTDHIDQLKLILR--LVGTPGAELLKKISSESARNYIQSLTQMPKMN 265

Query: 114 --DCLSSIMHLALD----CCMESPDQRIYMTDA 140
             +       LA+D      +   D+RI    A
Sbjct: 266 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 1e-04
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 3   LDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLL 62
           +  D    + DFG+++  G        T  + T  Y APE           D++S G ++
Sbjct: 152 VKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 208

Query: 63  METFTRKKP 71
            E    K  
Sbjct: 209 GEMVRHKIL 217

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	159
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.96
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.96
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.96
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.96
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.96
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.96
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.95
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.95
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.95
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.95
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.95
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.95
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.95
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.95
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.94
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.94
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.94
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.94
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.94
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.94
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.94
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.94
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.94
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.94
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.94
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.94
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.93
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.93
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.93
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.93
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.92
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.92
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.92
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.92
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.92
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.92
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.92
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.91
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.91
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.91
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.91
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.91
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.91
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.9
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.9
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.9
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.89
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.89
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.88
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.88
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.88
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.88
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.87
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.87
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.86
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.85
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.85
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.81
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.81
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	89.33

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5e-32  Score=179.25  Aligned_cols=137  Identities=22%  Similarity=0.349  Sum_probs=94.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC---ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.++.+||+|||+|+...........+...||+.|+|||++.+.   .++.++||||||+++||+++|+.||.....
T Consensus       135 iLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~  214 (276)
T d1uwha_         135 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN  214 (276)
T ss_dssp             EEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred             EEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCCh
Confidence            58899999999999999876543333344556799999999987643   478899999999999999999999975432


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      .. ............       +      .....+..++..+.+++.+||+.||++|||+.+|++.|+.+.+.+
T Consensus       215 ~~-~~~~~~~~~~~~-------p------~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~  274 (276)
T d1uwha_         215 RD-QIIFMVGRGYLS-------P------DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL  274 (276)
T ss_dssp             HH-HHHHHHHHTSCC-------C------CGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             HH-HHHHHHhcCCCC-------C------cchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcC
Confidence            11 111111111100       0      001112245678999999999999999999999999999988754

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.1e-30  Score=173.45  Aligned_cols=132  Identities=24%  Similarity=0.355  Sum_probs=93.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcC-CCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRK-KPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~-~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+|+...........+...||+.|+|||++.+..++.++||||||+++|||+++. .||...... 
T Consensus       165 ILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~-  243 (299)
T d1ywna1         165 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-  243 (299)
T ss_dssp             EEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-
T ss_pred             eeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH-
Confidence            688999999999999998765444444445567999999999999888999999999999999999864 567543221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      ..+...+......                 ..+...++.+.+++.+||+.||++|||+.|+++.|+++++.
T Consensus       244 ~~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         244 EEFCRRLKEGTRM-----------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             HHHHHHHHHTCCC-----------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCC-----------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            1111212111110                 11123456789999999999999999999999999998764

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.3e-30  Score=171.25  Aligned_cols=150  Identities=17%  Similarity=0.249  Sum_probs=98.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc--cccccccccccccccccCCC------ccccchhhHhHHHHHHHHHhcCCCC
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV--TQTMTMATIGYMAPEYGSEG------IVSTKCDVYSYGVLLMETFTRKKPT   72 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~~~~pe~~~~~------~~~~~~dv~s~g~~~~~~~~~~~p~   72 (159)
                      ||++.++.+||+|||+++.........  ......||+.|+|||++.+.      .++.++||||||+++||+++|..||
T Consensus       139 ILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~  218 (303)
T d1vjya_         139 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             EEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred             eEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCC
Confidence            689999999999999998765433221  23346799999999987653      3677899999999999999998876


Q ss_pred             cccccccccHHHHHHhhcC--CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           73 DEMFIGEMSLRDWVNKSLS--GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      ...................  ............+..............+.+++.+||+.||.+|||+.||++.|+++.++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         219 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             TBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence            5422211110000000000  00001111222222223333446677899999999999999999999999999998865

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-29  Score=167.04  Aligned_cols=130  Identities=25%  Similarity=0.376  Sum_probs=85.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcC-CCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRK-KPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~-~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++........ ......||+.|+|||++.+..++.++||||||+++||++++. +||....  .
T Consensus       132 ill~~~~~~Kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~--~  208 (263)
T d1sm2a_         132 CLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--N  208 (263)
T ss_dssp             EEECGGGCEEECSCC-------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC--H
T ss_pred             eeecCCCCeEecccchheeccCCCce-eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC--H
Confidence            68899999999999999876433222 223356899999999999989999999999999999999854 4443211  1


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      ......+......                 ..+..+++.+.+++.+||+.||++|||+++|++.|++|++.
T Consensus       209 ~~~~~~i~~~~~~-----------------~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         209 SEVVEDISTGFRL-----------------YKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             HHHHHHHHHTCCC-----------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCC-----------------CCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence            1111111111100                 01123456789999999999999999999999999999763

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.2e-29  Score=167.22  Aligned_cols=133  Identities=26%  Similarity=0.409  Sum_probs=89.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++........ .......||+.|+|||++.+..++.++||||||+++||++++..|+..... .
T Consensus       141 ILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~-~  219 (283)
T d1mqba_         141 ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-N  219 (283)
T ss_dssp             EEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-H
T ss_pred             EEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCC-H
Confidence            68999999999999999876433222 223335688999999999888999999999999999999997665433211 1


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      ......+....            .     .+.+..++..+.+++.+||+.||++|||+.||++.|+++.+.-
T Consensus       220 ~~~~~~i~~~~------------~-----~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p  274 (283)
T d1mqba_         220 HEVMKAINDGF------------R-----LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP  274 (283)
T ss_dssp             HHHHHHHHTTC------------C-----CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             HHHHHHHhccC------------C-----CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCc
Confidence            11111111110            0     0112245667899999999999999999999999999988753

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.1e-30  Score=173.71  Aligned_cols=128  Identities=22%  Similarity=0.355  Sum_probs=96.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+|+...........+...||+.|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus       195 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~  274 (325)
T d1rjba_         195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA  274 (325)
T ss_dssp             EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             cccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH
Confidence            5788999999999999987655444444455678999999999988899999999999999999997 899987533211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                       .+...+....            .     ...+..++..+.+++.+||+.||++|||++||++.|..
T Consensus       275 -~~~~~~~~~~------------~-----~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         275 -NFYKLIQNGF------------K-----MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             -HHHHHHHTTC------------C-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -HHHHHHhcCC------------C-----CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence             1111111111            0     01123456689999999999999999999999998853

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=2.5e-29  Score=168.01  Aligned_cols=131  Identities=26%  Similarity=0.440  Sum_probs=87.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc---cccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV---TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~   76 (159)
                      ||++.++.+||+|||+++.........   ......||+.|+|||++.+..++.++|||||||++||+++ |..||....
T Consensus       159 ILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~  238 (299)
T d1jpaa_         159 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT  238 (299)
T ss_dssp             EEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             EEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCC
Confidence            688999999999999998765332221   1122457889999999988889999999999999999997 899986532


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      ..  .....+....            .     .+.+.+++..+.+++.+||+.||++|||+.||++.|+++++.
T Consensus       239 ~~--~~~~~i~~~~------------~-----~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         239 NQ--DVINAIEQDY------------R-----LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             HH--HHHHHHHTTC------------C-----CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HH--HHHHHHHcCC------------C-----CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            21  1111111110            0     011235567889999999999999999999999999998764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.9e-29  Score=165.93  Aligned_cols=136  Identities=24%  Similarity=0.366  Sum_probs=101.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||+++.+...... .......||+.|+|||++.+..++.++||||||+++||+++ |..||..... 
T Consensus       140 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~-  218 (285)
T d1u59a_         140 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-  218 (285)
T ss_dssp             EEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-
T ss_pred             eeeccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCH-
Confidence            57889999999999999987543322 22334568899999999988899999999999999999997 8999975432 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhh
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDV  155 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~~  155 (159)
                       ......+.....                 ...+..++..+.+++.+||+.||++|||+.+|++.|+.+...+.++.
T Consensus       219 -~~~~~~i~~~~~-----------------~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~~~~  277 (285)
T d1u59a_         219 -PEVMAFIEQGKR-----------------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV  277 (285)
T ss_dssp             -HHHHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred             -HHHHHHHHcCCC-----------------CCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhhhcc
Confidence             112222211110                 01123456788999999999999999999999999998877665544

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=5.9e-30  Score=171.35  Aligned_cols=129  Identities=24%  Similarity=0.350  Sum_probs=94.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcC-CCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRK-KPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~-~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+|+...........+...|++.|+|||.+.+..++.++||||||+++||++++. .||.....  
T Consensus       171 ILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~--  248 (301)
T d1lufa_         171 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH--  248 (301)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--
T ss_pred             eEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCH--
Confidence            688999999999999998765443333444567889999999999889999999999999999999986 56654321  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK  148 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~  148 (159)
                      ......+....           .      ...+..++..+.+++.+||+.||++|||+.||++.|++|.
T Consensus       249 ~e~~~~v~~~~-----------~------~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         249 EEVIYYVRDGN-----------I------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHHHTTC-----------C------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHcCC-----------C------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            11111111110           0      0112345667899999999999999999999999999875

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.7e-29  Score=165.60  Aligned_cols=125  Identities=24%  Similarity=0.301  Sum_probs=90.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+|+...........+..+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.......
T Consensus       134 ILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~  213 (271)
T d1nvra_         134 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC  213 (271)
T ss_dssp             EEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTS
T ss_pred             EEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHH
Confidence            6889999999999999988654333333455679999999999887765 678999999999999999999997543222


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ............            .     ......+..+.+++.+||+.||++|||+.|+++
T Consensus       214 ~~~~~~~~~~~~------------~-----~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         214 QEYSDWKEKKTY------------L-----NPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHHHHHTTCTT------------S-----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHhcCCCC------------C-----CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            222111111000            0     001133456788999999999999999999874

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.9e-29  Score=164.24  Aligned_cols=134  Identities=25%  Similarity=0.336  Sum_probs=97.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||+++.+...... .......||+.|+|||.+.+..++.++||||||+++||+++ |..||......
T Consensus       138 ill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~  217 (277)
T d1xbba_         138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS  217 (277)
T ss_dssp             EEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             hcccccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH
Confidence            57889999999999999876543322 22233568999999999988899999999999999999997 89998753221


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD  153 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~  153 (159)
                        .....+....                 ....+..++..+.+++.+||+.||++|||+.+|+..|+..-.+...
T Consensus       218 --~~~~~i~~~~-----------------~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~  273 (277)
T d1xbba_         218 --EVTAMLEKGE-----------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN  273 (277)
T ss_dssp             --HHHHHHHTTC-----------------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHcCC-----------------CCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhhcCC
Confidence              1111121110                 0011234567889999999999999999999999998887665544

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7e-29  Score=164.05  Aligned_cols=130  Identities=22%  Similarity=0.355  Sum_probs=87.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      |+++.++.+||+|||+++....... ...+...||+.|+|||++.+..++.++||||||+++|||++ |..||...... 
T Consensus       139 Ill~~~~~~Kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~-  216 (273)
T d1mp8a_         139 VLVSSNDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-  216 (273)
T ss_dssp             EEEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-
T ss_pred             eeecCCCcEEEccchhheeccCCcc-eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH-
Confidence            5788899999999999987643322 22334568899999999988889999999999999999987 78888654321 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       .....+.....                 .+.+..++..+.+++.+||..||++|||+.||++.|++++++
T Consensus       217 -~~~~~i~~~~~-----------------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  269 (273)
T d1mp8a_         217 -DVIGRIENGER-----------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  269 (273)
T ss_dssp             -GHHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHcCCC-----------------CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence             11111111100                 011234567899999999999999999999999999998766

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.7e-29  Score=166.94  Aligned_cols=131  Identities=24%  Similarity=0.367  Sum_probs=95.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++||+++ |..||...... 
T Consensus       142 Ill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~-  220 (317)
T d1xkka_         142 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-  220 (317)
T ss_dssp             EEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGG-
T ss_pred             ceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHH-
Confidence            5788999999999999988754444333444568999999999988899999999999999999998 78888653221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       .....+.....                 .+.+..++..+.+++.+||+.||.+|||+.|+++.|..+.+.
T Consensus       221 -~~~~~i~~~~~-----------------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~  273 (317)
T d1xkka_         221 -EISSILEKGER-----------------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  273 (317)
T ss_dssp             -GHHHHHHHTCC-----------------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             -HHHHHHHcCCC-----------------CCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence             12222211110                 011234566789999999999999999999999999988654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.3e-28  Score=162.64  Aligned_cols=130  Identities=22%  Similarity=0.370  Sum_probs=94.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+|+...... ....+...||+.|+|||++.+..++.++||||||+++||+++|..|+..... ..
T Consensus       140 Ill~~~~~~Kl~DFGla~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~-~~  217 (272)
T d1qpca_         140 ILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-NP  217 (272)
T ss_dssp             EEECTTSCEEECCCTTCEECSSSC-EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-HH
T ss_pred             eeeecccceeeccccceEEccCCc-cccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCC-HH
Confidence            689999999999999999875432 2233445689999999999888899999999999999999997655432211 11


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                      .....+.....                 ...+..++..+.+++.+||+.||++|||+.+|++.|+.+-.
T Consensus       218 ~~~~~i~~~~~-----------------~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         218 EVIQNLERGYR-----------------MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCC-----------------CCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            11111111100                 01122455678999999999999999999999999987654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.4e-29  Score=164.81  Aligned_cols=123  Identities=17%  Similarity=0.176  Sum_probs=90.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+|+.+.....  .....+||+.|+|||++.+..++.++||||+||++|+|++|..||........
T Consensus       147 ILl~~~~~vkl~DFG~a~~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  224 (293)
T d1yhwa1         147 ILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA  224 (293)
T ss_dssp             EEECTTCCEEECCCTTCEECCSTTC--CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             eEECCCCcEeeccchhheeeccccc--cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHH
Confidence            6889999999999999988743222  23446799999999999998999999999999999999999999965321110


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ......... .               ....+...+..+.+++.+||+.||.+|||+.|+++
T Consensus       225 -~~~~~~~~~-~---------------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         225 -LYLIATNGT-P---------------ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             -HHHHHHHCS-C---------------CCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             -HHHHHhCCC-C---------------CCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             111111100 0               00112244567889999999999999999999974

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.8e-28  Score=160.67  Aligned_cols=126  Identities=20%  Similarity=0.354  Sum_probs=94.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++||||||+++||+++ |..||...... 
T Consensus       131 ill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~-  208 (258)
T d1k2pa_         131 CLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-  208 (258)
T ss_dssp             EEECTTCCEEECCCSSCCBCSSSSC-CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-
T ss_pred             EEEcCCCcEEECcchhheeccCCCc-eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH-
Confidence            5789999999999999987654322 23334568999999999988889999999999999999997 78898754321 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK  146 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~  146 (159)
                       .....+.....                 ...+..+++.+.+++.+||+.||++|||+.++++.|.+
T Consensus       209 -~~~~~i~~~~~-----------------~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         209 -ETAEHIAQGLR-----------------LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             -HHHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             -HHHHHHHhCCC-----------------CCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence             11111111100                 01122445678999999999999999999999998854

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-28  Score=162.31  Aligned_cols=121  Identities=18%  Similarity=0.254  Sum_probs=85.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++.+.....  ......||+.|+|||++.+..++.++||||+||++|+|++|..||......  
T Consensus       145 Ill~~~~~vkl~DFG~a~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~--  220 (269)
T d2java1         145 VFLDGKQNVKLGDFGLARILNHDTS--FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--  220 (269)
T ss_dssp             EEECTTSCEEECCHHHHHHC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--
T ss_pred             cCcCCCCcEEEeeccceeecccCCC--ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH--
Confidence            6889999999999999987643222  233467999999999999889999999999999999999999999753211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....+...   .        ...      .+...++.+.+++.+||+.||.+|||+.|+++
T Consensus       221 ~~~~~i~~~---~--------~~~------~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         221 ELAGKIREG---K--------FRR------IPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHHHHT---C--------CCC------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHcC---C--------CCC------CCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            111111111   0        000      11234567889999999999999999999875

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.4e-28  Score=161.74  Aligned_cols=132  Identities=19%  Similarity=0.319  Sum_probs=98.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcC-CCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRK-KPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~-~p~~~~~~~~   79 (159)
                      |+++.++.+|++|||.++...........+...||+.|+|||++.+..++.++||||||+++|+|+++. ++|... ...
T Consensus       176 Il~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~-~~~  254 (311)
T d1t46a_         176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PVD  254 (311)
T ss_dssp             EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-CSS
T ss_pred             ccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCC-CHH
Confidence            578899999999999999876555555555678999999999998888999999999999999999854 444332 222


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      ..+...+....            ...     .+...+..+.+++.+||+.||.+|||+.+|++.|+++.++
T Consensus       255 ~~~~~~i~~~~------------~~~-----~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         255 SKFYKMIKEGF------------RML-----SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHHHHHHHHTC------------CCC-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCC------------CCC-----CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            22222222111            111     1123456789999999999999999999999999887665

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1.2e-28  Score=163.78  Aligned_cols=130  Identities=22%  Similarity=0.285  Sum_probs=94.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++...... ........|++.|+|||++.+..++.++||||||+++|+++++..|+...... .
T Consensus       146 ILl~~~~~~Kl~DFG~a~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~-~  223 (287)
T d1opja_         146 CLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-S  223 (287)
T ss_dssp             EEECGGGCEEECCCCCTTTCCSSS-SEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH-H
T ss_pred             EEECCCCcEEEccccceeecCCCC-ceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH-H
Confidence            688999999999999998764332 22334456888999999998889999999999999999999977665322111 1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                      .....+...            ...     ..+..++..+.+++.+||+.||.+|||+.+|++.|+.+.+
T Consensus       224 ~~~~~i~~~------------~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         224 QVYELLEKD------------YRM-----ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             HHHHHHHTT------------CCC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             HHHHHHhcC------------CCC-----CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            111111111            100     1122455678999999999999999999999999987643

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.2e-28  Score=161.65  Aligned_cols=136  Identities=23%  Similarity=0.374  Sum_probs=98.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCc--ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS--VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||+++++.+||+|||+++........  .......||+.|+|||.+.+..++.++||||||++++|++++..||......
T Consensus       161 ILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~  240 (311)
T d1r0pa_         161 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT  240 (311)
T ss_dssp             EEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----
T ss_pred             EeECCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH
Confidence            68899999999999999876433222  1223356889999999998888999999999999999999988876542211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhh
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD  154 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~  154 (159)
                       ......+.....                 ...+..++..+.+++.+||+.||.+|||+.||++.|+++++.+..+
T Consensus       241 -~~~~~~i~~g~~-----------------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~~  298 (311)
T d1r0pa_         241 -FDITVYLLQGRR-----------------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE  298 (311)
T ss_dssp             ---CHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred             -HHHHHHHHcCCC-----------------CCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhhh
Confidence             111111111110                 0112244567899999999999999999999999999999886654

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-28  Score=163.48  Aligned_cols=123  Identities=21%  Similarity=0.212  Sum_probs=88.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM   75 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~   75 (159)
                      ||++.++.+||+|||+|+....  .........||+.|+|||++.     ...|+.++||||+||++|+|++|..||...
T Consensus       141 Ill~~~~~~Kl~DFG~a~~~~~--~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~  218 (288)
T d2jfla1         141 ILFTLDGDIKLADFGVSAKNTR--TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL  218 (288)
T ss_dssp             EEECTTSCEEECCCTTCEECHH--HHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             eeECCCCCEEEEechhhhccCC--CcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCC
Confidence            6889999999999999976532  111233467999999999873     446789999999999999999999999753


Q ss_pred             ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ....  ....+..               ..+.....+...+..+.+++.+||+.||.+|||+.|+++
T Consensus       219 ~~~~--~~~~i~~---------------~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         219 NPMR--VLLKIAK---------------SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             CGGG--HHHHHHH---------------SCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CHHH--HHHHHHc---------------CCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            2211  1111111               111111112345567899999999999999999999975

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.1e-28  Score=159.90  Aligned_cols=118  Identities=21%  Similarity=0.242  Sum_probs=88.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+|+......    .....||+.|+|||++.+..++.++|+||+||++|+|++|+.||.....   
T Consensus       137 ill~~~~~~kl~DFG~a~~~~~~~----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---  209 (263)
T d2j4za1         137 LLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY---  209 (263)
T ss_dssp             EEECTTSCEEECCCCSCSCCCCCC----CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH---
T ss_pred             ceecCCCCEeecccceeeecCCCc----ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH---
Confidence            688999999999999997764322    2335799999999999998899999999999999999999999965321   


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ............               ..+...++.+.+++.+||+.||++|||+.|+++
T Consensus       210 --~~~~~~i~~~~~---------------~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         210 --QETYKRISRVEF---------------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             --HHHHHHHHTTCC---------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --HHHHHHHHcCCC---------------CCCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence              111111100000               001134557889999999999999999999985

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-28  Score=162.38  Aligned_cols=129  Identities=22%  Similarity=0.336  Sum_probs=92.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||+++......... ......|+..|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus       142 Ill~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~  221 (273)
T d1u46a_         142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS  221 (273)
T ss_dssp             EEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             hccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH
Confidence            578889999999999999875443322 2233457788999999999899999999999999999997 89998753211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI  147 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~  147 (159)
                        .....+..   ...             ..+.+..++..+.+++.+||+.||++|||+.+|++.|++.
T Consensus       222 --~~~~~i~~---~~~-------------~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         222 --QILHKIDK---EGE-------------RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             --HHHHHHHT---SCC-------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --HHHHHHHh---CCC-------------CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence              11111111   100             0011224556789999999999999999999999888775

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.9e-28  Score=158.51  Aligned_cols=120  Identities=20%  Similarity=0.312  Sum_probs=85.1

Q ss_pred             CccC-CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++ .++.+||+|||+++.....    .....+||+.|+|||++.+ +++.++||||+||++|+|++|+.||.......
T Consensus       145 ILl~~~~~~~Kl~DFGla~~~~~~----~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~  219 (270)
T d1t4ha_         145 IFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA  219 (270)
T ss_dssp             EEESSTTSCEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH
T ss_pred             ceeeCCCCCEEEeecCcceeccCC----ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHH
Confidence            5775 5789999999999764321    2234679999999998865 68999999999999999999999996432211


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                          .............             ..+....+.+.+++.+||+.||++|||+.|+++
T Consensus       220 ----~~~~~i~~~~~~~-------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         220 ----QIYRRVTSGVKPA-------------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             ----HHHHHHTTTCCCG-------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----HHHHHHHcCCCCc-------------ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence                1111111110000             001123456889999999999999999999975

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-27  Score=159.59  Aligned_cols=131  Identities=26%  Similarity=0.378  Sum_probs=97.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............|++.|+|||.+.+..++.++||||||+++|++++ |..||...... 
T Consensus       166 iLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~-  244 (299)
T d1fgka_         166 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-  244 (299)
T ss_dssp             EEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred             eeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH-
Confidence            5889999999999999987754443333444668999999999988899999999999999999997 67887643221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       .....+......                 ..+...+..+.+++.+||+.||++|||+.||++.|++|...
T Consensus       245 -~~~~~i~~~~~~-----------------~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~  297 (299)
T d1fgka_         245 -ELFKLLKEGHRM-----------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  297 (299)
T ss_dssp             -HHHHHHHTTCCC-----------------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHcCCCC-----------------CCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhhc
Confidence             111111111100                 11123456789999999999999999999999999998653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.8e-28  Score=162.85  Aligned_cols=122  Identities=19%  Similarity=0.257  Sum_probs=86.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+|+.+............+||+.|+|||++.+..++.++||||+||++|+|++|..||.....  .
T Consensus       139 Ill~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--~  216 (288)
T d1uu3a_         139 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--Y  216 (288)
T ss_dssp             EEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--H
T ss_pred             cccCCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH--H
Confidence            58899999999999999887544333334456799999999999998999999999999999999999999975321  1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....+..   ...        .       .+...++.+.+++.+||+.||.+|||++|++.
T Consensus       217 ~~~~~i~~---~~~--------~-------~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         217 LIFQKIIK---LEY--------D-------FPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             HHHHHHHT---TCC--------C-------CCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             HHHHHHHc---CCC--------C-------CCccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            11111110   000        0       01133456889999999999999999998764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.2e-27  Score=154.96  Aligned_cols=126  Identities=28%  Similarity=0.399  Sum_probs=88.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~   79 (159)
                      ||++.++.+|++|||+++.....     .....+++.|+|||++.+..++.++||||||+++||+++ |..||...... 
T Consensus       134 il~~~~~~~kl~dfg~s~~~~~~-----~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~-  207 (262)
T d1byga_         134 VLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-  207 (262)
T ss_dssp             EEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-
T ss_pred             heecCCCCEeecccccceecCCC-----CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH-
Confidence            57899999999999999875322     222457889999999988889999999999999999998 67777653221 


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                       .....+......                 +.+...++.+.+++.+||+.||.+|||+.++++.|++++..
T Consensus       208 -~~~~~i~~~~~~-----------------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         208 -DVVPRVEKGYKM-----------------DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             -GHHHHHTTTCCC-----------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHcCCCC-----------------CCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence             222222111100                 11223456788999999999999999999999999998754

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.6e-28  Score=161.19  Aligned_cols=133  Identities=22%  Similarity=0.351  Sum_probs=97.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcC-CCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRK-KPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~-~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++...............||+.|+|||.+.+..++.++|+||||++++||+++. .||....   
T Consensus       164 iLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~---  240 (308)
T d1p4oa_         164 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS---  240 (308)
T ss_dssp             EEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC---
T ss_pred             eeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCC---
Confidence            689999999999999998765444444444557899999999999888999999999999999999985 6665421   


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL  152 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~  152 (159)
                        ..+.........        .      ...+..++..+.+++.+||+.||++|||+.+|++.|++..+...
T Consensus       241 --~~~~~~~i~~~~--------~------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~  297 (308)
T d1p4oa_         241 --NEQVLRFVMEGG--------L------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF  297 (308)
T ss_dssp             --HHHHHHHHHTTC--------C------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTH
T ss_pred             --HHHHHHHHHhCC--------C------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence              111111111110        0      01122455679999999999999999999999999887655443

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.7e-27  Score=157.97  Aligned_cols=131  Identities=26%  Similarity=0.416  Sum_probs=88.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++||+++|..|+..... ..
T Consensus       144 Ill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~-~~  221 (285)
T d1fmka3         144 ILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-NR  221 (285)
T ss_dssp             EEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-HH
T ss_pred             EEECCCCcEEEcccchhhhccCCCc-eeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCC-HH
Confidence            6889999999999999987643322 223345689999999999888999999999999999999997666433221 11


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK  150 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~  150 (159)
                      .....+.....                 .+.+..+++.+.+++.+||+.||++|||+.+|++.|+.....
T Consensus       222 ~~~~~i~~~~~-----------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         222 EVLDQVERGYR-----------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             HHHHHHHTTCC-----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHHHhcCC-----------------CCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            11111111110                 011224566789999999999999999999999888775543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.1e-27  Score=161.54  Aligned_cols=143  Identities=20%  Similarity=0.232  Sum_probs=91.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+|+.+...    ..+..+||+.|+|||++.+.+|+.++||||+||++++|++|+.||........
T Consensus       136 ILl~~~~~vkl~DFGla~~~~~~----~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~  211 (322)
T d1s9ja_         136 ILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL  211 (322)
T ss_dssp             EEECTTCCEEECCCCCCHHHHHH----TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHH
T ss_pred             eeECCCCCEEEeeCCCccccCCC----ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence            68899999999999999875321    12345799999999999999999999999999999999999999965322111


Q ss_pred             cHHHH--HH-----------------------hhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC
Q 035782           81 SLRDW--VN-----------------------KSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI  135 (159)
Q Consensus        81 ~~~~~--~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  135 (159)
                      .....  ..                       ........+..+......+.. .........+.+++.+||..||.+||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~  290 (322)
T d1s9ja_         212 ELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPK-LPSGVFSLEFQDFVNKCLIKNPAERA  290 (322)
T ss_dssp             HHHC------------------------------CCCCHHHHHHHHHTSCCCC-CCBTTBCHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCcc-CccccCCHHHHHHHHHHcCCChhHCc
Confidence            00000  00                       000000000000000000000 00012345788999999999999999


Q ss_pred             cHHHHHH--HHHHHH
Q 035782          136 YMTDAAA--KLKKIK  148 (159)
Q Consensus       136 t~~~ll~--~l~~~~  148 (159)
                      |+.|+++  .+++..
T Consensus       291 ta~e~L~Hpf~~~~~  305 (322)
T d1s9ja_         291 DLKQLMVHAFIKRSD  305 (322)
T ss_dssp             CHHHHHTSHHHHHHH
T ss_pred             CHHHHhhCHhhCcCC
Confidence            9999986  455443

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.6e-27  Score=158.21  Aligned_cols=129  Identities=27%  Similarity=0.373  Sum_probs=92.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcC-CCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRK-KPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~-~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++......   ......||..|+|||.+.+..++.++||||||++++||++|. .||.....  
T Consensus       158 IL~~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~--  232 (309)
T d1fvra_         158 ILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--  232 (309)
T ss_dssp             EEECGGGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--
T ss_pred             EEEcCCCceEEccccccccccccc---cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCH--
Confidence            578899999999999998653222   122345889999999998889999999999999999999976 45644211  


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      ......+....            .     ...+..+++.+.+++.+||+.||++|||+.+|++.|+++.++.
T Consensus       233 ~~~~~~i~~~~------------~-----~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~  287 (309)
T d1fvra_         233 AELYEKLPQGY------------R-----LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  287 (309)
T ss_dssp             HHHHHHGGGTC------------C-----CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHhcC------------C-----CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence            11111111100            0     0112245668999999999999999999999999999998654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=9.1e-27  Score=155.95  Aligned_cols=120  Identities=24%  Similarity=0.234  Sum_probs=76.0

Q ss_pred             CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHH
Q 035782            4 DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLR   83 (159)
Q Consensus         4 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~   83 (159)
                      +.++.+||+|||+++......   .....+||+.|+|||++.+..++.++||||+||++|+|++|..||......  ...
T Consensus       144 ~~~~~vkl~DFG~a~~~~~~~---~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--~~~  218 (307)
T d1a06a_         144 DEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--KLF  218 (307)
T ss_dssp             STTCCEEECCC---------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHH
T ss_pred             CCCceEEEeccceeEEccCCC---eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH--HHH
Confidence            457899999999998764322   223467999999999999989999999999999999999999999653211  111


Q ss_pred             HHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           84 DWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..+....   .        .   ...+.....++.+.+++.+||+.||++|||+.|+++
T Consensus       219 ~~i~~~~---~--------~---~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         219 EQILKAE---Y--------E---FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             HHHHTTC---C--------C---CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHhccC---C--------C---CCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            1111100   0        0   000111234567899999999999999999999986

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=5.5e-27  Score=157.10  Aligned_cols=118  Identities=24%  Similarity=0.250  Sum_probs=85.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC---CccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE---GIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.++.+||+|||+++....      .....||+.|+|||++.+   ..|+.++||||+||++|++++|..||.....
T Consensus       146 ILl~~~~~~Kl~DFG~a~~~~~------~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~  219 (309)
T d1u5ra_         146 ILLSEPGLVKLGDFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA  219 (309)
T ss_dssp             EEEETTTEEEECCCTTCBSSSS------BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             EEECCCCCEEEeecccccccCC------CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH
Confidence            6889999999999999986532      123569999999998754   3588999999999999999999999865321


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  .....+.....   ..             ..+...++.+.+++.+||+.||.+|||+.|+++
T Consensus       220 ~--~~~~~i~~~~~---~~-------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         220 M--SALYHIAQNES---PA-------------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             H--HHHHHHHHSCC---CC-------------CSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             H--HHHHHHHhCCC---CC-------------CCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            1  11111111000   00             001134567889999999999999999999975

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.7e-26  Score=153.69  Aligned_cols=120  Identities=20%  Similarity=0.210  Sum_probs=88.9

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+|+.......  .....+||+.|+|||++.+..|+.++|+||+||++|+|++|..||......  
T Consensus       136 ILl~~~g~vkl~DFG~a~~~~~~~~--~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~--  211 (337)
T d1o6la_         136 LMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--  211 (337)
T ss_dssp             EEECTTSCEEECCCTTCBCSCCTTC--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred             eEecCCCCEEEeecccccccccCCc--ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH--
Confidence            6889999999999999987543222  234467999999999999999999999999999999999999998753221  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll~  142 (159)
                      .....+.....            .      .+...++.+.+++.+||+.||.+|++     ++|+++
T Consensus       212 ~~~~~i~~~~~------------~------~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         212 RLFELILMEEI------------R------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHHHCCC------------C------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHHhcCCC------------C------CCccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            11111111000            0      01234456889999999999999995     788875

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.92  E-value=5.7e-26  Score=154.46  Aligned_cols=123  Identities=17%  Similarity=0.159  Sum_probs=87.9

Q ss_pred             CccC--CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLD--EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~--~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++  .++.+||+|||+++.+....   ......||+.|+|||++.+..++.++||||+||++|+|++|..||..... 
T Consensus       155 Ill~~~~~~~vkL~DFG~a~~~~~~~---~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-  230 (350)
T d1koaa2         155 IMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-  230 (350)
T ss_dssp             EEESSTTSCCEEECCCTTCEECCTTS---CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-
T ss_pred             eeeccCCCCeEEEeecchheeccccc---ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH-
Confidence            4564  46899999999998874332   23346799999999999998899999999999999999999999965321 


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                       ......+...... ..          .   ......++.+.+++.+||..||++|||+.|+++
T Consensus       231 -~~~~~~i~~~~~~-~~----------~---~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         231 -DETLRNVKSCDWN-MD----------D---SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             -HHHHHHHHHTCCC-SC----------C---GGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             -HHHHHHHHhCCCC-CC----------c---ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             1111111111000 00          0   011134557889999999999999999999986

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.92  E-value=5.4e-26  Score=155.34  Aligned_cols=121  Identities=19%  Similarity=0.250  Sum_probs=87.6

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.+|.+||+|||+|+.+....    ....+||+.|+|||++.. ..++.++|+||+||++|+|++|..||......+
T Consensus       138 ILl~~~g~iKl~DFGla~~~~~~~----~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~  213 (364)
T d1omwa3         138 ILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD  213 (364)
T ss_dssp             EEECSSSCEEECCCTTCEECSSSC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC
T ss_pred             eEEcCCCcEEEeeeceeeecCCCc----ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH
Confidence            688999999999999998765332    233579999999998864 568999999999999999999999997543222


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll~  142 (159)
                      .  ............               ..+...++.+.+++.+||+.||.+|||     ++|+++
T Consensus       214 ~--~~~~~~~~~~~~---------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         214 K--HEIDRMTLTMAV---------------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             H--HHHHHHSSSCCC---------------CCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             H--HHHHHhcccCCC---------------CCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            1  111111111000               011134567899999999999999999     688874

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.92  E-value=8.4e-26  Score=153.74  Aligned_cols=123  Identities=18%  Similarity=0.158  Sum_probs=89.1

Q ss_pred             CccC--CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLD--EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~--~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++  .++.+||+|||+|..+....   ......||+.|+|||++.+..++.++||||+||++|+|++|..||......
T Consensus       158 ILl~~~~~~~vkL~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~  234 (352)
T d1koba_         158 IMCETKKASSVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL  234 (352)
T ss_dssp             EEESSTTCCCEEECCCTTCEECCTTS---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred             ccccccCCCeEEEeecccceecCCCC---ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence            4666  67899999999998875332   233456899999999999999999999999999999999999999653211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        .....+...... .             ........+..+.+++.+||+.||.+|||+.|+++
T Consensus       235 --~~~~~i~~~~~~-~-------------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         235 --ETLQNVKRCDWE-F-------------DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             --HHHHHHHHCCCC-C-------------CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             --HHHHHHHhCCCC-C-------------CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              111111111000 0             00011234567889999999999999999999985

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.6e-25  Score=150.00  Aligned_cols=138  Identities=20%  Similarity=0.197  Sum_probs=91.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++....   ........||+.|+|||++.+..++.++|+||+||++++|++|..||......+ 
T Consensus       147 ILi~~~~~~kl~dfg~~~~~~~---~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~-  222 (305)
T d1blxa_         147 ILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-  222 (305)
T ss_dssp             EEECTTCCEEECSCCSCCCCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-
T ss_pred             EEEcCCCCeeecchhhhhhhcc---cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHH-
Confidence            6889999999999999876532   223345679999999999999999999999999999999999999997542211 


Q ss_pred             cHHHHHHhhcCCc---ccch---hhhhc-cccc-hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           81 SLRDWVNKSLSGE---LTQV---IDANL-ARDE-QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~---~~~~---~~~~~-~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .+...........   +...   ..... .... ..........+.+.+++.+||+.||++|||+.|+++
T Consensus       223 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         223 QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             HHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            1111111100000   0000   00000 0000 000111234567888999999999999999999875

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.5e-25  Score=150.53  Aligned_cols=127  Identities=17%  Similarity=0.191  Sum_probs=87.7

Q ss_pred             CccCC---CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDE---DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.   .+.+||+|||+++.......   ....+||+.|+|||++.+..|+.++|+||+||++|+|++|..||.....
T Consensus       142 Ill~~~~~~~~~Kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~  218 (335)
T d2ozaa1         142 LLYTSKRPNAILKLTDFGFAKETTSHNS---LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG  218 (335)
T ss_dssp             EEESCSSTTCCEEECCCTTCEECCCCCC---CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTC
T ss_pred             cccccccccccccccccceeeeccCCCc---cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCH
Confidence            45553   56799999999987654332   2346799999999999998999999999999999999999999975322


Q ss_pred             ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ...  ...+...+.       .... .  .+.+.....++.+.+++.+||+.||++|||+.|+++
T Consensus       219 ~~~--~~~~~~~i~-------~~~~-~--~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         219 LAI--SPGMKTRIR-------MGQY-E--FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             C----------CCC-------SCSS-S--CCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHH--HHHHHHHHh-------cCCC-C--CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            111  000000000       0000 0  000111244567899999999999999999999975

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=6.4e-26  Score=154.24  Aligned_cols=117  Identities=18%  Similarity=0.149  Sum_probs=88.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+|+.....     .....||+.|+|||++.+..++.++|+||+||++|+|++|..||.....  .
T Consensus       172 ILl~~~g~ikL~DFG~a~~~~~~-----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~--~  244 (350)
T d1rdqe_         172 LLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--I  244 (350)
T ss_dssp             EEECTTSCEEECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--H
T ss_pred             cccCCCCCEEeeeceeeeecccc-----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCH--H
Confidence            68899999999999999886432     2235799999999999998999999999999999999999999965321  1


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                      .....+.....           .       .+...++.+.+++.+||+.||.+|+     |++++++
T Consensus       245 ~~~~~i~~~~~-----------~-------~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         245 QIYEKIVSGKV-----------R-------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHHHHCCC-----------C-------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHHhcCCC-----------C-------CCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            11111111100           0       0113456788999999999999994     8999985

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.8e-25  Score=148.01  Aligned_cols=123  Identities=16%  Similarity=0.165  Sum_probs=87.1

Q ss_pred             CccCCCC----ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782            1 ILLDEDM----VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF   76 (159)
Q Consensus         1 ili~~~~----~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~   76 (159)
                      ||++.++    .+|++|||++........   .....||+.|+|||++.+..++.++||||+||++|+|++|..||....
T Consensus       144 ill~~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~  220 (293)
T d1jksa_         144 IMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT  220 (293)
T ss_dssp             EEESCSSSSSCCEEECCCTTCEECTTSCB---CSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             EEEecCCCcccceEecchhhhhhcCCCcc---ccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCC
Confidence            4566555    599999999988743322   234568999999999998889999999999999999999999996532


Q ss_pred             cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ..  .....+..... ..             ....+...+..+.+++.+||+.||++|||+.|+++
T Consensus       221 ~~--~~~~~i~~~~~-~~-------------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         221 KQ--ETLANVSAVNY-EF-------------EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HH--HHHHHHHTTCC-CC-------------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HH--HHHHHHHhcCC-CC-------------CchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11  11111111000 00             00011234567889999999999999999999985

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=8.5e-26  Score=151.77  Aligned_cols=117  Identities=21%  Similarity=0.220  Sum_probs=87.7

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.+|.+||+|||+|+.....     ....+||+.|+|||++.+..++.++|+||+||++|+|++|..||......  
T Consensus       135 ILl~~~g~vkL~DFG~a~~~~~~-----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--  207 (316)
T d1fota_         135 ILLDKNGHIKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--  207 (316)
T ss_dssp             EEECTTSCEEECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--
T ss_pred             eeEcCCCCEEEecCccceEeccc-----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHH--
Confidence            68999999999999999886432     22367999999999999989999999999999999999999999653211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                      .....+..               ...   ..+...++.+.+++.+||..||.+|+     |++++++
T Consensus       208 ~~~~~i~~---------------~~~---~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         208 KTYEKILN---------------AEL---RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HHHHHHHH---------------CCC---CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHHHc---------------CCC---CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            11111110               000   00113345688999999999999996     8999874

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.7e-25  Score=148.50  Aligned_cols=138  Identities=20%  Similarity=0.216  Sum_probs=89.5

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||+++.......  .....+||+.|+|||++... .++.++||||+||++++|++|..||......+
T Consensus       131 Ili~~~~~~KL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~  208 (299)
T d1ua2a_         131 LLLDENGVLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD  208 (299)
T ss_dssp             EEECTTCCEEECCCGGGSTTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             EEecCCCccccccCccccccCCCcc--cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH
Confidence            6889999999999999987643222  22345789999999987654 57899999999999999999999987533211


Q ss_pred             ccHHHHHHhhcC-C---cccchhhh----hccccc--hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS-G---ELTQVIDA----NLARDE--QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~-~---~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ....+..... .   .+......    .....+  ..........+.+.+++.+||+.||++|||+.|+++
T Consensus       209 --~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         209 --QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             --HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             --HHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence              1111111110 0   00000000    000000  000111133467899999999999999999999985

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=5.9e-25  Score=146.81  Aligned_cols=131  Identities=14%  Similarity=0.046  Sum_probs=91.9

Q ss_pred             CCCceEEcccccceecCCCCCc-----ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            5 EDMVAHVSDFGISKLLGDGDDS-----VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         5 ~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      .+..+||+|||+|+.+......     .......||+.|+|||...+..++.++||||||++++++++|..||.......
T Consensus       141 ~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~  220 (299)
T d1ckia_         141 KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT  220 (299)
T ss_dssp             GTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC---
T ss_pred             CCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHH
Confidence            4567999999999987543321     12234579999999999999889999999999999999999999997643222


Q ss_pred             ccH--HHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782           80 MSL--RDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE  149 (159)
Q Consensus        80 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~  149 (159)
                      ...  .......            ...  ........+++.+.+++..||+.||++||++.++.+.|+.+..
T Consensus       221 ~~~~~~~~~~~~------------~~~--~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         221 KRQKYERISEKK------------MST--PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             ----HHHHHHHH------------HHS--CHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhccc------------CCC--ChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence            111  0100000            000  0000112455678999999999999999999999988887754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.91  E-value=2.3e-25  Score=147.31  Aligned_cols=132  Identities=20%  Similarity=0.324  Sum_probs=88.0

Q ss_pred             CccCCCCceEEcccccceecCCCCC-cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++..+++|||.+........ .......+||+.|+|||++.+..++.++||||+|+++|+|++|..||.......
T Consensus       142 Ill~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~  221 (277)
T d1o6ya_         142 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS  221 (277)
T ss_dssp             EEEETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             cccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHH
Confidence            5788999999999999876533221 223344679999999999998889999999999999999999999997532111


Q ss_pred             ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-cHHHHHHHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-YMTDAAAKLKKIK  148 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-t~~~ll~~l~~~~  148 (159)
                      . ..........               .........++.+.+++.+||+.||++|| |++++++.|.++.
T Consensus       222 ~-~~~~~~~~~~---------------~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         222 V-AYQHVREDPI---------------PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             H-HHHHHHCCCC---------------CGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             H-HHHHHhcCCC---------------CCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            1 0011110000               00011123456789999999999999999 8999999998875

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.3e-25  Score=151.12  Aligned_cols=119  Identities=25%  Similarity=0.282  Sum_probs=88.0

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+||+|||+++......  ...+...||+.|+|||++.+..++.++|+||+||++|+|++|..||......  
T Consensus       134 iL~~~~~~~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~--  209 (320)
T d1xjda_         134 ILLDKDGHIKIADFGMCKENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--  209 (320)
T ss_dssp             EEECTTSCEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred             eeecCCCceeccccchhhhccccc--ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH--
Confidence            688999999999999998654322  2234467999999999999999999999999999999999999999753211  


Q ss_pred             cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH-HHH
Q 035782           81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT-DAA  141 (159)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~-~ll  141 (159)
                      .....+....               +   ..+...+..+.+++.+||..||++|||+. +++
T Consensus       210 ~~~~~i~~~~---------------~---~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         210 ELFHSIRMDN---------------P---FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  253 (320)
T ss_dssp             HHHHHHHHCC---------------C---CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HHHHHHHcCC---------------C---CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHH
Confidence            1111111100               0   00113455688999999999999999985 675

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.5e-25  Score=146.81  Aligned_cols=112  Identities=23%  Similarity=0.244  Sum_probs=83.2

Q ss_pred             CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++. ++.+||+|||+|+.....    ..+...||+.|+|||++.+..+ +.++||||+||++|+|++|..||....  
T Consensus       141 Ill~~~~~~vkl~DFG~a~~~~~~----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--  214 (273)
T d1xwsa_         141 ILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--  214 (273)
T ss_dssp             EEEETTTTEEEECCCTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--
T ss_pred             eEEecCCCeEEECccccceecccc----cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch--
Confidence            56774 579999999999875422    2334679999999999877654 677999999999999999999986421  


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                           .....            ....       +...+..+.+++.+||+.||++|||+.|+++
T Consensus       215 -----~i~~~------------~~~~-------~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         215 -----EIIRG------------QVFF-------RQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             -----HHHHC------------CCCC-------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -----HHhhc------------ccCC-------CCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                 00000            0000       0123456889999999999999999999985

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.90  E-value=1.3e-24  Score=143.54  Aligned_cols=123  Identities=23%  Similarity=0.237  Sum_probs=87.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC------CccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE------GIVSTKCDVYSYGVLLMETFTRKKPTDE   74 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~------~~~~~~~dv~s~g~~~~~~~~~~~p~~~   74 (159)
                      ||++.++.+||+|||+++......   ......||+.|++||.+.+      ..++.++|+||+|+++++|++|..||..
T Consensus       141 ill~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~  217 (277)
T d1phka_         141 ILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH  217 (277)
T ss_dssp             EEECTTCCEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EEEcCCCCeEEccchheeEccCCC---ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCC
Confidence            578999999999999998875322   2233569999999997643      3467899999999999999999999975


Q ss_pred             cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .....  ....+...   ..+           ...+.....++.+.+++.+||+.||++|||+.|+++
T Consensus       218 ~~~~~--~~~~i~~~---~~~-----------~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         218 RKQML--MLRMIMSG---NYQ-----------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             SSHHH--HHHHHHHT---CCC-----------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCHHH--HHHHHHhC---CCC-----------CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            42211  11111110   000           000111245568999999999999999999999874

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.90  E-value=4.5e-24  Score=142.07  Aligned_cols=133  Identities=13%  Similarity=0.035  Sum_probs=93.6

Q ss_pred             CCceEEcccccceecCCCCCc-----ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            6 DMVAHVSDFGISKLLGDGDDS-----VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         6 ~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ++.+||+|||+|+.+......     ......+||+.|+|||++.+..++.++|+||+|++++++++|..||........
T Consensus       142 ~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~  221 (293)
T d1csna_         142 ANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN  221 (293)
T ss_dssp             TTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH
T ss_pred             CCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhH
Confidence            578999999999986533221     123345799999999999998899999999999999999999999975433221


Q ss_pred             cH-HHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782           81 SL-RDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF  151 (159)
Q Consensus        81 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~  151 (159)
                      .. ...+....           ...  .........++.+.+++..||..+|++||+.+.+.+.|+++.++.
T Consensus       222 ~~~~~~i~~~~-----------~~~--~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~  280 (293)
T d1csna_         222 KQKYERIGEKK-----------QST--PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  280 (293)
T ss_dssp             HHHHHHHHHHH-----------HHS--CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcc-----------CCC--ChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence            11 01110000           000  000011234567899999999999999999999998888887654

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.2e-23  Score=141.51  Aligned_cols=140  Identities=20%  Similarity=0.204  Sum_probs=88.4

Q ss_pred             CccCCCCceEEcccccceecCCCCCc--ccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDS--VTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFI   77 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~   77 (159)
                      ||++.++.+||+|||+++.+......  ......+||+.|+|||++.+. .++.++|+||+||+++++++|+.||.....
T Consensus       148 ILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~  227 (318)
T d3blha1         148 VLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE  227 (318)
T ss_dssp             EEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             eeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCH
Confidence            68899999999999999876532221  122335699999999987765 688999999999999999999999975322


Q ss_pred             ccccHHHHHHhhcC---Cc-ccchhh----hhc------cccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           78 GEMSLRDWVNKSLS---GE-LTQVID----ANL------ARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        78 ~~~~~~~~~~~~~~---~~-~~~~~~----~~~------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      .  .....+.....   .. ......    ...      ..............+.+.+++.+||+.||++|||+.|+++
T Consensus       228 ~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         228 Q--HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             H--HHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             H--HHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence            1  11111111111   00 000000    000      0000111111122456778999999999999999999984

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9e-24  Score=140.95  Aligned_cols=139  Identities=21%  Similarity=0.150  Sum_probs=88.8

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc-cccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI-VSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||.|+......  .......||+.|+|||...... ++.++|+||+|+++|+|++|..||......+
T Consensus       133 Il~~~~~~~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~  210 (298)
T d1gz8a_         133 LLINTEGAIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID  210 (298)
T ss_dssp             EEECTTSCEEECSTTHHHHHCCCS--BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             eeecccCcceeccCCcceeccCCc--ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH
Confidence            688999999999999998764322  2233457999999999876654 5789999999999999999999997532211


Q ss_pred             ccHHHHHHhhcC---Ccccchhh-hhccc------cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS---GELTQVID-ANLAR------DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~---~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      . ..........   ..+..... .....      ..............+.+++.+||+.||.+|||+.|+++
T Consensus       211 ~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         211 Q-LFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             H-HHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             H-HHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            1 1111111100   00000000 00000      00000011123457889999999999999999999986

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=8.1e-24  Score=144.04  Aligned_cols=137  Identities=20%  Similarity=0.186  Sum_probs=88.1

Q ss_pred             CccCCCC-ceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDM-VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++.++ .+||+|||++..+.....   ....+|++.|+|||.+.+ ..++.++||||+||+++++++|..||......
T Consensus       153 ILl~~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~  229 (350)
T d1q5ka_         153 LLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV  229 (350)
T ss_dssp             EEECTTTCCEEECCCTTCEECCTTSC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH
T ss_pred             EEEecCCCceeEecccchhhccCCcc---cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH
Confidence            5788665 899999999987643322   233568999999998665 46899999999999999999999999753321


Q ss_pred             cccHHHH-----------HHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDW-----------VNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      +. +...           ....... .....-+.....+..........+.+.+++.+||..||.+|||+.|+++
T Consensus       230 ~~-l~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         230 DQ-LVEIIKVLGTPTREQIREMNPN-YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             HH-HHHHHHHHCCCCHHHHHHHCC----CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HH-HHHHHHHhCCChHHhhhhhccc-hhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11 1111           1111000 0000000011111111112234567889999999999999999999985

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.7e-23  Score=139.82  Aligned_cols=123  Identities=17%  Similarity=0.221  Sum_probs=86.7

Q ss_pred             CccC--CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLD--EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~--~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++  ..+.+||+|||+++......   ......+|+.|++||...+..++.++|+||+||++|+|++|..||......
T Consensus       133 Ill~~~~~~~ikl~DFG~~~~~~~~~---~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~  209 (321)
T d1tkia_         133 IIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ  209 (321)
T ss_dssp             EEESSSSCCCEEECCCTTCEECCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             eeecCCCceEEEEcccchhhccccCC---cccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH
Confidence            4666  34589999999998764322   233356899999999999989999999999999999999999999653211


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        .....+...           ....   ........+..+.+++.+||..||.+|||+.|+++
T Consensus       210 --~~~~~i~~~-----------~~~~---~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         210 --QIIENIMNA-----------EYTF---DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             --HHHHHHHHT-----------CCCC---CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --HHHHHHHhC-----------CCCC---ChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              111111110           0000   00011133456889999999999999999999986

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.2e-23  Score=140.22  Aligned_cols=141  Identities=18%  Similarity=0.129  Sum_probs=89.0

Q ss_pred             CccCCCCceEEcccccceecCCCCC-cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||+++++.+||+|||++........ .......+||+.|+|||++... .++.++|+||+|+++++|++|..||......
T Consensus       140 ILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~  219 (345)
T d1pmea_         140 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL  219 (345)
T ss_dssp             EEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             EEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHH
Confidence            6899999999999999987643222 1223446799999999987554 5788999999999999999999999754322


Q ss_pred             cccHHHHHHhhcCCccc-----------chhhhhccccc-hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELT-----------QVIDANLARDE-QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      +...... .........           ........... ............+.+++.+||+.||.+|||+.|+++
T Consensus       220 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~  294 (345)
T d1pmea_         220 DQLNHIL-GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  294 (345)
T ss_dssp             HHHHHHH-HHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHh-hhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            2111100 000000000           00000000000 000011122356889999999999999999999985

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.88  E-value=1.6e-23  Score=138.96  Aligned_cols=139  Identities=19%  Similarity=0.171  Sum_probs=86.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+|++|||.+........  ......|++.|++||.+.+. .++.++|+||+|++++++++|+.||......+
T Consensus       131 Ill~~~~~~kl~DfG~a~~~~~~~~--~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~  208 (286)
T d1ob3a_         131 LLINREGELKIADFGLARAFGIPVR--KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD  208 (286)
T ss_dssp             EEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             eeEcCCCCEEecccccceecccCcc--ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHH
Confidence            6889999999999999987643222  22334688999999987654 56899999999999999999999997543221


Q ss_pred             ccHHHHHHhhcC---Ccccchhh-----hhcc--ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS---GELTQVID-----ANLA--RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~---~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      . ..........   ..+.....     ....  ...............+.+++.+||+.||.+|||++|+++
T Consensus       209 ~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         209 Q-LMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             H-HHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             H-HHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1 1111111000   11111000     0000  000000111233467889999999999999999999974

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.8e-23  Score=139.81  Aligned_cols=125  Identities=23%  Similarity=0.249  Sum_probs=87.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++.++.+||+|||+++.+...... ......|++.|++||.+.+.  .++.++||||+||++|+|++|..||......
T Consensus       160 ill~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~  238 (322)
T d1vzoa_         160 ILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK  238 (322)
T ss_dssp             EEECTTSCEEESCSSEEEECCGGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC
T ss_pred             eeecCCCCEEEeeccchhhhcccccc-cccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence            57899999999999999876432222 23345789999999987654  4678899999999999999999999764332


Q ss_pred             cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782           79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA  142 (159)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~  142 (159)
                      ..... .....            ....+   ..+...+..+.+++.+||+.||.+||     |++|+++
T Consensus       239 ~~~~~-i~~~~------------~~~~~---~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         239 NSQAE-ISRRI------------LKSEP---PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             CCHHH-HHHHH------------HHCCC---CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             HHHHH-HHHhc------------ccCCC---CCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            21111 11100            00000   01224567899999999999999999     4788874

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2e-22  Score=136.98  Aligned_cols=136  Identities=18%  Similarity=0.157  Sum_probs=88.1

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+|++|||+|+.....     .+...||+.|+|||++.+. .++.++|+||+||++++|++|..||.......
T Consensus       152 IL~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~  226 (346)
T d1cm8a_         152 LAVNEDCELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD  226 (346)
T ss_dssp             EEECTTCCEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             hhcccccccccccccceeccCCc-----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHH
Confidence            68899999999999999876432     2345689999999987654 56889999999999999999999997542211


Q ss_pred             ccHHHHHHhhcCC----------cccchhhhhcccc--chhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSG----------ELTQVIDANLARD--EQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      . +..........          .........+...  ...........+.+.+++.+||..||++|||+.|+++
T Consensus       227 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~  300 (346)
T d1cm8a_         227 Q-LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  300 (346)
T ss_dssp             H-HHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             H-HHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            1 11111000000          0000000000000  0000111234456889999999999999999999985

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7.5e-22  Score=134.49  Aligned_cols=138  Identities=17%  Similarity=0.115  Sum_probs=83.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM   80 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~   80 (159)
                      ||++.++.+|++|||+++......   ..+..++|+.|+|||++.+..++.++|+||+||+++++++|..||........
T Consensus       150 il~~~~~~~kl~df~~~~~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~  226 (355)
T d2b1pa1         150 IVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ  226 (355)
T ss_dssp             EEECTTCCEEECCCCC------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             cccccccceeeechhhhhcccccc---ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHH
Confidence            578889999999999987764322   23345689999999999998999999999999999999999999965321111


Q ss_pred             cHHHHHHhhc----------CCcccchhhhh-----------cc--ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782           81 SLRDWVNKSL----------SGELTQVIDAN-----------LA--RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM  137 (159)
Q Consensus        81 ~~~~~~~~~~----------~~~~~~~~~~~-----------~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  137 (159)
                       .........          ...........           ..  ...............+.+++.+||..||++|||+
T Consensus       227 -~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta  305 (355)
T d2b1pa1         227 -WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV  305 (355)
T ss_dssp             -HHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCH
T ss_pred             -HHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCH
Confidence             000000000          00000000000           00  0001111223456778999999999999999999


Q ss_pred             HHHHH
Q 035782          138 TDAAA  142 (159)
Q Consensus       138 ~~ll~  142 (159)
                      +|+++
T Consensus       306 ~elL~  310 (355)
T d2b1pa1         306 DDALQ  310 (355)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            99983

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.85  E-value=3.8e-22  Score=134.63  Aligned_cols=139  Identities=14%  Similarity=0.174  Sum_probs=87.6

Q ss_pred             CccCCC-CceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782            1 ILLDED-MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG   78 (159)
Q Consensus         1 ili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~   78 (159)
                      ||++.+ +.+||+|||+|+.......   ....++|+.|+|||.+.+. .++.++|+||+||+++++++|..||......
T Consensus       160 ILi~~~~~~vkl~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~  236 (328)
T d3bqca1         160 VMIDHEHRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  236 (328)
T ss_dssp             EEEETTTTEEEECCGGGCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             eEEcCCCCeeeecccccceeccCCCc---ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchh
Confidence            577755 4699999999987653322   3345689999999987765 5789999999999999999999998653322


Q ss_pred             cccH------------HHHHHhhcCCc---ccchhhhhcccc---chhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHH
Q 035782           79 EMSL------------RDWVNKSLSGE---LTQVIDANLARD---EQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDA  140 (159)
Q Consensus        79 ~~~~------------~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~l  140 (159)
                      ....            ..+........   ............   ...........+.+.+++.+||+.||.+|||++|+
T Consensus       237 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~  316 (328)
T d3bqca1         237 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA  316 (328)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            1110            01111110000   000000000000   00001112345678899999999999999999999


Q ss_pred             HH
Q 035782          141 AA  142 (159)
Q Consensus       141 l~  142 (159)
                      ++
T Consensus       317 L~  318 (328)
T d3bqca1         317 ME  318 (328)
T ss_dssp             HT
T ss_pred             hc
Confidence            85

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6e-22  Score=131.63  Aligned_cols=140  Identities=16%  Similarity=0.120  Sum_probs=88.2

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc-cccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI-VSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.++.+||+|||.++........  .....+++.|.|||.+.+.. ++.++|+||+||++++|++|..||.......
T Consensus       132 Ili~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~  209 (292)
T d1unla_         132 LLINRNGELKLANFGLARAFGIPVRC--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  209 (292)
T ss_dssp             EEECTTCCEEECCCTTCEECCSCCSC--CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHH
T ss_pred             cccccCCceeeeecchhhcccCCCcc--ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHH
Confidence            57888999999999999887533322  22345678899999877664 6899999999999999999999874322222


Q ss_pred             ccHHHHHHhhcC---Ccccchhh---h----hccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLS---GELTQVID---A----NLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~---~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                      ............   ..+.....   .    ................+.+.+++.+||+.||.+|||++|+++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         210 DQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111111111110   01110000   0    000000111112234567889999999999999999999875

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=8.6e-21  Score=128.90  Aligned_cols=135  Identities=19%  Similarity=0.156  Sum_probs=83.3

Q ss_pred             CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782            1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE   79 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~   79 (159)
                      ||++.+|.+|++|||++.....     ......|++.|+|||...+. .++.++|+||+|+++++|++|..||.......
T Consensus       152 ILi~~~~~~kl~dfg~a~~~~~-----~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~  226 (348)
T d2gfsa1         152 LAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID  226 (348)
T ss_dssp             EEECTTCCEEECCC----CCTG-----GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             ccccccccccccccchhcccCc-----ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHH
Confidence            5889999999999999876432     22345689999999986655 56889999999999999999999996532111


Q ss_pred             ccHHHHHHhhcCCcccchh------------hhhcc-ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782           80 MSLRDWVNKSLSGELTQVI------------DANLA-RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA  142 (159)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~------------~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~  142 (159)
                        ....+............            ..... +............+.+.+++.+||..||.+|||+.|+++
T Consensus       227 --~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         227 --QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             --HHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --HHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence              11111111100000000            00000 000000011234567889999999999999999999985

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=9.2e-21  Score=129.31  Aligned_cols=129  Identities=14%  Similarity=0.110  Sum_probs=81.0

Q ss_pred             ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc-cc----H
Q 035782            8 VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE-MS----L   82 (159)
Q Consensus         8 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~-~~----~   82 (159)
                      .+|++|||.+......     .....||+.|+|||++....++.++|+||+|++++++++|+.||....... ..    .
T Consensus       170 ~~kl~dfg~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~  244 (362)
T d1q8ya_         170 QIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI  244 (362)
T ss_dssp             EEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred             eeeEeecccccccccc-----cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHH
Confidence            4899999999875322     233569999999999888889999999999999999999999987432111 00    0


Q ss_pred             HHHHHhhcCCcccchhh---------------hhccc---c------chhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782           83 RDWVNKSLSGELTQVID---------------ANLAR---D------EQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT  138 (159)
Q Consensus        83 ~~~~~~~~~~~~~~~~~---------------~~~~~---~------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  138 (159)
                      ...... ..........               ..+..   .      .............+.+++.+||+.||.+|||+.
T Consensus       245 ~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~  323 (362)
T d1q8ya_         245 AQIIEL-LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG  323 (362)
T ss_dssp             HHHHHH-HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred             HHHHHH-hCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHH
Confidence            010000 0000000000               00000   0      001111245677899999999999999999999


Q ss_pred             HHHH
Q 035782          139 DAAA  142 (159)
Q Consensus       139 ~ll~  142 (159)
                      |+++
T Consensus       324 e~L~  327 (362)
T d1q8ya_         324 GLVN  327 (362)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            9975

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.33  E-value=0.063  Score=31.84  Aligned_cols=20  Identities=30%  Similarity=0.441  Sum_probs=15.1

Q ss_pred             CccCCCCceEEcccccceecC
Q 035782            1 ILLDEDMVAHVSDFGISKLLG   21 (159)
Q Consensus         1 ili~~~~~~kl~Dfg~~~~~~   21 (159)
                      ||++++ .++|+|||.|....
T Consensus       134 ILv~~~-~~~liDFG~a~~~~  153 (191)
T d1zara2         134 VLVSEE-GIWIIDFPQSVEVG  153 (191)
T ss_dssp             EEEETT-EEEECCCTTCEETT
T ss_pred             eeeeCC-CEEEEECCCcccCC
Confidence            466655 48999999997764