Citrus Sinensis ID: 035820


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380--
MESSSSTVLFLPSPVELQGQRDHCGVSLVDSSLWQKQTNLPVEFTWSKGDLVSSHGELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQVGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDFTWSDLLEFTQKHYRSDYATLENFTKWLLTSKPTAKF
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHcccccccEEEECcccccccccccccEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccCEEEEccccccccccccccccccccccccEEEEccccccEEEEEccEEEECccccccEEEEEHHHHHHHccccccccccEEEEcccccEEEEEEEEccccccCEEccccccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHccccccc
************************GVSLVDSSLWQKQTNLPVEFTWSKGDLVSSHGELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQVGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDFTWSDLLEFTQKHYRSDYATLENFTKWLLT*******
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MESSSSTVLFLPSPVELQGQRDHCGVSLVDSSLWQKQTNLPVEFTWSKGDLVSSHGELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQVGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDFTWSDLLEFTQKHYRSDYATLENFTKWLLTSKPTAKF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Gibberellin 20 oxidase 2 Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA12 and GA53 to GA9 and GA20 respectively, via a three-step oxidation at C-20 of the GA skeleton. GA53 is less effectively oxidized than GA12, and GA25 is also formed as a minor product.probableQ39111
Gibberellin 20 oxidase 2 Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA53 to GA20 via a three-step oxidation at C-20 of the GA skeleton.probableQ0JH50
Gibberellin 20 oxidase 2 Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA53 to GA20 via a three-step oxidation at C-20 of the GA skeleton.probableP0C5H5

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1W9Y, chain A
Confidence level:very confident
Coverage over the Query: 59-368
View the alignment between query and template
View the model in PyMOL
Template: 1GP6, chain A
Confidence level:very confident
Coverage over the Query: 28-364
View the alignment between query and template
View the model in PyMOL